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Volumn 68, Issue 1, 2007, Pages 26-33

Proton pathways and H+/C1- stoichiometry in bacterial chloride transporters

Author keywords

Electrostatics; Exchange mechanism; Ion channels; Transporters

Indexed keywords

AMINO ACID; BACTERIAL PROTEIN; CHLORIDE CHANNEL; CHLORIDE ION; GLUTAMIC ACID; PROTON; TYROSINE;

EID: 34249897242     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.21441     Document Type: Article
Times cited : (46)

References (49)
  • 1
    • 0021180163 scopus 로고
    • Dimeric structure of single chloride channels from Torpedo electroplax
    • Miller C, White MM. Dimeric structure of single chloride channels from Torpedo electroplax. Proc Natl Acad Sci USA 1984;81:2772-2775.
    • (1984) Proc Natl Acad Sci USA , vol.81 , pp. 2772-2775
    • Miller, C.1    White, M.M.2
  • 2
    • 0028102941 scopus 로고
    • Purification, reconstitution, and subunit composition of a voltage-gated chloride channel from Torpedo electroplax
    • Middleton RE, Pheasant DJ, Miller C. Purification, reconstitution, and subunit composition of a voltage-gated chloride channel from Torpedo electroplax. Biochemistry 1994;33:13189-13198.
    • (1994) Biochemistry , vol.33 , pp. 13189-13198
    • Middleton, R.E.1    Pheasant, D.J.2    Miller, C.3
  • 3
    • 0037122805 scopus 로고    scopus 로고
    • X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity
    • Dutzler R, Campbell EB, Cadene M, Chait BT, MacKinnon R. X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity. Nature 2002;415:287-294.
    • (2002) Nature , vol.415 , pp. 287-294
    • Dutzler, R.1    Campbell, E.B.2    Cadene, M.3    Chait, B.T.4    MacKinnon, R.5
  • 4
    • 4544302534 scopus 로고    scopus 로고
    • Ion transit pathways and gating in ClC chloride channels
    • Yin J, Kuang Z, Mahankali U, Beck TL. Ion transit pathways and gating in ClC chloride channels. Proteins 2004;57:414-421.
    • (2004) Proteins , vol.57 , pp. 414-421
    • Yin, J.1    Kuang, Z.2    Mahankali, U.3    Beck, T.L.4
  • 5
    • 0037418859 scopus 로고    scopus 로고
    • Gating the selectivity filter in ClC chloride channels
    • Dutzler R, Campbell EB, MacKinnon R. Gating the selectivity filter in ClC chloride channels. Science 2003;300:108-112.
    • (2003) Science , vol.300 , pp. 108-112
    • Dutzler, R.1    Campbell, E.B.2    MacKinnon, R.3
  • 6
    • 30444442312 scopus 로고    scopus 로고
    • Ion-binding properties of the ClC chloride selectivity filter
    • Lobet S, Dutzler R. Ion-binding properties of the ClC chloride selectivity filter. EMBO J 2006;25:24-33.
    • (2006) EMBO J , vol.25 , pp. 24-33
    • Lobet, S.1    Dutzler, R.2
  • 7
    • 0037544308 scopus 로고    scopus 로고
    • Molecular modeling of p-chlorophenoxyacetic acid binding to the CLC-0 channel
    • Moran O, Traverso S, Elia L, Pusch M. Molecular modeling of p-chlorophenoxyacetic acid binding to the CLC-0 channel. Biochemistry 2003;42:5176-5185.
    • (2003) Biochemistry , vol.42 , pp. 5176-5185
    • Moran, O.1    Traverso, S.2    Elia, L.3    Pusch, M.4
  • 8
    • 1142310688 scopus 로고    scopus 로고
    • Conduction mechanisms of chloride ions in ClC-type channels
    • Corry B, O'Mara M, Chung SH. Conduction mechanisms of chloride ions in ClC-type channels. Biophys J 2004;86:846-860.
    • (2004) Biophys J , vol.86 , pp. 846-860
    • Corry, B.1    O'Mara, M.2    Chung, S.H.3
  • 9
    • 15544388091 scopus 로고    scopus 로고
    • Structure and function of CLC channels
    • Chen TY. Structure and function of CLC channels. Annu Rev Physiol 2005;67:809-839.
    • (2005) Annu Rev Physiol , vol.67 , pp. 809-839
    • Chen, T.Y.1
  • 10
    • 33746641711 scopus 로고    scopus 로고
    • The ClC family of chloride channels and transporters
    • Dutzler R. The ClC family of chloride channels and transporters. Curr Opin Struct Biol 2006;16:439-446.
    • (2006) Curr Opin Struct Biol , vol.16 , pp. 439-446
    • Dutzler, R.1
  • 12
    • 23244438154 scopus 로고    scopus 로고
    • The fast gating mechanism in ClC-0 channels
    • Bisset D, Corry B, Chung SH. The fast gating mechanism in ClC-0 channels. Biophys J 2005;89:179-186.
    • (2005) Biophys J , vol.89 , pp. 179-186
    • Bisset, D.1    Corry, B.2    Chung, S.H.3
  • 14
    • 22944475536 scopus 로고    scopus 로고
    • Chloride/proton antiporter activity of mammalian CLC proteins ClC-4 and ClC-5
    • Picollo A, Pusch M. Chloride/proton antiporter activity of mammalian CLC proteins ClC-4 and ClC-5. Nature 2005;436:420-423.
    • (2005) Nature , vol.436 , pp. 420-423
    • Picollo, A.1    Pusch, M.2
  • 15
    • 22944479662 scopus 로고    scopus 로고
    • Voltage-dependent electrogenic chloride/proton exchange by endosomal CLC proteins
    • Scheel O, Zdebik AA, Lourdel S, Jentsch TJ. Voltage-dependent electrogenic chloride/proton exchange by endosomal CLC proteins. Nature 2005;436:424-427.
    • (2005) Nature , vol.436 , pp. 424-427
    • Scheel, O.1    Zdebik, A.A.2    Lourdel, S.3    Jentsch, T.J.4
  • 18
    • 33645296826 scopus 로고    scopus 로고
    • ClC chloride channels viewed through a transporter lens
    • Miller C. ClC chloride channels viewed through a transporter lens. Nature 2006;440:484-489.
    • (2006) Nature , vol.440 , pp. 484-489
    • Miller, C.1
  • 20
    • 1142291714 scopus 로고    scopus 로고
    • Mechanism of anionic conduction across CIC
    • Cohen J, Schulten K. Mechanism of anionic conduction across CIC. Biophys J 2004;86:836-845.
    • (2004) Biophys J , vol.86 , pp. 836-845
    • Cohen, J.1    Schulten, K.2
  • 21
    • 33746228476 scopus 로고    scopus 로고
    • Exploring the gating mechanism in the ClC chloride channel via metadynamics
    • Gervasio FL, Parrinello M, Ceccarelli M, Klein ML. Exploring the gating mechanism in the ClC chloride channel via metadynamics. J Mol Biol 2006;361:390-398.
    • (2006) J Mol Biol , vol.361 , pp. 390-398
    • Gervasio, F.L.1    Parrinello, M.2    Ceccarelli, M.3    Klein, M.L.4
  • 23
    • 4444366193 scopus 로고    scopus 로고
    • Exterior site occupancy infers chloride-induced proton gating in a prokaryotic homolog of the ClC chloride channel
    • Bostick DL, Berkowitz ML. Exterior site occupancy infers chloride-induced proton gating in a prokaryotic homolog of the ClC chloride channel. Biophys J 2004;87:1686-1696.
    • (2004) Biophys J , vol.87 , pp. 1686-1696
    • Bostick, D.L.1    Berkowitz, M.L.2
  • 24
    • 1142310684 scopus 로고    scopus 로고
    • - pores: Electrostatic effects of charged residues
    • - pores: electrostatic effects of charged residues. Biophys J 2004;86:825-835.
    • (2004) Biophys J , vol.86 , pp. 825-835
    • Miloshevsky, G.V.1    Jordan, P.C.2
  • 25
  • 26
    • 33644989063 scopus 로고    scopus 로고
    • Computer simulation of proton solvation and transport in aqueous and biomolecular systems
    • Voth GA. Computer simulation of proton solvation and transport in aqueous and biomolecular systems. Ace Chem Res 2006;39:143-150.
    • (2006) Ace Chem Res , vol.39 , pp. 143-150
    • Voth, G.A.1
  • 27
    • 0034336263 scopus 로고    scopus 로고
    • Real-space mesh techniques in density functional theory
    • Beck TL. Real-space mesh techniques in density functional theory. Rev Mod Phys 2000;72:1041-1080.
    • (2000) Rev Mod Phys , vol.72 , pp. 1041-1080
    • Beck, T.L.1
  • 28
    • 0344825877 scopus 로고    scopus 로고
    • What really prevents proton transport through aquaporin? Charge self-energy versus proton wire proposals
    • Burykin A, Warshel A. What really prevents proton transport through aquaporin? Charge self-energy versus proton wire proposals. Biophys J 2003;85:3696-3706.
    • (2003) Biophys J , vol.85 , pp. 3696-3706
    • Burykin, A.1    Warshel, A.2
  • 29
    • 33646170424 scopus 로고    scopus 로고
    • Origins of proton transport behavior from selectivity domain mutations of the aquaporin-1 channel
    • Chen H, Wu Y, Voth GA. Origins of proton transport behavior from selectivity domain mutations of the aquaporin-1 channel. Biophys J 2006;90:L73-L75.
    • (2006) Biophys J , vol.90
    • Chen, H.1    Wu, Y.2    Voth, G.A.3
  • 30
    • 84986512474 scopus 로고    scopus 로고
    • Brooks BR, Bruccoleri RE, Olafson BD, States DJ, Swaminathan S, Karplus M. CHARMM: a program for macromolecular energy, minimization, and dynamics calculations. J Comput Chem 1983;4:187-217.
    • Brooks BR, Bruccoleri RE, Olafson BD, States DJ, Swaminathan S, Karplus M. CHARMM: a program for macromolecular energy, minimization, and dynamics calculations. J Comput Chem 1983;4:187-217.
  • 31
    • 2542437774 scopus 로고    scopus 로고
    • Electrostatics of ion stabilization in a ClC chloride channel homologue from Escherichia coli
    • Faraldo-Gomez JD, Roux B. Electrostatics of ion stabilization in a ClC chloride channel homologue from Escherichia coli. J Mol Biol 2004;339:981-1000.
    • (2004) J Mol Biol , vol.339 , pp. 981-1000
    • Faraldo-Gomez, J.D.1    Roux, B.2
  • 33
    • 0029937870 scopus 로고    scopus 로고
    • Hydrophilicity of cavities in proteins
    • Zhang L, Hermans J. Hydrophilicity of cavities in proteins. Proteins 1996;24:433-438.
    • (1996) Proteins , vol.24 , pp. 433-438
    • Zhang, L.1    Hermans, J.2
  • 34
    • 33846823909 scopus 로고
    • An Nlog(N) method for Ewald sums in large systems
    • Darden TA, York DM, Pedersen LG. An Nlog(N) method for Ewald sums in large systems. J Chem Phys 1993;98:10089-10092.
    • (1993) J Chem Phys , vol.98 , pp. 10089-10092
    • Darden, T.A.1    York, D.M.2    Pedersen, L.G.3
  • 35
    • 4344660645 scopus 로고    scopus 로고
    • Overcoming free energy barriers using unconstrained molecular dynamics simulations
    • Henin J, Chipot C. Overcoming free energy barriers using unconstrained molecular dynamics simulations. J Chem Phys 2004; 121:2904-2914.
    • (2004) J Chem Phys , vol.121 , pp. 2904-2914
    • Henin, J.1    Chipot, C.2
  • 36
    • 0037379781 scopus 로고    scopus 로고
    • Voltage-gated proton channels and other proton transfer pathways
    • Decoursey TE. Voltage-gated proton channels and other proton transfer pathways. Physiol Rev 2003;83:475-579.
    • (2003) Physiol Rev , vol.83 , pp. 475-579
    • Decoursey, T.E.1
  • 37
    • 33745821170 scopus 로고    scopus 로고
    • Identification of tyrosine residues critical for the function of an ion-coupled multidrug transporter
    • Rotem D, Steiner-Mordoch S, Schuldiner S. Identification of tyrosine residues critical for the function of an ion-coupled multidrug transporter. J Biol Chem 2006;281:18715-18722.
    • (2006) J Biol Chem , vol.281 , pp. 18715-18722
    • Rotem, D.1    Steiner-Mordoch, S.2    Schuldiner, S.3
  • 38
    • 26844482366 scopus 로고    scopus 로고
    • +] interactions with the aromatic motifs of naturally occurring amino acids: A theoretical study
    • +] interactions with the aromatic motifs of naturally occurring amino acids: a theoretical study. J Phys Chem 2005;109:8893-8903.
    • (2005) J Phys Chem , vol.109 , pp. 8893-8903
    • Reddy, A.S.1    Sastry, G.N.2
  • 39
    • 85190572611 scopus 로고    scopus 로고
    • Dougherty DA. Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp. Science 1996;271:163-168.
    • Dougherty DA. Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp. Science 1996;271:163-168.
  • 41
    • 0345146920 scopus 로고    scopus 로고
    • Conservation of chloride channel structure revealed by an inhibitor binding site in ClC-1
    • Estevez R, Schroeder BC, Accardi A, Jentsch TJ, Pusch M. Conservation of chloride channel structure revealed by an inhibitor binding site in ClC-1. Neuron 2003;38:47-59.
    • (2003) Neuron , vol.38 , pp. 47-59
    • Estevez, R.1    Schroeder, B.C.2    Accardi, A.3    Jentsch, T.J.4    Pusch, M.5
  • 42
    • 0042377364 scopus 로고    scopus 로고
    • Side-chain charge effects and conductance determinants in the pore of ClC-0 chloride channels
    • Chen MF, Chen TY Side-chain charge effects and conductance determinants in the pore of ClC-0 chloride channels. J Gen Physiol 2003;122:133-145.
    • (2003) J Gen Physiol , vol.122 , pp. 133-145
    • Chen, M.F.1    Chen, T.Y.2
  • 43
    • 0034940574 scopus 로고    scopus 로고
    • Different fast-gate regulation by external Cl(-) and H(+) of the muscle-type CIC chloride channels
    • Chen MF, Chen TY. Different fast-gate regulation by external Cl(-) and H(+) of the muscle-type CIC chloride channels. J Gen Physiol 2001;118:23-32.
    • (2001) J Gen Physiol , vol.118 , pp. 23-32
    • Chen, M.F.1    Chen, T.Y.2
  • 44
    • 30144444316 scopus 로고    scopus 로고
    • Comment on ion transit pathways and gating in ClC chloride channels
    • Beck TL, Yin J, Kuang Z, Mahankali U, Feng G. Comment on ion transit pathways and gating in ClC chloride channels. Proteins 2006;62:553-554.
    • (2006) Proteins , vol.62 , pp. 553-554
    • Beck, T.L.1    Yin, J.2    Kuang, Z.3    Mahankali, U.4    Feng, G.5
  • 46
    • 84990990220 scopus 로고    scopus 로고
    • Hofmeister effects in membrane biology: The role of ionic dispersion potentials
    • Bostrom M, Williams DR, Stewart PR, Ninham BW. Hofmeister effects in membrane biology: the role of ionic dispersion potentials. Phys Rev 2003;68(4, Part 1):041902.
    • (2003) Phys Rev , vol.68 , Issue.4 and PART 1 , pp. 041902
    • Bostrom, M.1    Williams, D.R.2    Stewart, P.R.3    Ninham, B.W.4
  • 49
    • 33748798473 scopus 로고    scopus 로고
    • Synergism between halide binding and proton transport in a CLC-type exchanger
    • Accardi A, Lobet S, Williams C, Miller C, Dutzler R. Synergism between halide binding and proton transport in a CLC-type exchanger. J Mol Biol 2006;362:691-699.
    • (2006) J Mol Biol , vol.362 , pp. 691-699
    • Accardi, A.1    Lobet, S.2    Williams, C.3    Miller, C.4    Dutzler, R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.