-
1
-
-
0000829669
-
-
Knipe D, Howley P (ed.), Fields Virology, Lippincott Williams & Wilkins, Philadelphia, PA
-
Freed EO, Martin MA. In: Knipe D, Howley P (ed.), HIVs and their replication. Fields Virology, Lippincott Williams & Wilkins, Philadelphia, PA, 2001; pp. 1971-2042.
-
(2001)
HIVs and Their Replication
, pp. 1971-2042
-
-
Freed, E.O.1
Martin, M.A.2
-
2
-
-
0002296754
-
-
Coffin JM, Hughes SH, Varmus HE (ed.). Retroviruses, Cold Spring Harbour Laboratory Press, Cold Spring Harbour, NY
-
Telesnitsky A, Goff SP. In: Coffin JM, Hughes SH, Varmus HE (ed.). Reverse transcription and the generation of viral DNA. Retroviruses, Cold Spring Harbour Laboratory Press, Cold Spring Harbour, NY, 1997; pp. 121-160.
-
(1997)
Reverse Transcription and the Generation of Viral DNA
, pp. 121-160
-
-
Telesnitsky, A.1
Goff, S.P.2
-
3
-
-
0001851755
-
-
Papas TS (ed.), Gulf Publishing Company, Houston, TX
-
Schatz O, Cromme FV, Nass T, Lindemann D. In: Papas TS (ed.), Gene Regulation and AIDS: Transcritpional Activation, Retroviruses and Pathogenesis, Gulf Publishing Company, Houston, TX, 1989.
-
(1989)
Gene Regulation and AIDS: Transcritpional Activation, Retroviruses and Pathogenesis
-
-
Schatz, O.1
Cromme, F.V.2
Nass, T.3
Lindemann, D.4
-
4
-
-
0026056935
-
Mutations within the RNase H domain of human immunodeficiency virus type 1 reverse transcriptase abolish virus infectivity
-
Tisdale M, Schulze T, Larder BA, Moelling K. Mutations within the RNase H domain of human immunodeficiency virus type 1 reverse transcriptase abolish virus infectivity. J Gen Virol 1991; 72: 59-66.
-
(1991)
J Gen Virol
, vol.72
, pp. 59-66
-
-
Tisdale, M.1
Schulze, T.2
Larder, B.A.3
Moelling, K.4
-
5
-
-
0036049662
-
HIV-1 integrase and RNase H activities as therapeutic targets
-
Andreola ML, De Soultrait VR, Fournier M, Parissi V, Desjobert C, Litvak S. HIV-1 integrase and RNase H activities as therapeutic targets. Expert Opin Ther Targets 2002; 6: 433-446.
-
(2002)
Expert Opin Ther Targets
, vol.6
, pp. 433-446
-
-
Andreola, M.L.1
De Soultrait, V.R.2
Fournier, M.3
Parissi, V.4
Desjobert, C.5
Litvak, S.6
-
6
-
-
0036822181
-
Uncovering the complexities of retroviral ribonuclease H reveals its potential as a therapeutic target
-
Klarmann GJ, Hawkins ME, Le Grice SFJ. Uncovering the complexities of retroviral ribonuclease H reveals its potential as a therapeutic target. AIDS Rev 2002; 4: 183-194.
-
(2002)
AIDS Rev
, vol.4
, pp. 183-194
-
-
Klarmann, G.J.1
Hawkins, M.E.2
Le Grice, S.F.J.3
-
7
-
-
0036223082
-
Inhibitors of HIV-1 reverse transcriptase and integrase: Classical and emerging therapeutical approaches
-
Tarrago-Litvak L, Andreola ML, Fournier M, Nevinsky A, Parissi V, De Soultrait VR, et al. Inhibitors of HIV-1 reverse transcriptase and integrase: classical and emerging therapeutical approaches. Curr Pharm Des 2002; 8: 595-614.
-
(2002)
Curr Pharm Des
, vol.8
, pp. 595-614
-
-
Tarrago-Litvak, L.1
Andreola, M.L.2
Fournier, M.3
Nevinsky, A.4
Parissi, V.5
De Soultrait, V.R.6
-
8
-
-
0025908083
-
Crystal structure of the ribonuclease H domain of HIV-1 reverse transcriptase
-
Davies JF 2nd, Hostomska Z, Hostomsky Z, Jordan SR, Matthews DA. Crystal structure of the ribonuclease H domain of HIV-1 reverse transcriptase. Science 1991; 252: 88-95.
-
(1991)
Science
, vol.252
, pp. 88-95
-
-
Davies II, J.F.1
Hostomska, Z.2
Hostomsky, Z.3
Jordan, S.R.4
Matthews, D.A.5
-
9
-
-
0027318776
-
Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA
-
Jacobo-Molina A, Ding J, Nanni RG, Clark AD Jr, Lu X, Tantillo C, et al. Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA. Proc Natl Acad Sci USA 1993; 90: 6320-6324.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 6320-6324
-
-
Jacobo-Molina, A.1
Ding, J.2
Nanni, R.G.3
Clark Jr., A.D.4
Lu, X.5
Tantillo, C.6
-
10
-
-
0032573488
-
Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: Implications for drug resistance
-
Huang H, Chopra R, Verdine GL, Harrison SC. Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance. Science 1998; 282: 1669-1675.
-
(1998)
Science
, vol.282
, pp. 1669-1675
-
-
Huang, H.1
Chopra, R.2
Verdine, G.L.3
Harrison, S.C.4
-
11
-
-
0035868713
-
Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA:DNA
-
Sarafianos SG, Das K, Tantillo C, Clark AD Jr, Ding J, Whitcomb JM, et al . Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA:DNA. EMBO J 2001; 20: 1449-1461.
-
(2001)
EMBO J
, vol.20
, pp. 1449-1461
-
-
Sarafianos, S.G.1
Das, K.2
Tantillo, C.3
Clark Jr., A.D.4
Ding, J.5
Whitcomb, J.M.6
-
12
-
-
0037469137
-
Solution structure of the RNase H domain of the HIV-1 reverse transcriptase in the presence of magnesium
-
Pari K, Mueller GA, DeRose EF, Kirby TW, London RE. Solution structure of the RNase H domain of the HIV-1 reverse transcriptase in the presence of magnesium. Biochemistry 2003; 42: 639-650.
-
(2003)
Biochemistry
, vol.42
, pp. 639-650
-
-
Pari, K.1
Mueller, G.A.2
DeRose, E.F.3
Kirby, T.W.4
London, R.E.5
-
13
-
-
0025129937
-
Structure of ribonuclease H phased at 2 A resolution by MAD analysis of the selenomethionyl protein
-
Yang W, Hendrickson WA, Crouch RJ, Satow Y. Structure of ribonuclease H phased at 2 A resolution by MAD analysis of the selenomethionyl protein. Science 1990; 249: 1398-1405.
-
(1990)
Science
, vol.249
, pp. 1398-1405
-
-
Yang, W.1
Hendrickson, W.A.2
Crouch, R.J.3
Satow, Y.4
-
14
-
-
0025162621
-
Three-dimensional structure of ribonuclease H from E. coli
-
Katayanagi K, Miyagawa M, Matsushima M, Ishikawa M, Kanaya S, Ikehara M, et al. Three-dimensional structure of ribonuclease H from E. coli. Nature 1990; 347: 306-309.
-
(1990)
Nature
, vol.347
, pp. 306-309
-
-
Katayanagi, K.1
Miyagawa, M.2
Matsushima, M.3
Ishikawa, M.4
Kanaya, S.5
Ikehara, M.6
-
15
-
-
0028904435
-
Substitution of a highly basic helix/loop sequence into the RNase H domain of human immunodeficiency virus reverse transcriptase restores its Mn(2+)-dependent RNase H activity
-
Keck JL, Marqusee S. Substitution of a highly basic helix/loop sequence into the RNase H domain of human immunodeficiency virus reverse transcriptase restores its Mn(2+)-dependent RNase H activity. Proc Natl Acad Sci USA 1995; 92: 2740-2744.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 2740-2744
-
-
Keck, J.L.1
Marqusee, S.2
-
16
-
-
0029643952
-
Recombining the structures of HIV integrase, RuvC and RNase H
-
Yang W, Steitz TA. Recombining the structures of HIV integrase, RuvC and RNase H. Structure 1995; 3: 131-134.
-
(1995)
Structure
, vol.3
, pp. 131-134
-
-
Yang, W.1
Steitz, T.A.2
-
17
-
-
0025861490
-
Mutations of a conserved residue within HIV-1 ribonuclease H affect its exo- and endonuclease activities
-
Wohrl BM, Volkmann S, Moelling K. Mutations of a conserved residue within HIV-1 ribonuclease H affect its exo- and endonuclease activities. J Mol Biol 1991; 220: 801-818.
-
(1991)
J Mol Biol
, vol.220
, pp. 801-818
-
-
Wohrl, B.M.1
Volkmann, S.2
Moelling, K.3
-
18
-
-
0030964781
-
Substituting a conserved residue of the ribonuclease H domain alters substrate hydrolysis by retroviral reverse transcriptase
-
Rausch JW, Le Grice SF. Substituting a conserved residue of the ribonuclease H domain alters substrate hydrolysis by retroviral reverse transcriptase. J Biol Chem 1997; 272: 8602-8610.
-
(1997)
J Biol Chem
, vol.272
, pp. 8602-8610
-
-
Rausch, J.W.1
Le Grice, S.F.2
-
19
-
-
11144355815
-
Activity of the isolated HIV RNase H domain and specific inhibition by N-hydroxyimides
-
Hang JQ, Rajendran S, Yang Y, Li Y, Wong Kai In P, Overton H, et al. Activity of the isolated HIV RNase H domain and specific inhibition by N-hydroxyimides. Biochem Biophys Res Comm 2004; 317: 321-329.
-
(2004)
Biochem Biophys Res Comm
, vol.317
, pp. 321-329
-
-
Hang, J.Q.1
Rajendran, S.2
Yang, Y.3
Li, Y.4
Wong Kai In, P.5
Overton, H.6
-
20
-
-
0030972151
-
Importance of the C-terminal helix to the stability and enzymatic activity of Escherichia coli ribonuclease H
-
Goedken ER, Raschke TM, Marqusee S. Importance of the C-terminal helix to the stability and enzymatic activity of Escherichia coli ribonuclease H. Biochemistry 1997; 36: 7256-7263.
-
(1997)
Biochemistry
, vol.36
, pp. 7256-7263
-
-
Goedken, E.R.1
Raschke, T.M.2
Marqusee, S.3
-
21
-
-
3242732062
-
Backbone dynamics of the RNase H domain of HIV-1 reverse transcriptase
-
Mueller GA, Pari K, DeRose EF, Kirby TW, London RE. Backbone dynamics of the RNase H domain of HIV-1 reverse transcriptase. Biochemistry 2004; 43: 9332-9342.
-
(2004)
Biochemistry
, vol.43
, pp. 9332-9342
-
-
Mueller, G.A.1
Pari, K.2
DeRose, E.F.3
Kirby, T.W.4
London, R.E.5
-
22
-
-
33646496292
-
Intrinsic activity of the isolated HIV RNase H domain and inhibition by N-hydroxyimides
-
17th International Conference on Antiviral Research (ICAR), Tucson, AZ, May 02-06
-
Hang JQ, Rajendran S, Yang Y, Li Y, Wong Kai In P, Overton H, et al. Intrinsic activity of the isolated HIV RNase H domain and inhibition by N-hydroxyimides. 17th International Conference on Antiviral Research (ICAR), Tucson, AZ, May 02-06. 2004.
-
(2004)
-
-
Hang, J.Q.1
Rajendran, S.2
Yang, Y.3
Li, Y.4
Wong Kai In, P.5
Overton, H.6
-
23
-
-
0023673620
-
Identification and characterization of HIV-specific RNase H by monoclonal antibody
-
Hansen J, Schulze T, Mellert W, Moelling K. Identification and characterization of HIV-specific RNase H by monoclonal antibody. EMBO J 1988; 7: 239-243.
-
(1988)
EMBO J
, vol.7
, pp. 239-243
-
-
Hansen, J.1
Schulze, T.2
Mellert, W.3
Moelling, K.4
-
24
-
-
0025975174
-
Reconstitution in vitro of RNase H activity by using purified N-terminal and C-terminal domains of human immunodeficiency virus type 1 reverse transcriptase
-
Hostomsky Z, Hostomska Z, Hudson GO, Moomaw EW, Nodes BR. Reconstitution in vitro of RNase H activity by using purified N-terminal and C-terminal domains of human immunodeficiency virus type 1 reverse transcriptase. Proc Natl Acad Sci USA 1991; 88: 1148-1152.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 1148-1152
-
-
Hostomsky, Z.1
Hostomska, Z.2
Hudson, G.O.3
Moomaw, E.W.4
Nodes, B.R.5
-
25
-
-
0025718668
-
A recombinant ribonuclease H domain of HIV-1 reverse transcriptase that is enzymatically active
-
Evans DB, Brawn K, Deibel MR Jr, Tarpley WG, Sharma SK. A recombinant ribonuclease H domain of HIV-1 reverse transcriptase that is enzymatically active. J Biol Chem 1991; 266: 20583-20585.
-
(1991)
J Biol Chem
, vol.266
, pp. 20583-20585
-
-
Evans, D.B.1
Brawn, K.2
Deibel Jr., M.R.3
Tarpley, W.G.4
Sharma, S.K.5
-
26
-
-
0025778150
-
Rapid purification and characterisation of HIV-1 reverse transcriptase and RNase H engineered to incorporate a C-terminal tripeptide α-tubulin epitope
-
Stammers DK, Tisdale M, Court S, Parmar V, Bradley C, Ross CK. Rapid purification and characterisation of HIV-1 reverse transcriptase and RNase H engineered to incorporate a C-terminal tripeptide α-tubulin epitope. FEBS Lett 1991; 283: 298-302.
-
(1991)
FEBS Lett
, vol.283
, pp. 298-302
-
-
Stammers, D.K.1
Tisdale, M.2
Court, S.3
Parmar, V.4
Bradley, C.5
Ross, C.K.6
-
27
-
-
0027264116
-
Purification and characterization of an active human immunodeficiency virus type 1 RNase H domain
-
Smith JS, Roth MJ. Purification and characterization of an active human immunodeficiency virus type 1 RNase H domain. J Virol 1993; 67: 4037-4049.
-
(1993)
J Virol
, vol.67
, pp. 4037-4049
-
-
Smith, J.S.1
Roth, M.J.2
-
28
-
-
0027931296
-
Construction of an enzymatically active ribonuclease H domain of human immunodeficiency virus type 1 reverse transcriptase
-
Stahl SJ, Kaufman JD, Vikic-Topic S, Crouch RJ, Wingfield PT. Construction of an enzymatically active ribonuclease H domain of human immunodeficiency virus type 1 reverse transcriptase. Protein Eng 1994; 7: 1103-1108.
-
(1994)
Protein Eng
, vol.7
, pp. 1103-1108
-
-
Stahl, S.J.1
Kaufman, J.D.2
Vikic-Topic, S.3
Crouch, R.J.4
Wingfield, P.T.5
-
29
-
-
0028945841
-
HIV-1 reverse transcriptase-associated RNase H cleaves RNA/RNA in arrested complexes: Implications for the mechanism by which RNase H discriminates between RNA/RNA and RNA/DNA
-
Gotte M, Fackler S, Hermann T, Perola E, Cellai L, Gross HJ, et al. HIV-1 reverse transcriptase-associated RNase H cleaves RNA/RNA in arrested complexes: implications for the mechanism by which RNase H discriminates between RNA/RNA and RNA/DNA. EMBO J 1995; 14: 833-841.
-
(1995)
EMBO J
, vol.14
, pp. 833-841
-
-
Gotte, M.1
Fackler, S.2
Hermann, T.3
Perola, E.4
Cellai, L.5
Gross, H.J.6
-
30
-
-
0001005285
-
Ribonuclease A
-
Raines RT. Ribonuclease A. Chem Rev 1998; 98: 1045-1066.
-
(1998)
Chem Rev
, vol.98
, pp. 1045-1066
-
-
Raines, R.T.1
-
31
-
-
0026447731
-
X-ray structure of the DNase Id(GGTATACC)2 complex at 2.3 A resolution
-
Weston SA, Lahm A, Suck D. X-ray structure of the DNase Id(GGTATACC)2 complex at 2.3 A resolution. J Mol Biol 1992; 226: 1237-1256.
-
(1992)
J Mol Biol
, vol.226
, pp. 1237-1256
-
-
Weston, S.A.1
Lahm, A.2
Suck, D.3
-
32
-
-
0037180394
-
Catalytic mechanisms of restriction and homing endonucleases
-
Galburt EA, Stoddard BL. Catalytic mechanisms of restriction and homing endonucleases. Biochemistry 2002; 41: 13851-13860.
-
(2002)
Biochemistry
, vol.41
, pp. 13851-13860
-
-
Galburt, E.A.1
Stoddard, B.L.2
-
33
-
-
0033981010
-
Understanding the immutability of restriction enzymes: Crystal structure of BglII and its DNA substrate at 1.5 A resolution
-
Lukacs CM, Kucera R, Schildkraut I, Aggarwal AK. Understanding the immutability of restriction enzymes: crystal structure of BglII and its DNA substrate at 1.5 A resolution. Nat Struct Biol 2000; 7: 134-140.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 134-140
-
-
Lukacs, C.M.1
Kucera, R.2
Schildkraut, I.3
Aggarwal, A.K.4
-
34
-
-
0033591238
-
The active site of Serratia endonuclease contains a conserved magnesium-water cluster
-
Miller MD, Cai J, Krause KL. The active site of Serratia endonuclease contains a conserved magnesium-water cluster. J Mol Biol 1999; 288: 975-987.
-
(1999)
J Mol Biol
, vol.288
, pp. 975-987
-
-
Miller, M.D.1
Cai, J.2
Krause, K.L.3
-
35
-
-
0037465825
-
Dispensability of glutamic acid 48 and aspartic acid 134 for Mn2+-dependent activity of Escherichia coli ribonuclease HI
-
Tsunaka Y, Haruki M, Morikawa M, Oobatake M, Kanaya S. Dispensability of glutamic acid 48 and aspartic acid 134 for Mn2+-dependent activity of Escherichia coli ribonuclease HI. Biochemistry 2003; 42: 3366-3374.
-
(2003)
Biochemistry
, vol.42
, pp. 3366-3374
-
-
Tsunaka, Y.1
Haruki, M.2
Morikawa, M.3
Oobatake, M.4
Kanaya, S.5
-
36
-
-
0029967916
-
Proposal for new catalytic roles for two invariant residues in Escherichia coli ribonuclease HI
-
Kashiwagi T, Jeanteur D, Haruki M, Katayanagi K, Kanaya S, Morikawa K. Proposal for new catalytic roles for two invariant residues in Escherichia coli ribonuclease HI. Protein Eng 1996; 9: 857-867.
-
(1996)
Protein Eng
, vol.9
, pp. 857-867
-
-
Kashiwagi, T.1
Jeanteur, D.2
Haruki, M.3
Katayanagi, K.4
Kanaya, S.5
Morikawa, K.6
-
37
-
-
0030460727
-
Thermal stability of Escherichia coli ribonuclease HI and its active site mutants in the presence and absence of the Mg2+ ion. Proposal of a novel catalytic role for Glu48
-
Kanaya S, Oobatake M, Liu Y. Thermal stability of Escherichia coli ribonuclease HI and its active site mutants in the presence and absence of the Mg2+ ion. Proposal of a novel catalytic role for Glu48. J Biol Chem 1996; 271: 32729-32736.
-
(1996)
J Biol Chem
, vol.271
, pp. 32729-32736
-
-
Kanaya, S.1
Oobatake, M.2
Liu, Y.3
-
38
-
-
0034649345
-
Catalysis by Escherichia coli ribonuclease HI is facilitated by a phosphate group of the substrate
-
Haruki M, Tsunaka Y, Morikawa M, Iwai S, Kanaya S. Catalysis by Escherichia coli ribonuclease HI is facilitated by a phosphate group of the substrate. Biochemistry 2000; 39: 13939-13944.
-
(2000)
Biochemistry
, vol.39
, pp. 13939-13944
-
-
Haruki, M.1
Tsunaka, Y.2
Morikawa, M.3
Iwai, S.4
Kanaya, S.5
-
39
-
-
0027377121
-
Crystal structure of Escherichia coli RNase HI in complex with Mg2+ at 2.8 A resolution: Proof for a single Mg(2+)-binding site
-
Katayanagi K, Okumura M, Morikawa K. Crystal structure of Escherichia coli RNase HI in complex with Mg2+ at 2.8 A resolution: proof for a single Mg(2+)-binding site. Proteins 1993; 17: 337-346.
-
(1993)
Proteins
, vol.17
, pp. 337-346
-
-
Katayanagi, K.1
Okumura, M.2
Morikawa, K.3
-
40
-
-
0026225732
-
Binding of metal ions to E. coli RNase HI observed by 1H-15N heteronuclear 2D NMR
-
Oda Y, Nakamura H, Kanaya S, Ikehara M. Binding of metal ions to E. coli RNase HI observed by 1H-15N heteronuclear 2D NMR. J Biomol NMR 1991; 1: 247-255.
-
(1991)
J Biomol NMR
, vol.1
, pp. 247-255
-
-
Oda, Y.1
Nakamura, H.2
Kanaya, S.3
Ikehara, M.4
-
41
-
-
0028153794
-
Metallobiochemistry of the magnesium ion. Characterization of the essential metal-binding site in Escherichia coli ribonuclease H
-
Huang HW, Cowan JA. Metallobiochemistry of the magnesium ion. Characterization of the essential metal-binding site in Escherichia coli ribonuclease H. Eur J Biochem 1994; 219: 253-260.
-
(1994)
Eur J Biochem
, vol.219
, pp. 253-260
-
-
Huang, H.W.1
Cowan, J.A.2
-
42
-
-
0035831544
-
Co-crystal of Escherichia coli RNase HI with Mn2+ ions reveals two divalent metals bound in the active site
-
Goedken ER, Marqusee S. Co-crystal of Escherichia coli RNase HI with Mn2+ ions reveals two divalent metals bound in the active site. J Biol Chem 2001; 276: 7266-7271.
-
(2001)
J Biol Chem
, vol.276
, pp. 7266-7271
-
-
Goedken, E.R.1
Marqusee, S.2
-
43
-
-
0032545251
-
Activation/attenuation model for RNase H. A one-metal mechanism with second-metal inhibition
-
Keck JL, Goedken ER, Marqusee S. Activation/attenuation model for RNase H. A one-metal mechanism with second-metal inhibition. J Biol Chem 1998; 273: 34128-34133.
-
(1998)
J Biol Chem
, vol.273
, pp. 34128-34133
-
-
Keck, J.L.1
Goedken, E.R.2
Marqusee, S.3
-
44
-
-
10744226166
-
Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors
-
Klumpp K, Hang JQ, Rajendran S, Yang Y, Derosier A, Wong Kai In P, et al. Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors. Nucleic Acids Res 2003; 31: 6852-6859.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6852-6859
-
-
Klumpp, K.1
Hang, J.Q.2
Rajendran, S.3
Yang, Y.4
Derosier, A.5
Wong Kai In, P.6
-
45
-
-
0026019625
-
Structural basis for the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I: A two metal ion mechanism
-
Beese LS, Steitz TA. Structural basis for the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I: a two metal ion mechanism. EMBO J 1991; 10: 25-33.
-
(1991)
EMBO J
, vol.10
, pp. 25-33
-
-
Beese, L.S.1
Steitz, T.A.2
-
46
-
-
0032530311
-
Crystal structure of restriction endonuclease BglI bound to its interrupted DNA recognition sequence
-
Newman M, Lunnen K, Wilson G, Greci J, Schildkraut I, Phillips SE. Crystal structure of restriction endonuclease BglI bound to its interrupted DNA recognition sequence. EMBO J 1998; 17: 5466-5476.
-
(1998)
EMBO J
, vol.17
, pp. 5466-5476
-
-
Newman, M.1
Lunnen, K.2
Wilson, G.3
Greci, J.4
Schildkraut, I.5
Phillips, S.E.6
-
47
-
-
0034725527
-
PvuII endonuclease contains two calcium ions in active sites
-
Horton JR, Cheng X. PvuII endonuclease contains two calcium ions in active sites. J Mol Biol 2000; 300: 1049-1056.
-
(2000)
J Mol Biol
, vol.300
, pp. 1049-1056
-
-
Horton, J.R.1
Cheng, X.2
-
48
-
-
13844312491
-
Catalytic mechanism of Escherichia coli ribonuclease III: Kinetic and inhibitor evidence for the involvement of two magnesium ions in RNA phosphodiester hydrolysis
-
Sun W, Pertzev A, Nicholson AW. Catalytic mechanism of Escherichia coli ribonuclease III: kinetic and inhibitor evidence for the involvement of two magnesium ions in RNA phosphodiester hydrolysis. Nucleic Acids Res 2005; 33: 807-815.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 807-815
-
-
Sun, W.1
Pertzev, A.2
Nicholson, A.W.3
-
49
-
-
11844284013
-
Identification of single Mn(2+) binding sites required for activation of the mutant proteins of E. coli RNase HI at Glu48 and/or Asp134 by X-ray crystallography
-
Tsunaka Y, Takano K, Matsumura H, Yamagata Y, Kanaya S. Identification of single Mn(2+) binding sites required for activation of the mutant proteins of E. coli RNase HI at Glu48 and/or Asp134 by X-ray crystallography. J Mol Biol 2005; 345: 1171-1183.
-
(2005)
J Mol Biol
, vol.345
, pp. 1171-1183
-
-
Tsunaka, Y.1
Takano, K.2
Matsumura, H.3
Yamagata, Y.4
Kanaya, S.5
-
50
-
-
0033608967
-
Metal ion catalysis of RNA cleavage by the influenza virus endonuclease
-
Doan L, Handa B, Roberts NA, Klumpp K. Metal ion catalysis of RNA cleavage by the influenza virus endonuclease. Biochemistry 1999; 38: 5612-5619.
-
(1999)
Biochemistry
, vol.38
, pp. 5612-5619
-
-
Doan, L.1
Handa, B.2
Roberts, N.A.3
Klumpp, K.4
-
52
-
-
0031004765
-
Observations on catalysis by hammerhead ribozymes are consistent with a two-divalent-metalion mechanism
-
Pontius BW, Lott WB, von Hippel PH. Observations on catalysis by hammerhead ribozymes are consistent with a two-divalent-metalion mechanism. Proc Natl Acad Sci USA 1997; 94: 2290-2294.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 2290-2294
-
-
Pontius, B.W.1
Lott, W.B.2
von Hippel, P.H.3
-
53
-
-
0031882388
-
A two-metal ion mechanism operates in the hammerhead ribozyme-mediated cleavage of an RNA substrate
-
Lott WB, Pontius BW, von Hippel PH. A two-metal ion mechanism operates in the hammerhead ribozyme-mediated cleavage of an RNA substrate. Proc Natl Acad Sci USA 1998; 95: 542-547.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 542-547
-
-
Lott, W.B.1
Pontius, B.W.2
von Hippel, P.H.3
-
54
-
-
0034002794
-
Metal-ion stoichiometry of the HIV-1 RT ribonuclease H domain: Evidence for two mutually exclusive sites leads to new mechanistic insights on metal-mediated hydrolysis in nucleic acid biochemistry
-
Cowan JA, Ohyama T, Howard K, Rausch JW, Cowan SM, Le Grice SF. Metal-ion stoichiometry of the HIV-1 RT ribonuclease H domain: evidence for two mutually exclusive sites leads to new mechanistic insights on metal-mediated hydrolysis in nucleic acid biochemistry. J Biol Inorg Chem 2000; 5: 67-74.
-
(2000)
J Biol Inorg Chem
, vol.5
, pp. 67-74
-
-
Cowan, J.A.1
Ohyama, T.2
Howard, K.3
Rausch, J.W.4
Cowan, S.M.5
Le Grice, S.F.6
-
55
-
-
0036713572
-
Mutations in the ribonuclease H active site of HIV-RT reveal a role for this site in stabilizing enzyme-primer-template binding
-
Cristofaro JV, Rausch JW, Le Grice SF, DeStefano JJ. Mutations in the ribonuclease H active site of HIV-RT reveal a role for this site in stabilizing enzyme-primer-template binding. Biochemistry 2002; 41: 10968-10975.
-
(2002)
Biochemistry
, vol.41
, pp. 10968-10975
-
-
Cristofaro, J.V.1
Rausch, J.W.2
Le Grice, S.F.3
DeStefano, J.J.4
-
56
-
-
0344453794
-
Use of a pharmacophore model to discover a new class of influenza endonuclease inhibitors
-
Parkes KE, Ermert P, Fassler J, Ives J, Martin JA, Merrett JH, et al. Use of a pharmacophore model to discover a new class of influenza endonuclease inhibitors. J Med Chem 2003; 46: 1153-1164.
-
(2003)
J Med Chem
, vol.46
, pp. 1153-1164
-
-
Parkes, K.E.1
Ermert, P.2
Fassler, J.3
Ives, J.4
Martin, J.A.5
Merrett, J.H.6
-
57
-
-
0028171260
-
Inhibition of cap (m7GpppXm)-dependent endonuclease of influenza virus by 4-substituted 2, 4-dioxobutanoic acid compounds
-
Tomassini J, Selnick H, Davies ME, Armstrong ME, Baldwin J, Bourgeois M, et al. Inhibition of cap (m7GpppXm)-dependent endonuclease of influenza virus by 4-substituted 2, 4-dioxobutanoic acid compounds. Antimicrob Agents Chemother 1994; 38: 2827-2837.
-
(1994)
Antimicrob Agents Chemother
, vol.38
, pp. 2827-2837
-
-
Tomassini, J.1
Selnick, H.2
Davies, M.E.3
Armstrong, M.E.4
Baldwin, J.5
Bourgeois, M.6
-
58
-
-
0037474193
-
Inhibition of HIV-1 ribonuclease H by a novel diketo acid, 4-[5-(benzoylamino)thien-2-yl]-2, 4-dioxobutanoic acid
-
Shaw-Reid CA, Munshi V, Graham P, Wolfe A, Witmer M, Danzeisen R, et al. Inhibition of HIV-1 ribonuclease H by a novel diketo acid, 4-[5-(benzoylamino)thien-2-yl]-2, 4-dioxobutanoic acid. J Biol Chem 2003; 278: 2777-2780.
-
(2003)
J Biol Chem
, vol.278
, pp. 2777-2780
-
-
Shaw-Reid, C.A.1
Munshi, V.2
Graham, P.3
Wolfe, A.4
Witmer, M.5
Danzeisen, R.6
-
59
-
-
0034723439
-
Inhibitors of strand transfer that prevent integration and inhibit HIV-1 replication in cells
-
Hazuda DJ, Felock P, Witmer M, Wolfe A, Stillmock K, Grobler JA, et al. Inhibitors of strand transfer that prevent integration and inhibit HIV-1 replication in cells. Science 2000; 287: 646-650
-
(2000)
Science
, vol.287
, pp. 646-650
-
-
Hazuda, D.J.1
Felock, P.2
Witmer, M.3
Wolfe, A.4
Stillmock, K.5
Grobler, J.A.6
-
60
-
-
0347361643
-
Discovery of alpha, gamma-diketo acids as potent selective and reversible inhibitors of hepatitis C virus NS5b RNA-dependent RNA polymerase
-
Summa V, Petrocchi A, Pace P, Matassa VG, De Francesco R, Altamura S, et al . Discovery of alpha, gamma-diketo acids as potent selective and reversible inhibitors of hepatitis C virus NS5b RNA-dependent RNA polymerase. J Med Chem 2004; 47: 14-17.
-
(2004)
J Med Chem
, vol.47
, pp. 14-17
-
-
Summa, V.1
Petrocchi, A.2
Pace, P.3
Matassa, V.G.4
De Francesco, R.5
Altamura, S.6
-
61
-
-
13444257639
-
Dissecting the Effects of DNA Polymerase and Ribonuclease H Inhibitor Combinations on HIV-1 Reverse-Transcriptase Activities
-
Shaw-Reid CA, Feuston B, Munshi V, Getty K, Krueger J, Hazuda DJ, et al. Dissecting the Effects of DNA Polymerase and Ribonuclease H Inhibitor Combinations on HIV-1 Reverse-Transcriptase Activities. Biochemistry 2005; 44: 1595-1606.
-
(2005)
Biochemistry
, vol.44
, pp. 1595-1606
-
-
Shaw-Reid, C.A.1
Feuston, B.2
Munshi, V.3
Getty, K.4
Krueger, J.5
Hazuda, D.J.6
-
62
-
-
13544276913
-
6-[1-(4-Fluorophenyl)methyl-1H-pyrrol-2-yl)]-2, 4-dioxo-5-hexenoic acid ethyl ester a novel diketo acid derivative which selectively inhibits the HIV-1 viral replication in cell culture and the ribonuclease H activity in vitro
-
Tramontano E, Esposito F, Badas R, Di Santo R, Costi R, La Colla P. 6-[1-(4-Fluorophenyl)methyl-1H-pyrrol-2-yl)]-2, 4-dioxo-5-hexenoic acid ethyl ester a novel diketo acid derivative which selectively inhibits the HIV-1 viral replication in cell culture and the ribonuclease H activity in vitro. Antiviral Res 2005; 65: 117-124.
-
(2005)
Antiviral Res
, vol.65
, pp. 117-124
-
-
Tramontano, E.1
Esposito, F.2
Badas, R.3
Di Santo, R.4
Costi, R.5
La Colla, P.6
-
64
-
-
0024999408
-
Illimaquinone, a selective inhibitor of the RNase H activity of human immunodeficiency virus type 1 reverse transcriptase
-
Loya S, Tal R, Kashman Y, Hizi A. Illimaquinone, a selective inhibitor of the RNase H activity of human immunodeficiency virus type 1 reverse transcriptase. Antimicrob Agents Chemother 1990; 34: 2009-2012.
-
(1990)
Antimicrob Agents Chemother
, vol.34
, pp. 2009-2012
-
-
Loya, S.1
Tal, R.2
Kashman, Y.3
Hizi, A.4
-
65
-
-
0036221012
-
Inhibitory effects of quinones on RNase H activity associated with HIV-1 reverse transcriptase
-
Min BS, Miyashiro H, Hattori M. Inhibitory effects of quinones on RNase H activity associated with HIV-1 reverse transcriptase. Phytother Res 2002; 16: S57-S62.
-
(2002)
Phytother Res
, vol.16
-
-
Min, B.S.1
Miyashiro, H.2
Hattori, M.3
-
66
-
-
0025041016
-
The inhibition of human immunodeficiency virus type 1 reverse transcriptase by avarol and avarone derivatives
-
Loya S, Hizi A. The inhibition of human immunodeficiency virus type 1 reverse transcriptase by avarol and avarone derivatives. FEBS Lett 1990; 269: 131-134.
-
(1990)
FEBS Lett
, vol.269
, pp. 131-134
-
-
Loya, S.1
Hizi, A.2
-
67
-
-
0027322533
-
The interaction of illimaquinone, a selective inhibitor of the RNase H activity, with the reverse transcriptases of human immunodeficiency and murine leukemia retroviruses
-
Loya S, Hizi A. The interaction of illimaquinone, a selective inhibitor of the RNase H activity, with the reverse transcriptases of human immunodeficiency and murine leukemia retroviruses. J Biol Chem 1993; 268: 9323-9328.
-
(1993)
J Biol Chem
, vol.268
, pp. 9323-9328
-
-
Loya, S.1
Hizi, A.2
-
68
-
-
0025812772
-
Inhibition of the RNase H activity of HIV reverse transcriptase by azidothymidylate
-
Tan CK, Civil R, Mian AM, So AG, Downey KM. Inhibition of the RNase H activity of HIV reverse transcriptase by azidothymidylate. Biochemistry 1991; 30: 4831-4835.
-
(1991)
Biochemistry
, vol.30
, pp. 4831-4835
-
-
Tan, C.K.1
Civil, R.2
Mian, A.M.3
So, A.G.4
Downey, K.M.5
-
69
-
-
0028344281
-
Catalytically distinct conformations of the ribonuclease H of HIV-1 reverse transcriptase by substrate cleavage patterns and inhibition by azidothymidylate and N-ethylmaleimide
-
Zhan X, Tan CK, Scott WA, Mian AM, Downey KM, So AG. Catalytically distinct conformations of the ribonuclease H of HIV-1 reverse transcriptase by substrate cleavage patterns and inhibition by azidothymidylate and N-ethylmaleimide. Biochemistry 1994; 33: 1366-1372.
-
(1994)
Biochemistry
, vol.33
, pp. 1366-1372
-
-
Zhan, X.1
Tan, C.K.2
Scott, W.A.3
Mian, A.M.4
Downey, K.M.5
So, A.G.6
-
70
-
-
0030061628
-
Inhibition of HIV-1 Rnase H activity by nucleotide dimers and monomers
-
Allen SJW, Krawczyk SH, McGee LR, Bischofberger N, Mulato AS, Cherrington JM. Inhibition of HIV-1 Rnase H activity by nucleotide dimers and monomers. Antivir Chem Chemother 1996; 7: 37-45.
-
(1996)
Antivir Chem Chemother
, vol.7
, pp. 37-45
-
-
Allen, S.J.W.1
Krawczyk, S.H.2
McGee, L.R.3
Bischofberger, N.4
Mulato, A.S.5
Cherrington, J.M.6
-
71
-
-
33646527510
-
New dinucleotide derivatives are RNase H inhibitors - Useful for the treatment of HIV and HBV infections
-
Matthes E, von Jant-Lipinski M. New dinucleotide derivatives are RNase H inhibitors - useful for the treatment of HIV and HBV infections. German Patent DE19640054A 1998.
-
(1998)
German Patent DE19640054A
-
-
Matthes, E.1
von Jant-Lipinski, M.2
-
72
-
-
0031000566
-
Inhibition of the ribonuclease H and DNA polymerase activities of HIV-1 reverse transcriptase by N-(4-tertbutylbenzoyl)-2-hydroxy-1-naphthaldehyde hydrazone
-
Borkow G, Fletcher RS, Barnard J, Arion D, Motakis D, Dmitrienko GI, et al. Inhibition of the ribonuclease H and DNA polymerase activities of HIV-1 reverse transcriptase by N-(4-tertbutylbenzoyl)-2-hydroxy-1-naphthaldehyde hydrazone. Biochemistry 1997; 36: 3179-3185.
-
(1997)
Biochemistry
, vol.36
, pp. 3179-3185
-
-
Borkow, G.1
Fletcher, R.S.2
Barnard, J.3
Arion, D.4
Motakis, D.5
Dmitrienko, G.I.6
-
73
-
-
0037059743
-
Mutational analysis of Tyr-501 of HIV-1 reverse transcriptase. Effects on ribonuclease H activity and inhibition of this activity by N-acylhydrazones
-
Arion D, Sluis-Cremer N, Min KL, Abram ME, Fletcher RS, Parniak MA. Mutational analysis of Tyr-501 of HIV-1 reverse transcriptase. Effects on ribonuclease H activity and inhibition of this activity by N-acylhydrazones. J Biol Chem 2002; 277: 1370-1374.
-
(2002)
J Biol Chem
, vol.277
, pp. 1370-1374
-
-
Arion, D.1
Sluis-Cremer, N.2
Min, K.L.3
Abram, M.E.4
Fletcher, R.S.5
Parniak, M.A.6
-
74
-
-
0036076157
-
Destabilization of the HIV-1 reverse transcriptase dimer upon interaction with N-acyl hydrazone inhibitors
-
Sluis-Cremer N, Arion D, Parniak MA. Destabilization of the HIV-1 reverse transcriptase dimer upon interaction with N-acyl hydrazone inhibitors. Mol Pharmacol 2002; 62: 398-405.
-
(2002)
Mol Pharmacol
, vol.62
, pp. 398-405
-
-
Sluis-Cremer, N.1
Arion, D.2
Parniak, M.A.3
-
75
-
-
33646536280
-
RNase H: Can selective inhibitors be identified?
-
12th Conference on Retroviruses and Opportunistic Infections (CROI) Abstract 114
-
Parniak MA. RNase H: Can selective inhibitors be identified? 12th Conference on Retroviruses and Opportunistic Infections (CROI) 2005; Abstract 114.
-
(2005)
-
-
Parniak, M.A.1
-
76
-
-
33646501138
-
Crystal structure of a complex of HIV-1 reverse transcriptase with an RNase H inhibitor bound at a novel site on the enzyme
-
12th Conference on Retroviruses and Opportunistic Infections (CROI) Abstract 157
-
Himmel DM, Sarafianos SG, Clark AD Jr, Parniak MA, Hughes SH, Arnold E. Crystal structure of a complex of HIV-1 reverse transcriptase with an RNase H inhibitor bound at a novel site on the enzyme. 12th Conference on Retroviruses and Opportunistic Infections (CROI) 2005; Abstract 157.
-
(2005)
-
-
Himmel, D.M.1
Sarafianos, S.G.2
Clark Jr., A.D.3
Parniak, M.A.4
Hughes, S.H.5
Arnold, E.6
-
77
-
-
0032847978
-
Inhibitors of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase
-
Gabbara S, Davis WR, Hupe L, Hupe D, Peliska JA. Inhibitors of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase. Biochemistry 1999; 38: 13070-13076.
-
(1999)
Biochemistry
, vol.38
, pp. 13070-13076
-
-
Gabbara, S.1
Davis, W.R.2
Hupe, L.3
Hupe, D.4
Peliska, J.A.5
-
78
-
-
0141758137
-
A fluorescence-based high-throughput screening assay for inhibitors of human immunodeficiency virus-1 reverse transcriptase-associated ribonuclease H activity
-
Parniak MA, Min KL, Budihas SR, Le Grice SF, Beutler JA. A fluorescence-based high-throughput screening assay for inhibitors of human immunodeficiency virus-1 reverse transcriptase-associated ribonuclease H activity. Anal Biochem 2003; 322: 33-39.
-
(2003)
Anal Biochem
, vol.322
, pp. 33-39
-
-
Parniak, M.A.1
Min, K.L.2
Budihas, S.R.3
Le Grice, S.F.4
Beutler, J.A.5
-
79
-
-
20044387576
-
Selective inhibition of HIV-1 reverse transcriptase-associated ribonuclease H activity by hydroxylated tropolones
-
Budihas SR, Gorshkova I, Gaidamakov S, Wamiru A, Bona MK, Parniak MA, et al. Selective inhibition of HIV-1 reverse transcriptase-associated ribonuclease H activity by hydroxylated tropolones. Nucleic Acids Res 2005; 33: 1249-1256.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 1249-1256
-
-
Budihas, S.R.1
Gorshkova, I.2
Gaidamakov, S.3
Wamiru, A.4
Bona, M.K.5
Parniak, M.A.6
-
80
-
-
33646501137
-
Mappicine analogs, intermediates in the synthesis of mappicine analogs and methods of synthesis of mappicine analogs
-
United States Patent Application Publication US2004/0077674 A1
-
Curran DP, Parniak MA, Gabarda A, Zhang W, Luo Z, Chen CHT. Mappicine analogs, intermediates in the synthesis of mappicine analogs and methods of synthesis of mappicine analogs. United States Patent Application Publication US2004/0077674 A1 2004.
-
(2004)
-
-
Curran, D.P.1
Parniak, M.A.2
Gabarda, A.3
Zhang, W.4
Luo, Z.5
Chen, C.H.T.6
-
81
-
-
20844459881
-
Antiretroviral effect of L-00870810, a novel HIV-1 integrase inhibitor in HIV-1 infected patients
-
12th Conference on Retroviruses and Opportunistic Infections (CROI) Abstract 161
-
Little S, Drusano G, Schooley RT, Haas D, Kumar P, Hammer SM, et al. Antiretroviral effect of L-00870810, a novel HIV-1 integrase inhibitor in HIV-1 infected patients. 12th Conference on Retroviruses and Opportunistic Infections (CROI) 2005; Abstract 161.
-
(2005)
-
-
Little, S.1
Drusano, G.2
Schooley, R.T.3
Haas, D.4
Kumar, P.5
Hammer, S.M.6
-
82
-
-
0028584269
-
Crystal structure of the catalytic domain of HIV-1 integrase: Similarity to other polynucleotidyl transferases
-
Dyda F, Hickman AB, Jenkins TM, Engelman A, Craigie R, Davies DR. Crystal structure of the catalytic domain of HIV-1 integrase: similarity to other polynucleotidyl transferases. Science 1994; 266: 1981-1986.
-
(1994)
Science
, vol.266
, pp. 1981-1986
-
-
Dyda, F.1
Hickman, A.B.2
Jenkins, T.M.3
Engelman, A.4
Craigie, R.5
Davies, D.R.6
-
83
-
-
0001431264
-
Binuclear Metallohydrolases
-
Wilcox DE. Binuclear Metallohydrolases. Chem Rev 1996; 96: 2435-2458.
-
(1996)
Chem Rev
, vol.96
, pp. 2435-2458
-
-
Wilcox, D.E.1
-
84
-
-
6944235757
-
Closely related antiretroviral agents as inhibitors of two HIV-1 enzymes, ribonuclease H and integrase: "Killing two birds with one stone"
-
Andreola ML. Closely related antiretroviral agents as inhibitors of two HIV-1 enzymes, ribonuclease H and integrase: "killing two birds with one stone". Curr Pharm Des 2004; 10(30): 3713-23.
-
(2004)
Curr Pharm Des
, vol.10
, Issue.30
, pp. 3713-3723
-
-
Andreola, M.L.1
-
85
-
-
18744416007
-
Highly active antiretroviral therapy: Current state of the art, new agents and their pharmacological interactions useful for improving therapeutic outcome
-
Barbaro G, Scozzafava A, Mastrolorenzo A, Supuran CT. Highly active antiretroviral therapy: current state of the art, new agents and their pharmacological interactions useful for improving therapeutic outcome. Curr Pharm Des 2005; 11(14): 1805-43.
-
(2005)
Curr Pharm Des
, vol.11
, Issue.14
, pp. 1805-1843
-
-
Barbaro, G.1
Scozzafava, A.2
Mastrolorenzo, A.3
Supuran, C.T.4
-
86
-
-
24944465765
-
RNA interference-based gene silencing in mice: The development of a novel therapeutical strategy
-
Spankuch B, Strebhardt K. RNA interference-based gene silencing in mice: the development of a novel therapeutical strategy. Curr Pharm Des 2005; 11(26): 3405-19.
-
(2005)
Curr Pharm Des
, vol.11
, Issue.26
, pp. 3405-3419
-
-
Spankuch, B.1
Strebhardt, K.2
|