One day to one hour: How quickly can foodborne pathogens be detected?

Future Microbiology

Volumn 9, Issue 8, 2014, Pages 935-946

  Bhunia, Arun K ^a  

^a PURDUE UNIVERSITY   (United States)

Author keywords

detection; foodborne pathogen; high throughput screening; rapid

Indexed keywords

CULTURE TECHNIQUE; FIBER OPTIC BIOSENSOR; FIBER OPTICS; GENOME ANALYSIS; GOLD STANDARD; HIGH THROUGHPUT SCREENING; IMMUNOASSAY; LATERAL FLOW IMMUNOASSAY; LIGHT SCATTERING; MASS SPECTROMETRY; MICROORGANISM DETECTION; NANOSENSOR; NONHUMAN; NUCLEIC ACID AMPLIFICATION; PATHOGEN LOAD; POLYMERASE CHAIN REACTION; RAMAN SPECTROMETRY; RAPID TEST; REAL TIME POLYMERASE CHAIN REACTION; REVIEW; STRATEGIC PLANNING; BACTERIUM; DIAGNOSTIC KIT; FOOD CONTROL; GENETIC PROCEDURES; ISOLATION AND PURIFICATION; PROCEDURES; TIME;

DIAGNOSTIC KIT;

BACTERIA; BIOSENSING TECHNIQUES; FOOD MICROBIOLOGY; HIGH-THROUGHPUT SCREENING ASSAYS; NUCLEIC ACID AMPLIFICATION TECHNIQUES; REAGENT KITS, DIAGNOSTIC; TIME FACTORS;

EID: 84908050968     PISSN: 17460913     EISSN: 17460921     Source Type: Journal    
DOI: 10.2217/fmb.14.61     Document Type: Review

References (75)

1. Newell DG, Koopmans M, Verhoef L et al. Food-borne diseases-the challenges of 20 years ago still persist while new ones continue to emerge. Int. J. Food Microbiol. 139(Suppl. 1), S3-S15 (2010).
2. Scharff R. Economic burden from health losses due to foodborne illness in the United States. J. Food Prot. 75(1), 123-131 (2012).
3. Scallan E, Hoekstra RM, Angulo FJ et al. Foodborne illness acquired in the United States-major pathogens. Emerg. Infect. Dis. 17(1), 7-15 (2011).
4. Rodriguez-Lazaro D, Cook N, Ruggeri FM et al. Virus hazards from food, water and other contaminated environments. FEMS Microbiol. Rev. 36(4), 786-814 (2012).
5. Dorny P, Praet N, Deckers N, Gabriel S. Emerging food-borne parasites. Vet. Parasitol. 163(3), 196-206 (2009).
6. Stoev SD. Food safety and increasing hazard of mycotoxin occurrence in foods and feeds. Crit. Rev. Food Sci. Nutr. 53(9), 887-901 (2013).
7. Kalaitzis JA, Chau R, Kohli GS, Murray SA, Neilan BA. Biosynthesis of toxic naturally-occurring seafood contaminants. Toxicon 56(2), 244-258 (2010).
8. Thompson RCA, Owen IL, Puana I, Banks D, Davis TME, Reid SA. Parasites and biosecurity-the example of Australia. Trends Parasitol. 19(9), 410-416 (2003).
9. Broglia A, Kapel C. Changing dietary habits in a changing world: emerging drivers for the transmission of foodborne parasitic zoonoses. Vet. Parasitol. 182(1), 2-13 (2011).
10. Patyal A, Rathore RS, Mohan HV, Dhama K, Kumar A. Prevalence of Arcobacter spp. in humans, animals and foods of animal origin including sea food from India. Transboundary Emerg. Dis. 58(5), 402-410 (2011).
11. Pachepsky Y, Shelton DR, McLain JET, Patel J, Mandrel RE. Irrigation waters as a source of pathogenic microorganisms in produce: a review. Adv. Agronomy 113, 75-141 (2011).
12. Shapiro JT. Food Safety Modernization Act. Manufact. Confect. 93(6), 41-45 (2013).
13. U.S. Department of Health & Human Services/U.S. Food & Drug Administration. Background on the FDA Food Safety Modernization Act (FSMA). www.fda.gov/downloads/Food/GuidanceRegulation/UCM263773.pdf
14. National Advisory Committee on Microbiological Criteria For Foods. Response to questions posed by the food safety and inspection service regarding determination of the most appropriate technologies for the food safety and inspection service to adopt in performing routine and baseline microbiological analyses. J. Food Prot. 73(6), 1160-1200 (2010).
15. Velusamy V, Arshak K, Korostynska O, Oliwa K, Adley C. An overview of foodborne pathogen detection: in the perspective of biosensors. Biotechnol. Adv. 28(2), 232-254 (2010).
16. Nicolo MS, Gioffre A, Carnazza S, Platania G, Silvestro ID, Guglielmino SPP. Viable but nonculturable state of foodborne pathogens in grapefruit juice: a study of laboratory. Foodborne Pathog. Dis. 8(1), 11-17 (2011).
17. Dinu L-D, Bach S. Detection of viable but non-culturable Escherichia coli O157:H7 from vegetable samples using quantitative PCR with propidium monoazide and immunological assays. Food Control 31(2), 268-273 (2013).
18. Taskila S, Tuomola M, Ojamo H. Enrichment cultivation in detection of food-borne Salmonella. Food Control 26(2), 369-377 (2012).
19. Kim H, Bhunia AK. SEL, a selective enrichment broth for simultaneous growth of Salmonella enterica, Escherichia coli O 157: H 7, and Listeria monocytogenes. Appl. Environ. Microbiol. 74(15), 4853-4866 (2008).
20. Besse NG, Barre L, Buhariwalla C et al. The overgrowth of Listeria monocytogenes by other Listeria spp. in food samples undergoing enrichment cultivation has a nutritional basis. Int. J. Food Microbiol. 136 (3), 345-351 (2010).
21. Singh AK, Bettasso AM, Bae E et al. Laser optical sensor, a label-free on-plate Salmonella enterica colony detection tool. MBio 5(1), e 01019-13 (2014).
22. Brehm-Stecher B, Young C, Jaykus L-A, Tortorello ML. Sample preparation: the forgotten beginning. J. Food Prot. 72, 1774-1789 (2009).
23. Bhunia AK. Biosensors and bio-based methods for the separation and detection of foodborne pathogens. Adv. Food Nutr. Res. 54, 1-44 (2008).
24. Dwivedi HP, Jaykus L-A. Detection of pathogens in foods: the current state-of-the-art and future directions. Crit. Rev. Microbiol. 37(1), 40-63 (2011).
25. White PL, Archer AE, Barnes RA. Comparison of non-culture-based methods for detection of systemic fungal infections, with an emphasis on invasive Candida infections. J. Clin. Microbiol. 43(5), 2181-2187 (2005).
26. Zhang SX. Non-culture-based methods in diagnostic mycology. Clin. Microbiol. Newslett. 34 (13), 101-105 (2012).
27. Stals A, Van Coillie E, Uyttendaele M. Viral genes everywhere: public health implications of PCR-based testing of foods. Curr. Opin. Virol. 3(1), 69-73 (2013).
28. Katano H, Kano M, Nakamura T, Kanno T, Asanuma H, Sata T. A novel real-time PCR system for simultaneous detection of human viruses in clinical samples from patients with uncertain diagnoses. J. Med. Virol. 83(2), 322-330 (2011).
29. De Keuckelaere A, Stals A, Baert L, Uyttendaele M. Performance of two real-time RT-PCR assays for the quantifcation of GI and GII noroviruses and hepatitis A virus in environmental water samples. Food Anal. Meth. 6 (4), 1016-1023 (2013).
30. Gehring A, Barnett C, Chu T et al. A high-throughput antibody-based microarray typing platform. Sensors 13(5), 5737-5748 (2013).
31. Gehring AG, Albin DM, Bhunia AK, Kim H, Reed SA, Tu S-I. Mixed culture enrichment of Escherichia coli O 157: H 7, Listeria monocytogenes, Salmonella enterica, and Yersinia enterocolitica. Food Control 26(2), 269-273 (2012).
32. Yi-Gang Y, Hui W, Yuan-Yuan L, Su-Long L, Xiao-Quan Y, Xing-Long X. A multipathogen selective enrichment broth for simultaneous growth of Salmonella enterica serovar Enteritidis, Staphylococcus aureus, and Listeria monocytogenes. Can. J. Microbiol. 56(7), 585-597 (2010).
33. Koo OK, Aroonnual A, Bhunia AK. Human heat-shock protein 60 receptor-coated paramagnetic beads show improved capture of Listeria monocytogenes in the presence of other Listeria in food. J. Appl. Microbiol. 111(1), 93-104 (2011).
34. Hruskova L, Mot'kova P, Vytrasova J. Multiplex polymerase chain reaction using ethidium monoazide and propidium monoazide for distinguishing viable and dead cells of arcobacters in bioflm. Can. J. Microbiol. 59(12), 797-802 (2013).
35. Nkuipou-Kenfack E, Engel H, Fakih S, Nocker A. Improving effciency of viability-PCR for selective detection of live cells. J. Microbiol. Methods 93(1), 20-24 (2013).
36. Elizaquivel P, Aznar R, Sanchez G. Recent developments in the use of viability dyes and quantitative PCR in the food microbiology field. J. Appl. Microbiol. 116(1), 1-13 (2014).
37. Niessen L, Luo J, Denschlag C, Vogel RF. The application of loop-mediated isothermal amplifcation (LAMP) in food testing for bacterial pathogens and fungal contaminants. Food Microbiol. 36(2), 191-206 (2013).
38. Soli KW, Kas M, Maure T et al. Evaluation of colorimetric detection methods for Shigella, Salmonella, and Vibrio cholerae by loop-mediated isothermal amplifcation. Diag. Microbiol. Infect. Dis. 77(4), 321-323 (2013).
39. Boxrud D. Advances in subtyping methods of foodborne disease pathogens. Curr. Opin. Biotechnol. 21(2), 137-141 (2010).
40. Banada PP, Bhunia AK. Antibodies and immunoassays for detection of bacterial pathogens. In: Principles of Bacterial Detection: Biosensors, Recognition Receptors and Microsystems. Zourob M, Elwary S, Turner A (Eds). Cambridge University Press, Cambridge, UK, 567-602 (2008).
41. Anfossi L, Di Nardo F, Giovannoli C, Passini C, Baggiani C. Increased sensitivity of lateral fow immunoassay for ochratoxin A through silver enhancement. Anal. Bioanal. Chem. 405(30), 9859-9867 (2013).
42. Joung H-A, Oh YK, Kim M-G. An automatic enzyme immunoassay based on a chemiluminescent lateral fow immunosensor. Biosens. Bioelectron. 53, 330-335 (2014).
43. Sharma H, Mutharasan R. Review of biosensors for foodborne pathogens and toxins. Sens. Actuat. B Chem. 183, 535-549 (2013).
44. Bae E, Bhunia AK. Nano optical sensors for food safety and security. In: Optochemical Nanosensors. Cusano A, Arregui FJ, Giordano M, Cutolo A (Eds). CRC Press, FL, USA, 497-512 (2013).
45. Banerjee P, Bhunia AK. Mammalian cell-based biosensors for pathogens and toxins. Trends Biotechnol. 27(3), 179-188 (2009).
46. Koo OK, Liu Y, Shuaib S et al. Targeted capture of pathogenic bacteria using a mammalian cell receptor coupled with dielectrophoresis on a biochip. Anal. Chem. 81(8), 3094-3101 (2009).
47. Chambers JP, Arulanandam BP, Matta LL, Weis A, Valdes JJ. Biosensor recognition elements. Curr. Issues Mol. Biol. 10, 1-12 (2008).
48. Singh A, Arutyunov D, Szymanski CM, Evoy S. Bacteriophage based probes for pathogen detection. Analyst 137 (15), 3405-3421 (2012).
49. Piliarik M, Párová L, Homola J. High-throughput SPR sensor for food safety. Biosens. Bioelectron. 24(5), 1399-1404 (2009).
50. Jun W, Kim MS, Cho B-K, Millner PD, Chao K, Chan DE. Microbial bioflm detection on food contact surfaces by macro-scale fuorescence imaging. J. Food Eng. 99(3), 314-322 (2010).
51. Feng Y-Z, Sun D-W. Application of hyperspectral imaging in food safety inspection and control: a review. Crit. Rev. Food Sci. Nutr. 52(11), 1039-1058 (2012).
52. Bhunia AK. Rapid pathogen screening tools for food safety. Food Technol. 65(2), 38-43 (2011).
53. Gehring A, Tu SI. High-throughput biosensors for multiplexed food-borne pathogen detection. Annu. Rev. Anal. Chem. 4, 151-172 (2011).
54. Taitt CR, Anderson GP, Ligler FS. Evanescent wave fuorescence biosensors. Biosens. Bioelectron. 20(12), 2470-2487 (2005).
55. Ohk S-H, Bhunia AK. Multiplex fber optic biosensor for detection of Listeria monocytogenes, Escherichia coli O157:H7 and Salmonella enterica from ready-to-eat meat samples. Food Microbiol. 33(2), 166-171 (2013).
56. Wyatt PJ. Identifcation of bacteria by differential light scattering. Nature 221(5187), 1257-1969 (1969)
57. Bae E, Banada PP, Huff K, Bhunia AK, Robinson JP, Hirleman ED. Biophysical modeling of forward scattering from bacterial colonies using scalar diffraction theory. Appl. Opt. 46(17), 3639-3648 (2007).
58. Banada PP, Guo S, Bayraktar B et al. Optical forward-scattering for detection of Listeria monocytogenes and other Listeria species. Biosens. Bioelectron. 22 (8), 1664-1671 (2007).
59. Banada PP, Huff K, Bae E et al. Label-free detection of multiple bacterial pathogens using light-scattering sensor. Biosens. Bioelectron. 24, 1685-1692 (2009).
60. Huff K, Aroonnual A, Littlejohn AEF et al. Light-scattering sensor for real-time identifcation of Vibrio parahaemolyticus, Vibrio vulnifcus and Vibrio cholerae colonies on solid agar plate. Microb. Biotechnol. 5(5), 607-620 (2012).
61. Marazuela MD, Moreno-Bondi MC. Fiber-optic biosensors-an overview. Anal. Bioanal. Chem. 372(5-6), 664-682 (2002).
62. Taitt CR, Shriver-Lake LC, Ngundi MM, Ligler FS. Array biosensor for toxin detection: continued advances. Sensors 8(12), 8361-8377 (2008).
63. Homola J. Surface plasmon resonance sensors for detection of chemical and biological species. Chem. Rev. 108(2), 462-493 (2008).
64. Craig AP, Franca AS, Irudayaraj J. Surface-enhanced Raman spectroscopy applied to food safety. Annu. Rev. Food Sci. Technol. 4, 369-380 (2013).
65. Golightly RS, Doering WE, Natan MJ. Surface-enhanced Raman spectroscopy and homeland security: a perfect match? ACS Nano 3(10), 2859-2869 (2009).
66. Gowen AA, O'Donnell CP, Cullen PJ, Downey G, Frias JM. Hyperspectral imaging-an emerging process analytical tool for food quality and safety control. Trends Food Sci. Technol. 18(12), 590-598 (2007).
67. Yoon SC, Park B, Lawrence KC, Windham WR, Heitschmidt GW. Line-scan hyperspectral imaging system for real-time inspection of poultry carcasses with fecal material and ingesta. Computers Electron. Agri. 79(2), 159-168 (2011).
68. Elmasry G, Kamruzzaman M, Sun D-W, Allen P. Principles and applications of hyperspectral imaging in quality evaluation of agro-food products: a review. Crit. Rev. Food Sci. Nutr. 52(11), 999-1023 (2012).
69. Sandrin TR, Goldstein JE, Schumaker S. MALDI TOF MS profling of bacteria at the strain level: a review. Mass Spec. Rev. 32(3), 188-217 (2013).
70. Mandrell RE, Harden LA, Bates A, Miller WG, Haddon WF, Fagerquist CK. Speciation of Campylobacter coli, C. jejuni, C. helveticus, C. lari, C. sputorum, and C. upsaliensis by matrix-assisted laser desorption Ionization-time of fight mass spectrometry. Appl. Environ. Microbiol. 71(10), 6292-6307 (2005).
71. Dieckmann R, Malorny B. Rapid screening of epidemiologically important Salmonella enterica subsp enterica serovars by whole-cell matrix-assisted laser desorption ionization-time of fight mass spectrometry. Appl. Environ. Microbiol. 77(12), 4136-4146 (2011).
72. Chan P-H, Wong S-Y, Lin S-H, Chen Y-C. Lysozyme-encapsulated gold nanocluster-based affnity mass spectrometry for pathogenic bacteria. Rapid Commun. Mass Spec. 27(19), 2143-2148 (2013).
73. Xiaomeng W, Chao X, Tripp RA, Yao-Wen H, Yiping Z. Detection and differentiation of foodborne pathogenic bacteria in mung bean sprouts using field deployable label-free SERS devices. Analyst 138(10), 3005-3012 (2013).
74. Banerjee P, Franz B, Bhunia A. Mammalian cell-based sensor system. In: Whole Cell Sensing Systems I. Belkin S, Gu MB (Eds). Springer, Germany, 21-55 (2010).
75. Hruska Z, Yao H, Kincaid R et al. Fluorescence imaging spectroscopy (FIS) for comparing spectra from corn ears naturally and artifcially infected with afatoxin producing fungus. J. Food Sci. 78(8), T1313-T1320 (2013).