-
1
-
-
4043175756
-
The X-ray structure of the papillomavirus helicase in complex with its molecular matchmaker E2
-
Abbate, E.A., Berger, J.M., and Botchan, M.R. 2004. The X-ray structure of the papillomavirus helicase in complex with its molecular matchmaker E2. Genes Dev 18:1981-1996.
-
(2004)
Genes Dev
, vol.18
, pp. 1981-1996
-
-
Abbate, E.A.1
Berger, J.M.2
Botchan, M.R.3
-
2
-
-
34547100313
-
Structure and function of DNAA N-terminal domains: Specific sites and mechanisms in inter-DNAA interaction and in DNAB helicase loading on oriC
-
Abe, Y., Jo, T., Matsuda, Y., Matsunaga, C., Katayama, T., and Ueda, T. 2007. Structure and function of DNAA N-terminal domains: Specific sites and mechanisms in inter-DNAA interaction and in DNAB helicase loading on oriC. J Biol Chem 282:17816-27.
-
(2007)
J Biol Chem
, vol.282
, pp. 17816-17827
-
-
Abe, Y.1
Jo, T.2
Matsuda, Y.3
Matsunaga, C.4
Katayama, T.5
Ueda, T.6
-
3
-
-
0037160068
-
Characterization of simian virus 40 T-antigen double hexamers bound to a replication fork. The active form of the helicase
-
Alexandrov, A.I., Botchan, M.R., and Cozzarelli, N.R. 2002. Characterization of simian virus 40 T-antigen double hexamers bound to a replication fork. The active form of the helicase. J Biol Chem 277:44886-44897.
-
(2002)
J Biol Chem
, vol.277
, pp. 44886-44897
-
-
Alexandrov, A.I.1
Botchan, M.R.2
Cozzarelli, N.R.3
-
4
-
-
0034691115
-
Identification of domains of the HPV11 E1 protein required for DNA replication in vitro
-
Amin, A.A., Titolo, S., Pelletier, A., Fink, D., Cordingley, M.G., and Archambault, J. 2000. Identification of domains of the HPV11 E1 protein required for DNA replication in vitro. Virology 272:137-150.
-
(2000)
Virology
, vol.272
, pp. 137-150
-
-
Amin, A.A.1
Titolo, S.2
Pelletier, A.3
Fink, D.4
Cordingley, M.G.5
Archambault, J.6
-
5
-
-
0030886099
-
Components and dynamics of DNA replication complexes in S. cerevisiae: Redistribution of MCM proteins and Cdc45p during S phase
-
Aparicio, O.M., Weinstein, D.M., and Bell, S.P. 1997. Components and dynamics of DNA replication complexes in S. cerevisiae: redistribution of MCM proteins and Cdc45p during S phase. Cell 91:59-69.
-
(1997)
Cell
, vol.91
, pp. 59-69
-
-
Aparicio, O.M.1
Weinstein, D.M.2
Bell, S.P.3
-
6
-
-
33744958175
-
Membrane-catalyzed nucleotide exchange on DnaA. Effect of surface molecular crowding
-
Aranovich, A., Gdalevsky, G.Y., Cohen-Luria, R., Fishov, I., and Parola, A.H. 2006. Membrane-catalyzed nucleotide exchange on DnaA. Effect of surface molecular crowding. J Biol Chem 281:12526-12534.
-
(2006)
J Biol Chem
, vol.281
, pp. 12526-12534
-
-
Aranovich, A.1
Gdalevsky, G.Y.2
Cohen-Luria, R.3
Fishov, I.4
Parola, A.H.5
-
7
-
-
0023908688
-
Expression of simian virus 40 T antigen in Escherichia coli: Localization of T-antigen origin DNA-binding domain to within 129 amino acids
-
Arthur, A.K., Hoss, A., and Fanning, E. 1988. Expression of simian virus 40 T antigen in Escherichia coli: localization of T-antigen origin DNA-binding domain to within 129 amino acids. J Virol 62:1999-2006.
-
(1988)
J Virol
, vol.62
, pp. 1999-2006
-
-
Arthur, A.K.1
Hoss, A.2
Fanning, E.3
-
8
-
-
0021783083
-
Autoregulation of the dnaA gene of Escherichia coli K12
-
Atlung, T., Clausen, E.S., and Hansen, F.G. 1985. Autoregulation of the dnaA gene of Escherichia coli K12. Mol Gen Genet 200:442-450.
-
(1985)
Mol Gen Genet
, vol.200
, pp. 442-450
-
-
Atlung, T.1
Clausen, E.S.2
Hansen, F.G.3
-
10
-
-
0035997368
-
DNA replication in eukaryotic cells
-
Bell, S.P., and Dutta, A. 2002. DNA replication in eukaryotic cells. Annu Rev Biochem 71:333-374.
-
(2002)
Annu Rev Biochem
, vol.71
, pp. 333-374
-
-
Bell, S.P.1
Dutta, A.2
-
11
-
-
0028832366
-
The multidomain structure of Orc1p reveals similarity to regulators of DNA replication and transcriptional silencing
-
Bell, S.P., Mitchell, J., Leber, J., Kobayashi, R., and Stillman, B. 1995. The multidomain structure of Orc1p reveals similarity to regulators of DNA replication and transcriptional silencing. Cell 83:563-568.
-
(1995)
Cell
, vol.83
, pp. 563-568
-
-
Bell, S.P.1
Mitchell, J.2
Leber, J.3
Kobayashi, R.4
Stillman, B.5
-
12
-
-
0026607331
-
ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex
-
Bell, S.P., and Stillman, B. 1992. ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex. Nature 357:128-134.
-
(1992)
Nature
, vol.357
, pp. 128-134
-
-
Bell, S.P.1
Stillman, B.2
-
13
-
-
0141960376
-
An archaeal chromosomal autonomously replicating sequence element from an extreme halophile, Halobacterium sp. strain NRC-1
-
Berquist, B.R., and DasSarma, S. 2003. An archaeal chromosomal autonomously replicating sequence element from an extreme halophile, Halobacterium sp. strain NRC-1. J Bacteriol 185:5959-5966.
-
(2003)
J Bacteriol
, vol.185
, pp. 5959-5966
-
-
Berquist, B.R.1
DasSarma, S.2
-
14
-
-
0025019702
-
Binding and unwinding - how T antigen engages the SV40 origin of DNA replication
-
Borowiec, J.A., Dean, F.B., Bullock, P.A., and Hurwitz, J. 1990. Binding and unwinding - how T antigen engages the SV40 origin of DNA replication. Cell 60:181-184.
-
(1990)
Cell
, vol.60
, pp. 181-184
-
-
Borowiec, J.A.1
Dean, F.B.2
Bullock, P.A.3
Hurwitz, J.4
-
15
-
-
0024095899
-
Localized melting and structural changes in the SV40 origin of replication induced by T-antigen
-
Borowiec, J.A., and Hurwitz, J. 1988. Localized melting and structural changes in the SV40 origin of replication induced by T-antigen. EMBO J 7:3149-3158.
-
(1988)
EMBO J
, vol.7
, pp. 3149-3158
-
-
Borowiec, J.A.1
Hurwitz, J.2
-
16
-
-
10944235448
-
ATP hydrolysis by ORC catalyzes reiterative Mcm2-7 assembly at a defined origin of replication
-
Bowers, J.L., Randell, J.C., Chen, S., and Bell, S.P. 2004. ATP hydrolysis by ORC catalyzes reiterative Mcm2-7 assembly at a defined origin of replication. Mol Cell 16:967-978.
-
(2004)
Mol Cell
, vol.16
, pp. 967-978
-
-
Bowers, J.L.1
Randell, J.C.2
Chen, S.3
Bell, S.P.4
-
17
-
-
3042588011
-
Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex
-
Bowman, G.D., O'Donnell, M., and Kuriyan, J. 2004. Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex. Nature 429:724-730.
-
(2004)
Nature
, vol.429
, pp. 724-730
-
-
Bowman, G.D.1
O'Donnell, M.2
Kuriyan, J.3
-
18
-
-
0029998531
-
Coordinating DNA replication initiation with cell growth: Differential roles for DnaA and SeqA proteins
-
Boye, E., Stokke, T., Kleckner, N., and Skarstad, K. 1996. Coordinating DNA replication initiation with cell growth: differential roles for DnaA and SeqA proteins. Proc Natl Acad Sci USA 93:12206-12211.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 12206-12211
-
-
Boye, E.1
Stokke, T.2
Kleckner, N.3
Skarstad, K.4
-
19
-
-
0024284091
-
Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome
-
Bramhill, D., and Kornberg, A. 1988. Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome. Cell 52:743-755.
-
(1988)
Cell
, vol.52
, pp. 743-755
-
-
Bramhill, D.1
Kornberg, A.2
-
20
-
-
0021967323
-
Autoregulation of the DNA replication gene dnaA in E. coli K-12
-
Braun, R.E., O'Day, K., and Wright, A. 1985. Autoregulation of the DNA replication gene dnaA in E. coli K-12. Cell 40:159-169.
-
(1985)
Cell
, vol.40
, pp. 159-169
-
-
Braun, R.E.1
O'Day, K.2
Wright, A.3
-
21
-
-
0023646792
-
The localization of replication origins on ARS plasmids in S. cerevisiae
-
Brewer, B.J., and Fangman, W.L. 1987. The localization of replication origins on ARS plasmids in S. cerevisiae. Cell 51:463-471.
-
(1987)
Cell
, vol.51
, pp. 463-471
-
-
Brewer, B.J.1
Fangman, W.L.2
-
22
-
-
0031405599
-
The initiation of simian virus 40 DNA replication in vitro
-
Bullock, P.A. 1997. The initiation of simian virus 40 DNA replication in vitro. Crit Rev Biochem Mol Biol 32:503-568.
-
(1997)
Crit Rev Biochem Mol Biol
, vol.32
, pp. 503-568
-
-
Bullock, P.A.1
-
23
-
-
16044367245
-
Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
-
Bult, C. 1996. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273:1058-1073.
-
(1996)
Science
, vol.273
, pp. 1058-1073
-
-
Bult, C.1
-
24
-
-
0037628613
-
Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein
-
Camara, J.E., Skarstad, K., and Crooke, E. 2003. Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein. J Bacteriol 185:3244-3248.
-
(2003)
J Bacteriol
, vol.185
, pp. 3244-3248
-
-
Camara, J.E.1
Skarstad, K.2
Crooke, E.3
-
25
-
-
4444381255
-
Biochemical characterization of Cdc6/Orc1 binding to the replication origin of the euryarchaeon Methanothermobacter thermoautotrophicus
-
Capaldi, S.A., and Berger, J.M. 2004. Biochemical characterization of Cdc6/Orc1 binding to the replication origin of the euryarchaeon Methanothermobacter thermoautotrophicus. Nucleic Acids Res 32:4821-4832.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 4821-4832
-
-
Capaldi, S.A.1
Berger, J.M.2
-
27
-
-
33745171108
-
Common determinants in DNA melting and helicase-catalysed DNA unwinding by papillomavirus replication protein E1
-
Castella, S., Bingham, G., and Sanders, C.M. 2006a. Common determinants in DNA melting and helicase-catalysed DNA unwinding by papillomavirus replication protein E1. Nucleic Acids Res 34:3008-3019.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3008-3019
-
-
Castella, S.1
Bingham, G.2
Sanders, C.M.3
-
28
-
-
33748749364
-
Role of ATP hydrolysis in the DNA translocase activity of the bovine papillomavirus (BPV-1) E1 helicase
-
Castella, S., Burgin, D., and Sanders, C.M. 2006b. Role of ATP hydrolysis in the DNA translocase activity of the bovine papillomavirus (BPV-1) E1 helicase. Nucleic Acids Res 34:3731-3741.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3731-3741
-
-
Castella, S.1
Burgin, D.2
Sanders, C.M.3
-
29
-
-
0020338575
-
Purification of the E. coli dnaA gene product
-
Chakraborty, T., Yoshinaga, K., Lother, H., and Messer, W. 1982. Purification of the E. coli dnaA gene product. EMBO J 1:1545-1549.
-
(1982)
EMBO J
, vol.1
, pp. 1545-1549
-
-
Chakraborty, T.1
Yoshinaga, K.2
Lother, H.3
Messer, W.4
-
30
-
-
0036837673
-
Sequential and ordered assembly of E1 initiator complexes on the papillomavirus origin of DNA replication generates progressive structural changes related to melting
-
Chen, G., and Stenlund, A. 2002. Sequential and ordered assembly of E1 initiator complexes on the papillomavirus origin of DNA replication generates progressive structural changes related to melting. Mol Cell Biol 22:7712-7720.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 7712-7720
-
-
Chen, G.1
Stenlund, A.2
-
31
-
-
0031897963
-
Characterization of the DNA-binding domain of the bovine papillomavirus replication initiator E1
-
Chen G., and Stenlund, A. 1998. Characterization of the DNA-binding domain of the bovine papillomavirus replication initiator E1. J. Virol 72:2567-2576.
-
(1998)
J. Virol
, vol.72
, pp. 2567-2576
-
-
Chen, G.1
Stenlund, A.2
-
32
-
-
12544250854
-
Structural polymorphism of Methanothermobacter thermautotrophicus MCM
-
Chen, Y.J., Yu, X., Kasiviswanathan, R., Shin, J.H., Kelman, Z., and Egelman, E.H. 2005. Structural polymorphism of Methanothermobacter thermautotrophicus MCM. J Mol Biol 346:389-394.
-
(2005)
J Mol Biol
, vol.346
, pp. 389-394
-
-
Chen, Y.J.1
Yu, X.2
Kasiviswanathan, R.3
Shin, J.H.4
Kelman, Z.5
Egelman, E.H.6
-
33
-
-
0033563102
-
Assembly of functionally active Drosophila origin recognition complex from recombinant proteins
-
Chesnokov, I., Gossen, M., Remus, D., and Botchan, M. 1999. Assembly of functionally active Drosophila origin recognition complex from recombinant proteins. Genes Dev 13:1289-1296.
-
(1999)
Genes Dev
, vol.13
, pp. 1289-1296
-
-
Chesnokov, I.1
Gossen, M.2
Remus, D.3
Botchan, M.4
-
34
-
-
0034652354
-
A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase
-
Chong, J.P., Hayashi, M.K., Simon, M.N., Xu, R.M., and Stillman, B. 2000. A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase. Proc Natl Acad Sci USA 97:1530-1535.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 1530-1535
-
-
Chong, J.P.1
Hayashi, M.K.2
Simon, M.N.3
Xu, R.M.4
Stillman, B.5
-
35
-
-
33746800642
-
Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex
-
Clarey, M.G., Erzberger, J.P., Grob, P., Leschziner, A.E., Berger, J.M., Nogales, E., and Botchan, M. 2006. Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. Nat Struct Mol Biol 13:684-690.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 684-690
-
-
Clarey, M.G.1
Erzberger, J.P.2
Grob, P.3
Leschziner, A.E.4
Berger, J.M.5
Nogales, E.6
Botchan, M.7
-
36
-
-
33845648483
-
Structural basis of the Methanothermobacter thermautotrophicus MCM helicase activity
-
Costa, A., Pape, T., van Heel, M., Brick, P., Patwardhan, A., and Onesti, S. 2006a. Structural basis of the Methanothermobacter thermautotrophicus MCM helicase activity. Nucleic Acids Res 34:5829-5838.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 5829-5838
-
-
Costa, A.1
Pape, T.2
van Heel, M.3
Brick, P.4
Patwardhan, A.5
Onesti, S.6
-
37
-
-
33749266161
-
Structural studies of the archaeal MCM complex in different functional states
-
Costa, A., Pape, T., van Heel, M., Brick, P., Patwardhan, A., and Onesti, S. 2006b. Structural studies of the archaeal MCM complex in different functional states. J Struct Biol 156:210-219.
-
(2006)
J Struct Biol
, vol.156
, pp. 210-219
-
-
Costa, A.1
Pape, T.2
van Heel, M.3
Brick, P.4
Patwardhan, A.5
Onesti, S.6
-
38
-
-
0021710080
-
-
Craig, N. 1984. E. coli integration host factor binds to specific sites in DNA. Cell 39:707-716.
-
Craig, N. 1984. E. coli integration host factor binds to specific sites in DNA. Cell 39:707-716.
-
-
-
-
39
-
-
13844254122
-
Unraveling the early steps of prokaryotic replication
-
Cunningham, E.L., and Berger, J.M. 2005. Unraveling the early steps of prokaryotic replication. Curr Opin Struct Biol 15:68-76.
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 68-76
-
-
Cunningham, E.L.1
Berger, J.M.2
-
40
-
-
17044410835
-
Eukaryotic origins of DNA replication: Could you please be more specific?
-
Cvetic, C., and Walter, J.C. 2005. Eukaryotic origins of DNA replication: could you please be more specific? Semin Cell Dev Biol 16:343-353.
-
(2005)
Semin Cell Dev Biol
, vol.16
, pp. 343-353
-
-
Cvetic, C.1
Walter, J.C.2
-
41
-
-
0037124375
-
The DnaC helicase loader is a dual ATP/ADP switch protein
-
Davey, M.J., Fang, L., McInerney, P., Georgescu, R.E., and O'Donnell, M. 2002a. The DnaC helicase loader is a dual ATP/ADP switch protein. EMBO J 21:3148-3159.
-
(2002)
EMBO J
, vol.21
, pp. 3148-3159
-
-
Davey, M.J.1
Fang, L.2
McInerney, P.3
Georgescu, R.E.4
O'Donnell, M.5
-
42
-
-
0036844556
-
Motors and switches: AAA+ machines within the replisome
-
Davey, M.J., Jeruzalmi, D., Kuriyan, J., and O'Donnell, M. 2002b. Motors and switches: AAA+ machines within the replisome. Nat Rev Mol Cell Biol 3:826-835.
-
(2002)
Nat Rev Mol Cell Biol
, vol.3
, pp. 826-835
-
-
Davey, M.J.1
Jeruzalmi, D.2
Kuriyan, J.3
O'Donnell, M.4
-
43
-
-
0042200759
-
Replicative helicase loaders: Ring breakers and ring makers
-
Davey, M.J., and O'Donnell, M. 2003. Replicative helicase loaders: ring breakers and ring makers. Curr Biol 13:R594-R596.
-
(2003)
Curr Biol
, vol.13
-
-
Davey, M.J.1
O'Donnell, M.2
-
44
-
-
5644225579
-
A CDC6-like factor from the archaea Sulfolobus solfataricus promotes binding of the mini-chromosome maintenance complex to DNA
-
De Felice, M., Esposito, L., Pucci, B., De Falco, M., Rossi, M., and Pisani, F.M. 2004. A CDC6-like factor from the archaea Sulfolobus solfataricus promotes binding of the mini-chromosome maintenance complex to DNA. J Biol Chem 279:43008-43012.
-
(2004)
J Biol Chem
, vol.279
, pp. 43008-43012
-
-
De Felice, M.1
Esposito, L.2
Pucci, B.3
De Falco, M.4
Rossi, M.5
Pisani, F.M.6
-
45
-
-
0023587849
-
Simian virus 40 large tumor antigen requires three core replication origin domains for DNA unwinding and replication in vitro
-
Dean, F.B., Borowiec, J.A., Ishimi, Y., Deb, S., Tegtmeyer, P., and Hurwitz, J. 1987a. Simian virus 40 large tumor antigen requires three core replication origin domains for DNA unwinding and replication in vitro. Proc Natl Acad Sci USA 84:8267-8271.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 8267-8271
-
-
Dean, F.B.1
Borowiec, J.A.2
Ishimi, Y.3
Deb, S.4
Tegtmeyer, P.5
Hurwitz, J.6
-
46
-
-
0009607249
-
Simian virus 40 (SV40) DNA replication: SV40 large T antigen unwinds DNA containing the SV40 origin of replication
-
Dean, F.B., Bullock, P., Murakami, Y., Wobbe, C.R., Weissbach, L., and Hurwitz, J. 1987b. Simian virus 40 (SV40) DNA replication: SV40 large T antigen unwinds DNA containing the SV40 origin of replication. Proc Natl Acad Sci USA 84:16-20.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 16-20
-
-
Dean, F.B.1
Bullock, P.2
Murakami, Y.3
Wobbe, C.R.4
Weissbach, L.5
Hurwitz, J.6
-
47
-
-
5644225579
-
A CDC6-like factor from the archaea Sulfolobus solfataricus promotes binding of the mini-chromosome maintenance complex to DNA
-
DeFelice, M. 2004. A CDC6-like factor from the archaea Sulfolobus solfataricus promotes binding of the mini-chromosome maintenance complex to DNA. J Biol Chem 279:43008-43012.
-
(2004)
J Biol Chem
, vol.279
, pp. 43008-43012
-
-
DeFelice, M.1
-
48
-
-
0029445205
-
Stepwise assembly of initiation complexes at budding yeast replication origins during the cell cycle
-
Diffley, J.F., Cocker, J.H., Dowell, S.J., Harwood, J., and Rowley, A. 1995. Stepwise assembly of initiation complexes at budding yeast replication origins during the cell cycle. J Cell Sci Suppl 19:67-72.
-
(1995)
J Cell Sci Suppl
, vol.19
, pp. 67-72
-
-
Diffley, J.F.1
Cocker, J.H.2
Dowell, S.J.3
Harwood, J.4
Rowley, A.5
-
49
-
-
0024121526
-
Purification of a yeast protein that binds to origins of DNA replication and a transcriptional silencer
-
Diffley, J.F., and Stillman, B. 1988. Purification of a yeast protein that binds to origins of DNA replication and a transcriptional silencer. Proc Natl Acad Sci USA 85:2120-2124.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 2120-2124
-
-
Diffley, J.F.1
Stillman, B.2
-
50
-
-
34548530410
-
Replication origin recognition and deformation by a heterodimeric archaeal Orc1 complex
-
Dueber, E.L., Corn, J.E., Bell, S.D., and Berger, J.M. 2007. Replication origin recognition and deformation by a heterodimeric archaeal Orc1 complex. Science 317:1210-1213.
-
(2007)
Science
, vol.317
, pp. 1210-1213
-
-
Dueber, E.L.1
Corn, J.E.2
Bell, S.D.3
Berger, J.M.4
-
51
-
-
0031587829
-
Archaea and the origin(s) of DNA replication proteins
-
Edgell, D.R., and Doolittle, W.F. 1997. Archaea and the origin(s) of DNA replication proteins. Cell 89:995-998.
-
(1997)
Cell
, vol.89
, pp. 995-998
-
-
Edgell, D.R.1
Doolittle, W.F.2
-
52
-
-
0042329503
-
Distinct replication requirements for the two Vibrio cholerae chromosomes
-
Egan, E.S., and Waldor, M.K. 2003. Distinct replication requirements for the two Vibrio cholerae chromosomes. Cell 114:521-530.
-
(2003)
Cell
, vol.114
, pp. 521-530
-
-
Egan, E.S.1
Waldor, M.K.2
-
53
-
-
0033634815
-
Crystal structure of the DNA binding domain of the replication initiation protein E1 from papillomavirus
-
Enemark, E.J., Chen, G., Vaughn, D.E., Stenlund, A., and Joshua-Tor, L. 2000. Crystal structure of the DNA binding domain of the replication initiation protein E1 from papillomavirus. Mol Cell 6:149-158.
-
(2000)
Mol Cell
, vol.6
, pp. 149-158
-
-
Enemark, E.J.1
Chen, G.2
Vaughn, D.E.3
Stenlund, A.4
Joshua-Tor, L.5
-
54
-
-
33746375404
-
Mechanism of DNA translocation in a replicative hexameric helicase
-
Enemark, E.J., and Joshua-Tor, L. 2006. Mechanism of DNA translocation in a replicative hexameric helicase. Nature 442:270-275.
-
(2006)
Nature
, vol.442
, pp. 270-275
-
-
Enemark, E.J.1
Joshua-Tor, L.2
-
55
-
-
0037086545
-
Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex
-
Enemark, E.J., Stenlund, A., and Joshua-Tor, L. 2002. Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex. EMBO J 21:1487-1496.
-
(2002)
EMBO J
, vol.21
, pp. 1487-1496
-
-
Enemark, E.J.1
Stenlund, A.2
Joshua-Tor, L.3
-
56
-
-
33745041480
-
Evolutionary relationships and structural mechanisms of AAA+ proteins
-
Erzberger, J.P., and Berger, J.M. 2006. Evolutionary relationships and structural mechanisms of AAA+ proteins. Annu Rev Biophys Biomol Struct 35:93-114.
-
(2006)
Annu Rev Biophys Biomol Struct
, vol.35
, pp. 93-114
-
-
Erzberger, J.P.1
Berger, J.M.2
-
57
-
-
33746860263
-
Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling
-
Erzberger, J.P., Mott, M.L., and Berger, J.M. 2006. Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling. Nat Struct Mol Biol 13:676-683.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 676-683
-
-
Erzberger, J.P.1
Mott, M.L.2
Berger, J.M.3
-
58
-
-
0037119995
-
The structure of bacterial DnaA: Implications for general mechanisms underlying DNA replication initiation
-
Erzberger, J.P., Pirruccello, M.M., and Berger, J.M. 2002. The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation. EMBO J 21:4763-4773.
-
(2002)
EMBO J
, vol.21
, pp. 4763-4773
-
-
Erzberger, J.P.1
Pirruccello, M.M.2
Berger, J.M.3
-
59
-
-
0033213720
-
Replisome assembly at oriC, the replication origin of E. coli, reveals an explanation for initiation sites outside an origin
-
Fang, L., Davey, M.J., and O'Donnell, M. 1999. Replisome assembly at oriC, the replication origin of E. coli, reveals an explanation for initiation sites outside an origin. Mol Cell 4:541-553.
-
(1999)
Mol Cell
, vol.4
, pp. 541-553
-
-
Fang, L.1
Davey, M.J.2
O'Donnell, M.3
-
60
-
-
0031608244
-
Introduction to simian virus 40: Getting by with more than a little help from its host cell
-
Fanning, E. 1998. Introduction to simian virus 40: getting by with more than a little help from its host cell. Devel Biol Stand 94:3-8.
-
(1998)
Devel Biol Stand
, vol.94
, pp. 3-8
-
-
Fanning, E.1
-
61
-
-
0026724311
-
Structure and function of simian virus 40 large tumor antigen
-
Fanning, E., and Knippers, R. 1992. Structure and function of simian virus 40 large tumor antigen. Annu Rev Biochem 61:55-85.
-
(1992)
Annu Rev Biochem
, vol.61
, pp. 55-85
-
-
Fanning, E.1
Knippers, R.2
-
62
-
-
0031984642
-
Transient viral DNA replication and repression of viral transcription are supported by the C-terminal domain of the bovine papillomavirus type 1 E1 protein
-
Ferran, M.C., and McBride, A.A. 1998. Transient viral DNA replication and repression of viral transcription are supported by the C-terminal domain of the bovine papillomavirus type 1 E1 protein. J Virol 72:796-801.
-
(1998)
J Virol
, vol.72
, pp. 796-801
-
-
Ferran, M.C.1
McBride, A.A.2
-
63
-
-
0026527078
-
Involvement of Fis protein in replication of the Escherichia coli chromosome
-
Filutowicz, M. 1992. Involvement of Fis protein in replication of the Escherichia coli chromosome. J Bacteriol 174:398-407.
-
(1992)
J Bacteriol
, vol.174
, pp. 398-407
-
-
Filutowicz, M.1
-
64
-
-
0025094001
-
The requirement of IHF protein for extrachromosomal replication of the Escherichia coli oriC in a mutant deficient in DNA polymerase I activity
-
Filutowicz, M. 1990. The requirement of IHF protein for extrachromosomal replication of the Escherichia coli oriC in a mutant deficient in DNA polymerase I activity. New Biologist 2:818-827.
-
(1990)
New Biologist
, vol.2
, pp. 818-827
-
-
Filutowicz, M.1
-
65
-
-
0037336323
-
The structure and function of MCM from archaeal M. Thermoautotrophicum
-
Fletcher, R.J., Bishop, B.E., Leon, R.P., Sclafani, R.A., Ogata, C.M., and Chen, X.S. 2003. The structure and function of MCM from archaeal M. Thermoautotrophicum. Nat Struct Biol 10:160-167.
-
(2003)
Nat Struct Biol
, vol.10
, pp. 160-167
-
-
Fletcher, R.J.1
Bishop, B.E.2
Leon, R.P.3
Sclafani, R.A.4
Ogata, C.M.5
Chen, X.S.6
-
66
-
-
0035800571
-
Interplay between an AAA module and an integrin I domain may regulate the function of magnesium chelatase
-
Fodje, M.N., Hansson, A., Hansson, M., Olsen, J.G., Gough, S., Willows, R.D., and Al-Karadaghi, S. 2001. Interplay between an AAA module and an integrin I domain may regulate the function of magnesium chelatase. J Mol Biol 311:111-122.
-
(2001)
J Mol Biol
, vol.311
, pp. 111-122
-
-
Fodje, M.N.1
Hansson, A.2
Hansson, M.3
Olsen, J.G.4
Gough, S.5
Willows, R.D.6
Al-Karadaghi, S.7
-
67
-
-
0036596334
-
Evolution of the Archaea
-
Forterre, P., Brochier, C., and Philippe, H. 2002. Evolution of the Archaea. Theor Popul Biol 61:409-422.
-
(2002)
Theor Popul Biol
, vol.61
, pp. 409-422
-
-
Forterre, P.1
Brochier, C.2
Philippe, H.3
-
68
-
-
0033548196
-
Biochemical and electron microscopic image analysis of the hexameric E1 helicase
-
Fouts, E.T., Yu, X., Egelman, E.H., and Botchan, M.R. 1999. Biochemical and electron microscopic image analysis of the hexameric E1 helicase. J Biol Chem 274:4447-4458.
-
(1999)
J Biol Chem
, vol.274
, pp. 4447-4458
-
-
Fouts, E.T.1
Yu, X.2
Egelman, E.H.3
Botchan, M.R.4
-
69
-
-
0038476181
-
Structural basis of replication origin recognition by the DnaA protein
-
Fujikawa, N., Kurumizaka, H., Nureki, O., Terada, T., Shirouzu, M., Katayama, T., and Yokoyama, S. 2003. Structural basis of replication origin recognition by the DnaA protein. Nucleic Acids Res 31:2077-2086.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2077-2086
-
-
Fujikawa, N.1
Kurumizaka, H.2
Nureki, O.3
Terada, T.4
Shirouzu, M.5
Katayama, T.6
Yokoyama, S.7
-
70
-
-
0021720088
-
The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites
-
Fuller, R.S., Funnell, B.E., and Kornberg, A. 1984. The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites. Cell 38:889-900.
-
(1984)
Cell
, vol.38
, pp. 889-900
-
-
Fuller, R.S.1
Funnell, B.E.2
Kornberg, A.3
-
71
-
-
0023664708
-
In vitro assembly of a prepriming complex at the origin of the Escherichia coli chromosome
-
Funnell, B.E., Baker, T.A., and Kornberg, A. 1987. In vitro assembly of a prepriming complex at the origin of the Escherichia coli chromosome. J Biol Chem 262:10327-10334.
-
(1987)
J Biol Chem
, vol.262
, pp. 10327-10334
-
-
Funnell, B.E.1
Baker, T.A.2
Kornberg, A.3
-
72
-
-
4444274603
-
Insights into the oligomeric states, conformational changes, and helicase activities of SV40 large tumor antigen
-
Gai, D., Li, D., Finkielstein, C.V., Ott, R.D., Taneja, P., Fanning, E., and Chen, X.S. 2004a. Insights into the oligomeric states, conformational changes, and helicase activities of SV40 large tumor antigen. J Biol Chem 279:38952-38959.
-
(2004)
J Biol Chem
, vol.279
, pp. 38952-38959
-
-
Gai, D.1
Li, D.2
Finkielstein, C.V.3
Ott, R.D.4
Taneja, P.5
Fanning, E.6
Chen, X.S.7
-
73
-
-
4444226952
-
Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen
-
Gai, D., Zhao, R., Li, D., Finkielstein, C.V., and Chen, X.S. 2004b. Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen. Cell 119:47-60.
-
(2004)
Cell
, vol.119
, pp. 47-60
-
-
Gai, D.1
Zhao, R.2
Li, D.3
Finkielstein, C.V.4
Chen, X.S.5
-
74
-
-
33645717628
-
GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forks
-
Gambus, A. 2006. GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forks. Nature Cell Biol 8:358-366.
-
(2006)
Nature Cell Biol
, vol.8
, pp. 358-366
-
-
Gambus, A.1
-
75
-
-
34548529079
-
Structural basis of DNA replication origin recognition by an ORC protein
-
Gaudier, M., Schuwirth, B.S., Westcott, S.L., and Wigley, D.B. 2007. Structural basis of DNA replication origin recognition by an ORC protein. Science 317:1213-1216.
-
(2007)
Science
, vol.317
, pp. 1213-1216
-
-
Gaudier, M.1
Schuwirth, B.S.2
Westcott, S.L.3
Wigley, D.B.4
-
76
-
-
0025895162
-
The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coli
-
Gille, H. 1991. The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coli. Nucleic Acids Res 19:4167-4172.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 4167-4172
-
-
Gille, H.1
-
77
-
-
0025905171
-
Localized DNA melting and structural pertubations in the origin of replication, oriC, of Escherichia coli in vitro and in vivo
-
Gille, H., and Messer, W. 1991. Localized DNA melting and structural pertubations in the origin of replication, oriC, of Escherichia coli in vitro and in vivo. EMBO J 10:1579-1584.
-
(1991)
EMBO J
, vol.10
, pp. 1579-1584
-
-
Gille, H.1
Messer, W.2
-
78
-
-
3042852862
-
Reconstitution of licensed replication origins on Xenopus sperm nuclei using purified proteins
-
Gillespie, P.J., Li, A., and Blow, J.J. 2001. Reconstitution of licensed replication origins on Xenopus sperm nuclei using purified proteins. BMC Biochem 2:15.
-
(2001)
BMC Biochem
, vol.2
, pp. 15
-
-
Gillespie, P.J.1
Li, A.2
Blow, J.J.3
-
79
-
-
0037271207
-
Common domains in the initiators of DNA replication in Bacteria, Archaea and Eukarya: Combined structural, functional and phylogenetic perspectives
-
Giraldo, R. 2003. Common domains in the initiators of DNA replication in Bacteria, Archaea and Eukarya: combined structural, functional and phylogenetic perspectives. FEMS Microbiol Rev 26:533-554.
-
(2003)
FEMS Microbiol Rev
, vol.26
, pp. 533-554
-
-
Giraldo, R.1
-
80
-
-
1542682737
-
Archeal DNA replication: Eukaryal proteins in a bacterial context
-
Grabowski, B., and Kelman, Z. 2003. Archeal DNA replication: eukaryal proteins in a bacterial context. Annu Rev Microbiol 57:487-516.
-
(2003)
Annu Rev Microbiol
, vol.57
, pp. 487-516
-
-
Grabowski, B.1
Kelman, Z.2
-
81
-
-
33749188757
-
Biochemical analysis of a DNA replication origin in the archaeon Aeropyrum pernix
-
Grainge, I., Gaudier, M., Schuwirth, B.S., Westcott, S.L., Sandall, J., Atanassova, N., and Wigley, D.B. 2006. Biochemical analysis of a DNA replication origin in the archaeon Aeropyrum pernix. J Mol Biol 363:355-369.
-
(2006)
J Mol Biol
, vol.363
, pp. 355-369
-
-
Grainge, I.1
Gaudier, M.2
Schuwirth, B.S.3
Westcott, S.L.4
Sandall, J.5
Atanassova, N.6
Wigley, D.B.7
-
82
-
-
0344012482
-
Biochemical analysis of components of the pre-replication complex of Archaeoglobus fulgidus
-
Grainge, I. 2003. Biochemical analysis of components of the pre-replication complex of Archaeoglobus fulgidus. Nucleic Acids Res 31:4888-4898.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4888-4898
-
-
Grainge, I.1
-
83
-
-
0033975575
-
IHF redistributes bound initiator protein, DnaA, on supercoiled oriC of Escherichia coli
-
Grimwade, J.E., Ryan, V.T., and Leonard, A.C. 2000. IHF redistributes bound initiator protein, DnaA, on supercoiled oriC of Escherichia coli. Mol Microbiol 35:835-844.
-
(2000)
Mol Microbiol
, vol.35
, pp. 835-844
-
-
Grimwade, J.E.1
Ryan, V.T.2
Leonard, A.C.3
-
84
-
-
34748828078
-
Mutational analysis reveals Escherichia coli oriC interacts with both DnaA-ATP and DnaA-ADP during pre-RC assembly
-
Grimwade, J.E., Torgue, J.J., McGarry, K.C., Rozgaja, T., Enloe, S.T., and Leonard, A.C. 2007. Mutational analysis reveals Escherichia coli oriC interacts with both DnaA-ATP and DnaA-ADP during pre-RC assembly. Mol Microbio 66:428-439.
-
(2007)
Mol Microbio
, vol.66
, pp. 428-439
-
-
Grimwade, J.E.1
Torgue, J.J.2
McGarry, K.C.3
Rozgaja, T.4
Enloe, S.T.5
Leonard, A.C.6
-
85
-
-
0030666224
-
Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III
-
Guenther, B., Onrust, R., Sali, A., O'Donnell, M., and Kuriyan, J. 1997. Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III. Cell 91:335-345.
-
(1997)
Cell
, vol.91
, pp. 335-345
-
-
Guenther, B.1
Onrust, R.2
Sali, A.3
O'Donnell, M.4
Kuriyan, J.5
-
86
-
-
1642521025
-
Crystal structure of the chi:psi subassembly of the Escherichia coli DNA polymerase clamp-loader complex
-
Gulbis, J.M., Kazmirski, S.L., Finkelstein, J., Kelman, Z., O'Donnell, M., and Kuriyan, J. 2004. Crystal structure of the chi:psi subassembly of the Escherichia coli DNA polymerase clamp-loader complex. Eur J Biochem 271:439-449.
-
(2004)
Eur J Biochem
, vol.271
, pp. 439-449
-
-
Gulbis, J.M.1
Kazmirski, S.L.2
Finkelstein, J.3
Kelman, Z.4
O'Donnell, M.5
Kuriyan, J.6
-
87
-
-
0018952783
-
Regulated replication of DNA microinjected into eggs of Xenopus laevis
-
Harland, R.M., and Laskey, R.A. 1980. Regulated replication of DNA microinjected into eggs of Xenopus laevis. Cell 21:761-771.
-
(1980)
Cell
, vol.21
, pp. 761-771
-
-
Harland, R.M.1
Laskey, R.A.2
-
88
-
-
0033595814
-
Microtubule disassembly by ATP-dependent oligomerization of the AAA enzyme katanin
-
Hartman, J.J., and Vale, R.D. 1999. Microtubule disassembly by ATP-dependent oligomerization of the AAA enzyme katanin. Science 286:782-785.
-
(1999)
Science
, vol.286
, pp. 782-785
-
-
Hartman, J.J.1
Vale, R.D.2
-
89
-
-
0015796354
-
Three additional genes required for deoxyribonucleic acid synthesis in Saccharomyces cerevisiae
-
Hartwell, L.H. 1973. Three additional genes required for deoxyribonucleic acid synthesis in Saccharomyces cerevisiae. J Bacteriol 115:966-974.
-
(1973)
J Bacteriol
, vol.115
, pp. 966-974
-
-
Hartwell, L.H.1
-
90
-
-
1542467403
-
Metazoan origin selection: Origin recognition complex chromatin binding is regulated by CDC6 recruitment and ATP hydrolysis
-
Harvey, K.J., and Newport, J. 2003. Metazoan origin selection: origin recognition complex chromatin binding is regulated by CDC6 recruitment and ATP hydrolysis. J Biol Chem 278:48524-48528.
-
(2003)
J Biol Chem
, vol.278
, pp. 48524-48528
-
-
Harvey, K.J.1
Newport, J.2
-
91
-
-
0030892106
-
Suppression of initiation defects of chromosome replication in Bacillus subtilis dnaA and oriC-deleted mutants by integration of a plasmid replicon into the chromosomes
-
Hassan, A.K., Moriya, S., Ogura, M., Tanaka, T., Kawamura, F., and Ogasawara, N. 1997. Suppression of initiation defects of chromosome replication in Bacillus subtilis dnaA and oriC-deleted mutants by integration of a plasmid replicon into the chromosomes. J Bacteriol 179:2494-2502.
-
(1997)
J Bacteriol
, vol.179
, pp. 2494-2502
-
-
Hassan, A.K.1
Moriya, S.2
Ogura, M.3
Tanaka, T.4
Kawamura, F.5
Ogasawara, N.6
-
92
-
-
0026016255
-
Autonomous DNA replication in human cells is affected by the size and the source of the DNA
-
Heinzel, S.S., Krysan, P.J., Tran, C.T., and Calos, M.P. 1991. Autonomous DNA replication in human cells is affected by the size and the source of the DNA. Mol Cell Biol 11:2263-2272.
-
(1991)
Mol Cell Biol
, vol.11
, pp. 2263-2272
-
-
Heinzel, S.S.1
Krysan, P.J.2
Tran, C.T.3
Calos, M.P.4
-
93
-
-
33845330910
-
-
Heller, Ryan C Marians, Kenneth J. 2006. Replisome assembly and the direct restart of stalled replication forks. Nat Rev Mol Cell Biol 7:932.
-
Heller, Ryan C Marians, Kenneth J. 2006. Replisome assembly and the direct restart of stalled replication forks. Nat Rev Mol Cell Biol 7:932.
-
-
-
-
94
-
-
0027967499
-
Fis cannot support oriC DNA replication in vitro
-
Hiasa, H., and Marians, K.J. 1994. Fis cannot support oriC DNA replication in vitro. J Biol Chem 269:24999-25003.
-
(1994)
J Biol Chem
, vol.269
, pp. 24999-25003
-
-
Hiasa, H.1
Marians, K.J.2
-
95
-
-
13844254123
-
Binding and unwinding: SF3 viral helicases
-
Hickman, A.B., and Dyda, F. 2005. Binding and unwinding: SF3 viral helicases. Curr Opin Struct Biol 15:77-85.
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 77-85
-
-
Hickman, A.B.1
Dyda, F.2
-
96
-
-
0028179973
-
cdt1 is an essential target of the Cdc10/Sct1 transcription factor: Requirement for DNA replication and inhibition of mitosis
-
Hofmann, J.F., and Beach, D. 1994. cdt1 is an essential target of the Cdc10/Sct1 transcription factor: requirement for DNA replication and inhibition of mitosis. EMBO J 13:425-434.
-
(1994)
EMBO J
, vol.13
, pp. 425-434
-
-
Hofmann, J.F.1
Beach, D.2
-
97
-
-
0026661352
-
Mutations in the DnaA binding sites of the replication origin of Escherichia coli
-
Holz, A., Schaefer, C., Gille, H., Jueterbock, W.R., and Messer, W. 1992. Mutations in the DnaA binding sites of the replication origin of Escherichia coli. Mol. Gen. Genet. 233:81-88.
-
(1992)
Mol. Gen. Genet
, vol.233
, pp. 81-88
-
-
Holz, A.1
Schaefer, C.2
Gille, H.3
Jueterbock, W.R.4
Messer, W.5
-
98
-
-
0006896794
-
High-frequency transformation of yeast by plasmids containing the cloned yeast ARG4 gene
-
Hsiao, C.L., and Carbon, J. 1979. High-frequency transformation of yeast by plasmids containing the cloned yeast ARG4 gene. Proc Natl Acad Sci USA 76:3829-3833.
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 3829-3833
-
-
Hsiao, C.L.1
Carbon, J.2
-
99
-
-
0027763449
-
E1 protein of human papillomavirus is a DNA helicase/ATPase
-
Hughes, F.J., and Romanos, M.A. 1993. E1 protein of human papillomavirus is a DNA helicase/ATPase. Nucleic Acids Res 21:5817-5823.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 5817-5823
-
-
Hughes, F.J.1
Romanos, M.A.2
-
100
-
-
0026463867
-
Opening of the replication origin of Escherichia coli by DnaA protein with protein HU or IHF
-
Hwang, D.S., and Kornberg, A. 1992. Opening of the replication origin of Escherichia coli by DnaA protein with protein HU or IHF. J Biol Chem 267:23083-23086.
-
(1992)
J Biol Chem
, vol.267
, pp. 23083-23086
-
-
Hwang, D.S.1
Kornberg, A.2
-
101
-
-
33749033347
-
The replication clamp-loading machine at work in the three domains of life
-
Indiani, C., and O'Donnell, M. 2006. The replication clamp-loading machine at work in the three domains of life. Nat Rev Mol Cell Biol 7:751-761.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 751-761
-
-
Indiani, C.1
O'Donnell, M.2
-
102
-
-
8544240894
-
DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication
-
Ishida, T., Akimitsu, N., Kashioka, T., Hatano, M., Kubota, T., Ogata, Y., Sekimizu, K., and Katayama, T. 2004. DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication. J Biol Chem 279:45546-45555.
-
(2004)
J Biol Chem
, vol.279
, pp. 45546-45555
-
-
Ishida, T.1
Akimitsu, N.2
Kashioka, T.3
Hatano, M.4
Kubota, T.5
Ogata, Y.6
Sekimizu, K.7
Katayama, T.8
-
103
-
-
0030859463
-
A DNA helicase activity is associated with an MCM4, -6, and -7 protein complex
-
Ishimi, Y. 1997. A DNA helicase activity is associated with an MCM4, -6, and -7 protein complex. J Biol Chem 272:24508-24513.
-
(1997)
J Biol Chem
, vol.272
, pp. 24508-24513
-
-
Ishimi, Y.1
-
104
-
-
1642325936
-
Evolutionary history and higher order classification of AAA+ ATPases
-
Iyer, L.M., Leipe, D.D., Koonin, E.V., and Aravind, L. 2004a. Evolutionary history and higher order classification of AAA+ ATPases. J Struct Biol 146:11-31.
-
(2004)
J Struct Biol
, vol.146
, pp. 11-31
-
-
Iyer, L.M.1
Leipe, D.D.2
Koonin, E.V.3
Aravind, L.4
-
105
-
-
5144223072
-
Comparative genomics of the FtsK-HerA superfamily of pumping AT-Pases: Implications for the origins of chromosome segregation, cell division and viral capsid packaging
-
Iyer, L.M., Makarova, K.S., Koonin, E.V., and Aravind, L. 2004b. Comparative genomics of the FtsK-HerA superfamily of pumping AT-Pases: implications for the origins of chromosome segregation, cell division and viral capsid packaging. Nucleic Acids Res 32:5260-5279.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5260-5279
-
-
Iyer, L.M.1
Makarova, K.S.2
Koonin, E.V.3
Aravind, L.4
-
106
-
-
0000606955
-
On the regulation of DNA replication in bacteria
-
Jacob, F., Brenner, S., and Cuzin, F. 1963. On the regulation of DNA replication in bacteria. Cold Spring Harbor Symp Quant Biol 28:329-348.
-
(1963)
Cold Spring Harbor Symp Quant Biol
, vol.28
, pp. 329-348
-
-
Jacob, F.1
Brenner, S.2
Cuzin, F.3
-
107
-
-
0035943342
-
Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III
-
Jeruzalmi, D., O'Donnell, M., and Kuriyan, J. 2001a. Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III. Cell 106:429-441.
-
(2001)
Cell
, vol.106
, pp. 429-441
-
-
Jeruzalmi, D.1
O'Donnell, M.2
Kuriyan, J.3
-
108
-
-
0035943399
-
Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III
-
Jeruzalmi, D., Yurieva, O., Zhao, Y., Young, M., Stewart, J., Hingorani, M., O'Donnell, M., and Kuriyan, J. 2001b. Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III. Cell 106:417-428.
-
(2001)
Cell
, vol.106
, pp. 417-428
-
-
Jeruzalmi, D.1
Yurieva, O.2
Zhao, Y.3
Young, M.4
Stewart, J.5
Hingorani, M.6
O'Donnell, M.7
Kuriyan, J.8
-
109
-
-
33845922103
-
The replication factor C clamp loader requires arginine finger sensors to drive DNA binding and proliferating cell nuclear antigen loading
-
Johnson, A., Yao, N.Y., Bowman, G.D., Kuriyan, J., and O'Donnell, M. 2006. The replication factor C clamp loader requires arginine finger sensors to drive DNA binding and proliferating cell nuclear antigen loading. J Biol Chem 281:35531-35543.
-
(2006)
J Biol Chem
, vol.281
, pp. 35531-35543
-
-
Johnson, A.1
Yao, N.Y.2
Bowman, G.D.3
Kuriyan, J.4
O'Donnell, M.5
-
110
-
-
0036042507
-
Two separate DNA sequences within oriC participate in accurate chromosome segregation in Bacillus subtilis
-
Kadoya, R., Hassan, A.K., Kasahara, Y., Ogasawara, N., and Moriya, S. 2002. Two separate DNA sequences within oriC participate in accurate chromosome segregation in Bacillus subtilis. Mol Microbiol 45:73-87.
-
(2002)
Mol Microbiol
, vol.45
, pp. 73-87
-
-
Kadoya, R.1
Hassan, A.K.2
Kasahara, Y.3
Ogasawara, N.4
Moriya, S.5
-
111
-
-
33750312968
-
DnaA: Controlling the initiation of bacterial DNA replication and more
-
Kaguni, J.M. 2006. DnaA: controlling the initiation of bacterial DNA replication and more. Annu Rev Microbiol 60:351-375.
-
(2006)
Annu Rev Microbiol
, vol.60
, pp. 351-375
-
-
Kaguni, J.M.1
-
112
-
-
0031591026
-
Escherichia coli DnaA protein: The replication initiator
-
Kaguni, J.M. 1997. Escherichia coli DnaA protein: the replication initiator. Mol Cells 7:145-157.
-
(1997)
Mol Cells
, vol.7
, pp. 145-157
-
-
Kaguni, J.M.1
-
113
-
-
0038680253
-
Functional proteomic identification of DNA replication proteins by induced proteolysis in vivo
-
Kanemaki, M., Sanchez-Diaz, A., Gambus, A., and Labib, K. 2003. Functional proteomic identification of DNA replication proteins by induced proteolysis in vivo. Nature 423:720-724.
-
(2003)
Nature
, vol.423
, pp. 720-724
-
-
Kanemaki, M.1
Sanchez-Diaz, A.2
Gambus, A.3
Labib, K.4
-
114
-
-
0347157844
-
Mcm4,6,7 uses a "pump in ring" mechanism to unwind DNA by steric exclusion and actively translocate along a duplex
-
Kaplan, D.L., Davey, M.J., and O'Donnell, M. 2003. Mcm4,6,7 uses a "pump in ring" mechanism to unwind DNA by steric exclusion and actively translocate along a duplex. J Biol Chem 278:49171-49182.
-
(2003)
J Biol Chem
, vol.278
, pp. 49171-49182
-
-
Kaplan, D.L.1
Davey, M.J.2
O'Donnell, M.3
-
115
-
-
33744982092
-
DNA binding by the Methanothermobacter thermautotrophicus Cdc6 protein is inhibited by the minichromosome maintenance helicase
-
Kasiviswanathan, R., Shin, J.H., and Kelman, Z. 2006. DNA binding by the Methanothermobacter thermautotrophicus Cdc6 protein is inhibited by the minichromosome maintenance helicase. J. Bacteriol 188:4577-4580.
-
(2006)
J. Bacteriol
, vol.188
, pp. 4577-4580
-
-
Kasiviswanathan, R.1
Shin, J.H.2
Kelman, Z.3
-
116
-
-
0032504050
-
The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase
-
Katayama, T., Kubota, T., Kurokawa, K., Crooke, E., and Sekimizu, K. 1998. The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase. Cell 94:61-71.
-
(1998)
Cell
, vol.94
, pp. 61-71
-
-
Katayama, T.1
Kubota, T.2
Kurokawa, K.3
Crooke, E.4
Sekimizu, K.5
-
117
-
-
0035422651
-
Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli
-
Kato, J., and Katayama, T. 2001. Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli. EMBO J 20:4253-4262.
-
(2001)
EMBO J
, vol.20
, pp. 4253-4262
-
-
Kato, J.1
Katayama, T.2
-
118
-
-
33750742434
-
The exceptionally tight affinity of DnaA for ATP/ADP requires a unique aspartic acid residue in the AAA+ sensor 1 motif
-
Kawakami, H., Ozaki, S., Suzuki, S., Nakamura, K., Senriuchi, T., Su'etsugu, M., Fujimitsu, K., and Katayama, T. 2006a. The exceptionally tight affinity of DnaA for ATP/ADP requires a unique aspartic acid residue in the AAA+ sensor 1 motif. Mol Microbiol 62:1310-1324.
-
(2006)
Mol Microbiol
, vol.62
, pp. 1310-1324
-
-
Kawakami, H.1
Ozaki, S.2
Suzuki, S.3
Nakamura, K.4
Senriuchi, T.5
Su'etsugu, M.6
Fujimitsu, K.7
Katayama, T.8
-
119
-
-
33749239205
-
An isolated Hda-clamp complex is functional in the regulatory inactivation of DnaA and DNA replication
-
Kawakami, H., Su'etsugu, M., and Katayama, T. 2006b. An isolated Hda-clamp complex is functional in the regulatory inactivation of DnaA and DNA replication. J Struct Biol 156:220-229.
-
(2006)
J Struct Biol
, vol.156
, pp. 220-229
-
-
Kawakami, H.1
Su'etsugu, M.2
Katayama, T.3
-
120
-
-
4444364227
-
Multiple origins of replication in archaea
-
Kelman, L.M., and Kelman, Z. 2004. Multiple origins of replication in archaea. Trends Microbiol 12:399-401.
-
(2004)
Trends Microbiol
, vol.12
, pp. 399-401
-
-
Kelman, L.M.1
Kelman, Z.2
-
121
-
-
0038687925
-
Archaea: An archetype for replication initiation studies?
-
Kelman, L.M., and Kelman, Z. 2003. Archaea: an archetype for replication initiation studies? Mol. Microbiol. 48:605-615.
-
(2003)
Mol. Microbiol
, vol.48
, pp. 605-615
-
-
Kelman, L.M.1
Kelman, Z.2
-
122
-
-
0033593053
-
The single minichromosome maintenance protein of Methanobacterium thermoautotrophicum DeltaH contains DNA helicase activity
-
Kelman, Z., Lee, J.K., and Hurwitz, J. 1999. The single minichromosome maintenance protein of Methanobacterium thermoautotrophicum DeltaH contains DNA helicase activity. Proc Natl Acad Sci USA 96:14783-14788.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 14783-14788
-
-
Kelman, Z.1
Lee, J.K.2
Hurwitz, J.3
-
123
-
-
0030003443
-
A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome
-
Kitagawa, R., Mitsuki, H., Okazaki, T., and Ogawa, T. 1996. A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome. Mol Microbiol 19:1137-1147.
-
(1996)
Mol Microbiol
, vol.19
, pp. 1137-1147
-
-
Kitagawa, R.1
Mitsuki, H.2
Okazaki, T.3
Ogawa, T.4
-
124
-
-
0033545836
-
Electrostatic interactions during acidic phospholipid reactivation of DnaA protein, the Escherichia coli initiator of chromosomal replication
-
Kitchen, J.L., Li, Z., and Crooke, E. 1999. Electrostatic interactions during acidic phospholipid reactivation of DnaA protein, the Escherichia coli initiator of chromosomal replication. Biochemistry 38:6213-6221.
-
(1999)
Biochemistry
, vol.38
, pp. 6213-6221
-
-
Kitchen, J.L.1
Li, Z.2
Crooke, E.3
-
125
-
-
0031002795
-
Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex
-
Klemm, R.D., Austin, R.J., and Bell, S.P. 1997. Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex. Cell 88:493-502.
-
(1997)
Cell
, vol.88
, pp. 493-502
-
-
Klemm, R.D.1
Austin, R.J.2
Bell, S.P.3
-
127
-
-
0024786678
-
The DNA unwinding element: A novel, cis-acting component that facilitates opening of the Escherichia coli replication origin
-
Kowalski, D., and Eddy, M.J. 1989. The DNA unwinding element: a novel, cis-acting component that facilitates opening of the Escherichia coli replication origin. EMBO J 8:4335-4344.
-
(1989)
EMBO J
, vol.8
, pp. 4335-4344
-
-
Kowalski, D.1
Eddy, M.J.2
-
128
-
-
0037510025
-
A novel ring-like complex of Xenopus proteins essential for the initiation of DNA replication
-
Kubota, Y., Takase, Y., Komori, Y., Hashimoto, Y., Arata, T., Kamimura, Y., Araki, H., and Takisawa, H. 2003. A novel ring-like complex of Xenopus proteins essential for the initiation of DNA replication. Genes Dev 17:1141-1152.
-
(2003)
Genes Dev
, vol.17
, pp. 1141-1152
-
-
Kubota, Y.1
Takase, Y.2
Komori, Y.3
Hashimoto, Y.4
Arata, T.5
Kamimura, Y.6
Araki, H.7
Takisawa, H.8
-
129
-
-
34247566461
-
Model for T-antigen-dependent melting of the simian virus 40 core origin based on studies of the interaction of the beta-hairpin with DNA
-
Kumar, A., Meinke, G., Reese, D.K., Moine, S., Phelan, P.J., Fradet-Turcotte, A., Archambault, J., Bohm, A., and Bullock, P.A. 2007. Model for T-antigen-dependent melting of the simian virus 40 core origin based on studies of the interaction of the beta-hairpin with DNA. J Virol 81:4808-4818.
-
(2007)
J Virol
, vol.81
, pp. 4808-4818
-
-
Kumar, A.1
Meinke, G.2
Reese, D.K.3
Moine, S.4
Phelan, P.J.5
Fradet-Turcotte, A.6
Archambault, J.7
Bohm, A.8
Bullock, P.A.9
-
130
-
-
0033485526
-
Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli
-
Kurokawa, K., Nishida, S., Emoto, A., Sekimizu, K., and Katayama, T. 1999. Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli. EMBO J 18:6642-6652.
-
(1999)
EMBO J
, vol.18
, pp. 6642-6652
-
-
Kurokawa, K.1
Nishida, S.2
Emoto, A.3
Sekimizu, K.4
Katayama, T.5
-
131
-
-
33845504065
-
Direct observation of DNA bending/unbending kinetics in complex with DNA-bending protein IHF
-
Kuznetsov, S.V., Sugimura, S., Vivas, P., Crothers, D.M., and Ansari, A. 2006. Direct observation of DNA bending/unbending kinetics in complex with DNA-bending protein IHF. Proc Natl Acad Sci USA 103:18515-18520.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 18515-18520
-
-
Kuznetsov, S.V.1
Sugimura, S.2
Vivas, P.3
Crothers, D.M.4
Ansari, A.5
-
132
-
-
0034063607
-
ATPase switches controlling DNA replication initiation
-
Lee, D.G., and Bell, S.P. 2000. ATPase switches controlling DNA replication initiation. Curr Opin Cell Biol 12:280-285.
-
(2000)
Curr Opin Cell Biol
, vol.12
, pp. 280-285
-
-
Lee, D.G.1
Bell, S.P.2
-
133
-
-
0030712877
-
Architecture of the yeast origin recognition complex bound to origins of DNA replication
-
Lee, D.G., and Bell, S.P. 1997. Architecture of the yeast origin recognition complex bound to origins of DNA replication. Mol Cell Biol 17:7159-7168.
-
(1997)
Mol Cell Biol
, vol.17
, pp. 7159-7168
-
-
Lee, D.G.1
Bell, S.P.2
-
134
-
-
0034282727
-
Regulation of origin recognition complex conformation and ATPase activity: Differential effects of single-stranded and double-stranded DNA binding
-
Lee, D.G., Makhov, A.M., Klemm, R.D., Griffith, J.D., and Bell, S.P. 2000. Regulation of origin recognition complex conformation and ATPase activity: differential effects of single-stranded and double-stranded DNA binding. EMBO J 19:4774-4782.
-
(2000)
EMBO J
, vol.19
, pp. 4774-4782
-
-
Lee, D.G.1
Makhov, A.M.2
Klemm, R.D.3
Griffith, J.D.4
Bell, S.P.5
-
135
-
-
0035923508
-
The Schizosaccharomyces pombe origin recognition complex interacts with multiple AT-rich regions of the replication origin DNA by means of the AT-hook domains of the spOrc4 protein
-
Lee, J.K., Moon, K.Y., Jiang, Y., and Hurwitz, J. 2001. The Schizosaccharomyces pombe origin recognition complex interacts with multiple AT-rich regions of the replication origin DNA by means of the AT-hook domains of the spOrc4 protein. Proc Natl Acad Sci USA 98:13589-13594.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13589-13594
-
-
Lee, J.K.1
Moon, K.Y.2
Jiang, Y.3
Hurwitz, J.4
-
136
-
-
0029761706
-
Physical interactions among Mcm proteins and effects of Mcm dosage on DNA replication in Saccharomyces cerevisiae
-
Lei, M., Kawasaki, Y., and Tye, B.K. 1996. Physical interactions among Mcm proteins and effects of Mcm dosage on DNA replication in Saccharomyces cerevisiae. Mol Cell Biol 16:5081-5090.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 5081-5090
-
-
Lei, M.1
Kawasaki, Y.2
Tye, B.K.3
-
137
-
-
0142011067
-
Evolution and classification of P-loop kinases and related proteins
-
Leipe, D.D., Koonin, E.V., and Aravind, L. 2003. Evolution and classification of P-loop kinases and related proteins. J Mol Biol 333:781-815.
-
(2003)
J Mol Biol
, vol.333
, pp. 781-815
-
-
Leipe, D.D.1
Koonin, E.V.2
Aravind, L.3
-
138
-
-
0038700763
-
Structure of the replicative helicase of the oncoprotein SV40 large tumour antigen
-
Li, D., Zhao, R., Lilyestrom, W., Gai, D., Zhang, R., DeCaprio, J.A., Fanning, E., Jochimiak, A., Szakonyi, G., and Chen, X.S. 2003. Structure of the replicative helicase of the oncoprotein SV40 large tumour antigen. Nature 423:512-518.
-
(2003)
Nature
, vol.423
, pp. 512-518
-
-
Li, D.1
Zhao, R.2
Lilyestrom, W.3
Gai, D.4
Zhang, R.5
DeCaprio, J.A.6
Fanning, E.7
Jochimiak, A.8
Szakonyi, G.9
Chen, X.S.10
-
139
-
-
0031455421
-
Persistent initiation of DNA replication and chromatin-bound MCM proteins during the cell cycle in cdc6 mutants
-
Liang, C., and Stillman, B. 1997. Persistent initiation of DNA replication and chromatin-bound MCM proteins during the cell cycle in cdc6 mutants. Genes Dev 11:3375-3386.
-
(1997)
Genes Dev
, vol.11
, pp. 3375-3386
-
-
Liang, C.1
Stillman, B.2
-
140
-
-
0035104474
-
Nucleosomes positioned by ORC facilitate the initiation of DNA replication
-
Lipford, J.R., and Bell, S.P. 2001. Nucleosomes positioned by ORC facilitate the initiation of DNA replication. Mol Cell 7:21-30.
-
(2001)
Mol Cell
, vol.7
, pp. 21-30
-
-
Lipford, J.R.1
Bell, S.P.2
-
141
-
-
0033634866
-
Structure and function of Cdc6/Cdc18: Implications for origin recognition and checkpoint control
-
Liu, J., Smith, C.L., DeRyckere, D., DeAngelis, K., Martin, G.S., and Berger, J.M. 2000. Structure and function of Cdc6/Cdc18: implications for origin recognition and checkpoint control. Mol Cell 6:637-648.
-
(2000)
Mol Cell
, vol.6
, pp. 637-648
-
-
Liu, J.1
Smith, C.L.2
DeRyckere, D.3
DeAngelis, K.4
Martin, G.S.5
Berger, J.M.6
-
142
-
-
33947251128
-
Adjacent residues in the E1 initiator beta-hairpin define different roles of the beta-hairpin in Ori melting, helicase loading, and helicase activity
-
Liu, X., Schuck, S., and Stenlund, A. 2007. Adjacent residues in the E1 initiator beta-hairpin define different roles of the beta-hairpin in Ori melting, helicase loading, and helicase activity. Mol Cell 25:825-837.
-
(2007)
Mol Cell
, vol.25
, pp. 825-837
-
-
Liu, X.1
Schuck, S.2
Stenlund, A.3
-
143
-
-
0032972657
-
Identification of putative chromosomal origins of replication in Archaea
-
Lopez, P., Philippe, H., Myllykallio, H., and Forterre, P. 1999. Identification of putative chromosomal origins of replication in Archaea. Mol Microbiol 32:883-886.
-
(1999)
Mol Microbiol
, vol.32
, pp. 883-886
-
-
Lopez, P.1
Philippe, H.2
Myllykallio, H.3
Forterre, P.4
-
144
-
-
0030443808
-
Solution structure of the origin DNA-binding domain of SV40 T-antigen
-
Luo, X., Sanford, D.G., Bullock, P.A., and Bachovchin, W.W. 1996. Solution structure of the origin DNA-binding domain of SV40 T-antigen. Nat Struct Biol 3:1034-1039.
-
(1996)
Nat Struct Biol
, vol.3
, pp. 1034-1039
-
-
Luo, X.1
Sanford, D.G.2
Bullock, P.A.3
Bachovchin, W.W.4
-
145
-
-
3142748120
-
Where does bacterial replication start? Rules for predicting the oriC region
-
Mackiewicz, P., Zakrzewska-Czerwinska, J., Zawilak, A., Dudek, M.R., and Cebrat, S. 2004. Where does bacterial replication start? Rules for predicting the oriC region. Nucleic Acids Res 32:3781-3791.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 3781-3791
-
-
Mackiewicz, P.1
Zakrzewska-Czerwinska, J.2
Zawilak, A.3
Dudek, M.R.4
Cebrat, S.5
-
146
-
-
0023924780
-
DNA polymerase III holoenzyme of Escherichia coli. II. A novel complex including the gamma subunit essential for processive synthesis
-
Maki, S. 1988. DNA polymerase III holoenzyme of Escherichia coli. II. A novel complex including the gamma subunit essential for processive synthesis. J Biol Chem 263:6555-6560.
-
(1988)
J Biol Chem
, vol.263
, pp. 6555-6560
-
-
Maki, S.1
-
147
-
-
0026508417
-
A yeast chromosomal origin of DNA replication defined by multiple functional elements
-
Marahrens, Y., and Stillman, B. 1992. A yeast chromosomal origin of DNA replication defined by multiple functional elements. Science 255:817-823.
-
(1992)
Science
, vol.255
, pp. 817-823
-
-
Marahrens, Y.1
Stillman, B.2
-
148
-
-
0030035666
-
Ordered and sequential binding of DnaA protein to oriC, the chromosomal origin of Escherichia coli
-
Margulies, C., and Kaguni, J.M. 1996. Ordered and sequential binding of DnaA protein to oriC, the chromosomal origin of Escherichia coli. J Biol Chem 271:17035-17040.
-
(1996)
J Biol Chem
, vol.271
, pp. 17035-17040
-
-
Margulies, C.1
Kaguni, J.M.2
-
149
-
-
0024550638
-
ATP-dependent assembly of double hexamers of SV40 T antigen at the viral origin of DNA replication
-
Mastrangelo, I.A., Hough, P.V., Wall, J.S., Dodson, M., Dean, F.B., and Hurwitz, J. 1989. ATP-dependent assembly of double hexamers of SV40 T antigen at the viral origin of DNA replication. Nature 338:658-662.
-
(1989)
Nature
, vol.338
, pp. 658-662
-
-
Mastrangelo, I.A.1
Hough, P.V.2
Wall, J.S.3
Dodson, M.4
Dean, F.B.5
Hurwitz, J.6
-
150
-
-
0022419397
-
Sites of dnaA protein-binding in the replication origin of the Escherichia coli K-12 chromosome
-
Matsui, M., Oka, A., Takanami, M., Yasuda, S., and Hirota, Y. 1985. Sites of dnaA protein-binding in the replication origin of the Escherichia coli K-12 chromosome. J Mol Biol 184: 529-533.
-
(1985)
J Mol Biol
, vol.184
, pp. 529-533
-
-
Matsui, M.1
Oka, A.2
Takanami, M.3
Yasuda, S.4
Hirota, Y.5
-
151
-
-
0035949506
-
In vivo interactions of archaeal Cdc6/Orc1 and minichromosome maintenance proteins with the replication origin
-
Matsunaga, F., Forterre, P., Ishino, Y., and Myllykallio, H. 2001. In vivo interactions of archaeal Cdc6/Orc1 and minichromosome maintenance proteins with the replication origin. Proc Natl Acad Sci USA 98:11152-11157.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 11152-11157
-
-
Matsunaga, F.1
Forterre, P.2
Ishino, Y.3
Myllykallio, H.4
-
152
-
-
34250882112
-
Genomewide and biochemical analyses of DNA-binding activity of Cdc6/Orc1 and Mcm proteins in Pyrococcus sp
-
Matsunaga, F., Glatigny, A., Mucchielli-Giorgi, M.H., Agier, N., Delacroix, H., Marisa, L., Durosay, P., Ishino, Y., Aggerbeck, L., and Forterre, P. 2007. Genomewide and biochemical analyses of DNA-binding activity of Cdc6/Orc1 and Mcm proteins in Pyrococcus sp. Nucleic Acids Res 35:3214-3222.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3214-3222
-
-
Matsunaga, F.1
Glatigny, A.2
Mucchielli-Giorgi, M.H.3
Agier, N.4
Delacroix, H.5
Marisa, L.6
Durosay, P.7
Ishino, Y.8
Aggerbeck, L.9
Forterre, P.10
-
153
-
-
1542297764
-
Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP
-
McGarry, K.C., Ryan, V.T., Grimwade, J.E., and Leonard, A.C. 2004. Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP. Proc Natl Acad Sci USA 101:2811-2816.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 2811-2816
-
-
McGarry, K.C.1
Ryan, V.T.2
Grimwade, J.E.3
Leonard, A.C.4
-
154
-
-
0021714731
-
Lack of specific sequence requirement for DNA replication in Xenopus eggs compared with high sequence specificity in yeast
-
Mechali, M., and Kearsey, S. 1984. Lack of specific sequence requirement for DNA replication in Xenopus eggs compared with high sequence specificity in yeast. Cell 38:55-64.
-
(1984)
Cell
, vol.38
, pp. 55-64
-
-
Mechali, M.1
Kearsey, S.2
-
155
-
-
33646193384
-
Crystal structure of the simian virus 40 large T-antigen origin-binding domain
-
Meinke, G., Bullock, P.A., and Bohm, A. 2006. Crystal structure of the simian virus 40 large T-antigen origin-binding domain. J Virol 80:4304-4312.
-
(2006)
J Virol
, vol.80
, pp. 4304-4312
-
-
Meinke, G.1
Bullock, P.A.2
Bohm, A.3
-
156
-
-
33846975786
-
The crystal structure of the SV40 T-antigen origin binding domain in complex with DNA
-
Meinke, G., Phelan, P., Moine, S., Bochkareva, E., Bochkarev, A., Bullock, P.A., and Bohm, A. 2007. The crystal structure of the SV40 T-antigen origin binding domain in complex with DNA. PLoS Biol 5:e23.
-
(2007)
PLoS Biol
, vol.5
-
-
Meinke, G.1
Phelan, P.2
Moine, S.3
Bochkareva, E.4
Bochkarev, A.5
Bullock, P.A.6
Bohm, A.7
-
157
-
-
0344198460
-
Perpetuating the double helix: Molecular machines at eukaryotic DNA replication origins
-
Mendez, J., and Stillman, B. 2003. Perpetuating the double helix: molecular machines at eukaryotic DNA replication origins. Bioessays 25:1158-1167.
-
(2003)
Bioessays
, vol.25
, pp. 1158-1167
-
-
Mendez, J.1
Stillman, B.2
-
158
-
-
0029037088
-
E1 recognition sequences in the bovine papillomavirus type 1 origin of DNA replication: Interaction between half sites of the inverted repeats
-
Mendoza, R., Gandhi, L., and Botchan, M.R. 1995. E1 recognition sequences in the bovine papillomavirus type 1 origin of DNA replication: interaction between half sites of the inverted repeats. J Virol 69:3789-3798.
-
(1995)
J Virol
, vol.69
, pp. 3789-3798
-
-
Mendoza, R.1
Gandhi, L.2
Botchan, M.R.3
-
159
-
-
0036843139
-
The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication
-
Messer, W. 2002. The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication. FEMS Microbiol Rev 26:355-374.
-
(2002)
FEMS Microbiol Rev
, vol.26
, pp. 355-374
-
-
Messer, W.1
-
160
-
-
0032736348
-
Functional domains of DnaA proteins
-
Messer, W., Blaesing, F., Majka, J., Nardmann, J., Schaper, S., Schmidt, A., Seitz, H., Speck, C., Tungler, D., Wegrzyn, G. et al. 1999. Functional domains of DnaA proteins Biochimie 81:819-825.
-
(1999)
Biochimie
, vol.81
, pp. 819-825
-
-
Messer, W.1
Blaesing, F.2
Majka, J.3
Nardmann, J.4
Schaper, S.5
Schmidt, A.6
Seitz, H.7
Speck, C.8
Tungler, D.9
Wegrzyn, G.10
-
161
-
-
0030888558
-
DnaA initiator-also a transcription factor
-
Messer, W., and Weigel, C. 1997. DnaA initiator-also a transcription factor. Mol Microbiol 24:1-6.
-
(1997)
Mol Microbiol
, vol.24
, pp. 1-6
-
-
Messer, W.1
Weigel, C.2
-
162
-
-
25444480278
-
Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis
-
Miyata, T., Suzuki, H., Oyama, T., Mayanagi, K., Ishino, Y., and Morikawa, K. 2005. Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis. Proc Natl Acad Sci USA 102:13795-13800.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 13795-13800
-
-
Miyata, T.1
Suzuki, H.2
Oyama, T.3
Mayanagi, K.4
Ishino, Y.5
Morikawa, K.6
-
163
-
-
0025613266
-
Targeting the E1 replication protein to the papillomavirus origin of replication by complex formation with the E2 transactivator
-
Mohr, I.J., Clark, R., Sun, S., Androphy, E.J., MacPherson, P., and Botchan, M.R. 1990. Targeting the E1 replication protein to the papillomavirus origin of replication by complex formation with the E2 transactivator. Science 250:1694-1699.
-
(1990)
Science
, vol.250
, pp. 1694-1699
-
-
Mohr, I.J.1
Clark, R.2
Sun, S.3
Androphy, E.J.4
MacPherson, P.5
Botchan, M.R.6
-
164
-
-
0020120095
-
Cold-sensitive cell-division-cycle mutants of yeast: Isolation, properties, and pseudoreversion studies
-
Moir, D., Stewart, S.E., Osmond, B.C., and Botstein, D. 1982. Cold-sensitive cell-division-cycle mutants of yeast: isolation, properties, and pseudoreversion studies. Genetics 100:547-563.
-
(1982)
Genetics
, vol.100
, pp. 547-563
-
-
Moir, D.1
Stewart, S.E.2
Osmond, B.C.3
Botstein, D.4
-
165
-
-
34247271405
-
DNA replication initiation: Mechanisms and regulation in bacteria
-
Mott, M.L., and Berger, J.M. 2007. DNA replication initiation: mechanisms and regulation in bacteria. Nat Rev Microbiol 5:343-354.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 343-354
-
-
Mott, M.L.1
Berger, J.M.2
-
166
-
-
33745925880
-
Isolation of the Cdc45/Mcm2-7/GINS (CMG) complex, a candidate for the eukaryotic DNA replication fork helicase
-
Moyer, S.E., Lewis, P.W., and Botchan, M.R. 2006. Isolation of the Cdc45/Mcm2-7/GINS (CMG) complex, a candidate for the eukaryotic DNA replication fork helicase. Proc Natl Acad Sci USA 103:10236-10241.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 10236-10241
-
-
Moyer, S.E.1
Lewis, P.W.2
Botchan, M.R.3
-
167
-
-
0034705420
-
Bacterial mode of replication with eukaryotic-like machinery in a hyperthermophilic archaeon
-
Myllykallio, H., Lopez, P., Lopez-Garcia, P., Heilig, R., Saurin, W., Zivanovic, Y., Philippe, H., and Forterre, P. 2000. Bacterial mode of replication with eukaryotic-like machinery in a hyperthermophilic archaeon. Science 288:2212-2215.
-
(2000)
Science
, vol.288
, pp. 2212-2215
-
-
Myllykallio, H.1
Lopez, P.2
Lopez-Garcia, P.3
Heilig, R.4
Saurin, W.5
Zivanovic, Y.6
Philippe, H.7
Forterre, P.8
-
168
-
-
0029019805
-
Assembly of a chromosomal replication machine: Two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. II. Intermediate complex between the clamp loader and its clamp
-
Naktinis, V., Onrust, R., Fang, L., and O'Donnell, M. 1995. Assembly of a chromosomal replication machine: two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. II. Intermediate complex between the clamp loader and its clamp. J Biol Chem 270:13358-13365.
-
(1995)
J Biol Chem
, vol.270
, pp. 13358-13365
-
-
Naktinis, V.1
Onrust, R.2
Fang, L.3
O'Donnell, M.4
-
169
-
-
0030070111
-
A molecular switch in a replication machine defined by an internal competition for protein rings
-
Naktinis, V., Turner, J., and O'Donnell, M. 1996. A molecular switch in a replication machine defined by an internal competition for protein rings. Cell 84:137-145.
-
(1996)
Cell
, vol.84
, pp. 137-145
-
-
Naktinis, V.1
Turner, J.2
O'Donnell, M.3
-
170
-
-
34547676738
-
Structural similarity between the DnaA-binding proteins HobA (HP1230) from Helicobacter pylori and DiaA from Escherichia coli
-
Natrajan, G., Hall, D.R., Thompson, A.C., Gutsche, I., and Terradot, L. 2007. Structural similarity between the DnaA-binding proteins HobA (HP1230) from Helicobacter pylori and DiaA from Escherichia coli. Mol Microbiol 65:995-1005.
-
(2007)
Mol Microbiol
, vol.65
, pp. 995-1005
-
-
Natrajan, G.1
Hall, D.R.2
Thompson, A.C.3
Gutsche, I.4
Terradot, L.5
-
171
-
-
0032969563
-
AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes
-
Neuwald, A.F., Aravind, L., Spouge, J.L., and Koonin, E.V. 1999. AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 9:27-43.
-
(1999)
Genome Res
, vol.9
, pp. 27-43
-
-
Neuwald, A.F.1
Aravind, L.2
Spouge, J.L.3
Koonin, E.V.4
-
172
-
-
12944270421
-
Genome sequence of Halobacterium species NRC-1
-
Ng, W.V., Kennedy, S.P., Mahairas, G.G., Berquist, B., Pan, M., Shukla, H.D., Lasky, S.R., Baliga, N.S., Thorsson, V., Sbrogna, J. et al. 2000. Genome sequence of Halobacterium species NRC-1. Proc Natl Acad Sci USA 97:12176-12181.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 12176-12181
-
-
Ng, W.V.1
Kennedy, S.P.2
Mahairas, G.G.3
Berquist, B.4
Pan, M.5
Shukla, H.D.6
Lasky, S.R.7
Baliga, N.S.8
Thorsson, V.9
Sbrogna, J.10
-
173
-
-
33750987654
-
SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC
-
Nievera, C., Torgue, J.J., Grimwade, J.E., and Leonard, A.C. 2006. SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC. Mol Cell 24:581-592.
-
(2006)
Mol Cell
, vol.24
, pp. 581-592
-
-
Nievera, C.1
Torgue, J.J.2
Grimwade, J.E.3
Leonard, A.C.4
-
174
-
-
0037177830
-
A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: Evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo
-
Nishida, S., Fujimitsu, K., Sekimizu, K., Ohmura, T., Ueda, T., and Katayama, T. 2002. A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo. J Biol Chem 277:14986-14995.
-
(2002)
J Biol Chem
, vol.277
, pp. 14986-14995
-
-
Nishida, S.1
Fujimitsu, K.2
Sekimizu, K.3
Ohmura, T.4
Ueda, T.5
Katayama, T.6
-
175
-
-
0034611749
-
The Cdt1 protein is required to license DNA for replication in fission yeast
-
Nishitani, H., Lygerou, Z., Nishimoto, T., and Nurse, P. 2000. The Cdt1 protein is required to license DNA for replication in fission yeast. Nature 404:625-628.
-
(2000)
Nature
, vol.404
, pp. 625-628
-
-
Nishitani, H.1
Lygerou, Z.2
Nishimoto, T.3
Nurse, P.4
-
176
-
-
34249714815
-
Genetic and physical mapping of DNA replication origins in Haloferax volcanii
-
Norais, C., Hawkins, M., Hartman, A.L., Eisen, J.A., Myllykallio, H., and Allers, T. 2007. Genetic and physical mapping of DNA replication origins in Haloferax volcanii. PLoS Genet 3:e77.
-
(2007)
PLoS Genet
, vol.3
-
-
Norais, C.1
Hawkins, M.2
Hartman, A.L.3
Eisen, J.A.4
Myllykallio, H.5
Allers, T.6
-
177
-
-
32344441229
-
Clamp loaders and replication initiation
-
O'Donnell, M., and Kuriyan, J. 2006. Clamp loaders and replication initiation. Curr Opin Struct Biol 16:35-41.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 35-41
-
-
O'Donnell, M.1
Kuriyan, J.2
-
178
-
-
0036015656
-
The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli
-
Ogawa, T., Yamada, Y., Kuroda, T., Kishi, T., and Moriya, S. 2002. The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli. Mol Microbiol 44:1367-1375.
-
(2002)
Mol Microbiol
, vol.44
, pp. 1367-1375
-
-
Ogawa, T.1
Yamada, Y.2
Kuroda, T.3
Kishi, T.4
Moriya, S.5
-
179
-
-
1642377971
-
Conserved arginine residues implicated in ATP hydrolysis, nucleotide-sensing, and inter-subunit interactions in AAA and AAA+ATPases
-
Ogura, T., Whiteheart, S.W., and Wilkinson, A.J. 2004. Conserved arginine residues implicated in ATP hydrolysis, nucleotide-sensing, and inter-subunit interactions in AAA and AAA+ATPases. J Struct Biol 146:106-112.
-
(2004)
J Struct Biol
, vol.146
, pp. 106-112
-
-
Ogura, T.1
Whiteheart, S.W.2
Wilkinson, A.J.3
-
180
-
-
0034885052
-
AAA+ superfamily ATPases: Common structure-diverse function
-
Ogura, T., and Wilkinson, A.J. 2001. AAA+ superfamily ATPases: common structure-diverse function. Genes Cells 6:575-597.
-
(2001)
Genes Cells
, vol.6
, pp. 575-597
-
-
Ogura, T.1
Wilkinson, A.J.2
-
181
-
-
0029058292
-
Assembly of a chromosomal replication machine: Two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. I. Organization of the clamp loader
-
Onrust, R. 1995. Assembly of a chromosomal replication machine: two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. I.
-
(1995)
J Biol Chem
, vol.270
, pp. 13348-13357
-
-
Onrust, R.1
-
182
-
-
0025885734
-
Analysis of the ATPase subassembly which initiates processive DNA synthesis by DNA polymerase III holoenzyme
-
Onrust, R. 1991. Analysis of the ATPase subassembly which initiates processive DNA synthesis by DNA polymerase III holoenzyme. J Biol Chem 266:21681-21686.
-
(1991)
J Biol Chem
, vol.266
, pp. 21681-21686
-
-
Onrust, R.1
-
183
-
-
43749087597
-
A common mechanism for the ATP-DnaA-dependent formation of open complexes at the replication origin
-
Ozaki, S., Kawakami, H., Nakamura, K., Fujikawa, N., Kagawa, W., Park, S.Y., Yokoyama, S., Kurumizaka, H., and Katayama, T. 2008. A common mechanism for the ATP-DnaA-dependent formation of open complexes at the replication origin. J Biol Chem 283:8351-8362.
-
(2008)
J Biol Chem
, vol.283
, pp. 8351-8362
-
-
Ozaki, S.1
Kawakami, H.2
Nakamura, K.3
Fujikawa, N.4
Kagawa, W.5
Park, S.Y.6
Yokoyama, S.7
Kurumizaka, H.8
Katayama, T.9
-
184
-
-
32444450705
-
Localization of MCM2-7, Cdc45, and GINS to the site of DNA unwinding during eukaryotic DNA replication
-
Pacek, M., Tutter, A.V., Kubota, Y., Takisawa, H., and Walter, J.C. 2006. Localization of MCM2-7, Cdc45, and GINS to the site of DNA unwinding during eukaryotic DNA replication. Mol Cell 21:581-587.
-
(2006)
Mol Cell
, vol.21
, pp. 581-587
-
-
Pacek, M.1
Tutter, A.V.2
Kubota, Y.3
Takisawa, H.4
Walter, J.C.5
-
185
-
-
5044236667
-
A requirement for MCM7 and Cdc45 in chromosome unwinding during eukaryotic DNA replication
-
Pacek, M., and Walter, J.C. 2004. A requirement for MCM7 and Cdc45 in chromosome unwinding during eukaryotic DNA replication. EMBO J 23:3667-3676.
-
(2004)
EMBO J
, vol.23
, pp. 3667-3676
-
-
Pacek, M.1
Walter, J.C.2
-
186
-
-
0348133607
-
Hexameric ring structure of the full-length archaeal MCM protein complex
-
4:1079-1083
-
Pape, T. 2003. Hexameric ring structure of the full-length archaeal MCM protein complex. EMBO Reports 4:1079-1083.
-
(2003)
EMBO Reports
-
-
Pape, T.1
-
187
-
-
0032110626
-
Nucleotide-dependent prereplicative complex assembly by Cdc6p, a homolog of eukaryotic and prokaryotic clamp-loaders
-
Perkins, G., and Diffley, J.F. 1998. Nucleotide-dependent prereplicative complex assembly by Cdc6p, a homolog of eukaryotic and prokaryotic clamp-loaders. Mol Cell 2:23-32.
-
(1998)
Mol Cell
, vol.2
, pp. 23-32
-
-
Perkins, G.1
Diffley, J.F.2
-
188
-
-
0030782227
-
Role of architectural elements in combinatorial regulation of initiation of DNA replication in Escherichia coli
-
Polaczek, P. 1997. Role of architectural elements in combinatorial regulation of initiation of DNA replication in Escherichia coli. Mol Microbiol 26:261-275.
-
(1997)
Mol Microbiol
, vol.26
, pp. 261-275
-
-
Polaczek, P.1
-
189
-
-
0025370024
-
Bending of the origin of replication of E. coli by binding of IHF at a specific site
-
Polaczek, P. 1990. Bending of the origin of replication of E. coli by binding of IHF at a specific site. New Biologist. 2:265-271.
-
(1990)
New Biologist
, vol.2
, pp. 265-271
-
-
Polaczek, P.1
-
190
-
-
0035197623
-
Completion of replication map of Saccharomyces cerevisiae chromosome III
-
Poloumienko, A. 2001. Completion of replication map of Saccharomyces cerevisiae chromosome III. Molecular Biol Cell. 12:3317-3327.
-
(2001)
Molecular Biol Cell
, vol.12
, pp. 3317-3327
-
-
Poloumienko, A.1
-
191
-
-
0023128784
-
The cell-cycle regulated proliferating cell nuclear antigen is required for SV40 DNA replication in vitro
-
Prelich, G., Kostura, M., Marshak, D.R., Mathews, M.B., and Stillman, B. 1987. The cell-cycle regulated proliferating cell nuclear antigen is required for SV40 DNA replication in vitro. Nature 326:471-475.
-
(1987)
Nature
, vol.326
, pp. 471-475
-
-
Prelich, G.1
Kostura, M.2
Marshak, D.R.3
Mathews, M.B.4
Stillman, B.5
-
192
-
-
0034423473
-
A novel assembly mechanism for the DNA polymerase III holoenzyme DnaX complex: Association of deltadelta' with DnaX(4) forms DnaX(3)deltadelta'
-
Pritchard, A. 2000. A novel assembly mechanism for the DNA polymerase III holoenzyme DnaX complex: association of deltadelta' with DnaX(4) forms DnaX(3)deltadelta'. The EMBO J 19:6536-6545.
-
(2000)
The EMBO J
, vol.19
, pp. 6536-6545
-
-
Pritchard, A.1
-
193
-
-
29544435484
-
Sequential ATP hydrolysis by Cdc6 and ORC directs loading of the Mcm2-7 helicase
-
Randell, J.C., Bowers, J.L., Rodriguez, H.K., and Bell, S.P. 2006. Sequential ATP hydrolysis by Cdc6 and ORC directs loading of the Mcm2-7 helicase. Mol Cell 21:29-39.
-
(2006)
Mol Cell
, vol.21
, pp. 29-39
-
-
Randell, J.C.1
Bowers, J.L.2
Rodriguez, H.K.3
Bell, S.P.4
-
194
-
-
0026705907
-
Functional characterization of temperature-sensitive mutants of simian virus 40 large T antigen
-
Ray, S., Anderson, M.E., Loeber, G., McVey, D., and Tegtmeyer, P. 1992. Functional characterization of temperature-sensitive mutants of simian virus 40 large T antigen. J Virol 66:6509-6516.
-
(1992)
J Virol
, vol.66
, pp. 6509-6516
-
-
Ray, S.1
Anderson, M.E.2
Loeber, G.3
McVey, D.4
Tegtmeyer, P.5
-
195
-
-
1542317691
-
Interactions required for binding of simian virus 40 T antigen to the viral origin and molecular modeling of initial assembly events
-
Reese, D.K., Sreekumar, K.R., and Bullock, P.A. 2004. Interactions required for binding of simian virus 40 T antigen to the viral origin and molecular modeling of initial assembly events. J Virol 78:2921-2934.
-
(2004)
J Virol
, vol.78
, pp. 2921-2934
-
-
Reese, D.K.1
Sreekumar, K.R.2
Bullock, P.A.3
-
196
-
-
1842509904
-
DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding
-
Remus, D., Beall, E.L., and Botchan, M.R. 2004. DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding. EMBO J 23:897-907.
-
(2004)
EMBO J
, vol.23
, pp. 897-907
-
-
Remus, D.1
Beall, E.L.2
Botchan, M.R.3
-
197
-
-
0030451819
-
Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn
-
Rice, P.A., Yang, S., Mizuuchi, K., and Nash, H.A. 1996. Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn. Cell 87:1295-1306.
-
(1996)
Cell
, vol.87
, pp. 1295-1306
-
-
Rice, P.A.1
Yang, S.2
Mizuuchi, K.3
Nash, H.A.4
-
198
-
-
23644448872
-
Origins of DNA replication in the three domains of life
-
Robinson, N.P., and Bell, S.D. 2005. Origins of DNA replication in the three domains of life. FEBS J 272:3757-3766.
-
(2005)
FEBS J
, vol.272
, pp. 3757-3766
-
-
Robinson, N.P.1
Bell, S.D.2
-
199
-
-
33846954355
-
Sister chromatid junctions in the hyperthermophilic archaeon Sulfolobus solfataricus
-
Robinson, N.P., Blood, K.A., McCallum, S.A., Edwards, P.A., and Bell, S.D. 2007. Sister chromatid junctions in the hyperthermophilic archaeon Sulfolobus solfataricus. EMBO J 26:816-824.
-
(2007)
EMBO J
, vol.26
, pp. 816-824
-
-
Robinson, N.P.1
Blood, K.A.2
McCallum, S.A.3
Edwards, P.A.4
Bell, S.D.5
-
200
-
-
0742269690
-
Identification of two origins of replication in the single chromosome of the archaeon Sulfolobus solfataricus
-
Robinson, N.P., Dionne, I., Lundgren, M., Marsh, V.L., Bernander, R., and Bell, S.D. 2004. Identification of two origins of replication in the single chromosome of the archaeon Sulfolobus solfataricus. Cell 116: 25-38.
-
(2004)
Cell
, vol.116
, pp. 25-38
-
-
Robinson, N.P.1
Dionne, I.2
Lundgren, M.3
Marsh, V.L.4
Bernander, R.5
Bell, S.D.6
-
201
-
-
0028575868
-
Functions of histone-like proteins in the initiation of DNA replication at oriC of Escherichia coli
-
Roth, A. 1994. Functions of histone-like proteins in the initiation of DNA replication at oriC of Escherichia coli. Biochimie 76:917-923.
-
(1994)
Biochimie
, vol.76
, pp. 917-923
-
-
Roth, A.1
-
202
-
-
0029030019
-
The DNA binding domain of the initiator protein DnaA
-
Roth, A., and Messer, W. 1995. The DNA binding domain of the initiator protein DnaA. EMBO J 14:2106-2111.
-
(1995)
EMBO J
, vol.14
, pp. 2106-2111
-
-
Roth, A.1
Messer, W.2
-
203
-
-
1542407109
-
Escherichia coli prereplication complex assembly is regulated by dynamic interplay among Fis, IHF and DnaA
-
Ryan, V.T., Grimwade, J.E., Camara, J.E., Crooke, E., and Leonard, A.C. 2004. Escherichia coli prereplication complex assembly is regulated by dynamic interplay among Fis, IHF and DnaA. Mol Microbiol 51:1347-1359.
-
(2004)
Mol Microbiol
, vol.51
, pp. 1347-1359
-
-
Ryan, V.T.1
Grimwade, J.E.2
Camara, J.E.3
Crooke, E.4
Leonard, A.C.5
-
204
-
-
0019987540
-
Continuous synthesis of the dnaA gene product of Escherichia coli in the cell cycle
-
Sakakibara, Y., and Yuasa, S. 1982. Continuous synthesis of the dnaA gene product of Escherichia coli in the cell cycle. Mol Gen Genet 186:87-94.
-
(1982)
Mol Gen Genet
, vol.186
, pp. 87-94
-
-
Sakakibara, Y.1
Yuasa, S.2
-
205
-
-
0032401759
-
Recruitment and loading of the E1 initiator protein: An ATP-dependent process catalysed by a transcription factor
-
Sanders, C.M., and Stenlund, A. 1998. Recruitment and loading of the E1 initiator protein: an ATP-dependent process catalysed by a transcription factor. EMBO J 17:7044-7055.
-
(1998)
EMBO J
, vol.17
, pp. 7044-7055
-
-
Sanders, C.M.1
Stenlund, A.2
-
206
-
-
0034647412
-
Electron microscopic observation and single-stranded DNA binding activity of the Mcm4,6,7 complex
-
Sato, M. 2000. Electron microscopic observation and single-stranded DNA binding activity of the Mcm4,6,7 complex. J Mol Biol. 300:421-431.
-
(2000)
J Mol Biol
, vol.300
, pp. 421-431
-
-
Sato, M.1
-
207
-
-
0034975987
-
Mutational analysis of conserved sequence motifs in the budding yeast Cdc6 protein
-
Schepers, A., and Diffley, J.F. 2001. Mutational analysis of conserved sequence motifs in the budding yeast Cdc6 protein. J Mol Biol 308:597-608.
-
(2001)
J Mol Biol
, vol.308
, pp. 597-608
-
-
Schepers, A.1
Diffley, J.F.2
-
208
-
-
33947226399
-
ATP-dependent minor groove recognition of TA base pairs is required for template melting by the E1 initiator protein
-
Schuck, S., and Stenlund, A. 2007.ATP-dependent minor groove recognition of TA base pairs is required for template melting by the E1 initiator protein. J Virol 81:3293-3302.
-
(2007)
J Virol
, vol.81
, pp. 3293-3302
-
-
Schuck, S.1
Stenlund, A.2
-
209
-
-
27644484567
-
Assembly of a double hexameric helicase
-
Schuck, S., and Stenlund, A. 2005. Assembly of a double hexameric helicase. Mol Cell 20:377-389.
-
(2005)
Mol Cell
, vol.20
, pp. 377-389
-
-
Schuck, S.1
Stenlund, A.2
-
210
-
-
0031926580
-
The papillomavirus E1 protein forms a DNA-dependent hexameric complex with ATPase and DNA helicase activities
-
Sedman, J., and Stenlund, A. 1998. The papillomavirus E1 protein forms a DNA-dependent hexameric complex with ATPase and DNA helicase activities. J Virol 72:6893-6897.
-
(1998)
J Virol
, vol.72
, pp. 6893-6897
-
-
Sedman, J.1
Stenlund, A.2
-
211
-
-
0029815671
-
The initiator protein E1 binds to the bovine papillomavirus origin of replication as a trimeric ring-like structure
-
Sedman, J., and Stenlund, A. 1996. The initiator protein E1 binds to the bovine papillomavirus origin of replication as a trimeric ring-like structure. EMBO J 15:5085-5092.
-
(1996)
EMBO J
, vol.15
, pp. 5085-5092
-
-
Sedman, J.1
Stenlund, A.2
-
212
-
-
0029617680
-
Co-operative interaction between the initiator E1 and the transcriptional activator E2 is required for replicator specific DNA replication of bovine papillomavirus in vivo and in vitro
-
Sedman, J., and Stenlund, A. 1995. Co-operative interaction between the initiator E1 and the transcriptional activator E2 is required for replicator specific DNA replication of bovine papillomavirus in vivo and in vitro. EMBO J 14:6218-6228.
-
(1995)
EMBO J
, vol.14
, pp. 6218-6228
-
-
Sedman, J.1
Stenlund, A.2
-
213
-
-
0033812649
-
The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli
-
Seitz, H., Weigel, C., and Messer, W. 2000. The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli. Mol Microbiol 37:1270-1279.
-
(2000)
Mol Microbiol
, vol.37
, pp. 1270-1279
-
-
Seitz, H.1
Weigel, C.2
Messer, W.3
-
214
-
-
0034687677
-
Stepwise assembly of initiation proteins at budding yeast replication origins in vitro
-
Seki, T., and Diffley, J.F. 2000. Stepwise assembly of initiation proteins at budding yeast replication origins in vitro. Proc Natl Acad Sci USA 97:14115-14120.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 14115-14120
-
-
Seki, T.1
Diffley, J.F.2
-
215
-
-
0023658349
-
ATP activates dnaA protein in initiating replication of plasmids bearing the origin of the E. coli chromosome
-
Sekimizu, K., Bramhill, D., and Kornberg, A. 1987. ATP activates dnaA protein in initiating replication of plasmids bearing the origin of the E. coli chromosome. Cell 50:259-265.
-
(1987)
Cell
, vol.50
, pp. 259-265
-
-
Sekimizu, K.1
Bramhill, D.2
Kornberg, A.3
-
216
-
-
0027402449
-
Bovine papilloma virus (BPV)-encoded E1 protein contains multiple activities required for BPV DNA replication
-
Seo, Y.S., Muller, F., Lusky, M., and Hurwitz, J. 1993. Bovine papilloma virus (BPV)-encoded E1 protein contains multiple activities required for BPV DNA replication. Proc Natl Acad Sci USA 90:702-706.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 702-706
-
-
Seo, Y.S.1
Muller, F.2
Lusky, M.3
Hurwitz, J.4
-
217
-
-
0037109208
-
Biochemical characterisation of the clamp/clamp loader proteins from the euryarchaeon Archaeoglobus fulgidus
-
Seybert, A., Scott, D.J., Scaife, S., Singleton, M.R., and Wigley, D.B. 2002. Biochemical characterisation of the clamp/clamp loader proteins from the euryarchaeon Archaeoglobus fulgidus. Nucleic Acids Res 30:4329-4338.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 4329-4338
-
-
Seybert, A.1
Scott, D.J.2
Scaife, S.3
Singleton, M.R.4
Wigley, D.B.5
-
218
-
-
33646778502
-
Communication between subunits within an archaeal clamp-loader complex
-
Seybert, A., Singleton, M.R., Cook, N., Hall, D.R., and Wigley, D.B. 2006. Communication between subunits within an archaeal clamp-loader complex. EMBO J 25:2209-2218.
-
(2006)
EMBO J
, vol.25
, pp. 2209-2218
-
-
Seybert, A.1
Singleton, M.R.2
Cook, N.3
Hall, D.R.4
Wigley, D.B.5
-
219
-
-
1942503398
-
Distinct roles for ATP binding and hydrolysis at individual subunits of an archaeal clamp loader
-
Seybert, A., and Wigley, D.B. 2004. Distinct roles for ATP binding and hydrolysis at individual subunits of an archaeal clamp loader. EMBO J 23:1360-1371.
-
(2004)
EMBO J
, vol.23
, pp. 1360-1371
-
-
Seybert, A.1
Wigley, D.B.2
-
220
-
-
0034945083
-
The complete genome of the crenarchaeon Sulfolobus solfataricus P2
-
She, Q., Singh, R.K., Confalonieri, F., Zivanovic, Y., Allard, G., Awayez, M.J., Chan-Weiher, C.C., Clausen, I.G., Curtis, B.A., De Moors, A. et al. 2001. The complete genome of the crenarchaeon Sulfolobus solfataricus P2 Proc Natl Acad Sci USA 98:7835-7840.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 7835-7840
-
-
She, Q.1
Singh, R.K.2
Confalonieri, F.3
Zivanovic, Y.4
Allard, G.5
Awayez, M.J.6
Chan-Weiher, C.C.7
Clausen, I.G.8
Curtis, B.A.9
De Moors, A.10
-
221
-
-
0034686021
-
The intrinsic DNA helicase activity of Methanobacterium thermoautotrophicum delta H minichromosome maintenance protein
-
Shechter, D.F., Ying, C.Y., and Gautier, J. 2000. The intrinsic DNA helicase activity of Methanobacterium thermoautotrophicum delta H minichromosome maintenance protein. J Biol Chem. 275:15049-15059.
-
(2000)
J Biol Chem
, vol.275
, pp. 15049-15059
-
-
Shechter, D.F.1
Ying, C.Y.2
Gautier, J.3
-
222
-
-
23844481082
-
The roles of the residues on the channel beta-hairpin and loop structures of simian virus 40 hexameric helicase
-
Shen, J., Gai, D., Patrick, A., Greenleaf, W.B., and Chen, X.S. 2005. The roles of the residues on the channel beta-hairpin and loop structures of simian virus 40 hexameric helicase. Proc Natl Acad Sci USA 102:11248-11253.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11248-11253
-
-
Shen, J.1
Gai, D.2
Patrick, A.3
Greenleaf, W.B.4
Chen, X.S.5
-
223
-
-
0141620384
-
Regulation of minichromosome maintenance helicase activity by Cdc6
-
Shin, J.H., Grabowski, B., Kasiviswanathan, R., Bell, S.D., and Kelman, Z. 2003. Regulation of minichromosome maintenance helicase activity by Cdc6. J Biol Chem 278:38059-38067.
-
(2003)
J Biol Chem
, vol.278
, pp. 38059-38067
-
-
Shin, J.H.1
Grabowski, B.2
Kasiviswanathan, R.3
Bell, S.D.4
Kelman, Z.5
-
224
-
-
0027310940
-
Biochemical analysis of mutants with changes in the origin-binding domain of simian virus 40 tumor antigen
-
Simmons, D.T., Upson, R., Wun-Kim, K., and Young, W. 1993. Biochemical analysis of mutants with changes in the origin-binding domain of simian virus 40 tumor antigen. J Virol 67:4227-4236.
-
(1993)
J Virol
, vol.67
, pp. 4227-4236
-
-
Simmons, D.T.1
Upson, R.2
Wun-Kim, K.3
Young, W.4
-
225
-
-
4744353204
-
Conformational changes induced by nucleotide binding in Cdc6/ORC from Aeropyrum pernix
-
Singleton, M.R., Morales, R., Grainge, I., Cook, N., Isupov, M.N., and Wigley, D.B. 2004. Conformational changes induced by nucleotide binding in Cdc6/ORC from Aeropyrum pernix. J Mol Biol 343:547-557.
-
(2004)
J Mol Biol
, vol.343
, pp. 547-557
-
-
Singleton, M.R.1
Morales, R.2
Grainge, I.3
Cook, N.4
Isupov, M.N.5
Wigley, D.B.6
-
226
-
-
0029147297
-
-
Slater, S., Wold, S., Lu, M., Boye, E., Skarstad, K., and Kleckner, N. 1995. E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration. Cell 82:927-936.
-
Slater, S., Wold, S., Lu, M., Boye, E., Skarstad, K., and Kleckner, N. 1995. E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration. Cell 82:927-936.
-
-
-
-
227
-
-
29544446184
-
ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA
-
Speck, C., Chen, Z., Li, H., and Stillman, B. 2005. ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. Nat Struct Mol Biol 12:965-971.
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 965-971
-
-
Speck, C.1
Chen, Z.2
Li, H.3
Stillman, B.4
-
228
-
-
0035869023
-
Mechanism of origin unwinding: Sequential binding of DnaA to double- and single-stranded DNA
-
Speck, C., and Messer, W. 2001. Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA. EMBO J 20:1469-1476.
-
(2001)
EMBO J
, vol.20
, pp. 1469-1476
-
-
Speck, C.1
Messer, W.2
-
229
-
-
34249739682
-
Cdc6 ATPase activity regulates ORC x Cdc6 stability and the selection of specific DNA sequences as origins of DNA replication
-
Speck, C., and Stillman, B. 2007. Cdc6 ATPase activity regulates ORC x Cdc6 stability and the selection of specific DNA sequences as origins of DNA replication. J Biol Chem 282:11705-11714.
-
(2007)
J Biol Chem
, vol.282
, pp. 11705-11714
-
-
Speck, C.1
Stillman, B.2
-
230
-
-
0033229814
-
ATP- and ADP-dnaA protein, a molecular switch in gene regulation
-
Speck, C., Weigel, C., and Messer, W. 1999. ATP- and ADP-dnaA protein, a molecular switch in gene regulation. EMBO J 18:6169-6176.
-
(1999)
EMBO J
, vol.18
, pp. 6169-6176
-
-
Speck, C.1
Weigel, C.2
Messer, W.3
-
231
-
-
0022763344
-
DNA helicase activity of SV40 large tumor antigen
-
Stahl, H., Droge, P., and Knippers, R. 1986. DNA helicase activity of SV40 large tumor antigen. EMBO J. 5:1939-1944.
-
(1986)
EMBO J
, vol.5
, pp. 1939-1944
-
-
Stahl, H.1
Droge, P.2
Knippers, R.3
-
232
-
-
0141891451
-
Initiation of DNA replication: Lessons from viral initiator proteins
-
Stenlund, A. 2003. Initiation of DNA replication: lessons from viral initiator proteins. Nat Rev Mol Cell Biol 4:777-785.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 777-785
-
-
Stenlund, A.1
-
233
-
-
0026584599
-
Structure of the recA protein-ADP complex
-
Story, R.M., and Steitz, T.A. 1992. Structure of the recA protein-ADP complex. Nature 355:374-376.
-
(1992)
Nature
, vol.355
, pp. 374-376
-
-
Story, R.M.1
Steitz, T.A.2
-
234
-
-
14844288292
-
Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex
-
Su'etsugu, M., Shimuta, T.R., Ishida, T., Kawakami, H., and Katayama, T. 2005. Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex. J Biol Chem 280:6528-6536.
-
(2005)
J Biol Chem
, vol.280
, pp. 6528-6536
-
-
Su'etsugu, M.1
Shimuta, T.R.2
Ishida, T.3
Kawakami, H.4
Katayama, T.5
-
235
-
-
3042815929
-
Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: Interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex
-
Su'etsugu, M., Takata, M., Kubota, T., Matsuda, Y., and Katayama, T. 2004. Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex. Genes Cells 9:509-522.
-
(2004)
Genes Cells
, vol.9
, pp. 509-522
-
-
Su'etsugu, M.1
Takata, M.2
Kubota, T.3
Matsuda, Y.4
Katayama, T.5
-
236
-
-
33845500268
-
Stepwise binding and bending of DNA by Escherichia coli integration host factor
-
Sugimura, S., and Crothers, D.M. 2006. Stepwise binding and bending of DNA by Escherichia coli integration host factor. Proc Natl Acad Sci USA 103:18510-18514.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 18510-18514
-
-
Sugimura, S.1
Crothers, D.M.2
-
237
-
-
0032545466
-
Escherichia coli DnaA protein. The N-terminal domain and loading of DnaB helicase at the E. coli chromosomal origin
-
Sutton, M.D., Carr, K.M., Vicente, M., and Kaguni, J.M. 1998. Escherichia coli DnaA protein. The N-terminal domain and loading of DnaB helicase at the E. coli chromosomal origin. J Biol Chem 273:34255-34262.
-
(1998)
J Biol Chem
, vol.273
, pp. 34255-34262
-
-
Sutton, M.D.1
Carr, K.M.2
Vicente, M.3
Kaguni, J.M.4
-
238
-
-
0031565989
-
The Escherichia coli dnaA gene: Four functional domains
-
Sutton, M.D., and Kaguni, J.M. 1997. The Escherichia coli dnaA gene: four functional domains. J Mol Biol 274:546-561.
-
(1997)
J Mol Biol
, vol.274
, pp. 546-561
-
-
Sutton, M.D.1
Kaguni, J.M.2
-
239
-
-
22744445013
-
Pumps, paradoxes and ploughshares: Mechanism of the MCM2-7DNAhelicase
-
Takahashi, T.S., Wigley, D.B., and Walter, J.C. 2005. Pumps, paradoxes and ploughshares: mechanism of the MCM2-7DNAhelicase. Trends Biochem Sci 30:437-444.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 437-444
-
-
Takahashi, T.S.1
Wigley, D.B.2
Walter, J.C.3
-
240
-
-
0037847620
-
GINS, a novel multiprotein complex required for chromosomal DNA replication in budding yeast
-
Takayama, Y., Kamimura, Y., Okawa, M., Muramatsu, S., Sugino, A., and Araki, H. 2003. GINS, a novel multiprotein complex required for chromosomal DNA replication in budding yeast. Genes Dev 17:1153-1165.
-
(2003)
Genes Dev
, vol.17
, pp. 1153-1165
-
-
Takayama, Y.1
Kamimura, Y.2
Okawa, M.3
Muramatsu, S.4
Sugino, A.5
Araki, H.6
-
241
-
-
0030924440
-
The ARS309 chromosomal replicator of Saccharomyces cerevisiae depends on an exceptional ARS consensus sequence
-
Theis, J.F., and Newlon, C.S. 1997. The ARS309 chromosomal replicator of Saccharomyces cerevisiae depends on an exceptional ARS consensus sequence. Proc Natl Acad Sci USA 94:10786-10791.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 10786-10791
-
-
Theis, J.F.1
Newlon, C.S.2
-
242
-
-
0026089096
-
Replication factors required for SV40 DNA replication in vitro. I. DNA structure-specific recognition of a primer-template junction by eukaryotic DNA polymerases and their accessory proteins
-
Tsurimoto, T., and Stillman, B. 1991. Replication factors required for SV40 DNA replication in vitro. I. DNA structure-specific recognition of a primer-template junction by eukaryotic DNA polymerases and their accessory proteins. J Biol Chem 266:1950-1960.
-
(1991)
J Biol Chem
, vol.266
, pp. 1950-1960
-
-
Tsurimoto, T.1
Stillman, B.2
-
243
-
-
0032483990
-
The Orc4p and Orc5p subunits of the Xenopus and human origin recognition complex are related to Orc1p and Cdc6p
-
Tugal, T., Zou-Yang, X.H., Gavin, K., Pappin, D., Canas, B., Kobayashi, R., Hunt, T., and Stillman, B. 1998. The Orc4p and Orc5p subunits of the Xenopus and human origin recognition complex are related to Orc1p and Cdc6p. J Biol Chem 273:32421-32429.
-
(1998)
J Biol Chem
, vol.273
, pp. 32421-32429
-
-
Tugal, T.1
Zou-Yang, X.H.2
Gavin, K.3
Pappin, D.4
Canas, B.5
Kobayashi, R.6
Hunt, T.7
Stillman, B.8
-
244
-
-
0026060519
-
Identification of the origin of replication of bovine papillomavirus and characterization of the viral origin recognition factor E1
-
Ustav, M., Ustav, E., Szymanski, P., and Stenlund, A. 1991. Identification of the origin of replication of bovine papillomavirus and characterization of the viral origin recognition factor E1. EMBO J 10:4321-4329.
-
(1991)
EMBO J
, vol.10
, pp. 4321-4329
-
-
Ustav, M.1
Ustav, E.2
Szymanski, P.3
Stenlund, A.4
-
245
-
-
33644822237
-
Structural basis for the cooperative assembly of large T antigen on the origin of replication
-
Valle, M., Chen, X.S., Donate, L.E., Fanning, E., and Carazo, J.M. 2006. Structural basis for the cooperative assembly of large T antigen on the origin of replication. J Mol Biol 357:1295-1305.
-
(2006)
J Mol Biol
, vol.357
, pp. 1295-1305
-
-
Valle, M.1
Chen, X.S.2
Donate, L.E.3
Fanning, E.4
Carazo, J.M.5
-
246
-
-
0033988190
-
Large T-antigen double hexamers imaged at the simian virus 40 origin of replication
-
Valle, M., Gruss, C., Halmer, L., Carazo, J.M., and Donate, L.E. 2000. Large T-antigen double hexamers imaged at the simian virus 40 origin of replication. Mol Cell Biol 20:34-41.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 34-41
-
-
Valle, M.1
Gruss, C.2
Halmer, L.3
Carazo, J.M.4
Donate, L.E.5
-
247
-
-
0035854791
-
Assembly of the human origin recognition complex
-
Vashee, S., Simancek, P., Challberg, M.D., and Kelly, T.J. 2001. Assembly of the human origin recognition complex. J Biol Chem 276:26666-26673.
-
(2001)
J Biol Chem
, vol.276
, pp. 26666-26673
-
-
Vashee, S.1
Simancek, P.2
Challberg, M.D.3
Kelly, T.J.4
-
248
-
-
0001607723
-
Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold
-
Walker, J.E., Saraste, M., Runswick, M.J., and Gay, N.J. 1982. Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO J 1:945-951.
-
(1982)
EMBO J
, vol.1
, pp. 945-951
-
-
Walker, J.E.1
Saraste, M.2
Runswick, M.J.3
Gay, N.J.4
-
249
-
-
0031037467
-
Regulation of replicon size in Xenopus egg extracts
-
Walter, J., and Newport, J.W. 1997. Regulation of replicon size in Xenopus egg extracts. Science 275:993-995.
-
(1997)
Science
, vol.275
, pp. 993-995
-
-
Walter, J.1
Newport, J.W.2
-
250
-
-
7444249512
-
Nucleotide-dependent domain motions within rings of the RecA/AAA(+) superfamily
-
Wang, J. 2004. Nucleotide-dependent domain motions within rings of the RecA/AAA(+) superfamily. J Struct Biol 148:259-267.
-
(2004)
J Struct Biol
, vol.148
, pp. 259-267
-
-
Wang, J.1
-
251
-
-
0032844522
-
The N-terminus promotes oligomerization of the Escherichia coli initiator protein DnaA
-
Weigel, C., Schmidt, A., Seitz, H., Tungler, D., Welzeck, M., and Messer, W. 1999. The N-terminus promotes oligomerization of the Escherichia coli initiator protein DnaA. Mol Microbiol 34: 53-66.
-
(1999)
Mol Microbiol
, vol.34
, pp. 53-66
-
-
Weigel, C.1
Schmidt, A.2
Seitz, H.3
Tungler, D.4
Welzeck, M.5
Messer, W.6
-
252
-
-
0036436076
-
Strand-specific loading of DnaB helicase by DnaA to a substrate mimicking unwound oriC
-
Weigel, C., and Seitz, H. 2002. Strand-specific loading of DnaB helicase by DnaA to a substrate mimicking unwound oriC. Mol Microbiol 46: 1149-1156.
-
(2002)
Mol Microbiol
, vol.46
, pp. 1149-1156
-
-
Weigel, C.1
Seitz, H.2
-
253
-
-
0033582262
-
The Cdc6p nucleotide-binding motif is required for loading mcm proteins onto chromatin
-
Weinreich, M., Liang, C., and Stillman, B. 1999. The Cdc6p nucleotide-binding motif is required for loading mcm proteins onto chromatin. Proc Natl Acad Sci USA 96:441-446.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 441-446
-
-
Weinreich, M.1
Liang, C.2
Stillman, B.3
-
254
-
-
0032978966
-
Two regions of simian virus 40 T antigen determine cooperativity of double-hexamer assembly on the viral origin of DNA replication and promote hexamer interactions during bidirectional origin DNA unwinding
-
Weisshart, K., Taneja, P., Jenne, A., Herbig, U., Simmons, D.T., and Fanning, E. 1999. Two regions of simian virus 40 T antigen determine cooperativity of double-hexamer assembly on the viral origin of DNA replication and promote hexamer interactions during bidirectional origin DNA unwinding. J Virol 73:2201-2211.
-
(1999)
J Virol
, vol.73
, pp. 2201-2211
-
-
Weisshart, K.1
Taneja, P.2
Jenne, A.3
Herbig, U.4
Simmons, D.T.5
Fanning, E.6
-
255
-
-
0026094709
-
A bovine papillomavirus E1-related protein binds specifically to bovine papillomavirus DNA
-
Wilson, V.G., and Ludes-Meyers, J. 1991. A bovine papillomavirus E1-related protein binds specifically to bovine papillomavirus DNA. J Virol 65:5314-5322.
-
(1991)
J Virol
, vol.65
, pp. 5314-5322
-
-
Wilson, V.G.1
Ludes-Meyers, J.2
-
256
-
-
0035988870
-
Papillomavirus E1 proteins: Form, function, and features
-
Wilson, V.G., West, M., Woytek, K., and Rangasamy, D. 2002. Papillomavirus E1 proteins: form, function, and features. Virus Genes 24:275-290.
-
(2002)
Virus Genes
, vol.24
, pp. 275-290
-
-
Wilson, V.G.1
West, M.2
Woytek, K.3
Rangasamy, D.4
-
257
-
-
0030738592
-
The interaction of Ras with GTPase-activating proteins
-
Wittinghofer, A., Scheffzek, K., and Ahmadian, M.R. 1997. The interaction of Ras with GTPase-activating proteins. FEBS Lett 410: 63-67.
-
(1997)
FEBS Lett
, vol.410
, pp. 63-67
-
-
Wittinghofer, A.1
Scheffzek, K.2
Ahmadian, M.R.3
-
258
-
-
0029791749
-
The Escherichia coli Fis protein prevents initiation of DNA replication from oriC in vitro
-
Wold, S., Crooke, E., and Skarstad, K. 1996. The Escherichia coli Fis protein prevents initiation of DNA replication from oriC in vitro. Nucleic Acids Res 24:3527-3532.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 3527-3532
-
-
Wold, S.1
Crooke, E.2
Skarstad, K.3
-
259
-
-
0035861492
-
Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: High-resolution mapping of replication origins
-
Wyrick, J. 2001. Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins. Science 294:2357-2360.
-
(2001)
Science
, vol.294
, pp. 2357-2360
-
-
Wyrick, J.1
-
260
-
-
0038027105
-
Mammalian Mcm2/4/6/7 complex forms a toroidal structure
-
Yabuta, N. 2003. Mammalian Mcm2/4/6/7 complex forms a toroidal structure. Genes Cells 8:413-421.
-
(2003)
Genes Cells
, vol.8
, pp. 413-421
-
-
Yabuta, N.1
-
261
-
-
0027288327
-
The E1 protein of bovine papilloma virus 1 is an ATP-dependent DNA helicase
-
Yang, L., Mohr, I., Fouts, E., Lim, D.A., Nohaile, M., and Botchan, M. 1993. The E1 protein of bovine papilloma virus 1 is an ATP-dependent DNA helicase. Proc Natl Acad Sci USA 90:5086- 5090.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 5086-5090
-
-
Yang, L.1
Mohr, I.2
Fouts, E.3
Lim, D.A.4
Nohaile, M.5
Botchan, M.6
-
262
-
-
0033499708
-
Biochemical analysis of the intrinsic Mcm4-Mcm6-mcm7 DNA helicase activity
-
You, Z. 1999. Biochemical analysis of the intrinsic Mcm4-Mcm6-mcm7 DNA helicase activity. Mole Cell Biol 19:8003-8015.
-
(1999)
Mole Cell Biol
, vol.19
, pp. 8003-8015
-
-
You, Z.1
-
263
-
-
0036668640
-
The Methanobacterium thermoautotrophicum MCM protein can form heptameric rings
-
Yu, X., VanLoock, M.S., Poplawski, A., Kelman, Z., Xiang, T., Tye, B.K., and Egelman, E.H. 2002. The Methanobacterium thermoautotrophicum MCM protein can form heptameric rings. EMBO Rep 3:792-797.
-
(2002)
EMBO Rep
, vol.3
, pp. 792-797
-
-
Yu, X.1
VanLoock, M.S.2
Poplawski, A.3
Kelman, Z.4
Xiang, T.5
Tye, B.K.6
Egelman, E.H.7
-
264
-
-
34250324310
-
Regulation of the initiation of chromosomal replication in bacteria
-
Zakrzewska-Czerwinska, J., Jakimowicz, D., Zawilak-Pawlik, A., and Messer, W. 2007. Regulation of the initiation of chromosomal replication in bacteria. FEMS Microbiol Rev 31:378-387.
-
(2007)
FEMS Microbiol Rev
, vol.31
, pp. 378-387
-
-
Zakrzewska-Czerwinska, J.1
Jakimowicz, D.2
Zawilak-Pawlik, A.3
Messer, W.4
|