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6 Krishnamurthy P, Parlow M, Zitzer JB, Vakil NB, Mobley HLT, Levy M, Phadnis SH, Dunn BE: Helicobacter pylori containing only cytoplasmic urease is susceptible to acid. Infect Immun 1998, 66:5060-5066. The authors investigate the role of surface-exposed urease in acid tolerance.
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7 Scott DR, Weeks D, Hong C, Postius S, Melchers K, Sachs G: The role of internal urease in acid resistance and Helicobacter pylori. Gastroenterology 1998, 114:58-70. The authors hypothesize that the pH optima of surface-exposed and cytoplasmic urease makes it more likely that internal urease protects H. pylori against exposure to acid.
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8 McGee DJ, May CA, Garner RM, Himpsl JM, Mobley HLT: Isolation of Helicobacter pylori genes that modulate urease activity. J Bacteriol 1999, 181:2477-2484. A novel screening system is used to identify H. pylori gene bank clones that increase or decrease urease activity when expressed in an E. coli model system.
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Helicobacter pylori cadA encodes an essential Cd(II)-Zn(II)-Co(II) resistance factor influencing urease activity
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9 Hermann L, Schwan D, Garner R, Mobley HLT, Haas R, Schäfer KP, Melchers K: Helicobacter pylori cadA encodes an essential Cd(II)-Zn(II)-Co(II) resistance factor influencing urease activity. Mol Microbiol 1999, 33:524-536. An ATP-driven ion pump exports toxic metal ion that may diminish urease activity.
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10 Skouloubris S, Thiberge J-M, Labigne A, De Reuse H: The Helicobacter pylori Urel protein is not involved in urease activity but is essential for bacterial survival in vivo. Infect Immun 1998, 66:4517-4521. In this study a possible function of Urel, a protein encoded by the H. pylori urease gene cluster, but rarely in other bacterial urease clusters, is proposed.
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11 Kobayashi I, Muraoka H, Saika T, Nishida M, Suzuki J, Mine T: Emergence of urease-negative strains of Helicobacter pylori from patients with chronic gastritis or peptic ulcer. 99th General Meeting, American Society for Microbiology, 1999.
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13 Harris PR, Ernst PB, Kawabata S, Kiyono H, Graham MF, Smith PD: Recombinant Helicobacter pylori urease activates primary mucosal macrophages. J Infect Dis 1998, 178:1516-1520.
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Conserved residues and motifs in the NixA protein of Helicobacter pylori are critical for the high affinity transport of nickel ions
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15 Fulkerson JF, Jr, Garner RM, Mobley HLT: Conserved residues and motifs in the NixA protein of Helicobacter pylori are critical for the high affinity transport of nickel ions. J Biol Chem 1998, 273:235-241. Amino acid residues involved in NixA-mediated nickel ion uptake are identified by site-directed mutagenesis.
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16 Mobley HLT, Garner RM, Chippendale GR, Gilbert JV, Kane AV, Plaut AG: Role of Hpn and NixA of Helicobacter pylori in susceptibility and resistance to bismuth and other metal ions. Helicobacter 1999, 4:162-169.
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17 Spohn G, Scarlato V: Motility of Helicobacter pylori is coordinately regulated by the transcriptional activator FIgR and NtrC homolog. J Bacteriol 1999, 181:593-599. This is a sophisticated promoter analysis of flagellin genes in H. pylori.
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Cloning and allelic exchange mutagenesis of two flagellin genes of Helicobacter felis
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19 Josenhans C, Ferrero RL, Labigne A, Suerbaum S: Cloning and allelic exchange mutagenesis of two flagellin genes of Helicobacter felis. Mol Microbiol 1999, 33:350-362. This is the first report of allelic exchange mutagenesis in H. felis.
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20 Guruge JL, Falk PG, Lorenz RG, Dans M, Wirth H-P, Blaser MJ, Berg DE, Gordon JI: Epithelial attachment alters the outcome of Helicobacter pylori infection. Proc Natl Acad Sci U S A 1998, 95:3925-3930. Receptors for H. pylori were expressed in transgenic mice. Adherence of H. pylori results in inflammation and other features of the natural infection in humans.
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21
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Helicobacter pylori attaches to NeuAcα2,3Galβ1,4 glycoconjugates produced in the stomach of transgenic mice lacking parietal cells
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21 Snyder AJ, Guruge JL, Li Q, Hu Y, Oleksiewicz CM, Lorenz RG, Karam SM, Falk PG, Gordon JI: Helicobacter pylori attaches to NeuAcα2,3Galβ1,4 glycoconjugates produced in the stomach of transgenic mice lacking parietal cells. Mol Cell 1999, 3:263-274. The use of the transgenic mouse gives insight into the pathogenesis of chronic H. pylori infection in which parietal cell ablation has occurred.
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23 Odenbreit S, Till M, Hofreuter D, Faller G, Haas R: Genetic and functional characterization of the alpAB gene locus essential for the adhesion of Helicobacter pylori to human gastric tissue. Mol Microbiol 1999, 31:1537-1548. Two outer membrane proteins of identical size are identified as adhesins.
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25 Papini E, Satin B, Norais N, de Bernard M, Telford JL, Rappuoli R, Montecucco C: Selective increase of the permeability of polarized epithelial cell monolayers by the Helicobacter pylori vacuolating toxin. J Clin Invest 1998, 102:813-820.
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26 Tombola F, Carlesso C, Szabò I, de Bernard M, Reyrat JM, Telford JL, Rappuoli R, Montecucco C, Papini E, Zoratti M: Helicobacter pylori vacuolating cytotoxin forms anion-selective channels in planar lipid bilayers: possible implications for the mechanisms of cellular vacuolation. Biophys J 1999, 76:1401-1409.
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Binding of the Helicobacter pylori vacuolating cytotoxin to target cells
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27 Massari P, Manetti R, Burroni D, Nuti S, Norais N, Rappuoli R, Telford JL: Binding of the Helicobacter pylori vacuolating cytotoxin to target cells. Infect Immun 1998, 66:3981-3984.
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Identification of the Helicobacter pylori VacA toxin domain active in the cell cytosol
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28 de Bernard M, Burroni D, Papini E, Rappuoli R, Telford J, Montecucco C: Identification of the Helicobacter pylori VacA toxin domain active in the cell cytosol. Infect Immun 1998, 66:6014-6016.
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Identification of the minimal intracellular vacuolating domain of the Helicobacter pylori vacuolating toxin
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29 Ye D, Willhite DC, Blanke SR: Identification of the minimal intracellular vacuolating domain of the Helicobacter pylori vacuolating toxin. J Biol Chem 1999, 274:9277-9282. Innovative use of Gfp, complementation, and transfection is used to identify the minimal VacA polypeptide necessary for cytotoxic activity.
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30 Pagliaccia C, de Bernard M, Lupetti P, Ji X, Burroni D, Cover TL, Papini E, Rappuoli R, Telford JL, Reyrat J-M: The m2 form of the Helicobacter pylori cytotoxin has cell type-specific vacuolating activity. Proc Natl Acad Sci U S A 1998, 95:10212-10217. Using a variety of cell lines, H. pylori strains previously identified as Tox(-) are shown to express vacuolating cytotoxin activity.
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31 Ito Y, Azuma T, Ito S, Suto H, Miyaji H, Yamazaki Y, Kohli Y, Kuriyama M: Full-length sequence analysis of the vacA gene from cytotoxic and noncytotoxic Helicobacter pylori. J Infect Dis 1998, 178:1391-1398.
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32 Forsyth MH, Atherton JC, Blaser MJ, Cover TL: Heterogeneity in levels of vacuolating cytotoxin gene (vacA) transcription among Helicobacter pylori strains. Infect Immun 1998, 66:3088-3094.
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33 Forsyth MH, Cover TL: Mutational analysis of the vacA promoter provides insight into gene transcription in Helicobacter pylori. J Bacteriol 1999, 181:2261-2266.
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35 Li SD, Kersulyte D, Lindley IJD, Neelam B, Berg DE, Crabtree JE: Multiple genes in the left half of the cag pathogenicity island of Helicobacter pylori are required for tyrosine kinase-dependent transcription of interleukin-8 in gastric epithelial cells. Infect Immun 1999, 67:3893-3899.
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36 Spohn G, Beier D, Rappuoli R, Scarlato V: Transcriptional analysis of the divergent cagAB genes encoded by the pathogenicity island of Helicobacter pylori. Mol Microbiol 1997, 26:361-372.
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37 Maeda S, Yoshida H, Ikenoue T, Ogura K, Kanai F, Kato N, Shiratori Y, Omata M: Structure of the cag pathogenicity island in Japanese Helicobacter pylori isolates. Gut 1999, 44:336-341.
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Clinical outcome after infection with Helicobacter pylori does not appear to be reliably predicted by the presence of any of the genes of the cag pathogenicity island
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38 Jenks PJ, Mégraud F, Labigne A: Clinical outcome after infection with Helicobacter pylori does not appear to be reliably predicted by the presence of any of the genes of the cag pathogenicity island. Gut 1998, 43:752-758. This is a careful analysis of the completeness of the cag PAI in cagA+ H. pylori strains.
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40 Rugge M, Busatto G, Cassaro M, Shiao Y-H, Russo V, Leandro G, Avellini C, Fabiano A, Sidoni A, Covacci A: Patients younger than 40 years with gastric carcinoma: Helicobacter pylori genotype and associated gastritis phenotype. Cancer 1999, 85:2506-2511.
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52 Alm R, Ling LS, Moir DT, King BL, Brown ED, Doig PC, Smith DR, et al.: Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. Nature 1999, 397:176-180. This is a landmark paper both within and outside of the H. pylori field. This also marked the first species to have genomes of two strains completely sequenced and allowed an unprecedented detailed comparison between two strains (see [64••,65••]). A must-read article.
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Nature
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54 Bijlsma JJE, Vandenbroucke-Grauls CMJE, Phadnis SH, Kusters JG: Identification of virulence genes of Helicobacter pylori by random insertion mutagenesis. Infect Immun 1999, 67:2433-2440. The authors developed a simple, straightforward method of mutagenizing H. pylori and identified a new mutant deficient in urease activity that mapped outside the urease gene cluster and four nonmotile mutants that were in loci not previously thought to be involved in motility.
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55
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Abstract HG17
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55 Dorrell N, Winzeler E, Foynes S, Stabler RA, Allan E, Liang H, Davis RW, et al.: Simultaneous analysis of Helicobacter pylori mutants using unique DNA tags and a high-density oligonucleotide array. 10th International Workshop on Campylobacter, Helicobacter, and Related Organisms 1999, Abstract HG17. Although not yet published in a peer-reviewed journal, the use of high-density oligonucleotide arrays to study H. pylori genes en masse will undoubtedly be an exciting, cutting-edge technique that quickly generates voluminous data both in vitro and in vivo.
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10th International Workshop on Campylobacter, Helicobacter, and Related Organisms
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Dorrell, N.1
Winzeler, E.2
Foynes, S.3
Stabler, R.A.4
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56 Guo BP, Mekalanos JJ: Rapid, directed transposon mutagenesis of Helicobacter pylori. 10th International Workshop on Campylobacter, Helicobacter, and Related Organisms 1999, Abstract HG7.
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10th International Workshop on Campylobacter, Helicobacter, and Related Organisms
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Guo, B.P.1
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58
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Green fluorescent protein as a novel marker and reporter system in Helicobacter sp
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58 Josenhans C, Friedrich S, Suerbaum S: Green fluorescent protein as a novel marker and reporter system in Helicobacter sp. FEMS Microbiol Lett 1998, 161:262-273. First application of green fluorescent protein in H. pylori.
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Josenhans, C.1
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59
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Transposon mutagenesis of Helicobacter pylori strain 26695
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59 McGee DJ, Himpsl JM, Mobley HLT: Transposon mutagenesis of Helicobacter pylori strain 26695. 10th International Workshop on Campylobacter, Helicobacter, and Related Organisms 1999, Abstract HG10.
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McGee, D.J.1
Himpsl, J.M.2
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Optimized BlaM-transposon shuttle mutagenesis of Helicobacter pylori allows the identification of novel genetic loci involved in bacterial virulence
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60 Odenbreit S, Till M, Haas R: Optimized BlaM-transposon shuttle mutagenesis of Helicobacter pylori allows the identification of novel genetic loci involved in bacterial virulence. Mol Microbiol 1996, 20:361-373.
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pH-dependent expression of proteins in Helicobacter pylori, identified by two-dimensional gel electrophoresis
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61 Slonczewski JL, McGee DJ, Phillips J, Mobley HLT: pH-dependent expression of proteins in Helicobacter pylori, identified by two-dimensional gel electrophoresis. 10th International Workshop on Campylobacter, Helicobacter, and Related Organisms 1999, Abstract HG9.
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Slonczewski, J.L.1
McGee, D.J.2
Phillips, J.3
Mobley, H.L.T.4
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62
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Identification of potential diagnostic and vaccine candidates of Helicobacter pylori by "proteome" technologies
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62 McAtee CP, Fry KE, Berg DE: Identification of potential diagnostic and vaccine candidates of Helicobacter pylori by "proteome" technologies. Helicobacter 1998, 3:163-169. First application of two-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis analysis to H. pylori. The authors used sera from H. pylori - infected patients to identify H. pylori proteins expressed in vivo.
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McAtee, C.P.1
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63 Covacci A, Rappuoli R: Helicobacter pylori: molecular evolution of a bacterial quasi-species. Curr Opin Microbiol 1998, 1:96-102.
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64 Doig P, de Jonge BL, Alm RA, Brown ED, Uria-Nickelsen M, Noonan B, Mills SD, et al.: Helicobacter pylori physiology predicted from genomic comparison of two strains. Microbiol Mol Biol Rev 1999, 63:675-707. This paper, along with Marais et al. [65••], are outstanding review articles detailing similarities and differences between the two completed genomes of H. pylori, with focus on metabolism, physiology, and genetics. They are must-read articles for H. pylori researchers.
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Microbiol Mol Biol Rev
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Doig, P.1
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65 Marais A, Mendz GL, Hazell SL, Mégraud F: Metabolism and genetics of Helicobacter pylori: the genome era. Microbiol Mol Biol Rev 1999, 63:642-674. See annotation for Doig et al. [64••].
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Marais, A.1
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67
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67 Suerbaum S, Achtman M: Evolution of Helicobacter pylori: the role of recombination. Trends Microbiol 1999, 7:182-184.
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Trends Microbiol
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68
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Recombination and clonal groupings within Helicobacter pylori from different geographical regions
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68 Achtman M, Azuma T, Berg DE, Ito Y, Morelli G, Pan Z-J, Suerbaum S, et al.: Recombination and clonal groupings within Helicobacter pylori from different geographical regions. Mol Microbiol 1999, 32:459-470. This is an elegant extension of the study by Suerbaum et at. [71••]. Using the powerful technique of multilocus sequence typing, this study revealed that different strains of H. pylori can have weakly clonal groupings within a largely panmictic population structure.
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Mol Microbiol
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Achtman, M.1
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69
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PCR-based subtractive hybridization and differences in gene content among strains of Helicobacter pylori
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69 Akopyants NS, Fradkov A, Diatchenko L, Hill JE, Siebert PD, Lukyanov SA, Sverdlov ED, et al.: PCR-based subtractive hybridization and differences in gene content among strains of Helicobacter pylori. Proc Natl Acad Sci U S A 1998, 95:13108-13113. This is beautiful work in which the authors dramatically improved the technique of subtractive hybridization (now commercially available) and applied it to H. pylori and discovered 18 unique genes (7 had homology to restriction enzymes) between a test strain and the genome strain 26695.
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Proc Natl Acad Sci U S A
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70 Kersulyte D, Chalkauskas H, Berg DE: Emergence of recombinant strains of Helicobacter pylori during human infection. Mol Microbiol 1999, 31:31-43. This gorgeous study describes the first example of in vivo H. pylori recombination between strains. Recombination occurred at a very high frequency.
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Mol Microbiol
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Kersulyte, D.1
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Free recombination within Helicobacter pylori
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71 Suerbaum S, Maynard Smith J, Bapumia K, Morelli G, Smith NH, Kunstmann E, Dyrek I, et al.: Free recombination within Helicobacter pylori. Proc Natl Acad Sci U S A 1998, 95:12619-12624. The authors provide convincing evidence that H. pylori population structure is panmictic and that more recombination occurs in H. pylori than in any other known organism. Over the short term within a patient, however, H. pylori is clonal. See also [68••].
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72 Chevalier C, Thiberge J-M, Ferrero RL, Labigne A: Essential role of Helicobacter pylori γ-glutamyltranspeptidase for the colonization of the gastric mucosa of mice. Mol Microbiol 1999, 31:1359-1372. This is an elegant study in which the authors cloned the δ-glutamyltranspeptidase gene, purified the protein, raised antisera, investigated other Helicobacters for presence of the gene and enzyme activity, and conducted a large animal study. The enzyme clearly plays a role in allowing H. pylori to colonize mice.
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A conventional beagle dog model for acute and chronic infection with Helicobacter pylori
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76 Rossi G, Rossi M, Vitali CG, Fortuna D, Burroni D, Pancotto L, Capecchi S, et al.: A conventional Beagle dog model for acute and chronic infection with Helicobacter pylori. Infect Immun 1999, 67:3112-3120. This is an outstanding study showing that H. pylori can infect conventional Beagle dogs in a manner that very closely mimics chronic disease in humans.
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Rossi, G.1
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78 Lindholm C, Quiding-Järbrink M, Lönroth H, Hamlet A, Svennerholm AM: Local cytokine response in Helicobacter pylori-infected patients. Infect Immun 1998, 66:5964-5971.
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79
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79 Sommer F, Faller G, Konturek P, Kirchner T, Hahn EG, Zeus J, Rollinghoff M, et al.: Antrum-and corpus mucosa-infiltrating CD4(+) lymphocytes in Helicobacter pylori gastritis display a Th1 phenotype. Infect Immun 1998, 66:5543-5546.
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Infect Immun
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Sommer, F.1
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80 Moss SF: Helicobacter pylori and apoptosis. Yale J Biol Med 1998, 71:53-61.
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81 Fan X, Crowe SE, Behar S, Gunasena H, Ye G, Haeberle H, Van Houten N, et al.: The effect of class II major histocompatibility complex expression on adherence of Helicobacter pylori and induction of apoptosis in gastric epithelial cells: a mechanism for T helper cell type 1-mediated damage. J Exp Med 1998, 187:1659-1669. This is an elegant study that bridges several areas of H. pylori research: Th1 immune response with identification of MHC class II as a receptor for H. pylori involved in apoptosis.
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J Exp Med
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82 Houghton J, Korah RM, Condon MR, Kim KH: Apoptosis in Helicobacter pylori-associated gastric and duodenal ulcer disease is mediated via the Fas antigen pathway. Dig Dis Sci 1999, 44:465-473.
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