-
1
-
-
54049135943
-
Detection of protein-ligand interactions by NMR using reductive methylation of lysine residues
-
Abraham SJ, Hoheisel S, Gaponenko V (2008) Detection of protein-ligand interactions by NMR using reductive methylation of lysine residues. J Biomol NMR 42:143-148. doi: 10.1007/s10858-008-9274-y
-
(2008)
J Biomol NMR
, vol.42
, pp. 143-148
-
-
Abraham, S.J.1
Hoheisel, S.2
Gaponenko, V.3
-
2
-
-
0041353145
-
Structure and mechanism of the lactose permease of Escherichia coli
-
Abramson J, Smirnova I, Kasho V, Verner G, Kaback HR, Iwata S (2003) Structure and mechanism of the lactose permease of Escherichia coli. Science 301:610-615
-
(2003)
Science
, vol.301
, pp. 610-615
-
-
Abramson, J.1
Smirnova, I.2
Kasho, V.3
Verner, G.4
Kaback, H.R.5
Iwata, S.6
-
4
-
-
77953808359
-
CLC channels and transporters: Proteins with borderline personalities
-
Accardi A, Picollo A (2010) CLC channels and transporters: proteins with borderline personalities. Biochim Biophys Acta 1798:1457-1464. doi: 10.1016/j.bbamem.2010.02.022
-
(2010)
Biochim Biophys Acta
, vol.1798
, pp. 1457-1464
-
-
Accardi, A.1
Picollo, A.2
-
7
-
-
33748798473
-
Synergism between halide binding and proton transport in a CLC-type exchanger
-
Accardi A, Lobet S, Williams C, Miller C, Dutzler R (2006) Synergism between halide binding and proton transport in a CLC-type exchanger. J Mol Biol 362:691-699
-
(2006)
J Mol Biol
, vol.362
, pp. 691-699
-
-
Accardi, A.1
Lobet, S.2
Williams, C.3
Miller, C.4
Dutzler, R.5
-
8
-
-
84902107617
-
Conformational changes required for H(+)/Cl(-) exchange mediated by a CLC transporter
-
Basilio D, Noack K, Picollo A, Accardi A (2014) Conformational changes required for H(+)/Cl(-) exchange mediated by a CLC transporter. Nat Struct Mol Biol 21:456-463. doi: 10.1038/nsmb.2814
-
(2014)
Nat Struct Mol Biol
, vol.21
, pp. 456-463
-
-
Basilio, D.1
Noack, K.2
Picollo, A.3
Accardi, A.4
-
9
-
-
0029665692
-
Interlobe communication in 13C-methionine-labeled human transferrin
-
Beatty EJ et al (1996) Interlobe communication in 13C-methionine-labeled human transferrin. Biochemistry 35:7635-7642. doi: 10.1021/bi960684g
-
(1996)
Biochemistry
, vol.35
, pp. 7635-7642
-
-
Beatty, E.J.1
-
10
-
-
33744950592
-
Site-directed fluorescence studies of a prokaryotic ClC antiporter
-
Bell SP, Curran PK, Choi S, Mindell JA (2006) Site-directed fluorescence studies of a prokaryotic ClC antiporter. Biochemistry 45:6773-6782
-
(2006)
Biochemistry
, vol.45
, pp. 6773-6782
-
-
Bell, S.P.1
Curran, P.K.2
Choi, S.3
Mindell, J.A.4
-
11
-
-
73849149844
-
Ligand-specific regulation of the extracellular surface of a G-protein-coupled receptor
-
Bokoch MP et al (2010) Ligand-specific regulation of the extracellular surface of a G-protein-coupled receptor. Nature 463:108-112. doi: 10.1038/nature08650
-
(2010)
Nature
, vol.463
, pp. 108-112
-
-
Bokoch, M.P.1
-
12
-
-
0032483515
-
Changes in steady-state conformational equilibrium resulting from cytoplasmic mutations of the Na, K-ATPase alpha-subunit
-
Boxenbaum N, Daly SE, Javaid ZZ, Lane LK, Blostein R (1998) Changes in steady-state conformational equilibrium resulting from cytoplasmic mutations of the Na, K-ATPase alpha-subunit. J Biol Chem 273:23086-23092
-
(1998)
J Biol Chem
, vol.273
, pp. 23086-23092
-
-
Boxenbaum, N.1
Daly, S.E.2
Javaid, Z.Z.3
Lane, L.K.4
Blostein, R.5
-
13
-
-
0036792118
-
Evolution of amino acid frequencies in proteins over deep time: Inferred order of introduction of amino acids into the genetic code
-
Brooks DJ, Fresco JR, Lesk AM, Singh M (2002) Evolution of amino acid frequencies in proteins over deep time: inferred order of introduction of amino acids into the genetic code. Mol Biol Evol 19:1645-1655
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1645-1655
-
-
Brooks, D.J.1
Fresco, J.R.2
Lesk, A.M.3
Singh, M.4
-
14
-
-
77956490320
-
Conformational dependence of 13C shielding and coupling constants for methionine methyl groups
-
Butterfoss GL et al (2010) Conformational dependence of 13C shielding and coupling constants for methionine methyl groups. J Biomol NMR 48:31-47. doi: 10.1007/s10858-010-9436-6
-
(2010)
J Biomol NMR
, vol.48
, pp. 31-47
-
-
Butterfoss, G.L.1
-
15
-
-
84879628975
-
Application of reductive (1)(3)C-methylation of lysines to enhance the sensitivity of conventional NMR methods
-
Chavan TS, Abraham S, Gaponenko V (2013) Application of reductive (1)(3)C-methylation of lysines to enhance the sensitivity of conventional NMR methods. Molecules 18:7103-7119. doi: 10.3390/molecules18067103
-
(2013)
Molecules
, vol.18
, pp. 7103-7119
-
-
Chavan, T.S.1
Abraham, S.2
Gaponenko, V.3
-
16
-
-
84881106990
-
Molecular mechanism of the Escherichia coli maltose transporter
-
Chen J (2013) Molecular mechanism of the Escherichia coli maltose transporter. Curr Opin Struct Biol 23:492-498. doi: 10.1016/j.sbi.2013.03.011
-
(2013)
Curr Opin Struct Biol
, vol.23
, pp. 492-498
-
-
Chen, J.1
-
17
-
-
42049096734
-
CLC-0 and CFTR: Chloride channels evolved from transporters
-
Chen TY, Hwang TC (2008) CLC-0 and CFTR: chloride channels evolved from transporters. Physiol Rev 88:351-387. doi: 10.1152/physrev.00058.2006
-
(2008)
Physiol Rev
, vol.88
, pp. 351-387
-
-
Chen, T.Y.1
Hwang, T.C.2
-
18
-
-
84884873854
-
19F NMR: A valuable tool for studying biological events
-
Chen H, Viel S, Ziarelli F, Peng L (2013) 19F NMR: a valuable tool for studying biological events. Chem Soc Rev 42:7971-7982. doi: 10.1039/c3cs60129c
-
(2013)
Chem Soc Rev
, vol.42
, pp. 7971-7982
-
-
Chen, H.1
Viel, S.2
Ziarelli, F.3
Peng, L.4
-
19
-
-
84858758947
-
- and water transport through a eukaryotic CLC transporter
-
- and water transport through a eukaryotic CLC transporter. Biophys J 102:1363-1371. doi: 10.1016/j.bpj.2012.01.056
-
(2012)
Biophys J
, vol.102
, pp. 1363-1371
-
-
Cheng, M.H.1
Coalson, R.D.2
-
20
-
-
77954383579
-
Ion/substrate-dependent conformational dynamics of a bacterial homolog of neurotransmitter:sodium symporters
-
Claxton DP, Quick M, Shi L, de Carvalho FD, Weinstein H, Javitch JA, McHaourab HS (2010) Ion/substrate-dependent conformational dynamics of a bacterial homolog of neurotransmitter:sodium symporters. Nat Struct Mol Biol 17:822-829. doi: 10.1038/nsmb.1854
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 822-829
-
-
Claxton, D.P.1
Quick, M.2
Shi, L.3
De Carvalho, F.D.4
Weinstein, H.5
Javitch, J.A.6
McHaourab, H.S.7
-
21
-
-
0029665619
-
Use of 19F NMR to probe protein structure and conformational changes
-
Danielson MA, Falke JJ (1996) Use of 19F NMR to probe protein structure and conformational changes. Annu Rev Biophys Biomol Struct 25:163-195
-
(1996)
Annu Rev Biophys Biomol Struct
, vol.25
, pp. 163-195
-
-
Danielson, M.A.1
Falke, J.J.2
-
22
-
-
34548844740
-
NMR analysis of [methyl-13C]methionine UvrB from Bacillus caldotenax reveals UvrB-domain 4 heterodimer formation in solution
-
DellaVecchia MJ et al (2007) NMR analysis of [methyl-13C]methionine UvrB from Bacillus caldotenax reveals UvrB-domain 4 heterodimer formation in solution. J Mol Biol 373:282-295. doi: 10.1016/j.jmb.2007.07.045
-
(2007)
J Mol Biol
, vol.373
, pp. 282-295
-
-
Dellavecchia, M.J.1
-
24
-
-
33746641711
-
The ClC family of chloride channels and transporters
-
Dutzler R (2006) The ClC family of chloride channels and transporters. Curr Opin Struct Biol 16:439-446
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 439-446
-
-
Dutzler, R.1
-
25
-
-
0037122805
-
X-ray structure of a ClC chloride channel at 3.0 reveals the molecular basis of anion selectivity
-
Dutzler R, Campbell EB, Cadene M, Chait BT, MacKinnon R (2002) X-ray structure of a ClC chloride channel at 3.0 reveals the molecular basis of anion selectivity. Nature 415:287-294
-
(2002)
Nature
, vol.415
, pp. 287-294
-
-
Dutzler, R.1
Campbell, E.B.2
Cadene, M.3
Chait, B.T.4
MacKinnon, R.5
-
26
-
-
0037418859
-
Gating the selectivity filter in ClC chloride channels
-
Dutzler R, Campbell EB, MacKinnon R (2003) Gating the selectivity filter in ClC chloride channels. Science 300:108-112
-
(2003)
Science
, vol.300
, pp. 108-112
-
-
Dutzler, R.1
Campbell, E.B.2
MacKinnon, R.3
-
27
-
-
70350304561
-
Substrate-driven conformational changes in ClC-ec1 observed by fluorine NMR
-
Elvington SM, Liu CW, Maduke MC (2009) Substrate-driven conformational changes in ClC-ec1 observed by fluorine NMR. EMBO J 28:3090-3102
-
(2009)
EMBO J
, vol.28
, pp. 3090-3102
-
-
Elvington, S.M.1
Liu, C.W.2
Maduke, M.C.3
-
28
-
-
22244489419
-
Cysteine accessibility in ClC-0 supports conservation of the ClC intracellular vestibule
-
Engh AM, Maduke M (2005) Cysteine accessibility in ClC-0 supports conservation of the ClC intracellular vestibule. J Gen Physiol 125:601-617
-
(2005)
J Gen Physiol
, vol.125
, pp. 601-617
-
-
Engh, A.M.1
Maduke, M.2
-
29
-
-
34748824381
-
The role of a conserved lysine in chloride- and voltage-dependent ClC-0 fast gating
-
Engh AM, Faraldo-Gomez JD, Maduke M (2007) The role of a conserved lysine in chloride- and voltage-dependent ClC-0 fast gating. J Gen Physiol 130:351-363
-
(2007)
J Gen Physiol
, vol.130
, pp. 351-363
-
-
Engh, A.M.1
Faraldo-Gomez, J.D.2
Maduke, M.3
-
30
-
-
2542437774
-
Electrostatics of ion stabilization in a ClC chloride channel homologue from Escherichia coli
-
Faraldo-Gomez JD, Roux B (2004) Electrostatics of ion stabilization in a ClC chloride channel homologue from Escherichia coli. J Mol Biol 339:981-1000. doi: 10.1016/j.jmb.2004.04.023
-
(2004)
J Mol Biol
, vol.339
, pp. 981-1000
-
-
Faraldo-Gomez, J.D.1
Roux, B.2
-
31
-
-
78049362741
-
Structure of a eukaryotic CLC transporter defines an intermediate state in the transport cycle
-
Feng L, Campbell EB, Hsiung Y, MacKinnon R (2010) Structure of a eukaryotic CLC transporter defines an intermediate state in the transport cycle. Science 330:635-641. doi: 10.1126/science.1195230
-
(2010)
Science
, vol.330
, pp. 635-641
-
-
Feng, L.1
Campbell, E.B.2
Hsiung, Y.3
MacKinnon, R.4
-
32
-
-
84877262325
-
Neurotransmitter transporters: Structure meets function
-
Focke PJ, Wang X, Larsson HP (2013) Neurotransmitter transporters: structure meets function. Structure 21:694-705. doi: 10.1016/j.str.2013.03.002
-
(2013)
Structure
, vol.21
, pp. 694-705
-
-
Focke, P.J.1
Wang, X.2
Larsson, H.P.3
-
33
-
-
73949083478
-
The rocking bundle: A mechanism for ion-coupled solute flux by symmetrical transporters
-
Forrest LR, Rudnick G (2009) The rocking bundle: a mechanism for ion-coupled solute flux by symmetrical transporters. Physiology 24:377-386. doi: 10.1152/physiol.00030.2009
-
(2009)
Physiology
, vol.24
, pp. 377-386
-
-
Forrest, L.R.1
Rudnick, G.2
-
34
-
-
78650297251
-
The structural basis of secondary active transport mechanisms
-
Forrest LR, Kramer R, Ziegler C (2011) The structural basis of secondary active transport mechanisms. Biochim Biophys Acta 1807:167-188. doi: 10.1016/j.bbabio.2010.10.014
-
(2011)
Biochim Biophys Acta
, vol.1807
, pp. 167-188
-
-
Forrest, L.R.1
Kramer, R.2
Ziegler, C.3
-
35
-
-
0020490394
-
Intramolecular interactions of amino groups in 13C reductively methylated hen egg-white lysozyme
-
Gerken TA, Jentoft JE, Jentoft N, Dearborn DG (1982) Intramolecular interactions of amino groups in 13C reductively methylated hen egg-white lysozyme. J Biol Chem 257:2894-2900
-
(1982)
J Biol Chem
, vol.257
, pp. 2894-2900
-
-
Gerken, T.A.1
Jentoft, J.E.2
Jentoft, N.3
Dearborn, D.G.4
-
36
-
-
0025254028
-
13C-NMR of Clostridium pasteurianum ferredoxin after reductive methylation of the amines using [13C]formaldehyde
-
Gluck M, Sweeney WV (1990) 13C-NMR of Clostridium pasteurianum ferredoxin after reductive methylation of the amines using [13C]formaldehyde. Biochim Biophys Acta 1038:146-151
-
(1990)
Biochim Biophys Acta
, vol.1038
, pp. 146-151
-
-
Gluck, M.1
Sweeney, W.V.2
-
38
-
-
34848888055
-
Structural determination of wild-type lactose permease
-
Guan L, Mirza O, Verner G, Iwata S, Kaback HR (2007) Structural determination of wild-type lactose permease. Proc Natl Acad Sci USA 104:15294-15298. doi: 10.1073/pnas.0707688104
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 15294-15298
-
-
Guan, L.1
Mirza, O.2
Verner, G.3
Iwata, S.4
Kaback, H.R.5
-
40
-
-
84873057637
-
Utilization of lysine (1)(3)C-methylation NMR for protein-protein interaction studies
-
Hattori Y et al (2013) Utilization of lysine (1)(3)C-methylation NMR for protein-protein interaction studies. J Biomol NMR 55:19-31. doi: 10.1007/s10858-012-9675-9
-
(2013)
J Biomol NMR
, vol.55
, pp. 19-31
-
-
Hattori, Y.1
-
41
-
-
37249032102
-
Dynamic personalities of proteins
-
Henzler-Wildman K, Kern D (2007) Dynamic personalities of proteins. Nature 450:964-972
-
(2007)
Nature
, vol.450
, pp. 964-972
-
-
Henzler-Wildman, K.1
Kern, D.2
-
42
-
-
0024286086
-
13C NMR studies of methylene and methine carbons of substrate bound to a 280,000-dalton protein, porphobilinogen synthase
-
Jaffe EK, Markham GD (1988) 13C NMR studies of methylene and methine carbons of substrate bound to a 280,000-dalton protein, porphobilinogen synthase. Biochemistry 27:4475-4481
-
(1988)
Biochemistry
, vol.27
, pp. 4475-4481
-
-
Jaffe, E.K.1
Markham, G.D.2
-
43
-
-
0014029736
-
Simple allosteric model for membrane pumps
-
Jardetzky O (1966) Simple allosteric model for membrane pumps. Nature 211:969-970
-
(1966)
Nature
, vol.211
, pp. 969-970
-
-
Jardetzky, O.1
-
46
-
-
20444419395
-
Structure and mechanism of the lactose permease
-
Kaback HR (2005) Structure and mechanism of the lactose permease. C R Biol 328:557-567. doi: 10.1016/j.crvi.2005.03.008
-
(2005)
C R Biol
, vol.328
, pp. 557-567
-
-
Kaback, H.R.1
-
47
-
-
84901758511
-
TROSY NMR with a 52 kDa sugar transport protein and the binding of a small-molecule inhibitor
-
Kalverda AP, Gowdy J, Thompson GS, Homans SW, Henderson PJ, Patching SG (2014) TROSY NMR with a 52 kDa sugar transport protein and the binding of a small-molecule inhibitor. Mol Membr Biol 31:131-140. doi: 10.3109/09687688.2014.911980
-
(2014)
Mol Membr Biol
, vol.31
, pp. 131-140
-
-
Kalverda, A.P.1
Gowdy, J.2
Thompson, G.S.3
Homans, S.W.4
Henderson, P.J.5
Patching, S.G.6
-
48
-
-
79960977911
-
Solution NMR study of integral membrane proteins
-
Kang C, Li Q (2011) Solution NMR study of integral membrane proteins. Curr Opin Chem Biol 15:560-569. doi: 10.1016/j.cbpa.2011.05.025
-
(2011)
Curr Opin Chem Biol
, vol.15
, pp. 560-569
-
-
Kang, C.1
Li, Q.2
-
50
-
-
60549097035
-
Alternating access in maltose transporter mediated by rigid-body rotations
-
Khare D, Oldham ML, Orelle C, Davidson AL, Chen J (2009) Alternating access in maltose transporter mediated by rigid-body rotations. Mol Cell 33:528-536. doi: 10.1016/j.molcel.2009.01.035
-
(2009)
Mol Cell
, vol.33
, pp. 528-536
-
-
Khare, D.1
Oldham, M.L.2
Orelle, C.3
Davidson, A.L.4
Chen, J.5
-
51
-
-
70349745154
-
Recent advances in the application of solution NMR spectroscopy to multi-span integral membrane proteins
-
Kim HJ, Howell SC, Van Horn WD, Jeon YH, Sanders CR (2009) Recent advances in the application of solution NMR spectroscopy to multi-span integral membrane proteins. Prog Nucl Magn Reson Spectrosc 55:335-360. doi: 10.1016/j.pnmrs.2009.07.002
-
(2009)
Prog Nucl Magn Reson Spectrosc
, vol.55
, pp. 335-360
-
-
Kim, H.J.1
Howell, S.C.2
Van Horn, W.D.3
Jeon, Y.H.4
Sanders, C.R.5
-
52
-
-
84857625337
-
Current applications of 19F NMR to studies of protein structure and dynamics
-
Kitevski-LeBlanc JL, Prosser RS (2012) Current applications of 19F NMR to studies of protein structure and dynamics. Prog Nucl Magn Reson Spectrosc 62:1-33. doi: 10.1016/j.pnmrs.2011.06.003
-
(2012)
Prog Nucl Magn Reson Spectrosc
, vol.62
, pp. 1-33
-
-
Kitevski-Leblanc, J.L.1
Prosser, R.S.2
-
53
-
-
77952766712
-
Secondary water pore formation for proton transport in a ClC exchanger revealed by an atomistic molecular-dynamics simulation
-
Ko YJ, Jo WH (2010) Secondary water pore formation for proton transport in a ClC exchanger revealed by an atomistic molecular-dynamics simulation. Biophys J 98:2163-2169. doi: 10.1016/j.bpj.2010.01.043
-
(2010)
Biophys J
, vol.98
, pp. 2163-2169
-
-
Ko, Y.J.1
Jo, W.H.2
-
54
-
-
84856225222
-
X-ray structures of LeuT in substrate-free outward-open and apo inward-open states
-
Krishnamurthy H, Gouaux E (2012) X-ray structures of LeuT in substrate-free outward-open and apo inward-open states. Nature 481:469-474. doi: 10.1038/nature10737
-
(2012)
Nature
, vol.481
, pp. 469-474
-
-
Krishnamurthy, H.1
Gouaux, E.2
-
55
-
-
84865396279
-
Partial least-squares functional mode analysis: Application to the membrane proteins AQP1, Aqy1, and CLC-ec1
-
Krivobokova T, Briones R, Hub JS, Munk A, de Groot BL (2012) Partial least-squares functional mode analysis: application to the membrane proteins AQP1, Aqy1, and CLC-ec1. Biophys J 103:786-796. doi: 10.1016/j.bpj.2012.07.022
-
(2012)
Biophys J
, vol.103
, pp. 786-796
-
-
Krivobokova, T.1
Briones, R.2
Hub, J.S.3
Munk, A.4
De Groot, B.L.5
-
56
-
-
34249897242
-
- stoichiometry in bacterial chloride transporters
-
- stoichiometry in bacterial chloride transporters. Proteins 68:26-33. doi: 10.1002/prot.21441
-
(2007)
Proteins
, vol.68
, pp. 26-33
-
-
Kuang, Z.1
Mahankali, U.2
Beck, T.L.3
-
57
-
-
84893445590
-
Structure of sugar-bound LacY
-
Kumar H, Kasho V, Smirnova I, Finer-Moore JS, Kaback HR, Stroud RM (2014) Structure of sugar-bound LacY. Proc Natl Acad Sci USA 111:1784-1788. doi: 10.1073/pnas.1324141111
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, pp. 1784-1788
-
-
Kumar, H.1
Kasho, V.2
Smirnova, I.3
Finer-Moore, J.S.4
Kaback, H.R.5
Stroud, R.M.6
-
58
-
-
0034726672
-
X-ray crystallographic analysis of pokeweed antiviral protein-II after reductive methylation of lysine residues
-
Kurinov IV, Mao C, Irvin JD, Uckun FM (2000) X-ray crystallographic analysis of pokeweed antiviral protein-II after reductive methylation of lysine residues. Biochem Biophys Res Commun 275:549-552. doi: 10.1006/bbrc.2000.3329
-
(2000)
Biochem Biophys Res Commun
, vol.275
, pp. 549-552
-
-
Kurinov, I.V.1
Mao, C.2
Irvin, J.D.3
Uckun, F.M.4
-
59
-
-
84868204024
-
Lysine methylation strategies for characterizing protein conformations by NMR
-
Larda ST, Bokoch MP, Evanics F, Prosser RS (2012) Lysine methylation strategies for characterizing protein conformations by NMR. J Biomol NMR 54:199-209. doi: 10.1007/s10858-012-9664-z
-
(2012)
J Biomol NMR
, vol.54
, pp. 199-209
-
-
Larda, S.T.1
Bokoch, M.P.2
Evanics, F.3
Prosser, R.S.4
-
60
-
-
53849119555
-
Ins and outs of major facilitator superfamily antiporters
-
Law CJ, Maloney PC, Wang DN (2008) Ins and outs of major facilitator superfamily antiporters. Annu Rev Microbiol 62:289-305. doi: 10.1146/annurev.micro.61.080706.093329
-
(2008)
Annu Rev Microbiol
, vol.62
, pp. 289-305
-
-
Law, C.J.1
Maloney, P.C.2
Wang, D.N.3
-
66
-
-
61449446545
-
Review. Proton-coupled gating in chloride channels
-
Lisal J, Maduke M (2009) Review. Proton-coupled gating in chloride channels. Philos Trans R Soc Lond B Biol Sci 364:181-187. doi: 10.1098/rstb.2008.0123
-
(2009)
Philos Trans R Soc Lond B Biol Sci
, vol.364
, pp. 181-187
-
-
Lisal, J.1
Maduke, M.2
-
67
-
-
0042206685
-
Substrate-induced conformational fit and headpiece closure in the Ca2 + ATPase (SERCA)
-
Ma H, Inesi G, Toyoshima C (2003) Substrate-induced conformational fit and headpiece closure in the Ca2 + ATPase (SERCA). J Biol Chem 278:28938-28943. doi: 10.1074/jbc.M304120200
-
(2003)
J Biol Chem
, vol.278
, pp. 28938-28943
-
-
Ma, H.1
Inesi, G.2
Toyoshima, C.3
-
68
-
-
0032692857
-
High-level expression, functional reconstitution, and quaternary structure of a prokaryotic ClC-type chloride channel
-
Maduke M, Pheasant DJ, Miller C (1999) High-level expression, functional reconstitution, and quaternary structure of a prokaryotic ClC-type chloride channel. J Gen Physiol 114:713-722
-
(1999)
J Gen Physiol
, vol.114
, pp. 713-722
-
-
Maduke, M.1
Pheasant, D.J.2
Miller, C.3
-
69
-
-
0033873930
-
A decade of CLC chloride channels: Structure, mechanism, and many unsettled questions
-
Maduke M, Miller C, Mindell JA (2000) A decade of CLC chloride channels: structure, mechanism, and many unsettled questions. Annu Rev Biophys Biomol Struct 29:411-438
-
(2000)
Annu Rev Biophys Biomol Struct
, vol.29
, pp. 411-438
-
-
Maduke, M.1
Miller, C.2
Mindell, J.A.3
-
70
-
-
84883171052
-
+antiporter NhaA from Escherichia coli
-
+antiporter NhaA from Escherichia coli. J Biol Chem 288:24666-24675. doi: 10.1074/jbc.M113.484071
-
(2013)
J Biol Chem
, vol.288
, pp. 24666-24675
-
-
Mager, T.1
-
71
-
-
84882400833
-
NMR spectroscopy of soluble protein complexes at one mega-dalton and beyond
-
Mainz A, Religa TL, Sprangers R, Linser R, Kay LE, Reif B (2013) NMR spectroscopy of soluble protein complexes at one mega-dalton and beyond. Angew Chem Int Ed Engl 52:8746-8751. doi: 10.1002/anie.201301215
-
(2013)
Angew Chem Int Ed Engl
, vol.52
, pp. 8746-8751
-
-
Mainz, A.1
Religa, T.L.2
Sprangers, R.3
Linser, R.4
Kay, L.E.5
Reif, B.6
-
72
-
-
0034093293
-
Substrate-induced exposure of an energy-coupling motif of a membrane transporter
-
Merianos HJ, Cadieux N, Lin CH, Kadner RJ, Cafiso DS (2000) Substrate-induced exposure of an energy-coupling motif of a membrane transporter. Nat Struct Biol 7:205-209. doi: 10.1038/73309
-
(2000)
Nat Struct Biol
, vol.7
, pp. 205-209
-
-
Merianos, H.J.1
Cadieux, N.2
Lin, C.H.3
Kadner, R.J.4
Cafiso, D.S.5
-
73
-
-
33645296826
-
ClC chloride channels viewed through a transporter lens
-
Miller C (2006) ClC chloride channels viewed through a transporter lens. Nature 440:484-489
-
(2006)
Nature
, vol.440
, pp. 484-489
-
-
Miller, C.1
-
74
-
-
84941600274
-
- channel"
-
- channel". J Physiol. doi: 10.1113/jphysiol.2014.286260
-
(2014)
J Physiol
-
-
Miller, C.1
-
76
-
-
77949623101
-
Antiport mechanism for Cl(-)/H(+) in ClC-ec1 from normal-mode analysis
-
Miloshevsky GV, Hassanein A, Jordan PC (2010) Antiport mechanism for Cl(-)/H(+) in ClC-ec1 from normal-mode analysis. Biophys J 98:999-1008. doi: 10.1016/j.bpj.2009.11.035
-
(2010)
Biophys J
, vol.98
, pp. 999-1008
-
-
Miloshevsky, G.V.1
Hassanein, A.2
Jordan, P.C.3
-
77
-
-
84857260144
-
Lysosomal acidification mechanisms
-
Mindell JA (2012) Lysosomal acidification mechanisms. Annu Rev Physiol 74:69-86. doi: 10.1146/annurev-physiol-012110-142317
-
(2012)
Annu Rev Physiol
, vol.74
, pp. 69-86
-
-
Mindell, J.A.1
-
78
-
-
84886061681
-
Investigation of lysine side chain interactions of interleukin-8 with heparin and other glycosaminoglycans studied by a methylation-NMR approach
-
Mobius K et al (2013) Investigation of lysine side chain interactions of interleukin-8 with heparin and other glycosaminoglycans studied by a methylation-NMR approach. Glycobiology 23:1260-1269. doi: 10.1093/glycob/cwt062
-
(2013)
Glycobiology
, vol.23
, pp. 1260-1269
-
-
Mobius, K.1
-
79
-
-
78049501839
-
Determination of membrane protein structures using solution and solid-state NMR
-
J.J. Lacapere (eds) 654 Springer New York
-
Montaville P, Jamin N (2010) Determination of membrane protein structures using solution and solid-state NMR. In: Lacapere JJ (ed) Membrane protein structure determination: methods and protocols, vol 654. Springer, New York, pp 261-282
-
(2010)
Membrane Protein Structure Determination: Methods and Protocols
, pp. 261-282
-
-
Montaville, P.1
Jamin, N.2
-
81
-
-
36549018568
-
Crystal structure of a catalytic intermediate of the maltose transporter
-
Oldham ML, Khare D, Quiocho FA, Davidson AL, Chen J (2007) Crystal structure of a catalytic intermediate of the maltose transporter. Nature 450:515-521. doi: 10.1038/nature06264
-
(2007)
Nature
, vol.450
, pp. 515-521
-
-
Oldham, M.L.1
Khare, D.2
Quiocho, F.A.3
Davidson, A.L.4
Chen, J.5
-
83
-
-
58149302956
-
Insights into the ClC-4 transport mechanism from studies of Zn2 + inhibition
-
Osteen JD, Mindell JA (2008) Insights into the ClC-4 transport mechanism from studies of Zn2 + inhibition. Biophys J 95:4668-4675
-
(2008)
Biophys J
, vol.95
, pp. 4668-4675
-
-
Osteen, J.D.1
Mindell, J.A.2
-
84
-
-
0037270065
-
Improved methods of cultivation and production of deuteriated proteins from E. Coli strains grown on fully deuteriated minimal medium
-
Paliy O, Bloor D, Brockwell D, Gilbert P, Barber J (2003) Improved methods of cultivation and production of deuteriated proteins from E. coli strains grown on fully deuteriated minimal medium. J Appl Microbiol 94:580-586
-
(2003)
J Appl Microbiol
, vol.94
, pp. 580-586
-
-
Paliy, O.1
Bloor, D.2
Brockwell, D.3
Gilbert, P.4
Barber, J.5
-
85
-
-
22944475536
-
Chloride/proton antiporter activity of mammalian CLC proteins ClC-4 and ClC-5
-
Picollo A, Pusch M (2005) Chloride/proton antiporter activity of mammalian CLC proteins ClC-4 and ClC-5. Nature 436:420-423
-
(2005)
Nature
, vol.436
, pp. 420-423
-
-
Picollo, A.1
Pusch, M.2
-
86
-
-
84860739823
-
Synergistic substrate binding determines the stoichiometry of transport of a prokaryotic H(+)/Cl(-) exchanger
-
Picollo A, Xu Y, Johner N, Berneche S, Accardi A (2012) Synergistic substrate binding determines the stoichiometry of transport of a prokaryotic H(+)/Cl(-) exchanger. Nat Struct Mol Biol 19(525-531):S521. doi: 10.1038/nsmb.2277
-
(2012)
Nat Struct Mol Biol
, vol.19
, Issue.525-531
, pp. 521
-
-
Picollo, A.1
Xu, Y.2
Johner, N.3
Berneche, S.4
Accardi, A.5
-
87
-
-
0031053054
-
Reductive alkylation of lysine residues to alter crystallization properties of proteins
-
Rayment I (1997) Reductive alkylation of lysine residues to alter crystallization properties of proteins. Methods Enzymol 276:171-179
-
(1997)
Methods Enzymol
, vol.276
, pp. 171-179
-
-
Rayment, I.1
-
88
-
-
77954717665
-
Optimal methyl labeling for studies of supra-molecular systems
-
Religa TL, Kay LE (2010) Optimal methyl labeling for studies of supra-molecular systems. J Biomol NMR 47:163-169. doi: 10.1007/s10858-010-9419-7
-
(2010)
J Biomol NMR
, vol.47
, pp. 163-169
-
-
Religa, T.L.1
Kay, L.E.2
-
89
-
-
77950497745
-
Dynamic regulation of archaeal proteasome gate opening as studied by TROSY NMR
-
Religa TL, Sprangers R, Kay LE (2010) Dynamic regulation of archaeal proteasome gate opening as studied by TROSY NMR. Science 328:98-102. doi: 10.1126/science.1184991
-
(2010)
Science
, vol.328
, pp. 98-102
-
-
Religa, T.L.1
Sprangers, R.2
Kay, L.E.3
-
90
-
-
79958789586
-
Site-directed methyl group labeling as an NMR probe of structure and dynamics in supramolecular protein systems: Applications to the proteasome and to the ClpP protease
-
Religa TL, Ruschak AM, Rosenzweig R, Kay LE (2011) Site-directed methyl group labeling as an NMR probe of structure and dynamics in supramolecular protein systems: applications to the proteasome and to the ClpP protease. J Am Chem Soc 133:9063-9068. doi: 10.1021/ja202259a
-
(2011)
J Am Chem Soc
, vol.133
, pp. 9063-9068
-
-
Religa, T.L.1
Ruschak, A.M.2
Rosenzweig, R.3
Kay, L.E.4
-
91
-
-
84908084088
-
Review of methods to assign the nuclear magnetic resonance peaks of reductively methylated proteins
-
Roberson KJ, Macnaughtan MA (2014) Review of methods to assign the nuclear magnetic resonance peaks of reductively methylated proteins. Anal Biochem 466C:76-82. doi: 10.1016/j.ab.2014.08.024
-
(2014)
Anal Biochem
, vol.466
, pp. 76-82
-
-
Roberson, K.J.1
MacNaughtan, M.A.2
-
92
-
-
78650171241
-
Design, function and structure of a monomeric ClC transporter
-
Robertson JL, Kolmakova-Partensky L, Miller C (2010) Design, function and structure of a monomeric ClC transporter. Nature 468:844-847. doi: 10.1038/nature09556
-
(2010)
Nature
, vol.468
, pp. 844-847
-
-
Robertson, J.L.1
Kolmakova-Partensky, L.2
Miller, C.3
-
93
-
-
84902209981
-
Bringing dynamic molecular machines into focus by methyl-TROSY NMR
-
Rosenzweig R, Kay LE (2014) Bringing dynamic molecular machines into focus by methyl-TROSY NMR. Annu Rev Biochem 83:291-315
-
(2014)
Annu Rev Biochem
, vol.83
, pp. 291-315
-
-
Rosenzweig, R.1
Kay, L.E.2
-
94
-
-
0027482860
-
Structural consequences of reductive methylation of lysine residues in hen egg white lysozyme: An X-ray analysis at 1.8-A resolution
-
Rypniewski WR, Holden HM, Rayment I (1993) Structural consequences of reductive methylation of lysine residues in hen egg white lysozyme: an X-ray analysis at 1.8-A resolution. Biochemistry (Mosc) 32:9851-9858
-
(1993)
Biochemistry (Mosc)
, vol.32
, pp. 9851-9858
-
-
Rypniewski, W.R.1
Holden, H.M.2
Rayment, I.3
-
96
-
-
33746217557
-
Solution NMR of membrane proteins: Practice and challenges
-
Spec No
-
Sanders CR, Sonnichsen F (2006) Solution NMR of membrane proteins: practice and challenges. Magn Reson Chem: MRC 44 Spec No:S24-S40 doi: 10.1002/mrc.1816
-
(2006)
Magn Reson Chem: MRC 44
, pp. S24-S40
-
-
Sanders, C.R.1
Sonnichsen, F.2
-
97
-
-
22944479662
-
Voltage-dependent electrogenic chloride/proton exchange by endosomal CLC proteins
-
Scheel O, Zdebik AA, Lourdel S, Jentsch TJ (2005) Voltage-dependent electrogenic chloride/proton exchange by endosomal CLC proteins. Nature 436:424-427
-
(2005)
Nature
, vol.436
, pp. 424-427
-
-
Scheel, O.1
Zdebik, A.A.2
Lourdel, S.3
Jentsch, T.J.4
-
98
-
-
84874249804
-
Common folds and transport mechanisms of secondary active transporters
-
Shi Y (2013) Common folds and transport mechanisms of secondary active transporters. Annu Rev Biophys 42:51-72. doi: 10.1146/annurev-biophys-083012-130429
-
(2013)
Annu Rev Biophys
, vol.42
, pp. 51-72
-
-
Shi, Y.1
-
99
-
-
84892670970
-
Structural and mechanistic insights into prokaryotic energy-coupling factor transporters
-
Slotboom DJ (2014) Structural and mechanistic insights into prokaryotic energy-coupling factor transporters. Nat Rev Microbiol 12:79-87. doi: 10.1038/nrmicro3175
-
(2014)
Nat Rev Microbiol
, vol.12
, pp. 79-87
-
-
Slotboom, D.J.1
-
100
-
-
0016638276
-
Simple alkanethiol groups for temporary blocking of sulfhydryl groups of enzymes
-
Smith DJ, Maggio ET, Kenyon GL (1975) Simple alkanethiol groups for temporary blocking of sulfhydryl groups of enzymes. Biochemistry 14:766-771
-
(1975)
Biochemistry
, vol.14
, pp. 766-771
-
-
Smith, D.J.1
Maggio, E.T.2
Kenyon, G.L.3
-
101
-
-
84868129315
-
Cell biology and physiology of CLC chloride channels and transporters
-
Stauber T, Weinert S, Jentsch TJ (2012) Cell biology and physiology of CLC chloride channels and transporters. Compr Physiol 2:1701-1744. doi: 10.1002/cphy.c110038
-
(2012)
Compr Physiol
, vol.2
, pp. 1701-1744
-
-
Stauber, T.1
Weinert, S.2
Jentsch, T.J.3
-
102
-
-
0020669965
-
Mechanism of free energy coupling in active transport
-
Tanford C (1983) Mechanism of free energy coupling in active transport. Annu Rev Biochem 52:379-409. doi: 10.1146/annurev.bi.52.070183.002115
-
(1983)
Annu Rev Biochem
, vol.52
, pp. 379-409
-
-
Tanford, C.1
-
103
-
-
84862954608
-
Physiology and pathophysiology of CLC-1: Mechanisms of a chloride channel disease, myotonia
-
Tang CY, Chen TY (2011) Physiology and pathophysiology of CLC-1: mechanisms of a chloride channel disease, myotonia. J Biomed Biotechnol 2011:685328. doi: 10.1155/2011/685328
-
(2011)
J Biomed Biotechnol
, vol.2011
, pp. 685328
-
-
Tang, C.Y.1
Chen, T.Y.2
-
104
-
-
51749087029
-
A simple method for amino acid selective isotope labeling of recombinant proteins in E. Coli
-
Tong KI, Yamamoto M, Tanaka T (2008) A simple method for amino acid selective isotope labeling of recombinant proteins in E. coli. J Biomol NMR 42:59-67. doi: 10.1007/s10858-008-9264-0
-
(2008)
J Biomol NMR
, vol.42
, pp. 59-67
-
-
Tong, K.I.1
Yamamoto, M.2
Tanaka, T.3
-
105
-
-
0034079112
-
Selective constraints, amino acid composition, and the rate of protein evolution
-
Tourasse NJ, Li WH (2000) Selective constraints, amino acid composition, and the rate of protein evolution. Mol Biol Evol 17:656-664
-
(2000)
Mol Biol Evol
, vol.17
, pp. 656-664
-
-
Tourasse, N.J.1
Li, W.H.2
-
106
-
-
84870470187
-
Isotope labeling for solution and solid-state NMR spectroscopy of membrane proteins
-
Verardi R, Traaseth NJ, Masterson LR, Vostrikov VV, Veglia G (2012) Isotope labeling for solution and solid-state NMR spectroscopy of membrane proteins. Adv Exp Med Biol 992:35-62. doi: 10.1007/978-94-007-4954-2-3
-
(2012)
Adv Exp Med Biol
, vol.992
, pp. 35-62
-
-
Verardi, R.1
Traaseth, N.J.2
Masterson, L.R.3
Vostrikov, V.V.4
Veglia, G.5
-
107
-
-
84901049540
-
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters
-
Verdon G, Oh S, Serio RN, Boudker O (2014) Coupled ion binding and structural transitions along the transport cycle of glutamate transporters. Elife 3:e02283. doi: 10.7554/eLife.02283
-
(2014)
Elife
, vol.3
, pp. 02283
-
-
Verdon, G.1
Oh, S.2
Serio, R.N.3
Boudker, O.4
-
109
-
-
33846298499
-
Lysine methylation as a routine rescue strategy for protein crystallization
-
Walter TS et al (2006) Lysine methylation as a routine rescue strategy for protein crystallization. Structure 14:1617-1622. doi: 10.1016/j.str.2006.09.005
-
(2006)
Structure
, vol.14
, pp. 1617-1622
-
-
Walter, T.S.1
-
110
-
-
0027417905
-
Unnatural amino acid packing mutants of Escherichia coli thioredoxin produced by combined mutagenesis/chemical modification techniques
-
Wynn R, Richards FM (1993) Unnatural amino acid packing mutants of Escherichia coli thioredoxin produced by combined mutagenesis/chemical modification techniques. Protein Sci 2:395-403. doi: 10.1002/pro.5560020311
-
(1993)
Protein Sci
, vol.2
, pp. 395-403
-
-
Wynn, R.1
Richards, F.M.2
-
111
-
-
84921324831
-
A selective NMR probe to monitor the conformational transition from inactive to active kinase
-
Xie Q, Fulton DB, Andreotti AH (2014) A selective NMR probe to monitor the conformational transition from inactive to active kinase. ACS Chem Biol. doi: 10.1021/cb5004702
-
(2014)
ACS Chem Biol
-
-
Xie, Q.1
Fulton, D.B.2
Andreotti, A.H.3
-
112
-
-
84893140063
-
TROSY NMR spectroscopy of large soluble proteins
-
Xu Y, Matthews S (2013) TROSY NMR spectroscopy of large soluble proteins. Top Curr Chem 335:97-119. doi: 10.1007/128-2011-228
-
(2013)
Top Curr Chem
, vol.335
, pp. 97-119
-
-
Xu, Y.1
Matthews, S.2
-
113
-
-
84874258738
-
Structural advances for the major facilitator superfamily (MFS) transporters
-
Yan N (2013) Structural advances for the major facilitator superfamily (MFS) transporters. Trends Biochem Sci 38:151-159. doi: 10.1016/j.tibs.2013.01.003
-
(2013)
Trends Biochem Sci
, vol.38
, pp. 151-159
-
-
Yan, N.1
-
115
-
-
81255164758
-
The coupled proton transport in the ClC-ec1 Cl(-)/H(+) antiporter
-
Zhang Y, Voth GA (2011) The coupled proton transport in the ClC-ec1 Cl(-)/H(+) antiporter. Biophys J 101:L47-L49. doi: 10.1016/j.bpj.2011.10.021
-
(2011)
Biophys J
, vol.101
, pp. 47-L49
-
-
Zhang, Y.1
Voth, G.A.2
-
116
-
-
33645304847
-
Roles of K149, G352, and H401 in the channel functions of ClC-0: Testing the predictions from theoretical calculations
-
Zhang XD, Li Y, Yu WP, Chen TY (2006) Roles of K149, G352, and H401 in the channel functions of ClC-0: testing the predictions from theoretical calculations. J Gen Physiol 127:435-447
-
(2006)
J Gen Physiol
, vol.127
, pp. 435-447
-
-
Zhang, X.D.1
Li, Y.2
Yu, W.P.3
Chen, T.Y.4
-
117
-
-
79957935490
-
Substrate-modulated gating dynamics in a Na+ -coupled neurotransmitter transporter homologue
-
Zhao Y, Terry DS, Shi L, Quick M, Weinstein H, Blanchard SC, Javitch JA (2011) Substrate-modulated gating dynamics in a Na+ -coupled neurotransmitter transporter homologue. Nature 474:109-113. doi: 10.1038/nature09971
-
(2011)
Nature
, vol.474
, pp. 109-113
-
-
Zhao, Y.1
Terry, D.S.2
Shi, L.3
Quick, M.4
Weinstein, H.5
Blanchard, S.C.6
Javitch, J.A.7
-
118
-
-
34548852606
-
CLC chloride channels and transporters: A biophysical and physiological perspective
-
Zifarelli G, Pusch M (2007) CLC chloride channels and transporters: a biophysical and physiological perspective. Rev Physiol Biochem Pharmacol 158:23-76
-
(2007)
Rev Physiol Biochem Pharmacol
, vol.158
, pp. 23-76
-
-
Zifarelli, G.1
Pusch, M.2
|