Fast optimal leaf ordering for hierarchical clustering

Bioinformatics

Volumn 17, Issue SUPPL. 1, 2001, Pages

  Bar Joseph, Ziv ^a   Gifford, David K ^a   Jaakkola, Tommi S ^a  

^a MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGY; CELL CYCLE; CLUSTER ANALYSIS; CYTOLOGY; FUNGAL GENE; GENE EXPRESSION PROFILING; GENETIC DATABASE; GENETICS; MULTIGENE FAMILY; SACCHAROMYCES CEREVISIAE; STATISTICS;

ALGORITHMS; CELL CYCLE; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; GENE EXPRESSION PROFILING; GENES, FUNGAL; MULTIGENE FAMILY; SACCHAROMYCES CEREVISIAE;

EID: 0003126516     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/17.suppl_1.S22     Document Type: Article

References (8)

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3. Bar-Joseph, Z., Gifford, D. & Jaakkola, T. (2001). Fast optimal leaf ordering for hierarchical clustering. http://www.psrg.lcs.mit.edu/clutstering/ismb01/optimal.html.
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5. Eisen, M., Spellman, P., Brown, P. & Botstein, D. (1998). Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA, 95, 14863-14868.
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7. Spellman, T. S., Sherlock, G. & et al (1998). Comprehensive identification of cell cycle-regulated genes of the yeast saccharomyces cerevisia by microarray hybridization. Mol. Biol. of the Cell, 9, 3273-3297.
8. Tamayo, P., Slonim, D. & et al (1999). Interpreting patterns of gene expression with self organizing maps: Methods and applications to hematopoietic differentiation. Proc. Natl. Acad. Sci. USA, 96, 2907-2912.