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Volumn 25, Issue 11, 2008, Pages 2331-2336

The legacy of domestication: Accumulation of deleterious mutations in the dog genome

Author keywords

Bottleneck; Dog genome; Domestication; Genetic drift; Purifying selection; Selective constraint

Indexed keywords

ALLELE; ARTICLE; DOG; DOMESTIC ANIMAL; DOMESTICATION; GENE LOCUS; GENE MUTATION; NONHUMAN; PHENOTYPIC VARIATION; SINGLE NUCLEOTIDE POLYMORPHISM; SPECIES DIFFERENCE; WOLF;

EID: 54149110152     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msn177     Document Type: Article
Times cited : (124)

References (33)
  • 1
    • 1542350622 scopus 로고    scopus 로고
    • Domestic-animal genomics: Deciphering the genetics of complex traits
    • Andersson L, Georges M. 2004. Domestic-animal genomics: deciphering the genetics of complex traits. Nat Rev Genet. 5:202-212.
    • (2004) Nat Rev Genet , vol.5 , pp. 202-212
    • Andersson, L.1    Georges, M.2
  • 2
    • 33746731132 scopus 로고    scopus 로고
    • Relaxation of selective constraint on dog mitochondrial DNA following domestication
    • Björnerfeldt S, Webster MT, Vilà C. 2006. Relaxation of selective constraint on dog mitochondrial DNA following domestication. Genome Res. 16:990-994.
    • (2006) Genome Res , vol.16 , pp. 990-994
    • Björnerfeldt, S.1    Webster, M.T.2    Vilà, C.3
  • 3
    • 0242354083 scopus 로고    scopus 로고
    • DNA markers reveal the complexity of livestock domestication
    • Bruford MW, Bradley DG, Luikart G. 2003. DNA markers reveal the complexity of livestock domestication. Nat Rev Genet. 4:900.
    • (2003) Nat Rev Genet , vol.4 , pp. 900
    • Bruford, M.W.1    Bradley, D.G.2    Luikart, G.3
  • 5
    • 37349011445 scopus 로고    scopus 로고
    • The Hill-Robertson effect: Evolutionary consequences of weak selection and linkage in finite populations
    • Comeron JM, Williford A, Kliman RM. 2008. The Hill-Robertson effect: evolutionary consequences of weak selection and linkage in finite populations. Heredity. 100:19-31.
    • (2008) Heredity , vol.100 , pp. 19-31
    • Comeron, J.M.1    Williford, A.2    Kliman, R.M.3
  • 7
    • 11144230088 scopus 로고    scopus 로고
    • Molecular origins of rapid and continuous morphological evolution
    • Fondon JW III, Garner HR. 2004. Molecular origins of rapid and continuous morphological evolution. Proc Natl Acad Sci USA. 101:18058-18063.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 18058-18063
    • Fondon III, J.W.1    Garner, H.R.2
  • 8
    • 0028168856 scopus 로고
    • A codon-based model of nucleotide substitution for protein-coding DNA sequences
    • Goldman N, Yang Z. 1994. A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol Biol Evol. 11:725-736.
    • (1994) Mol Biol Evol , vol.11 , pp. 725-736
    • Goldman, N.1    Yang, Z.2
  • 9
    • 0031729188 scopus 로고    scopus 로고
    • Preponderance of slightly deleterious polymorphism in mitochondrial DNA: Nonsynonymous/ synonymous rate ratio is much higher within species than between species
    • Hasegawa M, Cao Y, Yang Z. 1998. Preponderance of slightly deleterious polymorphism in mitochondrial DNA: nonsynonymous/ synonymous rate ratio is much higher within species than between species. Mol Biol Evol. 15:1499-1505.
    • (1998) Mol Biol Evol , vol.15 , pp. 1499-1505
    • Hasegawa, M.1    Cao, Y.2    Yang, Z.3
  • 10
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • Hill WG, Robertson A. 1966. The effect of linkage on limits to artificial selection. Genet Res. 8:269-294.
    • (1966) Genet Res , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 11
    • 35648953308 scopus 로고    scopus 로고
    • Karlsson EK, Baranowska I, Wade CM, et al. (20 co-authors). 2007. Efficient mapping of mendelian traits in dogs through genome-wide association. Nat Genet. 39:1321-1328.
    • Karlsson EK, Baranowska I, Wade CM, et al. (20 co-authors). 2007. Efficient mapping of mendelian traits in dogs through genome-wide association. Nat Genet. 39:1321-1328.
  • 12
    • 0000800333 scopus 로고
    • On the probability of fixation of mutant genes in a population
    • Kimura M. 1962. On the probability of fixation of mutant genes in a population. Genetics. 47:713-719.
    • (1962) Genetics , vol.47 , pp. 713-719
    • Kimura, M.1
  • 13
    • 34548391393 scopus 로고    scopus 로고
    • Localization of white spotting locus in Boxer dogs on CFA20 by genome-wide linkage analysis with 1500 SNPs
    • Leegwater PA, van Hagen MA, van Oost BA. 2007. Localization of white spotting locus in Boxer dogs on CFA20 by genome-wide linkage analysis with 1500 SNPs. J Hered. 98:549-552.
    • (2007) J Hered , vol.98 , pp. 549-552
    • Leegwater, P.A.1    van Hagen, M.A.2    van Oost, B.A.3
  • 14
    • 85121191713 scopus 로고    scopus 로고
    • Lindblad-Toh K, Wade CM, Mikkelsen TS, et al. (46 coauthors). 2005. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature. 438:803.
    • Lindblad-Toh K, Wade CM, Mikkelsen TS, et al. (46 coauthors). 2005. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature. 438:803.
  • 15
    • 33344458581 scopus 로고    scopus 로고
    • The accumulation of deleterious mutations in rice genomes: A hypothesis on the cost of domestication
    • Lu J, Tang T, Tang H, Huang J, Shi S, Wu C-I. 2006. The accumulation of deleterious mutations in rice genomes: a hypothesis on the cost of domestication. Trends Genet. 22:126-131.
    • (2006) Trends Genet , vol.22 , pp. 126-131
    • Lu, J.1    Tang, T.2    Tang, H.3    Huang, J.4    Shi, S.5    Wu, C.-I.6
  • 16
    • 0033794759 scopus 로고    scopus 로고
    • Unleashing the canine genome
    • Ostrander EA, Kruglyak L. 2000. Unleashing the canine genome. Genome Res. 10:1271-1274.
    • (2000) Genome Res , vol.10 , pp. 1271-1274
    • Ostrander, E.A.1    Kruglyak, L.2
  • 17
    • 36048982458 scopus 로고    scopus 로고
    • Pontius JU, Mullikin JC, Smith DR, et al. (24 co-authors). 2007. Initial sequence and comparative analysis of the cat genome. Genome Res. 17:1675-1689.
    • Pontius JU, Mullikin JC, Smith DR, et al. (24 co-authors). 2007. Initial sequence and comparative analysis of the cat genome. Genome Res. 17:1675-1689.
  • 18
    • 0030000951 scopus 로고    scopus 로고
    • Excess amino acid polymorphism in mitochondrial DNA: Contrasts among genes from Drosophila, mice, and humans
    • Rand DM, Kann LM. 1996. Excess amino acid polymorphism in mitochondrial DNA: contrasts among genes from Drosophila, mice, and humans. Mol Biol Evol. 13:735-748.
    • (1996) Mol Biol Evol , vol.13 , pp. 735-748
    • Rand, D.M.1    Kann, L.M.2
  • 19
    • 0037910313 scopus 로고    scopus 로고
    • Patterns of transitional mutation biases within and among mammalian genomes
    • Rosenberg MS, Subramanian S, Kumar S. 2003. Patterns of transitional mutation biases within and among mammalian genomes. Mol Biol Evol. 20:988-993.
    • (2003) Mol Biol Evol , vol.20 , pp. 988-993
    • Rosenberg, M.S.1    Subramanian, S.2    Kumar, S.3
  • 20
    • 2442713362 scopus 로고    scopus 로고
    • The earliest ice age dogs: Evidence from Eliseevichi 1
    • Sablin MV, Khlopachev GA. 2002. The earliest ice age dogs: evidence from Eliseevichi 1. Curr Anthropol. 43:795-799.
    • (2002) Curr Anthropol , vol.43 , pp. 795-799
    • Sablin, M.V.1    Khlopachev, G.A.2
  • 23
    • 34147113272 scopus 로고    scopus 로고
    • Sutter NB, Bustamante CD, Chase K, et al. (21 co-authors). 2007. A single IGF1 allele is a major determinant of small size in dogs. Science. 316:112-115.
    • Sutter NB, Bustamante CD, Chase K, et al. (21 co-authors). 2007. A single IGF1 allele is a major determinant of small size in dogs. Science. 316:112-115.
  • 24
    • 9444243847 scopus 로고    scopus 로고
    • Dog star rising: The canine genetic system
    • Sutter NB, Ostrander EA. 2004. Dog star rising: the canine genetic system. Nat Rev Genet. 5:900-910.
    • (2004) Nat Rev Genet , vol.5 , pp. 900-910
    • Sutter, N.B.1    Ostrander, E.A.2
  • 25
    • 0027453388 scopus 로고
    • Simple methods for testing the molecular evolutionary clock hypothesis
    • Tajima F. 1993. Simple methods for testing the molecular evolutionary clock hypothesis. Genetics. 135:599-607.
    • (1993) Genetics , vol.135 , pp. 599-607
    • Tajima, F.1
  • 27
    • 28844501661 scopus 로고    scopus 로고
    • Short interspersed elements (SINEs) are a major source of canine genomic diversity
    • Wang W, Kirkness EF. 2005. Short interspersed elements (SINEs) are a major source of canine genomic diversity. Genome Res. 15:1798-1808.
    • (2005) Genome Res , vol.15 , pp. 1798-1808
    • Wang, W.1    Kirkness, E.F.2
  • 28
    • 0022620631 scopus 로고
    • Limb morphology of domestic and wild canids: The influence of development on morphologic change
    • Wayne RK. 1986a. Limb morphology of domestic and wild canids: the influence of development on morphologic change. J Morphol. 187:301-319.
    • (1986) J Morphol , vol.187 , pp. 301-319
    • Wayne, R.K.1
  • 29
    • 0001333969 scopus 로고
    • Cranial morphology of domestic and wild canids: The influence of development on morphological change
    • Wayne RK. 1986b. Cranial morphology of domestic and wild canids: the influence of development on morphological change. Evolution. 40:243.
    • (1986) Evolution , vol.40 , pp. 243
    • Wayne, R.K.1
  • 30
    • 35748957135 scopus 로고    scopus 로고
    • Lessons learned from the dog genome
    • Wayne RK, Ostrander EA. 2007. Lessons learned from the dog genome. Trends Genet. 23:557-567.
    • (2007) Trends Genet , vol.23 , pp. 557-567
    • Wayne, R.K.1    Ostrander, E.A.2
  • 31
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program for package for phylogenetic analysis by maximum likelihood
    • Yang Z. 1997. PAML: a program for package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci. 13:555-556.
    • (1997) Comput Appl Biosci , vol.13 , pp. 555-556
    • Yang, Z.1
  • 32
    • 33344466214 scopus 로고    scopus 로고
    • Documenting domestication: The intersection of genetics and archaeology
    • Zeder MA, Emshwiller E, Smith BD, Bradley DG. 2006. Documenting domestication: the intersection of genetics and archaeology. Trends Genet. 22:139-155.
    • (2006) Trends Genet , vol.22 , pp. 139-155
    • Zeder, M.A.1    Emshwiller, E.2    Smith, B.D.3    Bradley, D.G.4
  • 33
    • 0033921902 scopus 로고    scopus 로고
    • Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes
    • Zhang J. 2000. Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes. J Mol Evol. 50:56-68.
    • (2000) J Mol Evol , vol.50 , pp. 56-68
    • Zhang, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.