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Volumn 80, Issue 19, 2014, Pages 5884-5891

Dead or alive: Molecular assessment of microbial viability

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEIC ACIDS; PHYSIOLOGY;

EID: 84907033647     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01763-14     Document Type: Short Survey
Times cited : (229)

References (75)
  • 1
    • 79957898336 scopus 로고    scopus 로고
    • Determination of lactic microflora of kefir grains and kefir beverage by using culture-dependent and cultureindependent methods
    • Kesmen Z, Kacmaz N. 2011. Determination of lactic microflora of kefir grains and kefir beverage by using culture-dependent and cultureindependent methods. J. Food Sci. 76:M276-M283. http://dx.doi.org/10.1111/j.1750-3841.2011.02191.x.
    • (2011) J. Food Sci. , vol.76 , pp. M276-M283
    • Kesmen, Z.1    Kacmaz, N.2
  • 2
    • 84897538141 scopus 로고    scopus 로고
    • Integration of culture-based and molecular analysis of a complex spongeassociated bacterial community
    • Montalvo NF, Davis J, Vicente J, Pittiglio R, Ravel J, Hill RT. 2014. Integration of culture-based and molecular analysis of a complex spongeassociated bacterial community. PLoS One 9:e90517. http://dx.doi.org/10.1371/journal.pone.0090517.
    • (2014) PLoS One , vol.9
    • Montalvo, N.F.1    Davis, J.2    Vicente, J.3    Pittiglio, R.4    Ravel, J.5    Hill, R.T.6
  • 3
    • 84865161156 scopus 로고    scopus 로고
    • Cultivation of unculturable soil bacteria
    • Pham VHT, Kim J. 2012. Cultivation of unculturable soil bacteria. Trends Biotechnol. 30:475-484. http://dx.doi.org/10.1016/j.tibtech.2012.05.007.
    • (2012) Trends Biotechnol , vol.30 , pp. 475-484
    • Pham, V.H.T.1    Kim, J.2
  • 4
    • 0242523909 scopus 로고    scopus 로고
    • The uncultured microbial majority
    • Rappe´ MS, Giovannoni SJ. 2003. The uncultured microbial majority. Annu. Rev. Microbiol. 57:369-394. http://dx.doi.org/10.1146/annurev.micro.57.030502.090759.
    • (2003) Annu. Rev. Microbiol. , vol.57 , pp. 369-394
    • Rappe´, M.S.1    Giovannoni, S.J.2
  • 5
    • 84879296137 scopus 로고    scopus 로고
    • As-yet-uncultivated oral bacteria: breadth and association with oral and extra-oral diseases
    • Siqueira JF, Jr, Roˆc¸as IN. 2013. As-yet-uncultivated oral bacteria: breadth and association with oral and extra-oral diseases. J. Oral Microbiol. 2013:5. http://dx.doi.org/10.3402/jom.v5i0.21077.
    • (2013) J. Oral Microbiol. , vol.2013 , pp. 5
    • Siqueira, J.F.1    Roˆc¸as, I.N.2
  • 6
    • 84903649330 scopus 로고    scopus 로고
    • Cutaneous microbiome studies in the times of affordable sequencing
    • Tomic-Canic M, Perez-Perez GI, Blumenberg M. 2014. Cutaneous microbiome studies in the times of affordable sequencing. J. Dermatol. Sci. 75:82-87. http://dx.doi.org/10.1016/j.jdermsci.2014.05.001.
    • (2014) J. Dermatol. Sci. , vol.75 , pp. 82-87
    • Tomic-Canic, M.1    Perez-Perez, G.I.2    Blumenberg, M.3
  • 9
    • 58449118979 scopus 로고    scopus 로고
    • Novel approaches toward preferential detection of viable cells using nucleic acid amplification techniques
    • Nocker A, Camper AK. 2009. Novel approaches toward preferential detection of viable cells using nucleic acid amplification techniques. FEMS Microbiol. Lett. 291:137-142. http://dx.doi.org/10.1111/j.1574-6968.2008.01429.x.
    • (2009) FEMS Microbiol. Lett. , vol.291 , pp. 137-142
    • Nocker, A.1    Camper, A.K.2
  • 10
    • 33748746842 scopus 로고    scopus 로고
    • Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells
    • Nocker A, Cheung CY, Camper AK. 2006. Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells. J. Microbiol. Methods 67:310-320. http://dx.doi.org/10.1016/j.mimet.2006.04.015.
    • (2006) J. Microbiol. Methods , vol.67 , pp. 310-320
    • Nocker, A.1    Cheung, C.Y.2    Camper, A.K.3
  • 11
    • 80052633307 scopus 로고    scopus 로고
    • Life, death, and in-between: meanings and methods in microbiology
    • Davey HM. 2011. Life, death, and in-between: meanings and methods in microbiology. Appl. Environ. Microbiol. 77:5571-5576. http://dx.doi.org /10.1128/AEM.00744-11.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 5571-5576
    • Davey, H.M.1
  • 12
    • 75749127317 scopus 로고    scopus 로고
    • Molecular detection of viable bacterial pathogens in water by ratiometric pre-rRNA analysis
    • Cangelosi GA, Weigel KM, Lefthand-Begay C, Meschke JS. 2010. Molecular detection of viable bacterial pathogens in water by ratiometric pre-rRNA analysis. Appl. Environ. Microbiol. 76:960-962. http://dx.doi.org/10.1128/AEM.01810-09.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 960-962
    • Cangelosi, G.A.1    Weigel, K.M.2    Lefthand-Begay, C.3    Meschke, J.S.4
  • 13
    • 84898450273 scopus 로고    scopus 로고
    • Biosynthetic enhancement of the detection of bacteria by the polymerase chain reaction
    • 17 January
    • Do JS, Weigel KM, Meschke JS, Cangelosi GA. 17 January 2014. Biosynthetic enhancement of the detection of bacteria by the polymerase chain reaction. PLoS One. http://dx.doi.org/10.1371/journal.pone.0086433.
    • (2014) PLoS One
    • Do, J.S.1    Weigel, K.M.2    Meschke, J.S.3    Cangelosi, G.A.4
  • 14
    • 84872865681 scopus 로고    scopus 로고
    • Molecular viability testing of bacterial pathogens from a complex human sample matrix
    • Weigel KM, Jones KL, Do JS, Melton Witt J, Chung JH, Valcke C, Cangelosi GA. 2013. Molecular viability testing of bacterial pathogens from a complex human sample matrix. PLoS One 8:e54886. http://dx.doi.org/10.1371/journal.pone.0054886.
    • (2013) PLoS One , vol.8 , pp. e54886
    • Weigel, K.M.1    Jones, K.L.2    Do, J.S.3    Melton Witt, J.4    Chung, J.H.5    Valcke, C.6    Cangelosi, G.A.7
  • 17
    • 0034892241 scopus 로고    scopus 로고
    • Not quite dead enough: on bacterial life, culturability, senescence, and death
    • Nystro¨m T. 2001. Not quite dead enough: on bacterial life, culturability, senescence, and death. Arch. Microbiol. 176:159-164. http://dx.doi.org /10.1007/s002030100314.
    • (2001) Arch. Microbiol. , vol.176 , pp. 159-164
    • Nystro¨m, T.1
  • 18
    • 0022542108 scopus 로고
    • Viable but nonculturable stage of Campylobacter jejuni and its role in survival in the natural aquatic environment
    • Rollins DM, Colwell RR. 1986. Viable but nonculturable stage of Campylobacter jejuni and its role in survival in the natural aquatic environment. Appl. Environ. Microbiol. 52:531-538.
    • (1986) Appl. Environ. Microbiol. , vol.52 , pp. 531-538
    • Rollins, D.M.1    Colwell, R.R.2
  • 19
    • 0031878249 scopus 로고    scopus 로고
    • Viability and activity in readily culturable bacteria: a review and discussion of the practical issues
    • Kell DB, Kaprelyants AS, Weichart DH, Harwood CR, Barer MR. 1998. Viability and activity in readily culturable bacteria: a review and discussion of the practical issues. Antonie Van Leeuwenhoek 73:169-187. http://dx.doi.org/10.1023/A:1000664013047.
    • (1998) Antonie Van Leeuwenhoek , vol.73 , pp. 169-187
    • Kell, D.B.1    Kaprelyants, A.S.2    Weichart, D.H.3    Harwood, C.R.4    Barer, M.R.5
  • 20
    • 0032926818 scopus 로고    scopus 로고
    • Antiseptics and disinfectants: activity, action, and resistance
    • McDonnell G, Russell AD. 1999. Antiseptics and disinfectants: activity, action, and resistance. Clin. Microbiol. Rev. 12:147-179.
    • (1999) Clin. Microbiol. Rev. , vol.12 , pp. 147-179
    • McDonnell, G.1    Russell, A.D.2
  • 21
    • 0032780720 scopus 로고    scopus 로고
    • The use of multiple indices of physiological activity to access viability in chlorine disinfected Escherichia coli O157:H7
    • Lisle JT, Pyle BH, McFeters GA. 1999. The use of multiple indices of physiological activity to access viability in chlorine disinfected Escherichia coli O157:H7. Lett. Appl. Microbiol. 29:42-47. http://dx.doi.org/10.1046 /j.1365-2672.1999.00572.x.
    • (1999) Lett. Appl. Microbiol. , vol.29 , pp. 42-47
    • Lisle, J.T.1    Pyle, B.H.2    McFeters, G.A.3
  • 22
    • 0023735169 scopus 로고
    • The inhibition of bacterial growth by hypochlorous acid Possible role in the bactericidal activity of phagocytes
    • McKenna SM, Davies KJ. 1988. The inhibition of bacterial growth by hypochlorous acid. Possible role in the bactericidal activity of phagocytes. Biochem. J. 254:685-692.
    • (1988) Biochem. J. , vol.254 , pp. 685-692
    • McKenna, S.M.1    Davies, K.J.2
  • 24
    • 0028242257 scopus 로고
    • Physiological responses of bacteria in biofilms to disinfection
    • Yu FP, McFeters GA. 1994. Physiological responses of bacteria in biofilms to disinfection. Appl. Environ. Microbiol. 60:2462-2466.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 2462-2466
    • Yu, F.P.1    McFeters, G.A.2
  • 26
    • 65649089465 scopus 로고    scopus 로고
    • Solar disinfection (SODIS) and subsequent dark storage of Salmonella typhimurium and Shigella flexneri monitored by flow cytometry
    • Bosshard F, Berney M, Scheifele M, Weilenmann HU, Egli T. 2009. Solar disinfection (SODIS) and subsequent dark storage of Salmonella typhimurium and Shigella flexneri monitored by flow cytometry. Microbiology 155:1310-1317. http://dx.doi.org/10.1099/mic.0.024794-0.
    • (2009) Microbiology , vol.155 , pp. 1310-1317
    • Bosshard, F.1    Berney, M.2    Scheifele, M.3    Weilenmann, H.U.4    Egli, T.5
  • 27
    • 77954597043 scopus 로고    scopus 로고
    • The respiratory chain is the cell's Achilles' heel during UVA inactivation in Escherichia coli
    • Bosshard F, Bucheli M, Meur Y, Egli T. 2010. The respiratory chain is the cell's Achilles' heel during UVA inactivation in Escherichia coli. Microbiology 156:2006-2015. http://dx.doi.org/10.1099/mic.0.038471-0.
    • (2010) Microbiology , vol.156 , pp. 2006-2015
    • Bosshard, F.1    Bucheli, M.2    Meur, Y.3    Egli, T.4
  • 28
    • 0036840425 scopus 로고    scopus 로고
    • Evaluation of the heat inactivation of Escherichia coli and Lactobacillus plantarum by differential scanning calorimetry
    • Lee J, Kaletunc¸ G. 2002. Evaluation of the heat inactivation of Escherichia coli and Lactobacillus plantarum by differential scanning calorimetry. Appl. Environ. Microbiol. 68:5379-5386. http://dx.doi.org/10.1128/AEM.68.11.5379-5386.2002.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5379-5386
    • Lee, J.1    Kaletunc¸, G.2
  • 29
    • 0037385854 scopus 로고    scopus 로고
    • Conditional senescence in bacteria: death of the immortals
    • Nystro¨m T. 2003. Conditional senescence in bacteria: death of the immortals. Mol. Microbiol. 48:17-23. http://dx.doi.org/10.1046/j.1365-2958.2003.03385.x.
    • (2003) Mol. Microbiol. , vol.48 , pp. 17-23
    • Nystro¨m, T.1
  • 30
    • 61749094058 scopus 로고    scopus 로고
    • Nucleic acids as viability markers for bacteria detection using molecular tools
    • Cenciarini-Borde C, Courtois S, La Scola B. 2009. Nucleic acids as viability markers for bacteria detection using molecular tools. Future Microbiol. 4:45-64. http://dx.doi.org/10.2217/17460913.4.1.45.
    • (2009) Future Microbiol , vol.4 , pp. 45-64
    • Cenciarini-Borde, C.1    Courtois, S.2    La Scola, B.3
  • 31
    • 84890441684 scopus 로고    scopus 로고
    • Recent developments in the use of viability dyes and quantitative PCR in the food microbiology field
    • Elizaqui´vel P, Aznar R, Sa´nchez G. 2014. Recent developments in the use of viability dyes and quantitative PCR in the food microbiology field. J. Appl. Microbiol. 116:1-13. http://dx.doi.org/10.1111/jam.12365.
    • (2014) J. Appl. Microbiol. , vol.116 , pp. 1-13
    • Elizaqui´vel, P.1    Aznar, R.2    Sa´nchez, G.3
  • 32
    • 84867754639 scopus 로고    scopus 로고
    • Progress in understanding preferential detection of live cells using viability dyes in combination with DNA amplification
    • Fittipaldi M, Nocker A, Codony F. 2012. Progress in understanding preferential detection of live cells using viability dyes in combination with DNA amplification. J. Microbiol. Methods 91:276-289. http://dx.doi.org /10.1016/j.mimet.2012.08.007.
    • (2012) J. Microbiol. Methods , vol.91 , pp. 276-289
    • Fittipaldi, M.1    Nocker, A.2    Codony, F.3
  • 33
    • 81055140174 scopus 로고    scopus 로고
    • Molecular pathogen detection in biosolids with a focus on quantitative PCR using propidium monoazide for viable cell enumeration
    • van Frankenhuyzen JK, Trevors JT, Lee H, Flemming CA, Habash MB. 2011. Molecular pathogen detection in biosolids with a focus on quantitative PCR using propidium monoazide for viable cell enumeration. J. Microbiol. Methods 87:263-272. http://dx.doi.org/10.1016/j.mimet.2011.09.007.
    • (2011) J. Microbiol. Methods , vol.87 , pp. 263-272
    • van Frankenhuyzen, J.K.1    Trevors, J.T.2    Lee, H.3    Flemming, C.A.4    Habash, M.B.5
  • 34
    • 34547599355 scopus 로고    scopus 로고
    • Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR
    • Nocker A, Sossa KE, Camper AK. 2007. Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR. J. Microbiol. Methods 70:252-260. http://dx.doi.org/10.1016 /j.mimet.2007.04.014.
    • (2007) J. Microbiol. Methods , vol.70 , pp. 252-260
    • Nocker, A.1    Sossa, K.E.2    Camper, A.K.3
  • 35
    • 65549128538 scopus 로고    scopus 로고
    • PCR-based method using propidium monoazide to distinguish viable from nonviable Bacillus subtilis spores
    • Rawsthorne H, Dock CN, Jaykus LA. 2009. PCR-based method using propidium monoazide to distinguish viable from nonviable Bacillus subtilis spores. Appl. Environ. Microbiol. 75:2936-2939. http://dx.doi.org/10.1128/AEM.02524-08.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 2936-2939
    • Rawsthorne, H.1    Dock, C.N.2    Jaykus, L.A.3
  • 36
    • 80052966087 scopus 로고    scopus 로고
    • Use of propidium monoazide and quantitative PCR for differentiation of viable Escherichia coli from E. coli killed by mild or pasteurizing heat treatments
    • Yang X, Badoni M, Gill CO. 2011. Use of propidium monoazide and quantitative PCR for differentiation of viable Escherichia coli from E. coli killed by mild or pasteurizing heat treatments. Food Microbiol. 28:1478-1482. http://dx.doi.org/10.1016/j.fm.2011.08.013.
    • (2011) Food Microbiol , vol.28 , pp. 1478-1482
    • Yang, X.1    Badoni, M.2    Gill, C.O.3
  • 37
    • 84874432932 scopus 로고    scopus 로고
    • Improving efficiency of viability-PCR for selective detection of live cells
    • Nkuipou-Kenfack E, Engel H, Fakih S, Nocker A. 2013. Improving efficiency of viability-PCR for selective detection of live cells. J. Microbiol. Methods 93:20-24. http://dx.doi.org/10.1016/j.mimet.2013.01.018.
    • (2013) J. Microbiol. Methods , vol.93 , pp. 20-24
    • Nkuipou-Kenfack, E.1    Engel, H.2    Fakih, S.3    Nocker, A.4
  • 38
    • 84866292794 scopus 로고    scopus 로고
    • Long-amplicon propidium monoazide-PCR enumeration assay to detect viable Campylobac-ter and Salmonella
    • Banihashemi A, Van Dyke MI, Huck PM. 2012. Long-amplicon propidium monoazide-PCR enumeration assay to detect viable Campylobac-ter and Salmonella. J. Appl. Microbiol. 113:863-873. http://dx.doi.org/10.1111/j.1365-2672.2012.05382.x.
    • (2012) J. Appl. Microbiol. , vol.113 , pp. 863-873
    • Banihashemi, A.1    Van Dyke, M.I.2    Huck, P.M.3
  • 39
    • 80052362316 scopus 로고    scopus 로고
    • Effect of PCR amplicon length on suppressing signals from membrane-compromised cells by propidium monoazide treatment
    • Contreras PJ, Urrutia H, Sossa K, Nocker A. 2011. Effect of PCR amplicon length on suppressing signals from membrane-compromised cells by propidium monoazide treatment. J. Microbiol. Methods 87:89-95. http://dx.doi.org/10.1016/j.mimet.2011.07.016.
    • (2011) J. Microbiol. Methods , vol.87 , pp. 89-95
    • Contreras, P.J.1    Urrutia, H.2    Sossa, K.3    Nocker, A.4
  • 40
    • 80052260329 scopus 로고    scopus 로고
    • Polymerase chain reaction amplification length-dependent ethidium monoazide suppression power for heat-killed cells of Enterobacteriaceae
    • Soejima T, Schlitt-Dittrich F, Yoshida Si. 2011. Polymerase chain reaction amplification length-dependent ethidium monoazide suppression power for heat-killed cells of Enterobacteriaceae. Anal. Biochem. 418:37-43. http://dx.doi.org/10.1016/j.ab.2011.06.027.
    • (2011) Anal. Biochem. , vol.418 , pp. 37-43
    • Soejima, T.1    Schlitt-Dittrich, F.2    Si, Y.3
  • 41
    • 77956518398 scopus 로고    scopus 로고
    • Viability determination of Helicobacter pylori using propidium monoazide quantitative PCR
    • Agusti´ G, Codony F, Fittipaldi M, Adrados B, Morato´ J. 2010. Viability determination of Helicobacter pylori using propidium monoazide quantitative PCR. Helicobacter 15:473-476. http://dx.doi.org/10.1111/j.1523-5378.2010.00794.x.
    • (2010) Helicobacter , vol.15 , pp. 473-476
    • Agusti´, G.1    Codony, F.2    Fittipaldi, M.3    Adrados, B.4    Morato´, J.5
  • 42
    • 77955095180 scopus 로고    scopus 로고
    • Mycobacterium avium subsp. paratuberculosis viability determination using F57 quantitativePCRin combination with propidium monoazide treatment
    • Kralik P, Nocker A, Pavlik I. 2010. Mycobacterium avium subsp. paratuberculosis viability determination using F57 quantitativePCRin combination with propidium monoazide treatment. Int. J. Food Microbiol. 141(Suppl 1): S80-S86. http://dx.doi.org/10.1016/j.ijfoodmicro.2010.03.018.
    • (2010) Int. J. Food Microbiol. , vol.141 , pp. S80-S86
    • Kralik, P.1    Nocker, A.2    Pavlik, I.3
  • 43
    • 84872811981 scopus 로고    scopus 로고
    • The detection of viable vegetative cells of Bacillus sporothermodurans using propidium monoazide with semi-nested PCR
    • Cattani F, Ferreira CAS, Oliveira SD. 2013. The detection of viable vegetative cells of Bacillus sporothermodurans using propidium monoazide with semi-nested PCR. Food Microbiol. 34:196-201. http://dx.doi.org/10.1016/j.fm.2012.12.007.
    • (2013) Food Microbiol , vol.34 , pp. 196-201
    • Cattani, F.1    Ferreira, C.A.S.2    Oliveira, S.D.3
  • 44
    • 70350503115 scopus 로고    scopus 로고
    • Cryptosporidium propidium monoazide-PCR, a molecular biology-based technique for genotyping of viable Cryptosporidium oocysts
    • Brescia CC, Griffin SM, Ware MW, Varughese EA, Egorov AI, Villegas EN. 2009. Cryptosporidium propidium monoazide-PCR, a molecular biology-based technique for genotyping of viable Cryptosporidium oocysts. Appl. Environ. Microbiol. 75:6856-6863. http: //dx.doi.org/10.1128/AEM.00540-09.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 6856-6863
    • Brescia, C.C.1    Griffin, S.M.2    Ware, M.W.3    Varughese, E.A.4    Egorov, A.I.5    Villegas, E.N.6
  • 45
    • 79960449862 scopus 로고    scopus 로고
    • Discrimination of viable Acanthamoeba castellani trophozoites and cysts by propidium monoazide real-time polymerase chain reaction
    • Fittipaldi M, Pino Rodriguez NJ, Adrados B, Agusti´ G, Peñuela G, Morato´ J, Codony F. 2011. Discrimination of viable Acanthamoeba castellani trophozoites and cysts by propidium monoazide real-time polymerase chain reaction. J. Eukaryot. Microbiol. 58:359-364. http://dx.doi.org/10.1111/j.1550-7408.2011.00557.x.
    • (2011) J. Eukaryot. Microbiol. , vol.58 , pp. 359-364
    • Fittipaldi, M.1    Pino Rodriguez, N.J.2    Adrados, B.3    Agusti´, G.4    Peñuela, G.5    Morato´, J.6    Codony, F.7
  • 46
    • 84872334152 scopus 로고    scopus 로고
    • Viable quantitative PCR for assessing the response of Candida albicans to antifungal treatment
    • Agusti´ G, Fittipaldi M, Morato´ J, Codony F. 2013. Viable quantitative PCR for assessing the response of Candida albicans to antifungal treatment. Appl. Microbiol. Biotechnol. 97:341-349. http://dx.doi.org/10.1007/s00253-012-4524-z.
    • (2013) Appl. Microbiol. Biotechnol. , vol.97 , pp. 341-349
    • Agusti´, G.1    Fittipaldi, M.2    Morato´, J.3    Codony, F.4
  • 47
    • 78649518183 scopus 로고    scopus 로고
    • Determination of viable wine yeast using DNA binding dyes and quantitative PCR
    • Andorra` I, Esteve-Zarzoso B, Guillamo´n JM, Mas A. 2010. Determination of viable wine yeast using DNA binding dyes and quantitative PCR. Int. J. Food Microbiol. 144:257-262. http://dx.doi.org/10.1016/j.ijfoodmicro.2010.10.003.
    • (2010) Int. J. Food Microbiol. , vol.144 , pp. 257-262
    • I.1    Andorra2    Esteve-Zarzoso, B.4    Guillamo´n, J.M.5    Mas, A.6
  • 49
    • 84865320384 scopus 로고    scopus 로고
    • Using propidium monoazide to distinguish between viable and nonviable bacteria MS2 and murine norovirus
    • Kim SY, Ko G. 2012. Using propidium monoazide to distinguish between viable and nonviable bacteria, MS2 and murine norovirus. Lett. Appl. Microbiol. 55:182-188. http://dx.doi.org/10.1111/j.1472-765X.2012.03276.x.
    • (2012) Lett. Appl. Microbiol. , vol.55 , pp. 182-188
    • Kim, S.Y.1    Ko, G.2
  • 50
    • 77954287895 scopus 로고    scopus 로고
    • Use of propidium monoazide in reverse transcriptase PCR to distinguish between infectious and noninfectious enteric viruses in water samples
    • Parshionikar S, Laseke I, Fout GS. 2010. Use of propidium monoazide in reverse transcriptase PCR to distinguish between infectious and noninfectious enteric viruses in water samples. Appl. Environ. Microbiol. 76:4318-4326. http://dx.doi.org/10.1128/AEM.02800-09.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 4318-4326
    • Parshionikar, S.1    Laseke, I.2    Fout, G.S.3
  • 51
    • 84857652773 scopus 로고    scopus 로고
    • Discrimination of infectious hepatitis A viruses by propidium monoazide real-time RT-PCR
    • Sa´nchez G, Elizaqui´vel P, Aznar R. 2012. Discrimination of infectious hepatitis A viruses by propidium monoazide real-time RT-PCR. Food Environ. Virol. 4:21-25. http://dx.doi.org/10.1007/s12560-011-9074-5.
    • (2012) Food Environ. Virol. , vol.4 , pp. 21-25
    • Sa´nchez, G.1    Elizaqui´vel, P.2    Aznar, R.3
  • 52
    • 79960092323 scopus 로고    scopus 로고
    • Rapid detection of viable Salmonellae in produce by coupling propidium monoazide with loop-mediated isothermal amplification
    • Chen S, Wang F, Beaulieu JC, Stein RE, Ge B. 2011. Rapid detection of viable Salmonellae in produce by coupling propidium monoazide with loop-mediated isothermal amplification. Appl. Environ. Microbiol. 77: 4008-4016. http://dx.doi.org/10.1128/AEM.00354-11.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 4008-4016
    • Chen, S.1    Wang, F.2    Beaulieu, J.C.3    Stein, R.E.4    Ge, B.5
  • 53
    • 84868611669 scopus 로고    scopus 로고
    • Mechanisms for photoinactivation of Enterococcus faecalis in seawater
    • Sassoubre LM, Nelson KL, Boehm AB. 2012. Mechanisms for photoinactivation of Enterococcus faecalis in seawater. Appl. Environ. Microbiol. 78:7776-7785. http://dx.doi.org/10.1128/AEM.02375-12.
    • (2012) Appl. Environ. Microbiol. , vol.78 , pp. 7776-7785
    • Sassoubre, L.M.1    Nelson, K.L.2    Boehm, A.B.3
  • 54
    • 79953207371 scopus 로고    scopus 로고
    • Propidium monoazide combined with real-time quantitative PCR underestimates heat-killed Listeria innocua
    • Løvdal T, Hovda MB, Bjo¨rkblom B, Møller SG. 2011. Propidium monoazide combined with real-time quantitative PCR underestimates heat-killed Listeria innocua. J. Microbiol. Methods 85:164-169. http://dx.doi.org/10.1016/j.mimet.2011.01.027.
    • (2011) J. Microbiol. Methods , vol.85 , pp. 164-169
    • Løvdal, T.1    Hovda, M.B.2    Bjo¨rkblom, B.3    Møller, S.G.4
  • 55
    • 77955857659 scopus 로고    scopus 로고
    • Distinction between intact and antibiotic-inactivated bacteria by realtime PCR after treatment with propidium monoazide
    • Kobayashi H, Oethinger M, Tuohy MJ, Hall GS, Bauer TW. 2010. Distinction between intact and antibiotic-inactivated bacteria by realtime PCR after treatment with propidium monoazide. J. Orthop. Res. 28:1245-1251. http://dx.doi.org/10.1002/jor.21108.
    • (2010) J. Orthop. Res. , vol.28 , pp. 1245-1251
    • Kobayashi, H.1    Oethinger, M.2    Tuohy, M.J.3    Hall, G.S.4    Bauer, T.W.5
  • 57
    • 84867143685 scopus 로고    scopus 로고
    • Comparison of propidium monoazidequantitative PCR and reverse transcription quantitative PCR for viability detection of fresh Cryptosporidium oocysts following disinfection and after long-term storage in water samples
    • Liang Z, Keeley A. 2012. Comparison of propidium monoazidequantitative PCR and reverse transcription quantitative PCR for viability detection of fresh Cryptosporidium oocysts following disinfection and after long-term storage in water samples. Water Res. 46:5941-5953. http: //dx.doi.org/10.1016/j.watres.2012.08.014.
    • (2012) Water Res , vol.46 , pp. 5941-5953
    • Liang, Z.1    Keeley, A.2
  • 58
    • 0034016926 scopus 로고    scopus 로고
    • Monitoring precursor 16S rRNAs of Acinetobacter spp. in activated sludge wastewater treatment systems
    • Oerther DB, Pernthaler J, Schramm A, Amann R, Raskin L. 2000. Monitoring precursor 16S rRNAs of Acinetobacter spp. in activated sludge wastewater treatment systems. Appl. Environ. Microbiol. 66:2154-2165. http://dx.doi.org/10.1128/AEM.66.5.2154-2165.2000.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2154-2165
    • Oerther, D.B.1    Pernthaler, J.2    Schramm, A.3    Amann, R.4    Raskin, L.5
  • 59
    • 0030877499 scopus 로고    scopus 로고
    • Depletion of pre-16S rRNA in starved Escherichia coli cells
    • Cangelosi GA, Brabant WH. 1997. Depletion of pre-16S rRNA in starved Escherichia coli cells. J. Bacteriol. 179:4457-4463.
    • (1997) J. Bacteriol. , vol.179 , pp. 4457-4463
    • Cangelosi, G.A.1    Brabant, W.H.2
  • 60
    • 38949131938 scopus 로고    scopus 로고
    • Determination of specific growth rate by measurement of specific rate of ribosome synthesis in growing and nongrowing cultures of Acinetobacter calcoaceticus
    • Cutter MR, Stroot PG. 2008. Determination of specific growth rate by measurement of specific rate of ribosome synthesis in growing and nongrowing cultures of Acinetobacter calcoaceticus. Appl. Environ. Microbiol. 74:901-903. http://dx.doi.org/10.1128/AEM.01899-07.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 901-903
    • Cutter, M.R.1    Stroot, P.G.2
  • 61
    • 0033068936 scopus 로고    scopus 로고
    • Inhibition of Escherichia coli precursor-16S rRNA processing by mouse intestinal contents
    • Licht TR, Tolker-Nielsen T, Holmstrom K, Krogfelt KA, Molin S. 1999. Inhibition of Escherichia coli precursor-16S rRNA processing by mouse intestinal contents. Environ. Microbiol. 1:23-32. http://dx.doi.org/10.1046/j.1462-2920.1999.00001.x.
    • (1999) Environ. Microbiol. , vol.1 , pp. 23-32
    • Licht, T.R.1    Tolker-Nielsen, T.2    Holmstrom, K.3    Krogfelt, K.A.4    Molin, S.5
  • 62
    • 67649603925 scopus 로고    scopus 로고
    • Reverse transcription of 16S rRNA to monitor ribosome-synthesizing bacterial populations in the environment
    • Lu T, Stroot PG, Oerther DB. 2009. Reverse transcription of 16S rRNA to monitor ribosome-synthesizing bacterial populations in the environment. Appl. Environ. Microbiol. 75:4589-4598. http://dx.doi.org/10.1128/AEM.02970-08.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 4589-4598
    • Lu, T.1    Stroot, P.G.2    Oerther, D.B.3
  • 63
    • 0042165979 scopus 로고    scopus 로고
    • Elevated precursor 16S rRNA levels suggest the presence of growth inhibitors in wastewater
    • Stroot PG, Oerther DB. 2003. Elevated precursor 16S rRNA levels suggest the presence of growth inhibitors in wastewater. Water Sci. Technol. 47: 241-250.
    • (2003) Water Sci. Technol. , vol.47 , pp. 241-250
    • Stroot, P.G.1    Oerther, D.B.2
  • 64
    • 0036024799 scopus 로고    scopus 로고
    • Quantifying the impact of wastewater micronutrient composition on in situ growth activity of Acinetobacter spp
    • Oerther DB, van Loosdrecht MC, Raskin L. 2002. Quantifying the impact of wastewater micronutrient composition on in situ growth activity of Acinetobacter spp. Water Sci. Technol. 46:443-437.
    • (2002) Water Sci. Technol. , vol.46 , pp. 437-443
    • Oerther, D.B.1    van Loosdrecht, M.C.2    Raskin, L.3
  • 65
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese CR. 1987. Bacterial evolution. Microbiol. Rev. 51:221-271.
    • (1987) Microbiol. Rev. , vol.51 , pp. 221-271
    • Woese, C.R.1
  • 68
    • 79251586529 scopus 로고    scopus 로고
    • Discrimination between live and dead cells in bacterial communities from environmental water samples analyzed by 454 pyrosequencing
    • Nocker A, Richter-Heitmann T, Montjin R, Schuren F, Kort R. 2010. Discrimination between live and dead cells in bacterial communities from environmental water samples analyzed by 454 pyrosequencing. Int. Microbiol. 13:59-65.
    • (2010) Int. Microbiol. , vol.13 , pp. 59-65
    • Nocker, A.1    Richter-Heitmann, T.2    Montjin, R.3    Schuren, F.4    Kort, R.5
  • 69
    • 34548261775 scopus 로고    scopus 로고
    • Use of propidium monoazide for live/dead distinction in microbial ecology
    • Nocker A, Sossa-Fernandez P, Burr MD, Camper AK. 2007. Use of propidium monoazide for live/dead distinction in microbial ecology. Appl. Environ. Microbiol. 73:5111-5117. http://dx.doi.org/10.1128/AEM.02987-06.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5111-5117
    • Nocker, A.1    Sossa-Fernandez, P.2    Burr, M.D.3    Camper, A.K.4
  • 70
    • 33750306188 scopus 로고    scopus 로고
    • Use of ethidium bromide monoazide for quantification of viable and dead mixed bacterial flora from fish fillets by polymerase chain reaction
    • Lee JL, Levin RE. 2006. Use of ethidium bromide monoazide for quantification of viable and dead mixed bacterial flora from fish fillets by polymerase chain reaction. J. Microbiol. Methods 67:456-462. http://dx.doi.org/10.1016/j.mimet.2006.04.019.
    • (2006) J. Microbiol. Methods , vol.67 , pp. 456-462
    • Lee, J.L.1    Levin, R.E.2
  • 71
    • 34547579868 scopus 로고    scopus 로고
    • Genotypic microbial community profiling: a critical technical review
    • Nocker A, Burr M, Camper A. 2007. Genotypic microbial community profiling: a critical technical review. Microb. Ecol. 54:276-289. http://dx.doi.org/10.1007/s00248-006-9199-5.
    • (2007) Microb. Ecol. , vol.54 , pp. 276-289
    • Nocker, A.1    Burr, M.2    Camper, A.3
  • 72
    • 0035210373 scopus 로고    scopus 로고
    • 16S-23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium-oxidizing bacteria: implications for phylogeny and in situ detection
    • Schmid M, Schmitz-Esser S, Jetten M, Wagner M. 2001. 16S-23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium-oxidizing bacteria: implications for phylogeny and in situ detection. Environ. Microbiol. 3:450-459. http://dx.doi.org/10.1046/j.1462-2920.2001.00211.x.
    • (2001) Environ. Microbiol. , vol.3 , pp. 450-459
    • Schmid, M.1    Schmitz-Esser, S.2    Jetten, M.3    Wagner, M.4
  • 74
    • 84876122754 scopus 로고    scopus 로고
    • The future is now: single-cell genomics of bacteria and archaea
    • Blainey PC. 2013. The future is now: single-cell genomics of bacteria and archaea. FEMS Microbiol. Rev. 37:407-427. http://dx.doi.org/10.1111 /1574-6976.12015.
    • (2013) FEMS Microbiol. Rev. , vol.37 , pp. 407-427
    • Blainey, P.C.1
  • 75
    • 84864394611 scopus 로고    scopus 로고
    • Genomic sequencing of uncultured microorganisms from single cells
    • Lasken RS. 2012. Genomic sequencing of uncultured microorganisms from single cells. Nat. Rev. Microbiol. 10:631-640. http://dx.doi.org/10.1038/nrmicro2857.
    • (2012) Nat. Rev. Microbiol. , vol.10 , pp. 631-640
    • Lasken, R.S.1


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