Unraveling the mechanism of a potent transcriptional activator

Journal of Biological Chemistry

Volumn 280, Issue 33, 2005, Pages 29689-29698

  Lu, Zhen ^a   Rowe, Steven P ^a,b   Brennan, Brian B ^b   Davis, Sarah E ^a   Metzler, Renee E ^a   Nau, Johnathan J ^a   Majmudar, Chinmay Y ^b   Mapp, Anna K ^b   Ansari, Aseem Z ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATION ANALYSIS; BINDING ENERGY; DNA;

ARTIFICIAL TRANSCRIPTION FACTORS (ATF); BINDING DOMAIN; NATURAL ACTIVATION; TRANSCRIPTIONAL MACHINERY;

BIOCHEMISTRY;

REGULATOR PROTEIN; SOLVENT; TRANSCRIPTION FACTOR;

ARTICLE; DNA TRANSCRIPTION; GENE TARGETING; IN VIVO STUDY; MOLECULAR INTERACTION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; TRANSCRIPTION REGULATION;

AMINO ACID SEQUENCE; BINDING SITES; MOLECULAR SEQUENCE DATA; SACCHAROMYCES CEREVISIAE PROTEINS; TRANS-ACTIVATORS; TRANSCRIPTION FACTORS;

EID: 23844525852     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M504895200     Document Type: Article

References (62)

1. Darnell, J. E., Jr. (2002) Nat. Rev. Cancer 2, 740-749
2. Pandolfi, P. P. (2001) Oncogens 20, 3116-3127
3. Duncan, S. A., Navas, M. A., Dufort, D., Rossant, J. & Stoffel, M. (1998) Science 281, 692-695
4. Ansari, A. Z. & Mapp, A. K. (2002) Curr. Opin. Chem. Biol. 6, 765-772
5. Mapp, A. K. (2003) Org. Biomol. Chem. 1, 2217-2220
6. Ptashne, M. & Gann, A. (2001) Genes & Signals, Cold Spring Harbor Laboratory Press, New York
7. Ansari, A. Z. (2001) Curr. Org. Chem. 5, 903-921
8. Mapp, A. K., Ansari, A. Z., Ptashne, M. & Dervan, P. B. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 3930-3935
9. Beerli, R. R., Dreier, B. & Barbas, C. F. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 1495-1500
10. Kuznetsova, S., Ait-Si-Ali, S., Nagibneva, I., Troalen, F., Le Villain, J. P., Harel-Bellan, A. & Svinarchuk, F. (1999) Nucleic Acids Res. 27, 3995-4000
11. Liu, B., Han, Y., Ferdous, A., Corey, D. R. & Kodadek, T. (2003) Chem. Biol. 10, 909-916
12. Beerli, R. R. & Barbas, C. F. (2002) Nat. Biotechnol. 20, 135-141
13. Gerber, H. P., Seipel, K., Georgiev, O., Hofferer, M., Hug, M., Rusconi, S. & Schaffner, W. (1994) Science 263, 808-811
14. Blair, W. S., Bogerd, H. P., Madore, S. J. & Cullen, B. R. (1994) Mol. Cell. Biol. 14, 7226-7234
15. Ansari, A. Z., Mapp, A. K., Nguyen, D. H. & Dervan, P. B. (2001) Chem. Biol. 8, 583-592
16. Nyanguile, O., Uesugi, M., Austin, D. J. & Verdine, G. L. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 13402-13406
17. Ma, J. & Ptashne, M. (1987) Cell 51, 113-119
18. Giniger, E. & Ptashne, M. (1987) Nature 330, 670-672
19. Lu, X. Y., Ansari, A. Z. & Ptashne, M. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 1988-1992
20. Lu, Z., Ansari, A. Z., Lu, X. Y., Ogirala, A. & Ptashne, M. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 8591-8596
21. Frangioni, J. V., LaRiccia, L. M., Cantley, L. C. & Montminy, M. R. (2000) Nat. Biotechnol. 18, 1080-1085
22. Han, Y. & Kodadek, T. (2000) J. Biol. Chem. 275, 14979-14984
23. Wu, Z., Belanger, G., Brennan, B. B., Lum, J. K., Minter, A. R., Rowe, S. P., Plachetka, A., Majmudar, C. Y. & Mapp, A. K. (2003) J. Am. Chem. Soc. 125, 12390-12391
24. Sengupta, D. J., Wickens, M. & Fields, S. (1999) RNA 5, 596-601
25. Saha, S., Ansari, A. Z., Jarrell, K. A. & Ptashne, M. (2003) Nucleic Acids Res. 31, 1565-1570
26. Buskirk, A. R., Kehayova, P. D., Landrigan, A. & Liu, D. R. (2003) Chem. Biol. 10, 533-540
27. Barberis, A. Pearlberg, J., Simkovich, N., Farrell, S., Reinagel, P., Bamdad, C., Sigal, G. & Ptashne, M. (1995) Cell 81, 359-368
28. Hidalgo, P., Ansari, A. Z., Schmidt, P., Hare, B., Simkovich, N., Farrell, S., Shin, E. J., Ptashne, M. & Wagner, G. (2001) Genes Dev. 15, 1007-1020
29. Himmelfarb, H. J., Pearlberg, J., Last, D. H. & Ptashne, M. (1990) Cell 63, 1299-1309
30. Jeong, C. J., Yang, S.-H., Xie, Y., Zhang, L., Johnston, S. A. & Kodadek, T. (2001) Biochemistry 40, 9421-9427
31. Lee, Y. C., Park, J. M., Min, S., Han, S. J. & Kim, Y. J. (1999) Mol. Cell. Biol. 19, 2967-2976
32. Park, J. M., Kim, H.-S., Han, S. J., Hwang, M.-S., Lee, Y. C. & Kim, Y.-J. (2000) Mol. Cell. Biol. 20, 8709-8719
33. Kim, Y. J., Bjorklund, S., Li, Y., Sayre, M. H. & Kornberg, R. D. (1994) Cell 77, 599-608
34. Koleske, A. J. & Young, R. A. (1994) Nature 368, 466-469
35. Lee, T. I. & Young, R. A. (2000) Annu. Rev. Genet. 34, 77-137
36. Myers, L. C. & Kornberg, R. D. (2000) Annu. Rev. Biochem. 69, 729-749
37. Ansari, A. Z., Koh, S. S., Zaman, Z., Bongards, C., Lehming, N., Young, R. A. & Ptashne, M. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 14706-14709
38. Dotson, M. R., Yuan, C. X., Roeder, R. G., Myers, L. C., Gustafsson, C. M., Li, Y., Kornberg, R. D. & Asturias, F. J. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 14307-14310
39. Davis, J. A., Takagi, Y., Kornberg, R. D. & Asturias, F. A. (2002) Mol. Cell 10, 409-415
40. Liu, Q., Krzewska, J., Liberek, K. & Craig, E. A. (2001) J. Biol. Chem. 276, 6112-6118
41. Kussie, P. H., Gorina, S., Marechal, V., Elenbaas, B., Moreau, J., Levine, A. J. & Pavletich, N. P. (1996) Science 274, 948-953
42. Lee, C., Chang, J. H., Lee, H. S. & Cho, Y. (2002) Genes Dev. 16, 3199-3212
43. Ansari, A. Z., Reece, R. J. & Ptashne, M. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 13543-13548
44. Sil, A. K., Alam, S., Xin, P., Ma, L., Morgan, M., Lebo, C., Woods, M. & Hopper, J. (1999) Mol. Cell. Biol. 19, 7828-7840
45. Yano, K. & Fukasawa, T. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 1721-1726
46. Zenke, F. T., Engles, R.. Vollenbroich, V., Meyer, J., Hollenberg, C. P. & Breunig, K. D., (1996) Science 272, 1662-1665
47. Platt, A. & Reece, R. J. (1998) EMBO J. 17, 4086-4091
48. Lohr, D., Venkov, P. & Zlatnova, J. (1995) FASEB J. 9, 777-787
49. Sze, J. Y., Woontner, M., Jaehning, J. A. & Kohlhaw, G. B. (1992) Science 258, 1143-1145
50. des Etages, S. G., Saxena, D., Huang, H. L., Falvey, D. A., Barber, D. & Brandriss, M. C. (2001) Mol. Microbiol. 40, 890-899
51. Sellick, C. A. & Reece, R. J. (2003) EMBO J. 22, 5147-5153
52. Wang, D., Zheng, F., Holmberg, S. & Kohlhaw, G. B. (1999) J. Biol. Chem. 274, 19017-19024
53. des Etages, S. G., Falvey, D. A., Reece, R. J. & Brandriss, M. C. (1996) Genetics 142, 1069-1082
54. Horwich, A. L., Weber-Ban, E. U. & Finley, D. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 11033-11040
55. Lipford, J. R. & Deshaies, R. J. (2003) Nat. Cell Biol. 5, 845-850
56. Muratani, M. & Tansey, W. P. (2003) Nat. Rev. Mol. Cell. Biol. 4, 192-201
57. Farrell, S., Simkovich, N., Wu, Y., Barberis, A. & Ptashne, M. (1996) Genes Dev. 10, 2359-2367
58. Shin, E. J. (1997) Honors Thesis in Biology, Ph.D. thesis, Harvard University, Cambridge, MA
59. Marmorstein, R., Carey, M., Ptashne, M. & Harrison, S. C. (1992) Nature 356, 408-414
60. Adams, A., Gottschling, D. E., Kaiser, C. A. & Stearns, T. (1997) Methods in Yeast Genetics, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
61. Chan, W. C. & White, P. D. (2000) Fmoc Solid-phase Peptide Synthesis: A Practical Approach, Oxford University Press, New York
62. Kim, M., Saito, K., Furusaki, S., Sato, T., Sugo, T. & Ishigaki, I. (1991) J. Chromatogr. 585, 45-51