-
1
-
-
0018130921
-
Formation of mutagens in beef and beef extract during cooking
-
Commoner, B., Vithayathil, A. J., Dolara, P., Nair, S., Madyastha, P., and Cuca, G. C. (1978) Formation of mutagens in beef and beef extract during cooking. Science 201, 913-916.
-
(1978)
Science
, vol.201
, pp. 913-916
-
-
Commoner, B.1
Vithayathil, A.J.2
Dolara, P.3
Nair, S.4
Madyastha, P.5
Cuca, G.C.6
-
2
-
-
0025758143
-
Occurrence, identification, and bacterial mutagenicity of heterocyclic amines in cooked food
-
Felton, J. S., and Knize, M. G. (1991) Occurrence, identification, and bacterial mutagenicity of heterocyclic amines in cooked food. Mutat. Res. 259, 205-217.
-
(1991)
Mutat. Res.
, vol.259
, pp. 205-217
-
-
Felton, J.S.1
Knize, M.G.2
-
3
-
-
0020050254
-
Mutagens, carcinogens, and tumor promoters in our daily food
-
Sugimura, T. (1982) Mutagens, carcinogens, and tumor promoters in our daily food. Cancer 49, 1970-1984.
-
(1982)
Cancer
, vol.49
, pp. 1970-1984
-
-
Sugimura, T.1
-
4
-
-
0026583809
-
Food-derived mutagens and carcinogens
-
Wakabayashi, K., Nagao, M., Esumi, H., and Sugimura, T. (1992) Food-derived mutagens and carcinogens. Cancer Res. 52, 2092s-2098s.
-
(1992)
Cancer Res.
, vol.52
-
-
Wakabayashi, K.1
Nagao, M.2
Esumi, H.3
Sugimura, T.4
-
5
-
-
8944241771
-
Heterocyclic amines: Evaluation of their role in diet associated human cancer
-
Gooderham, N. J., Murray, S., Lynch, A. M., Edwards, R. J., Yadollahi-Farsani, M., Bratt, C., Rich, K. J., Zhao, K., Murray, B. P., Bhadresa, S., Crosbie, S. J., Boobis, A. R., and Davies, D. S. (1996) Heterocyclic amines: Evaluation of their role in diet associated human cancer. Br. J. Clin. Pharmacol. 42, 91-98.
-
(1996)
Br. J. Clin. Pharmacol.
, vol.42
, pp. 91-98
-
-
Gooderham, N.J.1
Murray, S.2
Lynch, A.M.3
Edwards, R.J.4
Yadollahi-Farsani, M.5
Bratt, C.6
Rich, K.J.7
Zhao, K.8
Murray, B.P.9
Bhadresa, S.10
Crosbie, S.J.11
Boobis, A.R.12
Davies, D.S.13
-
6
-
-
0034674913
-
2-Amino-1-methyl-6-phenylimidazo-[4,5-b]pyridine, a carcinogen in high-temperature-cooked meat, and breast cancer risk
-
Sinha, R., Gustafson, D. R., Kulldorff, M., Wen, W. Q., Cerhan, J. R., and Zheng, W. (2000) 2-Amino-1-methyl-6-phenylimidazo-[4,5-b]pyridine, a carcinogen in high-temperature-cooked meat, and breast cancer risk. J. Natl. Cancer Inst. 92, 1352-1354.
-
(2000)
J. Natl. Cancer Inst.
, vol.92
, pp. 1352-1354
-
-
Sinha, R.1
Gustafson, D.R.2
Kulldorff, M.3
Wen, W.Q.4
Cerhan, J.R.5
Zheng, W.6
-
7
-
-
0032543359
-
The role of DNA adducts in chemical carcinogenesis
-
Garner, R. C. (1998) The role of DNA adducts in chemical carcinogenesis. Mutat. Res. 402, 67-75.
-
(1998)
Mutat. Res.
, vol.402
, pp. 67-75
-
-
Garner, R.C.1
-
8
-
-
1242328728
-
Formation and analysis of heterocyclic aromatic amine-DNA adducts in vitro and in vivo
-
Turesky, R. J., and Vouros, P. (2004) Formation and analysis of heterocyclic aromatic amine-DNA adducts in vitro and in vivo. J. Chromatogr. B 802, 155-166.
-
(2004)
J. Chromatogr. B
, vol.802
, pp. 155-166
-
-
Turesky, R.J.1
Vouros, P.2
-
9
-
-
0033034183
-
DNA adducts of heterocyclic amine food mutagens: Implications for mutagenesis and carcinogenesis
-
Schut, H. A., and Snyderwine, E. G. (1999) DNA adducts of heterocyclic amine food mutagens: Implications for mutagenesis and carcinogenesis. Carcinogenesis 20, 353-368.
-
(1999)
Carcinogenesis
, vol.20
, pp. 353-368
-
-
Schut, H.A.1
Snyderwine, E.G.2
-
10
-
-
0036041273
-
Heterocyclic aromatic amine metabolism, DNA adduct formation, mutagenesis, and carcinogenesis
-
Turesky, R. J. (2002) Heterocyclic aromatic amine metabolism, DNA adduct formation, mutagenesis, and carcinogenesis. Drug Metab. Rev. 34, 625-650.
-
(2002)
Drug Metab. Rev.
, vol.34
, pp. 625-650
-
-
Turesky, R.J.1
-
11
-
-
0030240944
-
How cancer arises
-
Weinberg, R. A. (1996) How cancer arises. Sci. Am. 275, 62-70.
-
(1996)
Sci. Am.
, vol.275
, pp. 62-70
-
-
Weinberg, R.A.1
-
12
-
-
3543129379
-
Chemical-induced DNA damage and human cancer risk
-
Poirier, M. C. (2004) Chemical-induced DNA damage and human cancer risk. Nat. Rev. Cancer 4, 630-637.
-
(2004)
Nat. Rev. Cancer
, vol.4
, pp. 630-637
-
-
Poirier, M.C.1
-
13
-
-
13444273224
-
Nature and nurture - Lessons from chemical carcinogenesis
-
Luch, A. (2005) Nature and nurture-Lessons from chemical carcinogenesis. Nat. Rev. Cancer 5, 113-125.
-
(2005)
Nat. Rev. Cancer
, vol.5
, pp. 113-125
-
-
Luch, A.1
-
14
-
-
0025768966
-
A new colon and mammary carcinogen in cooked food, 2-amino-1-methyl-6- phenylimidazo[4,5-6]pyridine (PhIP)
-
Ito, N., Hasegawa, R., Sano, M., Tamano, S., Esumi, H., Takayama, S., and Sugimura, T. (1991) A new colon and mammary carcinogen in cooked food, 2-amino-1-methyl-6-phenylimidazo[4,5-6]pyridine (PhIP). Carcinogenesis 12, 1503-1506.
-
(1991)
Carcinogenesis
, vol.12
, pp. 1503-1506
-
-
Ito, N.1
Hasegawa, R.2
Sano, M.3
Tamano, S.4
Esumi, H.5
Takayama, S.6
Sugimura, T.7
-
15
-
-
14444288520
-
The prostate: A target for carcinogenicity of 2-amino-1-methyl-6- phenylimidazo-[4,5-6]pyridine (PhIP) derived from cooked foods
-
Shirai, T., Sano, M., Tamano, S., Takahashi, S., Hirose, M., Futakuchi, M., Hasegawa, R., Imaida, K., Matsumoto, K., Wakabayashi, K., Sugimura, T., and Ito, N. (1997) The prostate: a target for carcinogenicity of 2-amino-1-methyl-6-phenylimidazo-[4,5-6]pyridine (PhIP) derived from cooked foods. Cancer Res. 57, 195-198.
-
(1997)
Cancer Res.
, vol.57
, pp. 195-198
-
-
Shirai, T.1
Sano, M.2
Tamano, S.3
Takahashi, S.4
Hirose, M.5
Futakuchi, M.6
Hasegawa, R.7
Imaida, K.8
Matsumoto, K.9
Wakabayashi, K.10
Sugimura, T.11
Ito, N.12
-
16
-
-
0029682493
-
Inhibition of 2-Amino-1-methyl-6-phenyl-imidazo[4,5]pyridine-induced lymphoma formation by oltipraz
-
Rao, C. V., Rivenson, A., Zang, E., Steele, V., Kelloff, G., and Reddy, B. S. (1996) Inhibition of 2-Amino-1-methyl-6-phenyl-imidazo[4,5]pyridine- induced lymphoma formation by oltipraz. Cancer Res. 56, 3395-3398.
-
(1996)
Cancer Res.
, vol.56
, pp. 3395-3398
-
-
Rao, C.V.1
Rivenson, A.2
Zang, E.3
Steele, V.4
Kelloff, G.5
Reddy, B.S.6
-
17
-
-
0028069430
-
CYP1A2-catalyzed conversion of dietary heterocyclic amines to their proximate carcinogens is their major route of metabolism in humans
-
Boobis, A. R., Lynch, A. M., Murray, S., de la Torre, R., Solans, A., Farre, M., Segura, J., Gooderham, N. J., and Davies, D. S. (1994) CYP1A2-catalyzed conversion of dietary heterocyclic amines to their proximate carcinogens is their major route of metabolism in humans. Cancer Res. 54, 89-94.
-
(1994)
Cancer Res.
, vol.54
, pp. 89-94
-
-
Boobis, A.R.1
Lynch, A.M.2
Murray, S.3
De La Torre, R.4
Solans, A.5
Farre, M.6
Segura, J.7
Gooderham, N.J.8
Davies, D.S.9
-
18
-
-
0029421694
-
Metabolic activation and DNA adduct detection of PhIP in dogs, rats, and humans in relation to urinary bladder and colon carcinogenesis
-
Kadlubar, F., Kaderlik, R. K., Mulder, G. J., Lin, D., Butler, M. A., Teitel, C. H., Minchin, R. F., Ilett, K. F., Friesen, M. D., Bartsch, H., and et al. (1995) Metabolic activation and DNA adduct detection of PhIP in dogs, rats, and humans in relation to urinary bladder and colon carcinogenesis. Princess Takamatsu Symp. 23, 207-213.
-
(1995)
Princess Takamatsu Symp.
, vol.23
, pp. 207-213
-
-
Kadlubar, F.1
Kaderlik, R.K.2
Mulder, G.J.3
Lin, D.4
Butler, M.A.5
Teitel, C.H.6
Minchin, R.F.7
Ilett, K.F.8
Friesen, M.D.9
Bartsch, H.10
-
19
-
-
0025013470
-
Role of sulfation and acetylation in the activation of 2-hydroxyamino-1-methyl-6-phenylimidazo[4,5-6]pyridine to intermediates which bind DNA
-
Buonarati, M. H., Turteltaub, K. W., Shen, N. H., and Felton, J. S. (1990) Role of sulfation and acetylation in the activation of 2-hydroxyamino-1-methyl-6-phenylimidazo[4,5-6]pyridine to intermediates which bind DNA. Mutat. Res. 245, 185-190.
-
(1990)
Mutat. Res.
, vol.245
, pp. 185-190
-
-
Buonarati, M.H.1
Turteltaub, K.W.2
Shen, N.H.3
Felton, J.S.4
-
20
-
-
0026612317
-
Reaction of the N2-acetoxy derivative of 2-amino-1-methyl-6- phenylimidazo[4,5-b]pyridine (PhIP) with 2′-deoxyguanosine and DNA. Synthesis and identification of N2-(2′-deoxyguanosin-8-yl)-PhIP
-
Frandsen, H., Grivas, S., Andersson, R., Dragsted, L., and Larsen, J. C. (1992) Reaction of the N2-acetoxy derivative of 2-amino-1-methyl-6- phenylimidazo[4,5-b]pyridine (PhIP) with 2′-deoxyguanosine and DNA. Synthesis and identification of N2-(2′-deoxyguanosin-8-yl)-PhIP. Carcinogenesis 13, 629-635.
-
(1992)
Carcinogenesis
, vol.13
, pp. 629-635
-
-
Frandsen, H.1
Grivas, S.2
Andersson, R.3
Dragsted, L.4
Larsen, J.C.5
-
21
-
-
0026783540
-
Identification of N-(Deoxyguanosin-8-yl) -2-amino-l-methyl-6- phenylimidazo[4,5-6]pyridine as the major adduct formed by the food-borne carcinogen, 2-amino-1-methyl-6-phenylimidazo [4,5-b] pyridine, with DNA
-
Lin, D., Kaderlik, K. R., Turesky, R. J., Miller, D. W., Lay, J. O., Jr., and Kadlubar, F. F. (1992) Identification of N-(Deoxyguanosin-8-yl) -2-amino-l-methyl-6-phenylimidazo[4,5-6]pyridine as the major adduct formed by the food-borne carcinogen, 2-amino-1-methyl-6-phenylimidazo [4,5-b] pyridine, with DNA. Chem. Res. Toxicol. 5, 691-697.
-
(1992)
Chem. Res. Toxicol.
, vol.5
, pp. 691-697
-
-
Lin, D.1
Kaderlik, K.R.2
Turesky, R.J.3
Miller, D.W.4
Lay Jr., J.O.5
Kadlubar, F.F.6
-
22
-
-
0028881705
-
Determination of in vitro formed DNA adducts of 2-amino-1-methyl-6- phenylimidazo [4,5-6] pyridine using capillary liquid chromatography/ electrospray ionization/tandem mass spectrometry
-
Rindgen, D., Turesky, R. J., and Vouros, P. (1995) Determination of in vitro formed DNA adducts of 2-amino-1-methyl-6-phenylimidazo [4,5-6] pyridine using capillary liquid chromatography/electrospray ionization/tandem mass spectrometry. Chem. Res. Toxicol. 8, 1005-1013.
-
(1995)
Chem. Res. Toxicol.
, vol.8
, pp. 1005-1013
-
-
Rindgen, D.1
Turesky, R.J.2
Vouros, P.3
-
23
-
-
0029006820
-
Heterogeneous DNA adduct formation in vitro by the acetylated food mutagen 2-(acetoxyamino)-1-methyl-6-phenylimidazo[4,5-b]pyridine: A fluorescence spectroscopic study
-
Marsch, G. A., Goldman, E. N., Fultz, E., Shen, N. H., and Turteltaub, K. W. (1995) Heterogeneous DNA adduct formation in vitro by the acetylated food mutagen 2-(acetoxyamino)-1-methyl-6-phenylimidazo[4,5-b]pyridine: A fluorescence spectroscopic study. Chem. Res. Toxicol. 8, 659-670.
-
(1995)
Chem. Res. Toxicol.
, vol.8
, pp. 659-670
-
-
Marsch, G.A.1
Goldman, E.N.2
Fultz, E.3
Shen, N.H.4
Turteltaub, K.W.5
-
24
-
-
0345830965
-
Structural characterization of carcinogen-modified oligodeoxynucleotide adducts using matrix-assisted laser desorption/ ionization mass spectrometry
-
Brown, K., Harvey, C. A., Turteltaub, K. W., and Shields, S. J. (2003) Structural characterization of carcinogen-modified oligodeoxynucleotide adducts using matrix-assisted laser desorption/ ionization mass spectrometry. J. Mass Spectrom. 38, 68-79.
-
(2003)
J. Mass Spectrom.
, vol.38
, pp. 68-79
-
-
Brown, K.1
Harvey, C.A.2
Turteltaub, K.W.3
Shields, S.J.4
-
25
-
-
0035902598
-
Solution structure of the 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine C8-deoxyguanosine adduct in duplex DNA
-
Brown, K., Hingerty, B. E., Guenther, E. A., Krishnan, V. V., Broyde, S., Turteltaub, K. W., and Cosman, M. (2001) Solution structure of the 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine C8-deoxyguanosine adduct in duplex DNA. Proc. Natl. Acad. Sci. U.S.A. 98, 8507-8512.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8507-8512
-
-
Brown, K.1
Hingerty, B.E.2
Guenther, E.A.3
Krishnan, V.V.4
Broyde, S.5
Turteltaub, K.W.6
Cosman, M.7
-
26
-
-
0028944521
-
Analysis of mutations induced by 2-amino-1-methyl-6-phenylimidazo[4,5-b]- pyridine (PhIP) in human lymphoblastoid cells
-
Morgenthaler, P. M., and Holzhauser, D. (1995) Analysis of mutations induced by 2-amino-1-methyl-6-phenylimidazo[4,5-b]-pyridine (PhIP) in human lymphoblastoid cells. Carcinogenesis 16, 713-718.
-
(1995)
Carcinogenesis
, vol.16
, pp. 713-718
-
-
Morgenthaler, P.M.1
Holzhauser, D.2
-
27
-
-
0029970360
-
Mutational spectra of the dietary carcinogen 2-amino-1-methyl-6- phenylimidazo [4,5-b]pyridine(PhIP) at the Chinese hamsters hprt locus
-
Yadollahi-Farsani, M., Gooderham, N., Davies, D., and Boobis, A. (1996) Mutational spectra of the dietary carcinogen 2-amino-1-methyl-6-phenylimidazo [4,5-b]pyridine(PhIP) at the Chinese hamsters hprt locus. Carcinogenesis 17, 617-624.
-
(1996)
Carcinogenesis
, vol.17
, pp. 617-624
-
-
Yadollahi-Farsani, M.1
Gooderham, N.2
Davies, D.3
Boobis, A.4
-
28
-
-
6844261154
-
Agreement of mutational characteristics of heterocyclic amines in lacI of the Big Blue mouse with those in tumor related genes in rodents
-
Okonogi, H., Ushijima, T., Zhang, X., Heddle, J., Suzuki, T., Sofuni, T., Felton, J., Tucker, J., Sugimura, T., and Nagao, M. (1997) Agreement of mutational characteristics of heterocyclic amines in lacI of the Big Blue mouse with those in tumor related genes in rodents. Carcinogenesis 18, 745-748.
-
(1997)
Carcinogenesis
, vol.18
, pp. 745-748
-
-
Okonogi, H.1
Ushijima, T.2
Zhang, X.3
Heddle, J.4
Suzuki, T.5
Sofuni, T.6
Felton, J.7
Tucker, J.8
Sugimura, T.9
Nagao, M.10
-
29
-
-
0031566023
-
Effects of gender and species on spectra of mutation induced by 2-amino-1-methyl-6-phenylimidazo [4,5-b]pyridine in the lacI transgene
-
Okonogi, H., Stuart, G. R., Okochi, E., Ushijima, T., Sugimura, T., Glickman, B. W., and Nagao, M. (1997) Effects of gender and species on spectra of mutation induced by 2-amino-1-methyl-6-phenylimidazo [4,5-b]pyridine in the lacI transgene. Mutat. Res. 395, 93-99.
-
(1997)
Mutat. Res.
, vol.395
, pp. 93-99
-
-
Okonogi, H.1
Stuart, G.R.2
Okochi, E.3
Ushijima, T.4
Sugimura, T.5
Glickman, B.W.6
Nagao, M.7
-
30
-
-
0033600909
-
Mutagenesis of the N-(deoxyguanosin-8-yl)-2-amino-1-methyl-6- phenylimidazo [4,5-b]pyridine DNA adduct in mammalian cells. Sequence context effects
-
Shibutani, S., Fernandes, A., Suzuki, N., Zhou, L., Johnson, F., and Grollman, A. P. (1999) Mutagenesis of the N-(deoxyguanosin-8-yl)-2-amino-1- methyl-6-phenylimidazo [4,5-b]pyridine DNA adduct in mammalian cells. Sequence context effects. J. Biol. Chem. 274, 27433-27438.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 27433-27438
-
-
Shibutani, S.1
Fernandes, A.2
Suzuki, N.3
Zhou, L.4
Johnson, F.5
Grollman, A.P.6
-
31
-
-
0036265736
-
Mutagenicity of 2-amino-1-methyl-6-phenylimidazo [4,5-b]pyridine (PhIP) in the mammary gland of Big Blue rats on high-and low-fat diets
-
Yu, M., Jones, M. L., Gong, M., Sinha, R., Schut, H. A., and Snyderwine, E. G. (2002) Mutagenicity of 2-amino-1-methyl-6-phenylimidazo [4,5-b]pyridine (PhIP) in the mammary gland of Big Blue rats on high-and low-fat diets. Carcinogenesis 23, 877-884.
-
(2002)
Carcinogenesis
, vol.23
, pp. 877-884
-
-
Yu, M.1
Jones, M.L.2
Gong, M.3
Sinha, R.4
Schut, H.A.5
Snyderwine, E.G.6
-
32
-
-
0035115614
-
Early detection of 2-amino-1-methyl-6-phenylimidazo (4,5-b)pyridine(PhIP) -induced mutations within the Apc gene of rat colon
-
Burnouf, D., Miturski, R., Nagao, M., Nakagama, H., Nothisen, M., Wagner, J., and Fuchs, R. P. (2001) Early detection of 2-amino-1-methyl-6-phenylimidazo (4,5-b)pyridine(PhIP)-induced mutations within the Apc gene of rat colon. Carcinogenesis 22, 329-335.
-
(2001)
Carcinogenesis
, vol.22
, pp. 329-335
-
-
Burnouf, D.1
Miturski, R.2
Nagao, M.3
Nakagama, H.4
Nothisen, M.5
Wagner, J.6
Fuchs, R.P.7
-
33
-
-
0026630266
-
APC mutations occur early during colorectal tumorigenesis
-
Powell, S. M., Zilz, N., Beazer-Barclay, Y., Bryan, T. M., Hamilton, S. R., Thibodeau, S. N., Vogelstein, B., and Kanzler, K. W. (1992) APC mutations occur early during colorectal tumorigenesis. Nature 359, 235-237.
-
(1992)
Nature
, vol.359
, pp. 235-237
-
-
Powell, S.M.1
Zilz, N.2
Beazer-Barclay, Y.3
Bryan, T.M.4
Hamilton, S.R.5
Thibodeau, S.N.6
Vogelstein, B.7
Kanzler, K.W.8
-
34
-
-
0026894053
-
Somatic mutations of the APC gene in colorectal tumors: Mutation cluster region in the APC gene
-
Miyoshi, Y., Nagase, H., Ando, H., Horii, A., Ichii, S., Nakatsuru, S., Aoki, T., Miki, Y., Mori, T., and Nakamura, Y. (1992) Somatic mutations of the APC gene in colorectal tumors: Mutation cluster region in the APC gene. Hum. Mol. Genet. 1, 229-233.
-
(1992)
Hum. Mol. Genet.
, vol.1
, pp. 229-233
-
-
Miyoshi, Y.1
Nagase, H.2
Ando, H.3
Horii, A.4
Ichii, S.5
Nakatsuru, S.6
Aoki, T.7
Miki, Y.8
Mori, T.9
Nakamura, Y.10
-
35
-
-
0033737292
-
Characterization of mutations induced by 2-amino-1-methyl-6-phenylimidazo [4,5-b] pyridine in the colon of gpt delta transgenic mouse: Novel G:C deletions beside runs of identical bases
-
Masumura, K., Matsui, K., Yamada, M., Horiguchi, M., Ishida, K., Watanabe, M., Wakabayashi, K., and Nohmi, T. (2000) Characterization of mutations induced by 2-amino-1-methyl-6-phenylimidazo [4,5-b] pyridine in the colon of gpt delta transgenic mouse: Novel G:C deletions beside runs of identical bases. Carcinogenesis 21, 2049-2056.
-
(2000)
Carcinogenesis
, vol.21
, pp. 2049-2056
-
-
Masumura, K.1
Matsui, K.2
Yamada, M.3
Horiguchi, M.4
Ishida, K.5
Watanabe, M.6
Wakabayashi, K.7
Nohmi, T.8
-
36
-
-
0028878974
-
Specific 5′-GGGA-3′→5′-GGA-3′ mutation of the Apc gene in rat colon tumors induced by 2-amino-1-methyl-6-phenylimidazo[4, 5-6]pyridine
-
Kakiuchi, H., Watanabe, M., Ushijima, T., Toyota, M., Imai, K., Weisburger, J. H., Sugimura, T., and Nagao, M. (1995) Specific 5′-GGGA-3′→5′-GGA-3′ mutation of the Apc gene in rat colon tumors induced by 2-amino-1-methyl-6-phenylimidazo[4,5-6]pyridine. Proc. Natl. Acad. Sci. U.S.A. 92, 910-914.
-
(1995)
Proc. Natl. Acad. Sci. U.S.A.
, vol.92
, pp. 910-914
-
-
Kakiuchi, H.1
Watanabe, M.2
Ushijima, T.3
Toyota, M.4
Imai, K.5
Weisburger, J.H.6
Sugimura, T.7
Nagao, M.8
-
37
-
-
0032703301
-
Replication of damaged DNA: Molecular defect in xeroderma pigmentosum variant cells
-
Cordonnier, A. M., and Fuchs, R. P. (1999) Replication of damaged DNA: Molecular defect in xeroderma pigmentosum variant cells. Mutat. Res. 435, 111-119.
-
(1999)
Mutat. Res.
, vol.435
, pp. 111-119
-
-
Cordonnier, A.M.1
Fuchs, R.P.2
-
38
-
-
0037115955
-
How DNA lesions are turned into mutations within cells?
-
Pages, V., and Fuchs, R. P. (2002) How DNA lesions are turned into mutations within cells? Oncogene 21, 8957-8966.
-
(2002)
Oncogene
, vol.21
, pp. 8957-8966
-
-
Pages, V.1
Fuchs, R.P.2
-
39
-
-
0035902484
-
Mechanism of DNA polymerase II-mediated frameshift mutagenesis
-
Becherel, O. J., and Fuchs, R. P. (2001) Mechanism of DNA polymerase II-mediated frameshift mutagenesis. Proc. Natl. Acad. Sci. U.S.A. 98, 8566-8571.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8566-8571
-
-
Becherel, O.J.1
Fuchs, R.P.2
-
40
-
-
0034669125
-
All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis
-
Napolitano, R., Janel-Bintz, R., Wagner, J., and Fuchs, R. P. (2000) All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis. EMBO J. 19, 6259-6265.
-
(2000)
EMBO J.
, vol.19
, pp. 6259-6265
-
-
Napolitano, R.1
Janel-Bintz, R.2
Wagner, J.3
Fuchs, R.P.4
-
41
-
-
0034951705
-
DNA polymerases II and V mediate respectively mutagenic (-2 frameshift) and error-free bypass of a single N-2-acetylaminofluorene adduct
-
Fuchs, R. P., Koffel-Schwartz, N., Pelet, S., Janel-Bintz, R., Napolitano, R., Becherel, O. J., Broschard, T. H., Burnouf, D. Y., and Wagner, J. (2001) DNA polymerases II and V mediate respectively mutagenic (-2 frameshift) and error-free bypass of a single N-2-acetylaminofluorene adduct. Biochem. Soc. Trans. 29, 191-195.
-
(2001)
Biochem. Soc. Trans.
, vol.29
, pp. 191-195
-
-
Fuchs, R.P.1
Koffel-Schwartz, N.2
Pelet, S.3
Janel-Bintz, R.4
Napolitano, R.5
Becherel, O.J.6
Broschard, T.H.7
Burnouf, D.Y.8
Wagner, J.9
-
42
-
-
19444383801
-
Trading places: How do DNA polymerases switch during translesion DNA synthesis?
-
Friedberg, E. C., Lehmann, A. R., and Fuchs, R. P. (2005) Trading places: how do DNA polymerases switch during translesion DNA synthesis? Mol. Cell 18, 499-505.
-
(2005)
Mol. Cell
, vol.18
, pp. 499-505
-
-
Friedberg, E.C.1
Lehmann, A.R.2
Fuchs, R.P.3
-
43
-
-
0035997344
-
Error-prone repair DNA polymerases in prokaryotes and eukaryotes
-
Goodman, M. F. (2002) Error-prone repair DNA polymerases in prokaryotes and eukaryotes. Annu. Rev. Biochem. 71, 17-50.
-
(2002)
Annu. Rev. Biochem.
, vol.71
, pp. 17-50
-
-
Goodman, M.F.1
-
44
-
-
1942439667
-
Switching from high-fidelity replicases to low-fidelity lesion-bypass polymerases
-
Plosky, B. S., and Woodgate, R. (2004) Switching from high-fidelity replicases to low-fidelity lesion-bypass polymerases. Curr. Opin. Genet. Dev. 14, 113-119.
-
(2004)
Curr. Opin. Genet. Dev.
, vol.14
, pp. 113-119
-
-
Plosky, B.S.1
Woodgate, R.2
-
45
-
-
4344595310
-
Enzymatic switching for efficient and accurate translesion DNA replication
-
McCulloch, S. D., Kokoska, R. J., Chilkova, O., Welch, C. M., Johansson, E., Burgers, P. M., and Kunkel, T. A. (2004) Enzymatic switching for efficient and accurate translesion DNA replication. Nucleic Acids Res. 32, 4665-4675.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 4665-4675
-
-
McCulloch, S.D.1
Kokoska, R.J.2
Chilkova, O.3
Welch, C.M.4
Johansson, E.5
Burgers, P.M.6
Kunkel, T.A.7
-
46
-
-
0031038053
-
Abasic translesion synthesis by DNA polymerase β violates the "A-rule". Novel types of nucleotide incorporation by human DNA polymerase β at an abasic lesion in different sequence contexts
-
Efrati, E., Tocco, G., Eritja, R., Wilson, S. H., and Goodman, M. F. (1997) Abasic translesion synthesis by DNA polymerase β violates the "A-rule". Novel types of nucleotide incorporation by human DNA polymerase β at an abasic lesion in different sequence contexts. J. Biol. Chem. 272, 2559-2569.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 2559-2569
-
-
Efrati, E.1
Tocco, G.2
Eritja, R.3
Wilson, S.H.4
Goodman, M.F.5
-
47
-
-
0030836866
-
Fidelity of Escherichia coli DNA polymerase III holoenzyme. The effects of β, γ complex processivity proteins and € proofreading exonuclease on nucleotide misincorporation efficiencies
-
Bloom, L. B., Chen, X., Fygenson, D. K., Turner, J., O'Donnell, M., and Goodman, M. F. (1997) Fidelity of Escherichia coli DNA polymerase III holoenzyme. The effects of β, γ complex processivity proteins and € proofreading exonuclease on nucleotide misincorporation efficiencies. J. Biol. Chem. 272, 27919-27930.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 27919-27930
-
-
Bloom, L.B.1
Chen, X.2
Fygenson, D.K.3
Turner, J.4
O'Donnell, M.5
Goodman, M.F.6
-
48
-
-
2542440567
-
Error-prone replication for better or worse
-
Tippin, B., Pham, P., and Goodman, M. F. (2004) Error-prone replication for better or worse. Trends. Microbiol. 12, 288-295.
-
(2004)
Trends. Microbiol.
, vol.12
, pp. 288-295
-
-
Tippin, B.1
Pham, P.2
Goodman, M.F.3
-
49
-
-
0013997442
-
Frameshift mutations and the genetic code
-
Streisinger, G., Okada, Y., Emrich, J., Newton, J., Tsugita, A., Terzaghi, E., and Inouye, M. (1966) Frameshift mutations and the genetic code. Cold Spring Harb. Symp. Quantum Biol. 31, 77-84.
-
(1966)
Cold Spring Harb. Symp. Quantum Biol.
, vol.31
, pp. 77-84
-
-
Streisinger, G.1
Okada, Y.2
Emrich, J.3
Newton, J.4
Tsugita, A.5
Terzaghi, E.6
Inouye, M.7
-
50
-
-
0025109103
-
Misalignment-mediated DNA synthesis errors
-
Kunkel, T. A. (1990) Misalignment-mediated DNA synthesis errors. Biochemistry 29, 8003-8011.
-
(1990)
Biochemistry
, vol.29
, pp. 8003-8011
-
-
Kunkel, T.A.1
-
51
-
-
0027196408
-
On the mechanism of frameshift (deletion) mutagenesis in vitro
-
Shibutani, S., and Grollman, A. P. (1993) On the mechanism of frameshift (deletion) mutagenesis in vitro. J. Biol. Chem. 268, 11703-11710.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 11703-11710
-
-
Shibutani, S.1
Grollman, A.P.2
-
52
-
-
0025326603
-
N-acetoxy-N-acetyl-2-aminofluorene-induced mutagenesis in the lacI gene of Escherichia coli
-
Schaaper, R. M., Koffel-Schwartz, N., and Fuchs, R. P. (1990) N-acetoxy-N-acetyl-2-aminofluorene-induced mutagenesis in the lacI gene of Escherichia coli. Carcinogenesis 11, 1087-1095.
-
(1990)
Carcinogenesis
, vol.11
, pp. 1087-1095
-
-
Schaaper, R.M.1
Koffel-Schwartz, N.2
Fuchs, R.P.3
-
53
-
-
0035369086
-
Structure of the replicating complex of a pol α family DNA polymerase
-
Franklin, M. C., Wang, J., and Steitz, T. A. (2001) Structure of the replicating complex of a pol α family DNA polymerase. Cell 105, 657-667.
-
(2001)
Cell
, vol.105
, pp. 657-667
-
-
Franklin, M.C.1
Wang, J.2
Steitz, T.A.3
-
54
-
-
0033616725
-
Crystal structure of a thermostable type B DNA polymerase from Thermococcus gorgonarius
-
Hopfner, K. P., Eichinger, A., Engh, R. A., Laue, F., Ankenbauer, W., Huber, R., and Angerer, B. (1999) Crystal structure of a thermostable type B DNA polymerase from Thermococcus gorgonarius. Proc. Natl. Acad. Sci. U.S.A. 96, 3600-3605.
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 3600-3605
-
-
Hopfner, K.P.1
Eichinger, A.2
Engh, R.A.3
Laue, F.4
Ankenbauer, W.5
Huber, R.6
Angerer, B.7
-
55
-
-
0034595517
-
Crystal structure of a pol α family DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. 9 degrees N-7
-
Rodriguez, A. C., Park, H. W., Mao, C., and Beese, L. S. (2000) Crystal structure of a pol α family DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. 9 degrees N-7. J. Mol. Biol. 299, 447-462.
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 447-462
-
-
Rodriguez, A.C.1
Park, H.W.2
Mao, C.3
Beese, L.S.4
-
56
-
-
0033570179
-
Crystal structure of an archaebacterial DNA polymerase
-
Zhao, Y., Jeruzalmi, D., Moarefi, I., Leighton, L., Lasken, R., and Kuriyan, J. (1999) Crystal structure of an archaebacterial DNA polymerase. Struct. Fold. Des. 7, 1189-1199.
-
(1999)
Struct. Fold. Des.
, vol.7
, pp. 1189-1199
-
-
Zhao, Y.1
Jeruzalmi, D.2
Moarefi, I.3
Leighton, L.4
Lasken, R.5
Kuriyan, J.6
-
57
-
-
0347416784
-
Replicative enzymes, DNA polymerase alpha (pol a), and in vitro aging
-
Srivastava, V. K., and Busbee, D. L. (2003) Replicative enzymes, DNA polymerase alpha (pol a), and in vitro aging. Exp. Gerontol. 38, 1285-1297.
-
(2003)
Exp. Gerontol.
, vol.38
, pp. 1285-1297
-
-
Srivastava, V.K.1
Busbee, D.L.2
-
58
-
-
0025826051
-
Eukaryotic DNA polymerases
-
Wang, T. S. (1991) Eukaryotic DNA polymerases. Annu. Rev. Biochem. 60, 513-552.
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 513-552
-
-
Wang, T.S.1
-
59
-
-
0031587827
-
Crystal structure of a pol α family replication DNA polymerase from bacteriophage RB69
-
Wang, J., Sattar, A. K., Wang, C. C., Karam, J. D., Konigsberg, W. H., and Steitz, T. A. (1997) Crystal structure of a pol α family replication DNA polymerase from bacteriophage RB69. Cell 89, 1087-1099.
-
(1997)
Cell
, vol.89
, pp. 1087-1099
-
-
Wang, J.1
Sattar, A.K.2
Wang, C.C.3
Karam, J.D.4
Konigsberg, W.H.5
Steitz, T.A.6
-
60
-
-
0032692565
-
Building a replisome from interacting pieces: Sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex
-
Shamoo, Y., and Steitz, T. A. (1999) Building a replisome from interacting pieces: Sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex. Cell 99, 155-166.
-
(1999)
Cell
, vol.99
, pp. 155-166
-
-
Shamoo, Y.1
Steitz, T.A.2
-
61
-
-
0033581011
-
DNA polymerases: Structural diversity and common mechanisms
-
Steitz, T. A. (1999) DNA polymerases: Structural diversity and common mechanisms. J. Biol. Chem. 274, 17395-17398.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 17395-17398
-
-
Steitz, T.A.1
-
62
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N., and Bourne, P. E. (2000) The Protein Data Bank. Nucleic Acids Res. 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
63
-
-
0003712431
-
-
University of California, San Francisco, CA
-
Case, D. A., Pearlman, D. A., Caldwell, J. W., Cheatham, T. E., Ross, W. S., Simmerling, C. L., Darden, T. A. M., Merz, K., Stanton, R. V., Cheng, A. L., Vincent, J. J., Crowley, M., Ferguson, D. M., Tsui, V., Radmer, R. J., Duan, Y., Pitera, J., Massova, I., Seibel, G. L., Singh, U. C., Weiner, P. K., and Kollman, P. A. (1999) AMBER 6.0, University of California, San Francisco, CA.
-
(1999)
AMBER 6.0
-
-
Case, D.A.1
Pearlman, D.A.2
Caldwell, J.W.3
Cheatham, T.E.4
Ross, W.S.5
Simmerling, C.L.6
Darden, T.A.M.7
Merz, K.8
Stanton, R.V.9
Cheng, A.L.10
Vincent, J.J.11
Crowley, M.12
Ferguson, D.M.13
Tsui, V.14
Radmer, R.J.15
Duan, Y.16
Pitera, J.17
Massova, I.18
Seibel, G.L.19
Singh, U.C.20
Weiner, P.K.21
Kollman, P.A.22
more..
-
65
-
-
0029011701
-
A 2nd generation force-field for the simulation of proteins, nucleic-acids, and organic-molecules
-
Cornell, W. D., Cieplak, P., Bayly, C. I., Gould, I. R., Merz, K. M., Ferguson, D. M., Spellmeyer, D. C., Fox, T., Caldwell, J. W., and Kollman, P. A. (1995) A 2nd generation force-field for the simulation of proteins, nucleic-acids, and organic-molecules. J. Am. Chem. Soc. 117, 5179-5197.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Bayly, C.I.3
Gould, I.R.4
Merz, K.M.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
66
-
-
0004133516
-
-
Gaussian, Inc., Pittsburgh, PA
-
Frisch, J. M., Trucks, W. G., Schlegel, B. H., Scuseria, E. G., Robb, A. M., Cheeseman, R. J., Zakrzewski, G. V., Montgomery, A. J., Stratmann, E. R., Burant, C. J., Dapprich, S., Millam, M. J., Daniels, D. A., Kudin, N. K., Strain, C. M., Farkas, O., Tomasi, J., Barone, V., Cossi, M., Cammi, R., Mennucci, B., Pomelli, C., Adamo, C., Clifford, S., Ochterski, J., Petersson, A. G., Ayala, Y. P., Cui, Q., Morokuma, K., Malick, K. D., Rabuck, D. A., Raghavachari, K., Foresman, B. J., Cioslowski, J., Ortiz, V. J., Baboul, G. A., Stefanov, B. B., Liu, G., Liashenko, A., Piskorz, P., Komaromi, I., Gomperts, R., Martin, L. R., Fox, J. D., Keith, T., Al-Laham, A. M., Peng, Y. C., Nanayakkara, A., Gonzalez, C., Challacombe, M., Gill, W. M. P., Johnson, B., Chen, W., Wong, W. M., Andres, L. J., Gonzalez, C., Head-Gordon, M., Replogle, S. E., and Pople, A. J. (1998) Gaussian 98 (Revision A.7), Gaussian, Inc., Pittsburgh, PA.
-
(1998)
Gaussian 98 (Revision A.7)
-
-
Frisch, J.M.1
Trucks, W.G.2
Schlegel, B.H.3
Scuseria, E.G.4
Robb, A.M.5
Cheeseman, R.J.6
Zakrzewski, G.V.7
Montgomery, A.J.8
Stratmann, E.R.9
Burant, C.J.10
Dapprich, S.11
Millam, M.J.12
Daniels, D.A.13
Kudin, N.K.14
Strain, C.M.15
Farkas, O.16
Tomasi, J.17
Barone, V.18
Cossi, M.19
Cammi, R.20
Mennucci, B.21
Pomelli, C.22
Adamo, C.23
Clifford, S.24
Ochterski, J.25
Petersson, A.G.26
Ayala, Y.P.27
Cui, Q.28
Morokuma, K.29
Malick, K.D.30
Rabuck, D.A.31
Raghavachari, K.32
Foresman, B.J.33
Cioslowski, J.34
Ortiz, V.J.35
Baboul, G.A.36
Stefanov, B.B.37
Liu, G.38
Liashenko, A.39
Piskorz, P.40
Komaromi, I.41
Gomperts, R.42
Martin, L.R.43
Fox, J.D.44
Keith, T.45
Al-Laham, A.M.46
Peng, Y.C.47
Nanayakkara, A.48
Gonzalez, C.49
Challacombe, M.50
Gill, W.M.P.51
Johnson, B.52
Chen, W.53
Wong, W.M.54
Andres, L.J.55
Gonzalez, C.56
Head-Gordon, M.57
Replogle, S.E.58
Pople, A.J.59
more..
-
67
-
-
3042524904
-
A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges - The Resp model
-
Bayly, C. I., Cieplak, P., Cornell, W. D., and Kollman, P. A. (1993) A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges-The Resp model. J. Phys. Chem. 97, 10269-10280.
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 10269-10280
-
-
Bayly, C.I.1
Cieplak, P.2
Cornell, W.D.3
Kollman, P.A.4
-
68
-
-
0032704090
-
Conformational analysis of the major DNA adduct derived from the food mutagen 2-amino-3-methylimidazo[4,5-f]quinoline
-
Wu, X., Shapiro, R., and Broyde, S. (1999) Conformational analysis of the major DNA adduct derived from the food mutagen 2-amino-3-methylimidazo[4,5-f] quinoline. Chem. Res. Toxicol. 12, 895-905.
-
(1999)
Chem. Res. Toxicol.
, vol.12
, pp. 895-905
-
-
Wu, X.1
Shapiro, R.2
Broyde, S.3
-
69
-
-
0035366319
-
Evading the proofreading machinery of a replicative DNA polymerase: Induction of a mutation by an environmental carcinogen
-
Perlow, R. A., and Broyde, S. (2001) Evading the proofreading machinery of a replicative DNA polymerase: Induction of a mutation by an environmental carcinogen. J. Mol. Biol. 309, 519-536.
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 519-536
-
-
Perlow, R.A.1
Broyde, S.2
-
70
-
-
33846823909
-
Particle mesh ewald - An NLog(N) method for ewald sums in large systems
-
Darden, T., York, D., and Pedersen, L. (1993) Particle mesh ewald-An NLog(N) method for ewald sums in large systems. J. Phys. Chem. 98, 10089-10092.
-
(1993)
J. Phys. Chem.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
71
-
-
33646940952
-
Numerical integration of Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
Ryckaert, J. P., Ciccotti, G., and Berendsen, H. J. C. (1977) Numerical integration of Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes. J. Comput. Phys. 23, 327-341.
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
72
-
-
0001430231
-
The flying ice cube: Velocity rescaling in molecular dynamics leads to violation of energy equipartition
-
Harvey, S. C., Tan, R. K. Z., and Cheatham, T. E. (1998) The flying ice cube: Velocity rescaling in molecular dynamics leads to violation of energy equipartition. J. Comput. Chem. 19, 726-740.
-
(1998)
J. Comput. Chem.
, vol.19
, pp. 726-740
-
-
Harvey, S.C.1
Tan, R.K.Z.2
Cheatham, T.E.3
-
73
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W. L., Chandreskhar, J., Madura, J. D., Imprey, R. W., and Klein, M. L. (1983) Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 79, 926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandreskhar, J.2
Madura, J.D.3
Imprey, R.W.4
Klein, M.L.5
-
74
-
-
33750587438
-
Molecular-dynamics with coupling to an external bath
-
Berendsen, H. J. C., Postma, J. P. M., Vangunsteren, W. F., Dinola, A., and Haak, J. R. (1984) Molecular-dynamics with coupling to an external bath. J. Chem. Phys. 81, 3684-3690.
-
(1984)
J. Chem. Phys.
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Vangunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
76
-
-
0029863863
-
Comparison of crystal structure and theory for 2-amino-1-methyl-6- phenylimidazo [4,5-b]pyridine
-
Parkin, S., Marsch, G. A., Hope, H., Whitney, E., Winter, N. W., Colvin, M. E., Felton, J. S., and Turteltaub, K. W. (1996) Comparison of crystal structure and theory for 2-amino-1-methyl-6-phenylimidazo [4,5-b]pyridine. Chem. Res. Toxicol. 9, 574-579.
-
(1996)
Chem. Res. Toxicol.
, vol.9
, pp. 574-579
-
-
Parkin, S.1
Marsch, G.A.2
Hope, H.3
Whitney, E.4
Winter, N.W.5
Colvin, M.E.6
Felton, J.S.7
Turteltaub, K.W.8
-
77
-
-
0028329729
-
Mutation and repair induced by the carcinogen 2-(hydroxyamino)-1-methyl- 6-phenylimidazo [4,5-6] pyridine (N-OH-PhIP) in the dihydrofolate reductase gene of Chinese hamster ovary cells and conformational modeling of the dG-C8-PhIP adduct in DNA
-
Carothers, A. M., Yuan, W., Hingerty, B. E., Broyde, S., Grunberger, D., and Snyderwine, E. G. (1994) Mutation and repair induced by the carcinogen 2-(hydroxyamino)-1-methyl-6-phenylimidazo [4,5-6] pyridine (N-OH-PhIP) in the dihydrofolate reductase gene of Chinese hamster ovary cells and conformational modeling of the dG-C8-PhIP adduct in DNA. Chem. Res. Toxicol. 7, 209-218.
-
(1994)
Chem. Res. Toxicol.
, vol.7
, pp. 209-218
-
-
Carothers, A.M.1
Yuan, W.2
Hingerty, B.E.3
Broyde, S.4
Grunberger, D.5
Snyderwine, E.G.6
-
78
-
-
0031774216
-
Replication of non-hydrogen bonded bases by DNA polymerases: A mechanism for steric matching
-
Kool, E. T. (1998) Replication of non-hydrogen bonded bases by DNA polymerases: A mechanism for steric matching. Biopolymers 48, 3-17.
-
(1998)
Biopolymers
, vol.48
, pp. 3-17
-
-
Kool, E.T.1
-
79
-
-
0034678016
-
Mimicking the structure and function of DNA: Insights into DNA stability and replication
-
Kool, E. T., Morales, J. C., and Guckian, K. M. (2000) Mimicking the structure and function of DNA: Insights into DNA stability and replication. Angew. Chem., Int. Ed. 39, 990-1009.
-
(2000)
Angew. Chem., Int. Ed.
, vol.39
, pp. 990-1009
-
-
Kool, E.T.1
Morales, J.C.2
Guckian, K.M.3
-
80
-
-
0035997351
-
Active site tightness and substrate fit in DNA replication
-
Kool, E. T. (2002) Active site tightness and substrate fit in DNA replication. Annu. Rev. Biochem. 71, 191-219.
-
(2002)
Annu. Rev. Biochem.
, vol.71
, pp. 191-219
-
-
Kool, E.T.1
-
81
-
-
0034711010
-
Functional hydrogen-bonding map of the minor groove binding tracks of six DNA polymerases
-
Morales, J. C., and Kool, E. T. (2000) Functional hydrogen-bonding map of the minor groove binding tracks of six DNA polymerases. Biochemistry 39, 12979-12988.
-
(2000)
Biochemistry
, vol.39
, pp. 12979-12988
-
-
Morales, J.C.1
Kool, E.T.2
-
82
-
-
2342419732
-
DNA replication fidelity
-
Kunkel, T. A. (2004) DNA replication fidelity. J. Biol. Chem. 279, 16895-16898.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16895-16898
-
-
Kunkel, T.A.1
-
83
-
-
13544276569
-
Structure of a high-fidelity DNA polymerase bound to a benzo[a]pyrene adduct that blocks replication
-
Hsu, G. W., Huang, X., Luneva, N. P., Geacintov, N. E., and Beese, L. S. (2004) Structure of a high-fidelity DNA polymerase bound to a benzo[a]pyrene adduct that blocks replication. J. Biol. Chem. 280, 3764-3770.
-
(2004)
J. Biol. Chem.
, vol.280
, pp. 3764-3770
-
-
Hsu, G.W.1
Huang, X.2
Luneva, N.P.3
Geacintov, N.E.4
Beese, L.S.5
-
84
-
-
9244229513
-
Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis
-
Dutta, S., Li, Y., Johnson, D., Dzantiev, L., Richardson, C. C., Romano, L. J., and Ellenberger, T. (2004) Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis. Proc. Natl. Acad. Sci. U.S.A. 101, 16186-16191.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 16186-16191
-
-
Dutta, S.1
Li, Y.2
Johnson, D.3
Dzantiev, L.4
Richardson, C.C.5
Romano, L.J.6
Ellenberger, T.7
-
85
-
-
0041864009
-
Replication of a cis-syn thymine dimer at atomic resolution
-
Ling, H., Boudsocq, F., Plosky, B. S., Woodgate, R., and Yang, W. (2003) Replication of a cis-syn thymine dimer at atomic resolution. Nature 424, 1083-1087.
-
(2003)
Nature
, vol.424
, pp. 1083-1087
-
-
Ling, H.1
Boudsocq, F.2
Plosky, B.S.3
Woodgate, R.4
Yang, W.5
-
86
-
-
14644432415
-
Base selectivity is impaired by mutants that perturb hydrogen bonding networks in the RB69 DNA polymerase active site
-
Yang, G., Wang, J., and Konigsberg, W. (2005) Base selectivity is impaired by mutants that perturb hydrogen bonding networks in the RB69 DNA polymerase active site. Biochemistry 44, 3338-3346.
-
(2005)
Biochemistry
, vol.44
, pp. 3338-3346
-
-
Yang, G.1
Wang, J.2
Konigsberg, W.3
-
87
-
-
3843122085
-
Influence of DNA structure on DNA polymerase β active site function: Extension of mutagenic DNA intermediates
-
Beard, W. A., Shock, D. D., and Wilson, S. H. (2004) Influence of DNA structure on DNA polymerase β active site function: Extension of mutagenic DNA intermediates. J. Biol. Chem. 279, 31921-31929.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 31921-31929
-
-
Beard, W.A.1
Shock, D.D.2
Wilson, S.H.3
-
88
-
-
0035378482
-
The effect of DNA structure on the catalytic efficiency and fidelity of human DNA polymerase β on templates with platinum-DNA adducts
-
Vaisman, A., Warren, M. W., and Chaney, S. G. (2001) The effect of DNA structure on the catalytic efficiency and fidelity of human DNA polymerase β on templates with platinum-DNA adducts. J. Biol. Chem. 276, 18999-19005.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 18999-19005
-
-
Vaisman, A.1
Warren, M.W.2
Chaney, S.G.3
-
89
-
-
0028033727
-
Structural characterization of two interchangeable conformations of a 2-aminofluorene-modified DNA oligomer by NMR and energy minimization
-
Eckel, L. M., and Krugh, T. R. (1994) Structural characterization of two interchangeable conformations of a 2-aminofluorene-modified DNA oligomer by NMR and energy minimization. Biochemistry 33, 13611-13624.
-
(1994)
Biochemistry
, vol.33
, pp. 13611-13624
-
-
Eckel, L.M.1
Krugh, T.R.2
-
90
-
-
0028323638
-
NMR structural studies of a 15-mer DNA duplex from a ras protooncogene modified with the carcinogen 2-aminofluorene: Conformational heterogeneity
-
Cho, B. P., Beland, F. A., and Marques, M. M. (1994) NMR structural studies of a 15-mer DNA duplex from a ras protooncogene modified with the carcinogen 2-aminofluorene: Conformational heterogeneity. Biochemistry 33, 1373-1384.
-
(1994)
Biochemistry
, vol.33
, pp. 1373-1384
-
-
Cho, B.P.1
Beland, F.A.2
Marques, M.M.3
-
91
-
-
0030757459
-
Conformational heterogeneity of arylamine-modified DNA: F-19 NMR evidence
-
Zhou, L., Rajabzadeh, M., Traficante, D. D., and Cho, B. S. P. (1997) Conformational heterogeneity of arylamine-modified DNA: F-19 NMR evidence. J. Am. Chem. Soc. 119, 5384-5389.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 5384-5389
-
-
Zhou, L.1
Rajabzadeh, M.2
Traficante, D.D.3
Cho, B.S.P.4
-
94
-
-
0031800438
-
Nuclear magnetic resonance solution structures of covalent aromatic amine-DNA adducts and their mutagenic relevance
-
Patel, D. J., Mao, B., Gu, Z., Hingerty, B. E., Gorin, A., Basu, A. K., and Broyde, S. (1998) Nuclear magnetic resonance solution structures of covalent aromatic amine-DNA adducts and their mutagenic relevance. Chem. Res. Toxicol. 11, 391-407.
-
(1998)
Chem. Res. Toxicol.
, vol.11
, pp. 391-407
-
-
Patel, D.J.1
Mao, B.2
Gu, Z.3
Hingerty, B.E.4
Gorin, A.5
Basu, A.K.6
Broyde, S.7
-
95
-
-
9644265249
-
Dynamic Conformational heterogeneities of carcinogen-DNA adducts and their mutagenic relevance
-
Cho, B. P. (2004) Dynamic Conformational heterogeneities of carcinogen-DNA adducts and their mutagenic relevance. J. Environ. Sci. Health Part C C22, 57-90.
-
(2004)
J. Environ. Sci. Health Part C
, vol.C22
, pp. 57-90
-
-
Cho, B.P.1
-
96
-
-
9644276853
-
Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase
-
Hsu, G. W., Kiefer, J. R., Burnouf, D., Becherel, O. J., Fuchs, R. P., and Beese, L. S. (2004) Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase. J. Biol. Chem. 279, 50280-50285.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 50280-50285
-
-
Hsu, G.W.1
Kiefer, J.R.2
Burnouf, D.3
Becherel, O.J.4
Fuchs, R.P.5
Beese, L.S.6
-
97
-
-
0020358778
-
Effect of acetylated and deacetylated 2-aminofluorene adducts on in vitro DNA synthesis
-
Moore, P. D., Rabkin, S. D., Osborn, A. L., King, C. M., and Strauss, B. S. (1982) Effect of acetylated and deacetylated 2-aminofluorene adducts on in vitro DNA synthesis. Proc. Natl. Acad. Sci. U.S.A. 79, 7166-7170.
-
(1982)
Proc. Natl. Acad. Sci. U.S.A.
, vol.79
, pp. 7166-7170
-
-
Moore, P.D.1
Rabkin, S.D.2
Osborn, A.L.3
King, C.M.4
Strauss, B.S.5
-
98
-
-
0028039973
-
Use of single-turnover kinetics to study bulky adduct bypass by T7 DNA polymerase
-
Lindsley, J. E., and Fuchs, R. P. (1994) Use of single-turnover kinetics to study bulky adduct bypass by T7 DNA polymerase. Biochemistry 33, 764-772.
-
(1994)
Biochemistry
, vol.33
, pp. 764-772
-
-
Lindsley, J.E.1
Fuchs, R.P.2
-
99
-
-
0023665219
-
Evidence for in vitro translesion DNA synthesis past a site-specific aminofluorene adduct
-
Michaels, M. L., Johnson, D. L., Reid, T. M., King, C. M., and Romano, L. J. (1987) Evidence for in vitro translesion DNA synthesis past a site-specific aminofluorene adduct. J. Biol. Chem. 262, 14648-14654.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 14648-14654
-
-
Michaels, M.L.1
Johnson, D.L.2
Reid, T.M.3
King, C.M.4
Romano, L.J.5
-
100
-
-
0025685658
-
Role of DNA polymerase 3′-5′ exonuclease activity in the bypass of aminofluorene lesions in DNA
-
Strauss, B. S., and Wang, J. (1990) Role of DNA polymerase 3′-5′ exonuclease activity in the bypass of aminofluorene lesions in DNA. Carcinogenesis 11, 2103-2109.
-
(1990)
Carcinogenesis
, vol.11
, pp. 2103-2109
-
-
Strauss, B.S.1
Wang, J.2
-
101
-
-
0029053782
-
N-2-aminofluorene and N-2 acetylaminofluorene adducts: The local sequence context of an adduct and its chemical structure determine its replication properties
-
Belguise-Valladier, P., and Fuchs, R. P. (1995) N-2-aminofluorene and N-2 acetylaminofluorene adducts: The local sequence context of an adduct and its chemical structure determine its replication properties. J. Mol. Biol. 249, 903-913.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 903-913
-
-
Belguise-Valladier, P.1
Fuchs, R.P.2
-
102
-
-
0032168923
-
Mutagenic specificity of (acetylamino)fluorene-derived DNA adducts in mammalian cells
-
Shibutani, S., Suzuki, N., and Grollman, A. P. (1998) Mutagenic specificity of (acetylamino)fluorene-derived DNA adducts in mammalian cells. Biochemistry 37, 12034-12041.
-
(1998)
Biochemistry
, vol.37
, pp. 12034-12041
-
-
Shibutani, S.1
Suzuki, N.2
Grollman, A.P.3
-
103
-
-
0033525079
-
Interaction of Escherichia coli DNA polymerase I (Klenow fragment) with primer-templates containing N-acetyl-2-aminofluorene or N-2-aminofluorene adducts in the active site
-
Dzantiev, L., and Romano, L. J. (1999) Interaction of Escherichia coli DNA polymerase I (Klenow fragment) with primer-templates containing N-acetyl-2-aminofluorene or N-2-aminofluorene adducts in the active site. J. Biol.Chem. 274, 3279-3284.
-
(1999)
J. Biol.Chem.
, vol.274
, pp. 3279-3284
-
-
Dzantiev, L.1
Romano, L.J.2
-
104
-
-
0030693128
-
-) activity on damaged DNA templates: Effect of proximal and distal template damage on DNA synthesis
-
-) activity on damaged DNA templates: Effect of proximal and distal template damage on DNA synthesis. Biochemistry 36, 15336-15342.
-
(1997)
Biochemistry
, vol.36
, pp. 15336-15342
-
-
Miller, H.1
Grollman, A.P.2
-
105
-
-
0027457947
-
Structural characterization of an N-acetyl-2-aminofluorene (AAF) modified DNA oligomer by NMR, energy minimization, and molecular dynamics
-
O'Handley, S. F., Sanford, D. G., Xu, R., Lester, C. C., Hingerty, B. E., Broyde, S., and Krugh, T. R. (1993) Structural characterization of an N-acetyl-2-aminofluorene (AAF) modified DNA oligomer by NMR, energy minimization, and molecular dynamics. Biochemistry 32, 2481-2497.
-
(1993)
Biochemistry
, vol.32
, pp. 2481-2497
-
-
O'Handley, S.F.1
Sanford, D.G.2
Xu, R.3
Lester, C.C.4
Hingerty, B.E.5
Broyde, S.6
Krugh, T.R.7
|