메뉴 건너뛰기




Volumn 232, Issue 2, 2015, Pages 403-412

A transcriptomics-based hepatotoxicity comparison between the zebrafish embryo and established human and rodent in vitro and in vivo models using cyclosporine A, amiodarone and acetaminophen

Author keywords

Gene expression; Hepatotoxicity; Human in vitro; Mouse in vitro; Mouse in vivo; Rat in vitro; Rat in vivo; Zebrafish embryo

Indexed keywords

AMIODARONE; BILE ACID; CYCLOSPORIN A; GLUCOSE; LIPID; PARACETAMOL; ANALGESIC AGENT; ANTIARRHYTHMIC AGENT; CYCLOSPORIN; IMMUNOSUPPRESSIVE AGENT; TRANSCRIPTOME;

EID: 84919808056     PISSN: 03784274     EISSN: 18793169     Source Type: Journal    
DOI: 10.1016/j.toxlet.2014.11.020     Document Type: Article
Times cited : (57)

References (39)
  • 1
    • 54049150442 scopus 로고    scopus 로고
    • Molecular mechanisms and therapeutic targets in steatosis and steatohepatitis
    • Anderson N., Borlak J. Molecular mechanisms and therapeutic targets in steatosis and steatohepatitis. Pharmacol. Rev. 2008, 60:311-357. 10.1124/pr.108.00001.
    • (2008) Pharmacol. Rev. , vol.60 , pp. 311-357
    • Anderson, N.1    Borlak, J.2
  • 2
    • 76149092167 scopus 로고    scopus 로고
    • An in vitro assay to assess transporter-based cholestatic hepatotoxicity using sandwich-cultured rat hepatocytes
    • Ansede J.H., Smith W.R., Perry C.H., St Claire R.L., Brouwer K.R. An in vitro assay to assess transporter-based cholestatic hepatotoxicity using sandwich-cultured rat hepatocytes. Drug Metab. Dispos. Biol. Fate Chem. 2010, 38:276-280. 10.1124/dmd.109.028407.
    • (2010) Drug Metab. Dispos. Biol. Fate Chem. , vol.38 , pp. 276-280
    • Ansede, J.H.1    Smith, W.R.2    Perry, C.H.3    St Claire, R.L.4    Brouwer, K.R.5
  • 3
    • 0038172423 scopus 로고    scopus 로고
    • Gene expression in two hepatic cell lines, cultured primary hepatocytes, and liver slices compared to the in vivo liver gene expression in rats: possible implications for toxicogenomics use of in vitro systems
    • Boess F., Boess F., Kamber M., Kamber M., Romer S., Romer S., Gasser R., Muller D., Albertini S., Suter L. Gene expression in two hepatic cell lines, cultured primary hepatocytes, and liver slices compared to the in vivo liver gene expression in rats: possible implications for toxicogenomics use of in vitro systems. Toxicol. Sci. Off. J. Soc. Toxicol. 2003, 73:386-402. 10.1093/toxsci/kfg064.
    • (2003) Toxicol. Sci. Off. J. Soc. Toxicol. , vol.73 , pp. 386-402
    • Boess, F.1    Boess, F.2    Kamber, M.3    Kamber, M.4    Romer, S.5    Romer, S.6    Gasser, R.7    Muller, D.8    Albertini, S.9    Suter, L.10
  • 4
    • 0036256463 scopus 로고    scopus 로고
    • Mechanisms of hepatic transport of drugs: implications for cholestatic drug reactions
    • Bohan A., Boyer J.L. Mechanisms of hepatic transport of drugs: implications for cholestatic drug reactions. Semin. Liver Dis. 2002, 22:123-136. 10.1055/s-2002-30099.
    • (2002) Semin. Liver Dis. , vol.22 , pp. 123-136
    • Bohan, A.1    Boyer, J.L.2
  • 5
    • 23144463134 scopus 로고    scopus 로고
    • T-profiler: scoring the activity of predefined groups of genes using gene expression data
    • Boorsma A., Foat B.C., Vis D., Klis F., Bussemaker H.J. T-profiler: scoring the activity of predefined groups of genes using gene expression data. Nucl. Acids Res. 2005, 33:W592-W595. 10.1093/nar/gki484.
    • (2005) Nucl. Acids Res. , vol.33 , pp. W592-W595
    • Boorsma, A.1    Foat, B.C.2    Vis, D.3    Klis, F.4    Bussemaker, H.J.5
  • 7
    • 84919816762 scopus 로고    scopus 로고
    • ade4: Analysis of Ecological Data: Exploratory and Euclidean Methods in Multivariate Data Analysis and Graphical Display
    • R package version.
    • Chessel, D., Dufour, A.B., Dray, S., 2007. ade4: Analysis of Ecological Data: Exploratory and Euclidean Methods in Multivariate Data Analysis and Graphical Display. R package version.
    • (2007)
    • Chessel, D.1    Dufour, A.B.2    Dray, S.3
  • 10
    • 37649024043 scopus 로고    scopus 로고
    • The ade4 package: implementing the duality diagram for ecologists
    • Dray S., Dufour A.B. The ade4 package: implementing the duality diagram for ecologists. J. Stat. Softw. 2007, 22(4):1-20.
    • (2007) J. Stat. Softw. , vol.22 , Issue.4 , pp. 1-20
    • Dray, S.1    Dufour, A.B.2
  • 16
    • 84862937975 scopus 로고    scopus 로고
    • Comparisons between in vitro whole cell imaging and in vivo zebrafish-based approaches for identifying potential human hepatotoxicants earlier in pharmaceutical development
    • Hill A., Mesens N., Steemans M., Xu J.J., Aleo M.D. Comparisons between in vitro whole cell imaging and in vivo zebrafish-based approaches for identifying potential human hepatotoxicants earlier in pharmaceutical development. Drug Metab. Rev. 2012, 44:127-140. 10.3109/03602532.2011.645578.
    • (2012) Drug Metab. Rev. , vol.44 , pp. 127-140
    • Hill, A.1    Mesens, N.2    Steemans, M.3    Xu, J.J.4    Aleo, M.D.5
  • 19
    • 0043135016 scopus 로고    scopus 로고
    • The role of oxidant stress and reactive nitrogen species in acetaminophen hepatotoxicity
    • Jaeschke H., Knight T.R., Bajt M.L. The role of oxidant stress and reactive nitrogen species in acetaminophen hepatotoxicity. Toxicol. Lett. 2003, 144:279-288.
    • (2003) Toxicol. Lett. , vol.144 , pp. 279-288
    • Jaeschke, H.1    Knight, T.R.2    Bajt, M.L.3
  • 20
    • 84855892790 scopus 로고    scopus 로고
    • Oxidant stress, mitochondria, and cell death mechanisms in drug-induced liver injury: lessons learned from acetaminophen hepatotoxicity
    • Jaeschke H., McGill M.R., Ramachandran A. Oxidant stress, mitochondria, and cell death mechanisms in drug-induced liver injury: lessons learned from acetaminophen hepatotoxicity. Drug Metab. Rev. 2012, 44:88-106. 10.3109/03602532.2011.602688.
    • (2012) Drug Metab. Rev. , vol.44 , pp. 88-106
    • Jaeschke, H.1    McGill, M.R.2    Ramachandran, A.3
  • 21
    • 84862935985 scopus 로고    scopus 로고
    • Comparison between zebrafish and Hep G2 assays for the predictive identification of hepatotoxins
    • Jones M., Ball J.S., Dodd A., Hill A.J. Comparison between zebrafish and Hep G2 assays for the predictive identification of hepatotoxins. Toxicology 2009, 262(1):13-14. 10.1016/j.tox.2009.04.013.
    • (2009) Toxicology , vol.262 , Issue.1 , pp. 13-14
    • Jones, M.1    Ball, J.S.2    Dodd, A.3    Hill, A.J.4
  • 22
    • 84861198882 scopus 로고    scopus 로고
    • FXR and PXR: potential therapeutic targets in cholestasis
    • Jonker J.W., Liddle C., Downes M. FXR and PXR: potential therapeutic targets in cholestasis. J. Steroid Biochem. Mol. Biol. 2012, 130:147-158. 10.1016/j.jsbmb.2011.06.012.
    • (2012) J. Steroid Biochem. Mol. Biol. , vol.130 , pp. 147-158
    • Jonker, J.W.1    Liddle, C.2    Downes, M.3
  • 24
    • 84881262363 scopus 로고    scopus 로고
    • Cyclosporine A treated in vitro models induce cholestasis response through comparison of phenotype-directed gene expression analysis of in vivo cyclosporine A-induced cholestasis
    • Kienhuis A.S., Vitins A.P., Pennings J.L.A., Pronk T.E., Speksnijder E.N., Roodbergen M., van Delft J.H.M., Luijten M., van der Ven L.T.M. Cyclosporine A treated in vitro models induce cholestasis response through comparison of phenotype-directed gene expression analysis of in vivo cyclosporine A-induced cholestasis. Toxicol. Lett. 2013, 221:225-236. 10.1016/j.toxlet.2013.06.236.
    • (2013) Toxicol. Lett. , vol.221 , pp. 225-236
    • Kienhuis, A.S.1    Vitins, A.P.2    Pennings, J.L.A.3    Pronk, T.E.4    Speksnijder, E.N.5    Roodbergen, M.6    van Delft, J.H.M.7    Luijten, M.8    van der Ven, L.T.M.9
  • 25
    • 84888824428 scopus 로고    scopus 로고
    • Farnesoid X receptor up-regulates expression of lipid transfer inhibitor protein in liver cells and mice
    • Li L., Liu H., Peng J., Wang Y., Zhang Y., Dong J., Liu X., Guo D., Jiang Y. Farnesoid X receptor up-regulates expression of lipid transfer inhibitor protein in liver cells and mice. Biochem. Biophys. Res. Commun. 2013, 441:880-885. 10.1016/j.bbrc.2013.10.156.
    • (2013) Biochem. Biophys. Res. Commun. , vol.441 , pp. 880-885
    • Li, L.1    Liu, H.2    Peng, J.3    Wang, Y.4    Zhang, Y.5    Dong, J.6    Liu, X.7    Guo, D.8    Jiang, Y.9
  • 27
    • 84891804649 scopus 로고    scopus 로고
    • Database resources of the National Center for Biotechnology Information
    • NCBI Resource Coordinators Database resources of the National Center for Biotechnology Information. Nucl. Acids Res. 2014, 42:D7-17. 10.1093/nar/gkt1146.
    • (2014) Nucl. Acids Res. , vol.42 , pp. D7-17
    • NCBI Resource, Coordinators1
  • 28
    • 84865648962 scopus 로고    scopus 로고
    • Evaluation of DNA microarray results in the Toxicogenomics Project (TGP) consortium in Japan
    • Noriyuki N., Igarashi Y., Ono A., Yamada H., Ohno Y., Urushidani T. Evaluation of DNA microarray results in the Toxicogenomics Project (TGP) consortium in Japan. J. Toxicol. Sci. 2012, 37:791-801.
    • (2012) J. Toxicol. Sci. , vol.37 , pp. 791-801
    • Noriyuki, N.1    Igarashi, Y.2    Ono, A.3    Yamada, H.4    Ohno, Y.5    Urushidani, T.6
  • 29
    • 84855865117 scopus 로고    scopus 로고
    • Systematic approaches to toxicology in the zebrafish
    • Peterson R.T., Macrae C.A. Systematic approaches to toxicology in the zebrafish. Annu. Rev. Pharmacol. Toxicol. 2012, 52:433-453. 10.1146/annurev-pharmtox-010611-134751.
    • (2012) Annu. Rev. Pharmacol. Toxicol. , vol.52 , pp. 433-453
    • Peterson, R.T.1    Macrae, C.A.2
  • 31
    • 79955107544 scopus 로고    scopus 로고
    • Zebrafish for drug toxicity screening: bridging the in vitro cell-based models and in vivo mammalian models
    • Sukardi H., Chng H.T., Chan E.C.Y., Gong Z., Lam S.H. Zebrafish for drug toxicity screening: bridging the in vitro cell-based models and in vivo mammalian models. Expert Opin. Drug Metab. Toxicol. 2011, 7:579-589. 10.1517/17425255.2011.562197.
    • (2011) Expert Opin. Drug Metab. Toxicol. , vol.7 , pp. 579-589
    • Sukardi, H.1    Chng, H.T.2    Chan, E.C.Y.3    Gong, Z.4    Lam, S.H.5
  • 32
    • 84885096746 scopus 로고    scopus 로고
    • Treatment of mouse liver slices with cholestatic hepatotoxicants results in down-regulation of Fxr and its target genes
    • Szalowska E., Stoopen G., Groot M.J., Hendriksen P.J., Peijnenburg A.A. Treatment of mouse liver slices with cholestatic hepatotoxicants results in down-regulation of Fxr and its target genes. BMC Med. Genomics 2013, 6:39. 10.1186/1755-8794-6-39.
    • (2013) BMC Med. Genomics , vol.6 , pp. 39
    • Szalowska, E.1    Stoopen, G.2    Groot, M.J.3    Hendriksen, P.J.4    Peijnenburg, A.A.5
  • 33
    • 45849138843 scopus 로고    scopus 로고
    • Cytochrome P450 polymorphism - molecular, metabolic, and pharmacogenetic aspects. II. Participation of CYP isoenzymes in the metabolism of endogenous substances and drugs
    • Tomaszewski P., Kubiak-Tomaszewska G., Pachecka J. Cytochrome P450 polymorphism - molecular, metabolic, and pharmacogenetic aspects. II. Participation of CYP isoenzymes in the metabolism of endogenous substances and drugs. Acta Pol. Pharm. 2008, 65:307-318.
    • (2008) Acta Pol. Pharm. , vol.65 , pp. 307-318
    • Tomaszewski, P.1    Kubiak-Tomaszewska, G.2    Pachecka, J.3
  • 35
    • 84873381429 scopus 로고    scopus 로고
    • Screening for drug-induced hepatotoxicity in primary mouse hepatocytes using acetaminophen, amiodarone, and cyclosporin a as model compounds: an omics-guided approach
    • Van Summeren A., Renes J., Lizarraga D., Bouwman F.G., Noben J.-P., van Delft J.H.M., Kleinjans J.C.S., Mariman E.C.M. Screening for drug-induced hepatotoxicity in primary mouse hepatocytes using acetaminophen, amiodarone, and cyclosporin a as model compounds: an omics-guided approach. OMICS J. Integr. Biol. 2013, 17:71-83. 10.1089/omi.2012.0079.
    • (2013) OMICS J. Integr. Biol. , vol.17 , pp. 71-83
    • Van Summeren, A.1    Renes, J.2    Lizarraga, D.3    Bouwman, F.G.4    Noben, J.-P.5    van Delft, J.H.M.6    Kleinjans, J.C.S.7    Mariman, E.C.M.8
  • 36
    • 84904974110 scopus 로고    scopus 로고
    • Mechanisms of amiodarone and valproic acid induced liver steatosis in mouse in vivo act as a template for other hepatotoxicity models
    • Vitins A.P., Kienhuis A.S., Speksnijder E.N., Roodbergen M., Luijten M., van der Ven L.T.M. Mechanisms of amiodarone and valproic acid induced liver steatosis in mouse in vivo act as a template for other hepatotoxicity models. Arch. Toxicol. 2014, 1-16. 10.1007/s00204-014-1211-0.
    • (2014) Arch. Toxicol. , pp. 1-16
    • Vitins, A.P.1    Kienhuis, A.S.2    Speksnijder, E.N.3    Roodbergen, M.4    Luijten, M.5    van der Ven, L.T.M.6
  • 37
    • 68049131203 scopus 로고    scopus 로고
    • New molecular insights into the mechanisms of cholestasis
    • Wagner M., Zollner G., Trauner M. New molecular insights into the mechanisms of cholestasis. J. Hepatol. 2009, 51:565-580. 10.1016/j.jhep.2009.05.012.
    • (2009) J. Hepatol. , vol.51 , pp. 565-580
    • Wagner, M.1    Zollner, G.2    Trauner, M.3
  • 38
    • 84919816760 scopus 로고    scopus 로고
    • ggplot2: elegant graphics for data analysis.
    • Wickham, H., 2009. ggplot2: elegant graphics for data analysis.
    • (2009)
    • Wickham, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.