Abasic translesion synthesis by DNA polymerase β violates the 'A- rule'. Novel types of nucleotide incorporation by human DNA polymerase β at an abasic lesion in different sequence contexts

Journal of Biological Chemistry

Volumn 272, Issue 4, 1997, Pages 2559-2569

  Efrati, Edna ^a   Tocco, Georges ^a   Eritja, Ramon ^b   Wilson, Samuel H ^c   Goodman, Myron F ^a  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^b European Molecular Biology Organization   (Germany)

^c UNIVERSITY OF TEXAS MEDICAL BRANCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE;

ARTICLE; DNA CONFORMATION; DNA STRUCTURE; DNA TEMPLATE; ENZYME ANALYSIS; ENZYME SYNTHESIS; ESCHERICHIA COLI; HUMAN; HUMAN CELL; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; STRUCTURE ANALYSIS;

BASE SEQUENCE; DNA POLYMERASE I; DNA POLYMERASE II; DNA REPLICATION; ELECTROPHORESIS, POLYACRYLAMIDE GEL; HUMANS; MODELS, CHEMICAL; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION;

EID: 0031038053     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.272.4.2559     Document Type: Article

References (52)

1. Lindahl, T. (1982) Annu. Rev. Biochem. 51, 61-87
2. Lindahl, T. (1974) Proc. Natl. Acad. Sci. U. S. A. 71, 3649-3653
3. Lawrence, C. W., Borden, A., Banerjee, S. K., and LeClerc, J. E. (1990) Nucleic Acids Res. 18, 2153-2357
4. Weiss, B., and Grossman, L. (1987) Adv. Enzymol. 60, 1-34
5. Schaaper, R. M., Kunkel, T. A., and Loeb, L. A. (1983) Proc. Natl. Acad. Sci. U. S. A. 80, 487-491
6. Boiteux, S., and Laval, J. (1982) Biochemistry 21, 6746-6751
7. Sagher, D., and Strauss, B. S. (1983) Biochemistry 22, 4518-4526
8. Strauss, B. S. (1991) Bioessays 13, 79-84
9. Randall, S. K., Eritja, R., Kaplan, B. E., Petraska, J., and Goodman, M. F. (1987) J. Biol. Chem. 262, 6864-6870
10. Takeshita, M., Chang, C.-N., Johnson, F., Will, S., and Grollman, A. P. (1987) J. Biol. Chem. 262, 10171-10179
11. Cuniasse, P., Sowers, L. C., Eritja, R., Kaplan, B., Goodman, M. F., Cognet, J. A., LeBret, M., Guschlbauer, W., and Fazakerley, G. V. (1987) Nucleic Acids Res. 15, 8003-8022
12. Kalnik, M. W., Chang, C. N., Grollman, A. P., and Patel, D. J. (1988)Biochemistry 27, 924-931
13. Cuniasse, P., Fazakerley, G. V., Guschlbauer, W., Kaplan, B. E., and Sowers, L. C. (1990) J. Mol. Biol. 213, 303-314
14. Neto, J. B. C., Gentil, A., Cabrai, R. E. C., and Sarasin, A. (1992) J. Biol. Chem. 267, 19718-19723
15. Cabrai Neto, J. B., Caseira Cabrai, R. E., Margot, A., Le Page, F., Sarasin, A., and Gentil, A. (1994) J. Mol. Biol. 240, 416-420
16. Klinedinst, D. K., and Drinkwater, N. R. (1992) Molecular Carcinogenesis 6, 32-42
17. Kunz, B. A., Henson, E. S., Roche, H., Ramotar, D., Nunoshiba, T., and Demple, B. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 8165-8169
18. Kamiya, H., Suzuki, M., Komatsu, Y., Miura, H., Kikuchi, K., Sakaguchi, T., Murata, N., Masutani, C., Hanaoka, F., and Ohtsuka, E. (1992) Nucleic Acids Res. 20, 4409-4415
19. Gibbs, P. E. M., and Lawrence, C. W. (1995) J. Mol. Biol. 251, 229-236
20. Kunkel, T. A. (1986) J. Biol. Chem. 261, 13581-13587
21. Kunkel, T. A., and Soni, A. (1988) J. Biol. Chem. 263, 14784-14789
22. Shibutani, S., and Grollman, A. P. (1993) J. Biol. Chem. 268, 11703-11710
23. Abbotts, J., SenGupta, D. N., Zmudzka, B., Widen, S. G., Notario, V., and Wilson, S. H. (1988) Biochemistry 27, 901-909
24. Copeland, W. C., and Wang, T. S.-F. (1991) J. Biol. Chem. 266, 22739-22748
25. Eritja, R., Walker, P. A., Randall, S. K., Goodman, M. F., and Kaplan, B. E. (1987) Nucleosides & Nucleotides 6, 803-814
26. Singhal, R. K., and Wilson, S. H. (1993) J. Biol. Chem. 268, 15906-15911
27. Creighton, S., and Goodman, M. F. (1995) J. Biol. Chem. 270, 4759-4774
28. Boosalis, M. S., Petruska, J., and Goodman, M. F. (1987) J. Biol. Chem. 262, 14689-14696
29. Goodman, M. F., Creighton, S., Bloom, L. B., and Petruska, J. (1993) Crit. Rev. Biochem. Mol. Biol. 28, 83-126
30. Petruska, J., Goodman, M. F., Boosalis, M. S., Sowers, L. C., Cheong, C., and Tinoco, I., Jr. (1988) Proc. Natl. Acad. Sci. U. S. A. 85, 6252-6256
31. Creighton, S., Huang, M.-M., Cai, H., Arnheim, N., and Goodman, M. F. (1992) J. Biol. Chem. 267, 2633-2639
32. Cai, H., Bloom, L. B., Eritja, R., and Goodman, M. F. (1993) J. Biol. Chem. 268, 23567-23572
33. Mendelman, L. V., Petruska, J., and Goodman, M. F. (1990) J. Biol. Chem. 265, 2338-2346
34. Streisinger, G., Okada, Y., Emrich, J., Newton, J., Tsugita, A., Terzaghi, E., and Inouye, M. (1966) Cold Spring Harbor Symp. Quant. Biol. 31, 77-84
35. Ripley, L. S. (1990) Annu. Rev. Genet. 24, 189-213
36. Lambert, I. B. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 1310-1314
37. Shibutani, S., Margulis, L. A., Geacintov, N. E., and Grollman, A. P. (1993) Biochemistry 32, 7531-7541
38. Clark, J. M. (1988) Nucleic Acids Res. 16, 9677-9686
39. Pelletier, H., Sawaya, M. R., Kumar, A., Wilson, S. H., and Kraut, J. (1994) Science 264, 1891-1903
40. Pelletier, H., Sawaya, M. R., Wolfle, W., Wilson, S. H., and Kraut, J. (1996) Biochemistry 36, 12742-2761
41. Petruska, J., and Goodman, M. F. (1985) J. Biol. Chem. 260, 7533-7539
42. Petruska, J., Sowers, L. C., and Goodman, M. F. (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 1559-1562
43. Mendelman, L. V., Boosalis, M. S., Petruska, J., and Goodman, M. F. (1989) J. Biol. Chem. 264, 14415-14423
44. Sobel, R. W., Horton, J. K., Kuhn, R., Gu, H., Singhal, R. K., Prasad, R., Rajewsky, K., and Wilson, S. H. (1996) Nature 379, 183-186
45. Frosina, G., Fortini, P., Rossi, O., Carrozzino, F., Raspaglio, G., Cox, L. S., Lane, D. P., Abbondandolo, A., and Dogliotti, E. (1996) J. Biol. Chem. 271, 9573-9578
46. Wang, Z., Wu, X., and Friedberg, E. C. (1993) Mol. Cell. Biol. 13, 1051-1058
47. Nishida, C., Reinhard, P., and Linn, S. (1988) J. Biol. Chem. 263, 501-510
48. Wang, T. S. (1991) Annu. Rev. Biochem. 60, 513-552
49. Chang, L. M. S., and Bollum, F. J. (1972) Biochemistry 11, 1264-1272
50. Echols, H., and Goodman, M. F. (1990) Mutat. Res. 236, 301-311
51. Szekeres, E. S., Woodgate, R., and Lawrence, C. W. (1996) J. Bacteriol. 178, 2559-2563
52. Nelson, J. R., Lawrence, C. W., and Hinkle, D. C. (1996) Nature 382, 729-731