-
2
-
-
84934442185
-
Targeting the adaptive molecular landscape of castration-resistant prostate cancer
-
Wyatt AW and Gleave ME. Targeting the adaptive molecular landscape of castration-resistant prostate cancer. EMBO molecular medicine. 2015; 7:878-894.
-
(2015)
EMBO molecular medicine
, vol.7
, pp. 878-894
-
-
Wyatt, A.W.1
Gleave, M.E.2
-
3
-
-
84896705671
-
Maintaining and reprogramming genomic androgen receptor activity in prostate cancer
-
Mills IG. Maintaining and reprogramming genomic androgen receptor activity in prostate cancer. Nat Rev Cancer. 2014; 14:187-198.
-
(2014)
Nat Rev Cancer
, vol.14
, pp. 187-198
-
-
Mills, I.G.1
-
4
-
-
84936950342
-
A profile of enzalutamide for the treatment of advanced castration resistant prostate cancer
-
Greasley R, Khabazhaitajer M and Rosario DJ. A profile of enzalutamide for the treatment of advanced castration resistant prostate cancer. Cancer Manag Res. 2015; 7:153-164.
-
(2015)
Cancer Manag Res
, vol.7
, pp. 153-164
-
-
Greasley, R.1
Khabazhaitajer, M.2
Rosario, D.J.3
-
5
-
-
84872391385
-
The androgen receptor induces a distinct transcriptional program in castration-resistant prostate cancer in man
-
Sharma NL, Massie CE, Ramos-Montoya A, Zecchini V, Scott HE, Lamb AD, MacArthur S, Stark R, Warren AY, Mills IG and Neal DE. The androgen receptor induces a distinct transcriptional program in castration-resistant prostate cancer in man. Cancer Cell. 2013; 23:35-47.
-
(2013)
Cancer Cell
, vol.23
, pp. 35-47
-
-
Sharma, N.L.1
Massie, C.E.2
Ramos-Montoya, A.3
Zecchini, V.4
Scott, H.E.5
Lamb, A.D.6
MacArthur, S.7
Stark, R.8
Warren, A.Y.9
Mills, I.G.10
Neal, D.E.11
-
6
-
-
67650758019
-
Androgen receptor regulates a distinct transcription program in androgen-independent prostate cancer
-
Wang Q, Li W, Zhang Y, Yuan X, Xu K, Yu J, Chen Z, Beroukhim R, Wang H, Lupien M, Wu T, Regan MM, Meyer CA, et al. Androgen receptor regulates a distinct transcription program in androgen-independent prostate cancer. Cell. 2009; 138:245-256.
-
(2009)
Cell
, vol.138
, pp. 245-256
-
-
Wang, Q.1
Li, W.2
Zhang, Y.3
Yuan, X.4
Xu, K.5
Yu, J.6
Chen, Z.7
Beroukhim, R.8
Wang, H.9
Lupien, M.10
Wu, T.11
Regan, M.M.12
Meyer, C.A.13
-
7
-
-
84870591476
-
Persistent androgen receptor-mediated transcription in castration-resistant prostate cancer under androgen-deprived conditions
-
Decker KF, Zheng D, He Y, Bowman T, Edwards JR and Jia L. Persistent androgen receptor-mediated transcription in castration-resistant prostate cancer under androgen-deprived conditions. Nucleic Acids Res. 2012; 40:10765-10779.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 10765-10779
-
-
Decker, K.F.1
Zheng, D.2
He, Y.3
Bowman, T.4
Edwards, J.R.5
Jia, L.6
-
8
-
-
77952105685
-
Antitumour activity of MDV3100 in castration-resistant prostate cancer: a phase 1-2 study
-
Scher HI, Beer TM, Higano CS, Anand A, Taplin ME, Efstathiou E, Rathkopf D, Shelkey J, Yu EY, Alumkal J, Hung D, Hirmand M, Seely L, et al. Antitumour activity of MDV3100 in castration-resistant prostate cancer: a phase 1-2 study. Lancet. 2010; 375:1437-1446.
-
(2010)
Lancet
, vol.375
, pp. 1437-1446
-
-
Scher, H.I.1
Beer, T.M.2
Higano, C.S.3
Anand, A.4
Taplin, M.E.5
Efstathiou, E.6
Rathkopf, D.7
Shelkey, J.8
Yu, E.Y.9
Alumkal, J.10
Hung, D.11
Hirmand, M.12
Seely, L.13
-
9
-
-
65649090203
-
Development of a second-generation antiandrogen for treatment of advanced prostate cancer
-
Tran C, Ouk S, Clegg NJ, Chen Y, Watson PA, Arora V, Wongvipat J, Smith-Jones PM, Yoo D, Kwon A, Wasielewska T, Welsbie D, Chen CD, et al. Development of a second-generation antiandrogen for treatment of advanced prostate cancer. Science. 2009; 324:787-790.
-
(2009)
Science
, vol.324
, pp. 787-790
-
-
Tran, C.1
Ouk, S.2
Clegg, N.J.3
Chen, Y.4
Watson, P.A.5
Arora, V.6
Wongvipat, J.7
Smith-Jones, P.M.8
Yoo, D.9
Kwon, A.10
Wasielewska, T.11
Welsbie, D.12
Chen, C.D.13
-
10
-
-
78649998496
-
Metabolic alterations and targeted therapies in prostate cancer
-
Flavin R, Zadra G and Loda M. Metabolic alterations and targeted therapies in prostate cancer. The Journal of pathology. 2011; 223:283-294.
-
(2011)
The Journal of pathology
, vol.223
, pp. 283-294
-
-
Flavin, R.1
Zadra, G.2
Loda, M.3
-
11
-
-
79960071366
-
The androgen receptor fuels prostate cancer by regulating central metabolism and biosynthesis
-
Massie CE, Lynch A, Ramos-Montoya A, Boren J, Stark R, Fazli L, Warren A, Scott H, Madhu B, Sharma N, Bon H, Zecchini V, Smith DM, et al. The androgen receptor fuels prostate cancer by regulating central metabolism and biosynthesis. Embo J. 2011; 30:2719-2733.
-
(2011)
Embo J
, vol.30
, pp. 2719-2733
-
-
Massie, C.E.1
Lynch, A.2
Ramos-Montoya, A.3
Boren, J.4
Stark, R.5
Fazli, L.6
Warren, A.7
Scott, H.8
Madhu, B.9
Sharma, N.10
Bon, H.11
Zecchini, V.12
Smith, D.M.13
-
12
-
-
84912002823
-
Metabolism and epigenetics: a link cancer cells exploit
-
Carrer A and Wellen KE. Metabolism and epigenetics: a link cancer cells exploit. Current opinion in biotechnology. 2014; 34C:23-29.
-
(2014)
Current opinion in biotechnology
, vol.34C
, pp. 23-29
-
-
Carrer, A.1
Wellen, K.E.2
-
13
-
-
84930589309
-
Acetyl Coenzyme A: A Central Metabolite and Second Messenger
-
Pietrocola F, Galluzzi L, Bravo-San Pedro JM, Madeo F and Kroemer G. Acetyl Coenzyme A: A Central Metabolite and Second Messenger. Cell Metab. 2015; 21:805-821.
-
(2015)
Cell Metab
, vol.21
, pp. 805-821
-
-
Pietrocola, F.1
Galluzzi, L.2
Bravo-San Pedro, J.M.3
Madeo, F.4
Kroemer, G.5
-
14
-
-
84904872156
-
The growing landscape of lysine acetylation links metabolism and cell signalling
-
Choudhary C, Weinert BT, Nishida Y, Verdin E and Mann M. The growing landscape of lysine acetylation links metabolism and cell signalling. Nat Rev Mol Cell Biol. 2014; 15:536-550.
-
(2014)
Nat Rev Mol Cell Biol
, vol.15
, pp. 536-550
-
-
Choudhary, C.1
Weinert, B.T.2
Nishida, Y.3
Verdin, E.4
Mann, M.5
-
15
-
-
66249105703
-
ATP-citrate lyase links cellular metabolism to histone acetylation
-
Wellen KE, Hatzivassiliou G, Sachdeva UM, Bui TV, Cross JR and Thompson CB. ATP-citrate lyase links cellular metabolism to histone acetylation. Science. 2009; 324:1076-1080.
-
(2009)
Science
, vol.324
, pp. 1076-1080
-
-
Wellen, K.E.1
Hatzivassiliou, G.2
Sachdeva, U.M.3
Bui, T.V.4
Cross, J.R.5
Thompson, C.B.6
-
16
-
-
84930225081
-
Integrative clinical genomics of advanced prostate cancer
-
Robinson D, Van Allen EM, Wu YM, Schultz N, Lonigro RJ, Mosquera JM, Montgomery B, Taplin ME, Pritchard CC, Attard G, Beltran H, Abida W, Bradley RK, et al. Integrative clinical genomics of advanced prostate cancer. Cell. 2015; 161:1215-1228.
-
(2015)
Cell
, vol.161
, pp. 1215-1228
-
-
Robinson, D.1
Van Allen, E.M.2
Wu, Y.M.3
Schultz, N.4
Lonigro, R.J.5
Mosquera, J.M.6
Montgomery, B.7
Taplin, M.E.8
Pritchard, C.C.9
Attard, G.10
Beltran, H.11
Abida, W.12
Bradley, R.K.13
-
17
-
-
84905816638
-
Aktdependent metabolic reprogramming regulates tumor cell histone acetylation
-
Lee JV, Carrer A, Shah S, Snyder NW, Wei S, Venneti S, Worth AJ, Yuan ZF, Lim HW, Liu S, Jackson E, Aiello NM, Haas NB, Rebbeck TR, Judkins A, Won KJ, et al. Aktdependent metabolic reprogramming regulates tumor cell histone acetylation. Cell Metab. 2014; 20:306-319.
-
(2014)
Cell Metab
, vol.20
, pp. 306-319
-
-
Lee, J.V.1
Carrer, A.2
Shah, S.3
Snyder, N.W.4
Wei, S.5
Venneti, S.6
Worth, A.J.7
Yuan, Z.F.8
Lim, H.W.9
Liu, S.10
Jackson, E.11
Aiello, N.M.12
Haas, N.B.13
Rebbeck, T.R.14
Judkins, A.15
Won, K.J.16
-
19
-
-
84888866083
-
Hooked on fat: the role of lipid synthesis in cancer metabolism and tumour development
-
Baenke F, Peck B, Miess H and Schulze A. Hooked on fat: the role of lipid synthesis in cancer metabolism and tumour development. Dis Model Mech. 2013; 6:1353-1363.
-
(2013)
Dis Model Mech
, vol.6
, pp. 1353-1363
-
-
Baenke, F.1
Peck, B.2
Miess, H.3
Schulze, A.4
-
20
-
-
26244464326
-
PKB/Akt induces transcription of enzymes involved in cholesterol and fatty acid biosynthesis via activation of SREBP
-
Porstmann T, Griffiths B, Chung YL, Delpuech O, Griffiths JR, Downward J and Schulze A. PKB/Akt induces transcription of enzymes involved in cholesterol and fatty acid biosynthesis via activation of SREBP. Oncogene. 2005; 24:6465-6481.
-
(2005)
Oncogene
, vol.24
, pp. 6465-6481
-
-
Porstmann, T.1
Griffiths, B.2
Chung, Y.L.3
Delpuech, O.4
Griffiths, J.R.5
Downward, J.6
Schulze, A.7
-
21
-
-
50049116472
-
SREBP activity is regulated by mTORC1 and contributes to Aktdependent cell growth
-
Porstmann T, Santos CR, Griffiths B, Cully M, Wu M, Leevers S, Griffiths JR, Chung YL and Schulze A. SREBP activity is regulated by mTORC1 and contributes to Aktdependent cell growth. Cell Metab. 2008; 8:224-236.
-
(2008)
Cell Metab
, vol.8
, pp. 224-236
-
-
Porstmann, T.1
Santos, C.R.2
Griffiths, B.3
Cully, M.4
Wu, M.5
Leevers, S.6
Griffiths, J.R.7
Chung, Y.L.8
Schulze, A.9
-
22
-
-
77955483125
-
Activation of a metabolic gene regulatory network downstream of mTOR complex 1
-
Duvel K, Yecies JL, Menon S, Raman P, Lipovsky AI, Souza AL, Triantafellow E, Ma Q, Gorski R, Cleaver S, Vander Heiden MG, MacKeigan JP, Finan PM, et al. Activation of a metabolic gene regulatory network downstream of mTOR complex 1. Mol Cell. 2010; 39:171-183.
-
(2010)
Mol Cell
, vol.39
, pp. 171-183
-
-
Duvel, K.1
Yecies, J.L.2
Menon, S.3
Raman, P.4
Lipovsky, A.I.5
Souza, A.L.6
Triantafellow, E.7
Ma, Q.8
Gorski, R.9
Cleaver, S.10
Vander Heiden, M.G.11
MacKeigan, J.P.12
Finan, P.M.13
-
23
-
-
1542615071
-
Dysregulation of sterol response element-binding proteins and downstream effectors in prostate cancer during progression to androgen independence
-
Ettinger SL, Sobel R, Whitmore TG, Akbari M, Bradley DR, Gleave ME and Nelson CC. Dysregulation of sterol response element-binding proteins and downstream effectors in prostate cancer during progression to androgen independence. Cancer Res. 2004; 64:2212-2221.
-
(2004)
Cancer Res
, vol.64
, pp. 2212-2221
-
-
Ettinger, S.L.1
Sobel, R.2
Whitmore, T.G.3
Akbari, M.4
Bradley, D.R.5
Gleave, M.E.6
Nelson, C.C.7
-
24
-
-
0030936232
-
Androgens stimulate fatty acid synthase in the human prostate cancer cell line LNCaP
-
Swinnen JV, Esquenet M, Goossens K, Heyns W and Verhoeven G. Androgens stimulate fatty acid synthase in the human prostate cancer cell line LNCaP. Cancer Res. 1997; 57:1086-1090.
-
(1997)
Cancer Res
, vol.57
, pp. 1086-1090
-
-
Swinnen, J.V.1
Esquenet, M.2
Goossens, K.3
Heyns, W.4
Verhoeven, G.5
-
25
-
-
0029743674
-
Androgens markedly stimulate the accumulation of neutral lipids in the human prostatic adenocarcinoma cell line LNCaP
-
Swinnen JV, Van Veldhoven PP, Esquenet M, Heyns W and Verhoeven G. Androgens markedly stimulate the accumulation of neutral lipids in the human prostatic adenocarcinoma cell line LNCaP. Endocrinology. 1996; 137:4468-4474.
-
(1996)
Endocrinology
, vol.137
, pp. 4468-4474
-
-
Swinnen, J.V.1
Van Veldhoven, P.P.2
Esquenet, M.3
Heyns, W.4
Verhoeven, G.5
-
26
-
-
34548580317
-
Chemical inhibition of acetyl-CoA carboxylase induces growth arrest and cytotoxicity selectively in cancer cells
-
Beckers A, Organe S, Timmermans L, Scheys K, Peeters A, Brusselmans K, Verhoeven G and Swinnen JV. Chemical inhibition of acetyl-CoA carboxylase induces growth arrest and cytotoxicity selectively in cancer cells. Cancer Res. 2007; 67:8180-8187.
-
(2007)
Cancer Res
, vol.67
, pp. 8180-8187
-
-
Beckers, A.1
Organe, S.2
Timmermans, L.3
Scheys, K.4
Peeters, A.5
Brusselmans, K.6
Verhoeven, G.7
Swinnen, J.V.8
-
27
-
-
12144286902
-
The isopeptidase USP2a regulates the stability of fatty acid synthase in prostate cancer
-
Graner E, Tang D, Rossi S, Baron A, Migita T, Weinstein LJ, Lechpammer M, Huesken D, Zimmermann J, Signoretti S and Loda M. The isopeptidase USP2a regulates the stability of fatty acid synthase in prostate cancer. Cancer Cell. 2004; 5:253-261.
-
(2004)
Cancer Cell
, vol.5
, pp. 253-261
-
-
Graner, E.1
Tang, D.2
Rossi, S.3
Baron, A.4
Migita, T.5
Weinstein, L.J.6
Lechpammer, M.7
Huesken, D.8
Zimmermann, J.9
Signoretti, S.10
Loda, M.11
-
28
-
-
1542720382
-
Orlistat is a novel inhibitor of fatty acid synthase with antitumor activity
-
Kridel SJ, Axelrod F, Rozenkrantz N and Smith JW. Orlistat is a novel inhibitor of fatty acid synthase with antitumor activity. Cancer Res. 2004; 64:2070-2075.
-
(2004)
Cancer Res
, vol.64
, pp. 2070-2075
-
-
Kridel, S.J.1
Axelrod, F.2
Rozenkrantz, N.3
Smith, J.W.4
-
29
-
-
26644441651
-
ATP citrate lyase inhibition can suppress tumor cell growth
-
Hatzivassiliou G, Zhao F, Bauer DE, Andreadis C, Shaw AN, Dhanak D, Hingorani SR, Tuveson DA and Thompson CB. ATP citrate lyase inhibition can suppress tumor cell growth. Cancer Cell. 2005; 8:311-321.
-
(2005)
Cancer Cell
, vol.8
, pp. 311-321
-
-
Hatzivassiliou, G.1
Zhao, F.2
Bauer, D.E.3
Andreadis, C.4
Shaw, A.N.5
Dhanak, D.6
Hingorani, S.R.7
Tuveson, D.A.8
Thompson, C.B.9
-
30
-
-
84901032452
-
Inactivation of ATP citrate lyase by Cucurbitacin B: A bioactive compound from cucumber, inhibits prostate cancer growth
-
Gao Y, Islam MS, Tian J, Lui VW and Xiao D. Inactivation of ATP citrate lyase by Cucurbitacin B: A bioactive compound from cucumber, inhibits prostate cancer growth. Cancer Lett. 2014; 349:15-25.
-
(2014)
Cancer Lett
, vol.349
, pp. 15-25
-
-
Gao, Y.1
Islam, M.S.2
Tian, J.3
Lui, V.W.4
Xiao, D.5
-
31
-
-
84858782079
-
AMPK: a nutrient and energy sensor that maintains energy homeostasis
-
Hardie DG, Ross FA and Hawley SA. AMPK: a nutrient and energy sensor that maintains energy homeostasis. Nat Rev Mol Cell Biol. 2012; 13:251-262.
-
(2012)
Nat Rev Mol Cell Biol
, vol.13
, pp. 251-262
-
-
Hardie, D.G.1
Ross, F.A.2
Hawley, S.A.3
-
32
-
-
84898601973
-
A novel direct activator of AMPK inhibits prostate cancer growth by blocking lipogenesis
-
Zadra G, Photopoulos C, Tyekucheva S, Heidari P, Weng QP, Fedele G, Liu H, Scaglia N, Priolo C, Sicinska E, Mahmood U, Signoretti S, Birnberg N and Loda M. A novel direct activator of AMPK inhibits prostate cancer growth by blocking lipogenesis. EMBO molecular medicine. 2014; 6:519-538.
-
(2014)
EMBO molecular medicine
, vol.6
, pp. 519-538
-
-
Zadra, G.1
Photopoulos, C.2
Tyekucheva, S.3
Heidari, P.4
Weng, Q.P.5
Fedele, G.6
Liu, H.7
Scaglia, N.8
Priolo, C.9
Sicinska, E.10
Mahmood, U.11
Signoretti, S.12
Birnberg, N.13
Loda, M.14
-
33
-
-
84937134138
-
Salicylate activates AMPK and synergizes with metformin to reduce the survival of prostate and lung cancer cells ex vivo through inhibition of de novo lipogenesis
-
O'Brien AJ, Villani LA, Broadfield LA, Houde VP, Galic S, Blandino G, Kemp BE, Tsakaridis T, Muti P and Steinberg GR. Salicylate activates AMPK and synergizes with metformin to reduce the survival of prostate and lung cancer cells ex vivo through inhibition of de novo lipogenesis. Biochem J. 2015.
-
(2015)
Biochem J
-
-
O'Brien, A.J.1
Villani, L.A.2
Broadfield, L.A.3
Houde, V.P.4
Galic, S.5
Blandino, G.6
Kemp, B.E.7
Tsakaridis, T.8
Muti, P.9
Steinberg, G.R.10
-
34
-
-
3543025724
-
AMP-activated protein kinase activators can inhibit the growth of prostate cancer cells by multiple mechanisms
-
Xiang X, Saha AK, Wen R, Ruderman NB and Luo Z. AMP-activated protein kinase activators can inhibit the growth of prostate cancer cells by multiple mechanisms. Biochem Biophys Res Commun. 2004; 321:161-167.
-
(2004)
Biochem Biophys Res Commun
, vol.321
, pp. 161-167
-
-
Xiang, X.1
Saha, A.K.2
Wen, R.3
Ruderman, N.B.4
Luo, Z.5
-
35
-
-
84921348845
-
AMP-activated protein kinase (AMPK) as a potential therapeutic target independent of PI3K/Akt signaling in prostate cancer
-
Choudhury Y, Yang Z, Ahmad I, Nixon C, Salt IP and Leung HY. AMP-activated protein kinase (AMPK) as a potential therapeutic target independent of PI3K/Akt signaling in prostate cancer. Oncoscience. 2014; 1:446-456. doi: 10.18632/oncoscience.49.
-
(2014)
Oncoscience
, vol.1
, pp. 446-456
-
-
Choudhury, Y.1
Yang, Z.2
Ahmad, I.3
Nixon, C.4
Salt, I.P.5
Leung, H.Y.6
-
36
-
-
79955960768
-
Acetyl-CoA Induces Cell Growth and Proliferation by Promoting the Acetylation of Histones at Growth Genes
-
Cai L, Sutter BM, Li B and Tu BP. Acetyl-CoA Induces Cell Growth and Proliferation by Promoting the Acetylation of Histones at Growth Genes. Mol Cell. 2011; 42:426-437.
-
(2011)
Mol Cell
, vol.42
, pp. 426-437
-
-
Cai, L.1
Sutter, B.M.2
Li, B.3
Tu, B.P.4
-
37
-
-
84876891033
-
Acetyl-CoA induces transcription of the key G1 cyclin CLN3 to promote entry into the cell division cycle in Saccharomyces cerevisiae
-
Shi L and Tu BP. Acetyl-CoA induces transcription of the key G1 cyclin CLN3 to promote entry into the cell division cycle in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2013; 110:7318-7323.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 7318-7323
-
-
Shi, L.1
Tu, B.P.2
-
38
-
-
84870389262
-
The Warburg effect dictates the mechanism of butyrate-mediated histone acetylation and cell proliferation
-
Donohoe DR, Collins LB, Wali A, Bigler R, Sun W and Bultman SJ. The Warburg effect dictates the mechanism of butyrate-mediated histone acetylation and cell proliferation. Mol Cell. 2012; 48:612-626.
-
(2012)
Mol Cell
, vol.48
, pp. 612-626
-
-
Donohoe, D.R.1
Collins, L.B.2
Wali, A.3
Bigler, R.4
Sun, W.5
Bultman, S.J.6
-
39
-
-
84857765620
-
Targeting pioneering factor and hormone receptor cooperative pathways to suppress tumor progression
-
Shah S, Prasad S and Knudsen KE. Targeting pioneering factor and hormone receptor cooperative pathways to suppress tumor progression. Cancer Res. 2012; 72:1248-1259.
-
(2012)
Cancer Res
, vol.72
, pp. 1248-1259
-
-
Shah, S.1
Prasad, S.2
Knudsen, K.E.3
-
40
-
-
79955975429
-
Reciprocal feedback regulation of PI3K and androgen receptor signaling in PTEN-deficient prostate cancer
-
Carver BS, Chapinski C, Wongvipat J, Hieronymus H, Chen Y, Chandarlapaty S, Arora VK, Le C, Koutcher J, Scher H, Scardino PT, Rosen N and Sawyers CL. Reciprocal feedback regulation of PI3K and androgen receptor signaling in PTEN-deficient prostate cancer. Cancer Cell. 2011; 19:575-586.
-
(2011)
Cancer Cell
, vol.19
, pp. 575-586
-
-
Carver, B.S.1
Chapinski, C.2
Wongvipat, J.3
Hieronymus, H.4
Chen, Y.5
Chandarlapaty, S.6
Arora, V.K.7
Le, C.8
Koutcher, J.9
Scher, H.10
Scardino, P.T.11
Rosen, N.12
Sawyers, C.L.13
-
41
-
-
79958764107
-
Cell autonomous role of PTEN in regulating castrationresistant prostate cancer growth
-
Mulholland DJ, Tran LM, Li Y, Cai H, Morim A, Wang S, Plaisier S, Garraway IP, Huang J, Graeber TG and Wu H. Cell autonomous role of PTEN in regulating castrationresistant prostate cancer growth. Cancer Cell. 2011; 19:792-804.
-
(2011)
Cancer Cell
, vol.19
, pp. 792-804
-
-
Mulholland, D.J.1
Tran, L.M.2
Li, Y.3
Cai, H.4
Morim, A.5
Wang, S.6
Plaisier, S.7
Garraway, I.P.8
Huang, J.9
Graeber, T.G.10
Wu, H.11
-
42
-
-
84877984661
-
Dysregulated mTORC1 renders cells critically dependent on desaturated lipids for survival under tumor-like stress
-
Young RM, Ackerman D, Quinn ZL, Mancuso A, Gruber M, Liu L, Giannoukos DN, Bobrovnikova-Marjon E, Diehl JA, Keith B and Simon MC. Dysregulated mTORC1 renders cells critically dependent on desaturated lipids for survival under tumor-like stress. Genes Dev. 2013; 27:1115-1131.
-
(2013)
Genes Dev
, vol.27
, pp. 1115-1131
-
-
Young, R.M.1
Ackerman, D.2
Quinn, Z.L.3
Mancuso, A.4
Gruber, M.5
Liu, L.6
Giannoukos, D.N.7
Bobrovnikova-Marjon, E.8
Diehl, J.A.9
Keith, B.10
Simon, M.C.11
-
43
-
-
84984953610
-
Sterol regulatory element binding protein-dependent regulation of lipid synthesis supports cell survival and tumor growth
-
Griffiths B, Lewis CA, Bensaad K, Ros S, Zhang Q, Ferber EC, Konisti S, Peck B, Miess H, East P, Wakelam M, Harris AL and Schulze A. Sterol regulatory element binding protein-dependent regulation of lipid synthesis supports cell survival and tumor growth. Cancer Metab. 2013; 1:3.
-
(2013)
Cancer Metab
, vol.1
, pp. 3
-
-
Griffiths, B.1
Lewis, C.A.2
Bensaad, K.3
Ros, S.4
Zhang, Q.5
Ferber, E.C.6
Konisti, S.7
Peck, B.8
Miess, H.9
East, P.10
Wakelam, M.11
Harris, A.L.12
Schulze, A.13
-
44
-
-
84948085766
-
Oncogenes strike a balance between cellular growth and homeostasis
-
Qiu B and Simon MC. Oncogenes strike a balance between cellular growth and homeostasis. Semin Cell Dev Biol. 2015; 43:3-10.
-
(2015)
Semin Cell Dev Biol
, vol.43
, pp. 3-10
-
-
Qiu, B.1
Simon, M.C.2
-
45
-
-
0032529044
-
The role of ATP citrate-lyase in the metabolic regulation of plasma lipids. Hypolipidaemic effects of SB-204990, a lactone prodrug of the potent ATP citratelyase inhibitor SB-201076
-
Pearce NJ, Yates JW, Berkhout TA, Jackson B, Tew D, Boyd H, Camilleri P, Sweeney P, Gribble AD, Shaw A and Groot PH. The role of ATP citrate-lyase in the metabolic regulation of plasma lipids. Hypolipidaemic effects of SB-204990, a lactone prodrug of the potent ATP citratelyase inhibitor SB-201076. Biochem J. 1998; 334:113-119.
-
(1998)
Biochem J
, vol.334
, pp. 113-119
-
-
Pearce, N.J.1
Yates, J.W.2
Berkhout, T.A.3
Jackson, B.4
Tew, D.5
Boyd, H.6
Camilleri, P.7
Sweeney, P.8
Gribble, A.D.9
Shaw, A.10
Groot, P.H.11
-
46
-
-
77952567987
-
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
-
Heinz S, Benner C, Spann N, Bertolino E, Lin YC, Laslo P, Cheng JX, Murre C, Singh H and Glass CK. Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol Cell. 2010; 38:576-589.
-
(2010)
Mol Cell
, vol.38
, pp. 576-589
-
-
Heinz, S.1
Benner, C.2
Spann, N.3
Bertolino, E.4
Lin, Y.C.5
Laslo, P.6
Cheng, J.X.7
Murre, C.8
Singh, H.9
Glass, C.K.10
-
47
-
-
84906712846
-
The impact of the endoplasmic reticulum protein-folding environment on cancer development
-
Wang M and Kaufman RJ. The impact of the endoplasmic reticulum protein-folding environment on cancer development. Nat Rev Cancer. 2014; 14:581-597.
-
(2014)
Nat Rev Cancer
, vol.14
, pp. 581-597
-
-
Wang, M.1
Kaufman, R.J.2
-
48
-
-
84930179039
-
Divergent androgen regulation of unfolded protein response pathways drives prostate cancer
-
Sheng X, Arnoldussen YJ, Storm M, Tesikova M, Nenseth HZ, Zhao S, Fazli L, Rennie P, Risberg B, Waehre H, Danielsen H, Mills IG, Jin Y, Hotamisligil G and Saatcioglu F. Divergent androgen regulation of unfolded protein response pathways drives prostate cancer. EMBO molecular medicine. 2015; 7:788-801.
-
(2015)
EMBO molecular medicine
, vol.7
, pp. 788-801
-
-
Sheng, X.1
Arnoldussen, Y.J.2
Storm, M.3
Tesikova, M.4
Nenseth, H.Z.5
Zhao, S.6
Fazli, L.7
Rennie, P.8
Risberg, B.9
Waehre, H.10
Danielsen, H.11
Mills, I.G.12
Jin, Y.13
Hotamisligil, G.14
Saatcioglu, F.15
-
49
-
-
10644233167
-
CHOP induces death by promoting protein synthesis and oxidation in the stressed endoplasmic reticulum
-
Marciniak SJ, Yun CY, Oyadomari S, Novoa I, Zhang Y, Jungreis R, Nagata K, Harding HP and Ron D. CHOP induces death by promoting protein synthesis and oxidation in the stressed endoplasmic reticulum. Genes Dev. 2004; 18:3066-3077.
-
(2004)
Genes Dev
, vol.18
, pp. 3066-3077
-
-
Marciniak, S.J.1
Yun, C.Y.2
Oyadomari, S.3
Novoa, I.4
Zhang, Y.5
Jungreis, R.6
Nagata, K.7
Harding, H.P.8
Ron, D.9
-
50
-
-
55849096988
-
Chop deletion reduces oxidative stress, improves beta cell function, and promotes cell survival in multiple mouse models of diabetes
-
Song B, Scheuner D, Ron D, Pennathur S and Kaufman RJ. Chop deletion reduces oxidative stress, improves beta cell function, and promotes cell survival in multiple mouse models of diabetes. J Clin Invest. 2008; 118:3378-3389.
-
(2008)
J Clin Invest
, vol.118
, pp. 3378-3389
-
-
Song, B.1
Scheuner, D.2
Ron, D.3
Pennathur, S.4
Kaufman, R.J.5
-
51
-
-
84869027086
-
ATF4 regulates MYC-mediated neuroblastoma cell death upon glutamine deprivation
-
Qing G, Li B, Vu A, Skuli N, Walton ZE, Liu X, Mayes PA, Wise DR, Thompson CB, Maris JM, Hogarty MD and Simon MC. ATF4 regulates MYC-mediated neuroblastoma cell death upon glutamine deprivation. Cancer Cell. 2012; 22:631-644.
-
(2012)
Cancer Cell
, vol.22
, pp. 631-644
-
-
Qing, G.1
Li, B.2
Vu, A.3
Skuli, N.4
Walton, Z.E.5
Liu, X.6
Mayes, P.A.7
Wise, D.R.8
Thompson, C.B.9
Maris, J.M.10
Hogarty, M.D.11
Simon, M.C.12
-
52
-
-
0032054744
-
CHOP is implicated in programmed cell death in response to impaired function of the endoplasmic reticulum
-
Zinszner H, Kuroda M, Wang X, Batchvarova N, Lightfoot RT, Remotti H, Stevens JL and Ron D. CHOP is implicated in programmed cell death in response to impaired function of the endoplasmic reticulum. Genes Dev. 1998; 12:982-995.
-
(1998)
Genes Dev
, vol.12
, pp. 982-995
-
-
Zinszner, H.1
Kuroda, M.2
Wang, X.3
Batchvarova, N.4
Lightfoot, R.T.5
Remotti, H.6
Stevens, J.L.7
Ron, D.8
-
53
-
-
33847034466
-
Inhibition of fatty acid synthase induces endoplasmic reticulum stress in tumor cells
-
Little JL, Wheeler FB, Fels DR, Koumenis C and Kridel SJ. Inhibition of fatty acid synthase induces endoplasmic reticulum stress in tumor cells. Cancer Res. 2007; 67:1262-1269.
-
(2007)
Cancer Res
, vol.67
, pp. 1262-1269
-
-
Little, J.L.1
Wheeler, F.B.2
Fels, D.R.3
Koumenis, C.4
Kridel, S.J.5
-
54
-
-
84980050613
-
HIF2alpha-Dependent Lipid Storage Promotes Endoplasmic Reticulum Homeostasis in Clear-Cell Renal Cell Carcinoma
-
Qiu B, Ackerman D, Sanchez DJ, Li B, Ochocki JD, Grazioli A, Bobrovnikova-Marjon E, Diehl JA, Keith B and Simon MC. HIF2alpha-Dependent Lipid Storage Promotes Endoplasmic Reticulum Homeostasis in Clear-Cell Renal Cell Carcinoma. Cancer Discov. 2015; 5:652-667.
-
(2015)
Cancer Discov
, vol.5
, pp. 652-667
-
-
Qiu, B.1
Ackerman, D.2
Sanchez, D.J.3
Li, B.4
Ochocki, J.D.5
Grazioli, A.6
Bobrovnikova-Marjon, E.7
Diehl, J.A.8
Keith, B.9
Simon, M.C.10
-
55
-
-
84919797456
-
Lipid-dependent regulation of the unfolded protein response
-
Volmer R and Ron D. Lipid-dependent regulation of the unfolded protein response. Curr Opin Cell Biol. 2015; 33:67-73.
-
(2015)
Curr Opin Cell Biol
, vol.33
, pp. 67-73
-
-
Volmer, R.1
Ron, D.2
-
56
-
-
84903532323
-
Transcriptomic analysis reveals inhibition of androgen receptor activity by AMPK in prostate cancer cells
-
Jurmeister S, Ramos-Montoya A, Neal DE and Fryer LG. Transcriptomic analysis reveals inhibition of androgen receptor activity by AMPK in prostate cancer cells. Oncotarget. 2014; 5:3785-3799. doi: 10.18632/oncotarget.1997.
-
(2014)
Oncotarget
, vol.5
, pp. 3785-3799
-
-
Jurmeister, S.1
Ramos-Montoya, A.2
Neal, D.E.3
Fryer, L.G.4
-
57
-
-
84867327385
-
Activation of AMP-activated protein kinase by 3, 3'-Diindolylmethane (DIM) is associated with human prostate cancer cell death in vitro and in vivo
-
Chen D, Banerjee S, Cui QC, Kong D, Sarkar FH and Dou QP. Activation of AMP-activated protein kinase by 3, 3'-Diindolylmethane (DIM) is associated with human prostate cancer cell death in vitro and in vivo. PLoS One. 2012; 7:e47186.
-
(2012)
PLoS One
, vol.7
-
-
Chen, D.1
Banerjee, S.2
Cui, Q.C.3
Kong, D.4
Sarkar, F.H.5
Dou, Q.P.6
-
58
-
-
84894249512
-
The interplay of AMP-activated protein kinase and androgen receptor in prostate cancer cells
-
Shen M, Zhang Z, Ratnam M and Dou QP. The interplay of AMP-activated protein kinase and androgen receptor in prostate cancer cells. J Cell Physiol. 2014; 229:688-695.
-
(2014)
J Cell Physiol
, vol.229
, pp. 688-695
-
-
Shen, M.1
Zhang, Z.2
Ratnam, M.3
Dou, Q.P.4
-
59
-
-
84927563455
-
Fatty acid carbon is essential for dNTP synthesis in endothelial cells
-
Schoors S, Bruning U, Missiaen R, Queiroz KC, Borgers G, Elia I, Zecchin A, Cantelmo AR, Christen S, Goveia J, Heggermont W, Godde L, Vinckier S, et al. Fatty acid carbon is essential for dNTP synthesis in endothelial cells. Nature. 2015; 520:192-197.
-
(2015)
Nature
, vol.520
, pp. 192-197
-
-
Schoors, S.1
Bruning, U.2
Missiaen, R.3
Queiroz, K.C.4
Borgers, G.5
Elia, I.6
Zecchin, A.7
Cantelmo, A.R.8
Christen, S.9
Goveia, J.10
Heggermont, W.11
Godde, L.12
Vinckier, S.13
-
60
-
-
85027911112
-
Androgens regulate prostate cancer cell growth via an AMPK-PGC-1alphamediated metabolic switch
-
Tennakoon JB, Shi Y, Han JJ, Tsouko E, White MA, Burns AR, Zhang A, Xia X, Ilkayeva OR, Xin L, Ittmann MM, Rick FG, Schally AV and Frigo DE. Androgens regulate prostate cancer cell growth via an AMPK-PGC-1alphamediated metabolic switch. Oncogene. 2013.
-
(2013)
Oncogene
-
-
Tennakoon, J.B.1
Shi, Y.2
Han, J.J.3
Tsouko, E.4
White, M.A.5
Burns, A.R.6
Zhang, A.7
Xia, X.8
Ilkayeva, O.R.9
Xin, L.10
Ittmann, M.M.11
Rick, F.G.12
Schally, A.V.13
Frigo, D.E.14
-
61
-
-
84926618078
-
Lipid Catabolism via CPT1 as a Therapeutic Target for Prostate Cancer
-
Schlaepfer IR, Rider L, Rodrigues LU, Gijon MA, Pac CT, Romero L, Cimic A, Sirintrapun SJ, Glode LM, Eckel RH and Cramer SD. Lipid Catabolism via CPT1 as a Therapeutic Target for Prostate Cancer. Mol Cancer Ther. 2014.
-
(2014)
Mol Cancer Ther
-
-
Schlaepfer, I.R.1
Rider, L.2
Rodrigues, L.U.3
Gijon, M.A.4
Pac, C.T.5
Romero, L.6
Cimic, A.7
Sirintrapun, S.J.8
Glode, L.M.9
Eckel, R.H.10
Cramer, S.D.11
-
62
-
-
84937525644
-
Inhibition of Lipid Oxidation Increases Glucose Metabolism and Enhances 2-Deoxy-2-[(18)F]Fluoro-D-Glucose Uptake in Prostate Cancer Mouse Xenografts
-
Schlaepfer IR, Glode LM, Hitz CA, Pac CT, Boyle KE, Maroni P, Deep G, Agarwal R, Lucia SM, Cramer SD, Serkova NJ and Eckel RH. Inhibition of Lipid Oxidation Increases Glucose Metabolism and Enhances 2-Deoxy-2-[(18)F]Fluoro-D-Glucose Uptake in Prostate Cancer Mouse Xenografts. Mol Imaging Biol. 2015; 17:529-538.
-
(2015)
Mol Imaging Biol
, vol.17
, pp. 529-538
-
-
Schlaepfer, I.R.1
Glode, L.M.2
Hitz, C.A.3
Pac, C.T.4
Boyle, K.E.5
Maroni, P.6
Deep, G.7
Agarwal, R.8
Lucia, S.M.9
Cramer, S.D.10
Serkova, N.J.11
Eckel, R.H.12
-
63
-
-
79959481888
-
Protein folding and modification in the mammalian endoplasmic reticulum
-
Braakman I and Bulleid NJ. Protein folding and modification in the mammalian endoplasmic reticulum. Annu Rev Biochem. 2011; 80:71-99.
-
(2011)
Annu Rev Biochem
, vol.80
, pp. 71-99
-
-
Braakman, I.1
Bulleid, N.J.2
-
64
-
-
78650885452
-
The ER UDPase ENTPD5 promotes protein N-glycosylation, the Warburg effect, and proliferation in the PTEN pathway
-
Fang M, Shen Z, Huang S, Zhao L, Chen S, Mak TW and Wang X. The ER UDPase ENTPD5 promotes protein N-glycosylation, the Warburg effect, and proliferation in the PTEN pathway. Cell. 2010; 143:711-724.
-
(2010)
Cell
, vol.143
, pp. 711-724
-
-
Fang, M.1
Shen, Z.2
Huang, S.3
Zhao, L.4
Chen, S.5
Mak, T.W.6
Wang, X.7
-
65
-
-
84867427988
-
ENTPD5, an endoplasmic reticulum UDPase, alleviates ER stress induced by protein overloading in AKT-activated cancer cells
-
Shen Z, Huang S, Fang M and Wang X. ENTPD5, an endoplasmic reticulum UDPase, alleviates ER stress induced by protein overloading in AKT-activated cancer cells. Cold Spring Harb Symp Quant Biol. 2011; 76:217-223.
-
(2011)
Cold Spring Harb Symp Quant Biol
, vol.76
, pp. 217-223
-
-
Shen, Z.1
Huang, S.2
Fang, M.3
Wang, X.4
-
66
-
-
79251502952
-
ATP consumption promotes cancer metabolism
-
Israelsen WJ and Vander Heiden MG. ATP consumption promotes cancer metabolism. Cell. 2010; 143:669-671.
-
(2010)
Cell
, vol.143
, pp. 669-671
-
-
Israelsen, W.J.1
Vander Heiden, M.G.2
-
67
-
-
84989927952
-
Electronic address scmo and Cancer Genome Atlas Research N. The Molecular Taxonomy of Primary Prostate Cancer
-
Cancer Genome Atlas Research Network. Electronic address scmo and Cancer Genome Atlas Research N. The Molecular Taxonomy of Primary Prostate Cancer. Cell. 2015; 163:1011-1025.
-
(2015)
Cell
, vol.163
, pp. 1011-1025
-
-
-
68
-
-
84953322856
-
Metformin Antagonizes Cancer Cell Proliferation by Suppressing Mitochondrial-Dependent Biosynthesis
-
Griss T, Vincent EE, Egnatchik R, Chen J, Ma EH, Faubert B, Viollet B, DeBerardinis RJ and Jones RG. Metformin Antagonizes Cancer Cell Proliferation by Suppressing Mitochondrial-Dependent Biosynthesis. PLoS Biol. 2015; 13:e1002309.
-
(2015)
PLoS Biol
, vol.13
-
-
Griss, T.1
Vincent, E.E.2
Egnatchik, R.3
Chen, J.4
Ma, E.H.5
Faubert, B.6
Viollet, B.7
DeBerardinis, R.J.8
Jones, R.G.9
-
69
-
-
79551487613
-
AMP-activated protein kinase: a cellular energy sensor with a key role in metabolic disorders and in cancer
-
Hardie DG. AMP-activated protein kinase: a cellular energy sensor with a key role in metabolic disorders and in cancer. Biochem Soc Trans. 2011; 39:1-13.
-
(2011)
Biochem Soc Trans
, vol.39
, pp. 1-13
-
-
Hardie, D.G.1
-
70
-
-
84894573802
-
Efficacy and safety of ETC-1002, a novel investigational low-density lipoprotein-cholesterollowering therapy for the treatment of patients with hypercholesterolemia and type 2 diabetes mellitus
-
Gutierrez MJ, Rosenberg NL, Macdougall DE, Hanselman JC, Margulies JR, Strange P, Milad MA, McBride SJ and Newton RS. Efficacy and safety of ETC-1002, a novel investigational low-density lipoprotein-cholesterollowering therapy for the treatment of patients with hypercholesterolemia and type 2 diabetes mellitus. Arterioscler Thromb Vasc Biol. 2014; 34:676-683.
-
(2014)
Arterioscler Thromb Vasc Biol
, vol.34
, pp. 676-683
-
-
Gutierrez, M.J.1
Rosenberg, N.L.2
Macdougall, D.E.3
Hanselman, J.C.4
Margulies, J.R.5
Strange, P.6
Milad, M.A.7
McBride, S.J.8
Newton, R.S.9
-
71
-
-
84871226706
-
AMP-activated protein kinase and ATP-citrate lyase are two distinct molecular targets for ETC-1002, a novel small molecule regulator of lipid and carbohydrate metabolism
-
Pinkosky SL, Filippov S, Srivastava RA, Hanselman JC, Bradshaw CD, Hurley TR, Cramer CT, Spahr MA, Brant AF, Houghton JL, Baker C, Naples M, Adeli K and Newton RS. AMP-activated protein kinase and ATP-citrate lyase are two distinct molecular targets for ETC-1002, a novel small molecule regulator of lipid and carbohydrate metabolism. J Lipid Res. 2013; 54:134-151.
-
(2013)
J Lipid Res
, vol.54
, pp. 134-151
-
-
Pinkosky, S.L.1
Filippov, S.2
Srivastava, R.A.3
Hanselman, J.C.4
Bradshaw, C.D.5
Hurley, T.R.6
Cramer, C.T.7
Spahr, M.A.8
Brant, A.F.9
Houghton, J.L.10
Baker, C.11
Naples, M.12
Adeli, K.13
Newton, R.S.14
-
72
-
-
84896410247
-
Targeting autophagy overcomes Enzalutamide resistance in castration-resistant prostate cancer cells and improves therapeutic response in a xenograft model
-
Nguyen HG, Yang JC, Kung HJ, Shi XB, Tilki D, Lara PN, Jr., DeVere White RW, Gao AC and Evans CP. Targeting autophagy overcomes Enzalutamide resistance in castration-resistant prostate cancer cells and improves therapeutic response in a xenograft model. Oncogene. 2014; 33:4521-4530.
-
(2014)
Oncogene
, vol.33
, pp. 4521-4530
-
-
Nguyen, H.G.1
Yang, J.C.2
Kung, H.J.3
Shi, X.B.4
Tilki, D.5
Lara, P.N.6
DeVere White, R.W.7
Gao, A.C.8
Evans, C.P.9
-
73
-
-
84896518278
-
p300 acetyltransferase regulates androgen receptor degradation and PTEN-deficient prostate tumorigenesis
-
Zhong J, Ding L, Bohrer LR, Pan Y, Liu P, Zhang J, Sebo TJ, Karnes RJ, Tindall DJ, van Deursen J and Huang H. p300 acetyltransferase regulates androgen receptor degradation and PTEN-deficient prostate tumorigenesis. Cancer Res. 2014; 74:1870-1880.
-
(2014)
Cancer Res
, vol.74
, pp. 1870-1880
-
-
Zhong, J.1
Ding, L.2
Bohrer, L.R.3
Pan, Y.4
Liu, P.5
Zhang, J.6
Sebo, T.J.7
Karnes, R.J.8
Tindall, D.J.9
van Deursen, J.10
Huang, H.11
-
74
-
-
84886768058
-
DNMT1 Is Regulated by ATP-Citrate Lyase and Maintains Methylation Patterns during Adipocyte Differentiation
-
Londono Gentile T, Lu C, Lodato PM, Tse S, Olejniczak SH, Witze ES, Thompson CB and Wellen KE. DNMT1 Is Regulated by ATP-Citrate Lyase and Maintains Methylation Patterns during Adipocyte Differentiation. Mol Cell Biol. 2013; 33:3864-3878.
-
(2013)
Mol Cell Biol
, vol.33
, pp. 3864-3878
-
-
Londono Gentile, T.1
Lu, C.2
Lodato, P.M.3
Tse, S.4
Olejniczak, S.H.5
Witze, E.S.6
Thompson, C.B.7
Wellen, K.E.8
-
75
-
-
84860498026
-
IsoCor: correcting MS data in isotope labeling experiments
-
Millard P, Letisse F, Sokol S and Portais JC. IsoCor: correcting MS data in isotope labeling experiments. Bioinformatics. 2012; 28:1294-1296.
-
(2012)
Bioinformatics
, vol.28
, pp. 1294-1296
-
-
Millard, P.1
Letisse, F.2
Sokol, S.3
Portais, J.C.4
-
76
-
-
29244453502
-
Intracellular nucleotide and nucleotide sugar contents of cultured CHO cells determined by a fast, sensitive, and high-resolution ion-pair RP-HPLC
-
Kochanowski N, Blanchard F, Cacan R, Chirat F, Guedon E, Marc A and Goergen JL. Intracellular nucleotide and nucleotide sugar contents of cultured CHO cells determined by a fast, sensitive, and high-resolution ion-pair RP-HPLC. Anal Biochem. 2006; 348:243-251.
-
(2006)
Anal Biochem
, vol.348
, pp. 243-251
-
-
Kochanowski, N.1
Blanchard, F.2
Cacan, R.3
Chirat, F.4
Guedon, E.5
Marc, A.6
Goergen, J.L.7
-
77
-
-
80052745094
-
Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM)
-
Grant GR, Farkas MH, Pizarro AD, Lahens NF, Schug J, Brunk BP, Stoeckert CJ, Hogenesch JB and Pierce EA. Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). Bioinformatics. 2011; 27:2518-2528.
-
(2011)
Bioinformatics
, vol.27
, pp. 2518-2528
-
-
Grant, G.R.1
Farkas, M.H.2
Pizarro, A.D.3
Lahens, N.F.4
Schug, J.5
Brunk, B.P.6
Stoeckert, C.J.7
Hogenesch, J.B.8
Pierce, E.A.9
-
78
-
-
75249087100
-
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson MD, McCarthy DJ and Smyth GK. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics. 2010; 26:139-140.
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
79
-
-
0003126516
-
Fast optimal leaf ordering for hierarchical clustering
-
Bar-Joseph Z, Gifford DK and Jaakkola TS. Fast optimal leaf ordering for hierarchical clustering. Bioinformatics. 2001; 17 Suppl 1:S22-29.
-
(2001)
Bioinformatics
, vol.17
, pp. S22-S29
-
-
Bar-Joseph, Z.1
Gifford, D.K.2
Jaakkola, T.S.3
-
81
-
-
84875740314
-
Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal
-
Gao J, Aksoy BA, Dogrusoz U, Dresdner G, Gross B, Sumer SO, Sun Y, Jacobsen A, Sinha R, Larsson E, Cerami E, Sander C and Schultz N. Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal. Sci Signal. 2013; 6:pl1.
-
(2013)
Sci Signal
, vol.6
-
-
Gao, J.1
Aksoy, B.A.2
Dogrusoz, U.3
Dresdner, G.4
Gross, B.5
Sumer, S.O.6
Sun, Y.7
Jacobsen, A.8
Sinha, R.9
Larsson, E.10
Cerami, E.11
Sander, C.12
Schultz, N.13
-
82
-
-
84866002291
-
The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data
-
Cerami E, Gao J, Dogrusoz U, Gross BE, Sumer SO, Aksoy BA, Jacobsen A, Byrne CJ, Heuer ML, Larsson E, Antipin Y, Reva B, Goldberg AP, Sander C and Schultz N. The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data. Cancer Discov. 2012; 2:401-404.
-
(2012)
Cancer Discov
, vol.2
, pp. 401-404
-
-
Cerami, E.1
Gao, J.2
Dogrusoz, U.3
Gross, B.E.4
Sumer, S.O.5
Aksoy, B.A.6
Jacobsen, A.7
Byrne, C.J.8
Heuer, M.L.9
Larsson, E.10
Antipin, Y.11
Reva, B.12
Goldberg, A.P.13
Sander, C.14
Schultz, N.15
|