Genome-wide mapping of 5-hydroxymethylcytosine in three rice cultivars reveals its preferential localization in transcriptionally silent transposable element genes

Journal of Experimental Botany

Volumn 66, Issue 21, 2015, Pages 6651-6663

  Wang, Xi Liang ^a,b   Song, Shu Hui ^a   Wu, Yong Sheng ^c   Li, Yu Li ^a,b   Chen, Ting Ting ^a   Huang, Zhi Yuan ^d   Liu, Shuo ^e   Dunwell, Thomas L ^f   Pfeifer, Gerd P ^g   Dunwell, Jim M ^h   Wamaedeesa, Raheema ^h   Ullah, Ihsan ^h,i   Wang, Yinsheng ^e   Hu, Song Nian ^a  

^a Chinese Academy of Sciences   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

^c Mudanjiang Youbo Pharmaceutical CoLtd   (China)

^d HUNAN HYBRID RICE RESEARCH CENTER   (China)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f UNIVERSITY OF OXFORD   (United Kingdom)

^g CITY OF HOPE NATIONAL MEDICAL CENTER   (United States)

^h UNIVERSITY OF READING   (United Kingdom)

ⁱ Agricultural Biotechnology Research Institute   (Pakistan)

Author keywords

5 hydroxymethylcytosine; 5hmC profiles; Heterochromatin; Rice; Transposable element

Indexed keywords

5-HYDROXYMETHYLCYTOSINE; CYTOSINE; PLANT DNA; TRANSPOSON;

ANALOGS AND DERIVATIVES; CHROMOSOMAL MAPPING; DNA SEQUENCE; GENETIC EPIGENESIS; GENETICS; HIGH THROUGHPUT SEQUENCING; LIQUID CHROMATOGRAPHY; METABOLISM; ORYZA; TANDEM MASS SPECTROMETRY; TRANSPOSON;

CHROMATOGRAPHY, LIQUID; CHROMOSOME MAPPING; CYTOSINE; DNA TRANSPOSABLE ELEMENTS; DNA, PLANT; EPIGENESIS, GENETIC; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; ORYZA; SEQUENCE ANALYSIS, DNA; TANDEM MASS SPECTROMETRY;

EID: 84948407931     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/erv372     Document Type: Article

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