-
1
-
-
85013746467
-
-
second ed. Academic Press San Diego, CA
-
J. Cavanagh, W.J. Fairbrother, A.G. Palmer, M. Rance, and N.J. Skelton Protein NMR Spectroscopy: Principles and Practice second ed. 2007 Academic Press San Diego, CA
-
(2007)
Protein NMR Spectroscopy: Principles and Practice
-
-
Cavanagh, J.1
Fairbrother, W.J.2
Palmer, A.G.3
Rance, M.4
Skelton, N.J.5
-
2
-
-
33846851242
-
Study of moderately rapid chemical exchange reactions by means of nuclear magnetic double resonance
-
S. Forsén, and R.A. Hoffman Study of moderately rapid chemical exchange reactions by means of nuclear magnetic double resonance J. Chem. Phys. 39 1963 2892
-
(1963)
J. Chem. Phys.
, vol.39
, pp. 2892
-
-
Forsén, S.1
Hoffman, R.A.2
-
3
-
-
36849121702
-
Dissociation, chemical exchange, and the proton magnetic resonance in some aqueous electrolytes
-
H.S. Gutowsky, and A. Saika Dissociation, chemical exchange, and the proton magnetic resonance in some aqueous electrolytes J. Chem. Phys. 21 1953 1688 1694
-
(1953)
J. Chem. Phys.
, vol.21
, pp. 1688-1694
-
-
Gutowsky, H.S.1
Saika, A.2
-
4
-
-
0025288350
-
Elimination of cross-relaxation effects from two-dimensional chemical-exchange spectra of macromolecules
-
DOI 10.1021/ja00163a014
-
J. Fejzo, W.M. Westler, S. Macura, and J.L. Markley Elimination of cross-relaxation effects from two-dimensional chemical-exchange spectra of macromolecules J. Am. Chem. Soc. 112 1990 2574 2577 (Pubitemid 20186165)
-
(1990)
Journal of the American Chemical Society
, vol.112
, Issue.7
, pp. 2574-2577
-
-
Fejzo, J.1
Westler, W.M.2
Macura, S.3
Markley, J.L.4
-
6
-
-
0024449503
-
15N inverse detected heteronuclear NMR spectroscopy: Application to staphylococcal nuclease
-
15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease Biochemistry 28 1989 8972 8979 (Pubitemid 19283459)
-
(1989)
Biochemistry
, vol.28
, Issue.23
, pp. 8972-8979
-
-
Kay, L.E.1
Torchia, D.A.2
Bax, A.3
-
7
-
-
0034919305
-
Nuclear magnetic resonance methods for quantifying microsecond-to- millisecond motions in biological macromolecules
-
DOI 10.1016/S0076-6879(01)39315-1
-
A.G. Palmer, C.D. Kroenke, and J.P. Loria Nuclear magnetic resonance methods for quantifying microsecond-to-millisecond motions in biological macromolecules Methods Enzymol. 339 2001 204 238 (Pubitemid 32666562)
-
(2001)
Methods in Enzymology
, vol.339
, pp. 204-238
-
-
Palmer III, A.G.1
Kroenke, C.D.2
Loria, J.P.3
-
8
-
-
33748511877
-
Solution NMR and computer simulation studies of active site loop motion in triosephosphate isomerase
-
DOI 10.1021/bi060764c
-
F. Massi, C. Wang, and A.G. Palmer Solution NMR and computer simulation studies of active site loop motion in triosephosphate isomerase Biochemistry 45 2006 10787 10794 (Pubitemid 44360148)
-
(2006)
Biochemistry
, vol.45
, Issue.36
, pp. 10787-10794
-
-
Massi, F.1
Wang, C.2
Palmer III, A.G.3
-
10
-
-
4344592803
-
Dynamics of ATP-binding cassette contribute to allosteric control, nucleotide binding and energy transduction in ABC transporters
-
DOI 10.1016/j.jmb.2004.07.001, PII S0022283604008009
-
C. Wang, N. Karpowich, J.F. Hunt, M. Rance, and A.G. Palmer Dynamics of ATP-binding cassette contribute to allosteric control, nucleotide binding and energy tranduction in ABC transporters J. Mol. Biol. 342 2004 525 537 (Pubitemid 39149756)
-
(2004)
Journal of Molecular Biology
, vol.342
, Issue.2
, pp. 525-537
-
-
Wang, C.1
Karpowich, N.2
Hunt, J.F.3
Rance, M.4
Palmer, A.G.5
-
12
-
-
0033577288
-
A relaxation-compensated Carr-Purcell-Meiboom-Gill sequence for characterizing chemical exchange by NMR spectroscopy [13]
-
DOI 10.1021/ja983961a
-
J.P. Loria, M. Rance, and A.G. Palmer A relaxation-compensated Carr-Purcell-Meiboom-Gill sequence for characterizing chemical exchange by NMR spectroscopy J. Am. Chem. Soc. 121 1999 2331 2332 (Pubitemid 29152458)
-
(1999)
Journal of the American Chemical Society
, vol.121
, Issue.10
, pp. 2331-2332
-
-
Loria, J.P.1
Rance, M.2
Palmer III, A.G.3
-
15
-
-
78649509231
-
1H Carr-Purcell-Meiboom-Gill relaxation dispersion NMR measurements: Application to activation of the signaling protein NtrCr
-
1H Carr-Purcell-Meiboom-Gill relaxation dispersion NMR measurements: application to activation of the signaling protein NtrCr J. Am. Chem. Soc. 132 2010 17004 17014
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 17004-17014
-
-
Otten, R.1
Villali, J.2
Kern, D.3
Mulder, F.A.A.4
-
19
-
-
84884269696
-
Solid-state NMR approaches to internal dynamics of proteins: From picoseconds to microseconds and seconds
-
A. Krushelnitsky, D. Reichert, and K. Saalwachter Solid-state NMR approaches to internal dynamics of proteins: from picoseconds to microseconds and seconds Acc. Chem. Res. 46 2013 2028 2036
-
(2013)
Acc. Chem. Res.
, vol.46
, pp. 2028-2036
-
-
Krushelnitsky, A.1
Reichert, D.2
Saalwachter, K.3
-
21
-
-
84880137185
-
Fast and accurate fitting of relaxation dispersion data using the flexible software package GLOVE
-
K. Sugase, T. Konuma, J.C. Lansing, and P.E. Wright Fast and accurate fitting of relaxation dispersion data using the flexible software package GLOVE J. Biomol. NMR 56 2013 275 283
-
(2013)
J. Biomol. NMR
, vol.56
, pp. 275-283
-
-
Sugase, K.1
Konuma, T.2
Lansing, J.C.3
Wright, P.E.4
-
22
-
-
80054938897
-
Automated NMR relaxation dispersion data analysis using NESSY
-
M. Bieri, and P.R. Gooley Automated NMR relaxation dispersion data analysis using NESSY BMC Bioinformatics 12 2011 421
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 421
-
-
Bieri, M.1
Gooley, P.R.2
-
23
-
-
4243179124
-
2 free-precession relaxation in the presence of n-site chemical exchange
-
2 free-precession relaxation in the presence of n-site chemical exchange J. Magn. Reson. 170 2004 104 112
-
(2004)
J. Magn. Reson.
, vol.170
, pp. 104-112
-
-
Trott, O.1
Palmer, A.G.2
-
24
-
-
0343359244
-
Investigation of exchange processes by two-dimensional NMR spectroscopy
-
J. Jeener, B.H. Meier, P. Bachmann, and R.R. Ernst Investigation of exchange processes by two-dimensional NMR spectroscopy J. Chem. Phys. 71 1979 4546 4553
-
(1979)
J. Chem. Phys.
, vol.71
, pp. 4546-4553
-
-
Jeener, J.1
Meier, B.H.2
Bachmann, P.3
Ernst, R.R.4
-
25
-
-
33845182844
-
2D chemical exchange NMR spectroscopy by proton-detected heteronuclear correlation
-
G.T. Montelione, and G. Wagner 2D chemical exchange NMR spectroscopy by proton-detected heteronuclear correlation J. Am. Chem. Soc. 111 1989 3096 3098
-
(1989)
J. Am. Chem. Soc.
, vol.111
, pp. 3096-3098
-
-
Montelione, G.T.1
Wagner, G.2
-
26
-
-
0001882103
-
Studies of slow conformational equilibria in macromolecules by exchange of heteronuclear longitudinal 2-spin-order in a 2D difference correlation experiment
-
G. Wider, D. Neri, and K. Wüthrich Studies of slow conformational equilibria in macromolecules by exchange of heteronuclear longitudinal 2-spin-order in a 2D difference correlation experiment J. Biomol. NMR 1 1991 93 98
-
(1991)
J. Biomol. NMR
, vol.1
, pp. 93-98
-
-
Wider, G.1
Neri, D.2
Wüthrich, K.3
-
28
-
-
84885339164
-
Mechanism of E-cadherin dimerization probed by NMR relaxation dispersion
-
Y. Li, N.L. Altorelli, F. Bahna, B. Honig, L. Shapiro, and A.G. Palmer Mechanism of E-cadherin dimerization probed by NMR relaxation dispersion Proc. Natl. Acad. Sci. U. S. A. 110 2013 16462 16467
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 16462-16467
-
-
Li, Y.1
Altorelli, N.L.2
Bahna, F.3
Honig, B.4
Shapiro, L.5
Palmer, A.G.6
-
29
-
-
48149113644
-
Dynamic properties of a type II cadherin adhesive domain: Implications for the mechanism of strand-swapping of classical cadherins
-
V.Z. Miloushev, F. Bahna, C. Ciatto, G. Ahlsen, B. Honig, L. Shapiro, and A.G. Palmer Dynamic properties of a type II cadherin adhesive domain: implications for the mechanism of strand-swapping of classical cadherins Structure 16 2008 1195 1205
-
(2008)
Structure
, vol.16
, pp. 1195-1205
-
-
Miloushev, V.Z.1
Bahna, F.2
Ciatto, C.3
Ahlsen, G.4
Honig, B.5
Shapiro, L.6
Palmer, A.G.7
-
31
-
-
71049172775
-
TROSY-selected ZZ-exchange experiment for characterizing slow chemical exchange in large proteins
-
Y. Li, and A.G. Palmer TROSY-selected ZZ-exchange experiment for characterizing slow chemical exchange in large proteins J. Biomol. NMR 45 2009 357 360
-
(2009)
J. Biomol. NMR
, vol.45
, pp. 357-360
-
-
Li, Y.1
Palmer, A.G.2
-
32
-
-
35848970780
-
TROSY-based z-exchange spectroscopy: Application to the determination of the activation energy for intermolecular protein translocation between specific sites on different DNA molecules
-
DOI 10.1021/ja074604f
-
D. Sahu, G.M. Clore, and J. Iwahara TROSY-based z-exchange spectroscopy: application to the determination of the activation energy for intermolecular protein translocation between specific sites on different DNA molecules J. Am. Chem. Soc. 129 2007 13232 13237 (Pubitemid 350058364)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.43
, pp. 13232-13237
-
-
Sahu, D.1
Clore, G.M.2
Iwahara, J.3
-
33
-
-
16244365477
-
Solution NMR spin relaxation methods for characterizing chemical exchange in high-molecular-weight systems
-
DOI 10.1016/S0076-6879(05)94018-4, Nuclear Magnetic Resonance of Biological Macromolecules
-
A.G. Palmer, M.J. Grey, and C. Wang Solution NMR spin relaxation methods for characterizing chemical exchange in high-molecular-weight systems Methods Enzymol. 394 2005 430 465 (Pubitemid 40460927)
-
(2005)
Methods in Enzymology
, vol.394
, pp. 430-465
-
-
Palmer III, A.G.1
Grey, M.J.2
Wang, C.3
-
34
-
-
84855455990
-
Antiparallel EmrE exports drugs by exchanging between asymmetric structures
-
E.A. Morrison, G.T. DeKoster, S. Dutta, R. Vafabakhsh, M.W. Clarkson, A. Bahl, D. Kern, T. Ha, and K.A. Henzler-Wildman Antiparallel EmrE exports drugs by exchanging between asymmetric structures Nature 481 2012 45 50
-
(2012)
Nature
, vol.481
, pp. 45-50
-
-
Morrison, E.A.1
Dekoster, G.T.2
Dutta, S.3
Vafabakhsh, R.4
Clarkson, M.W.5
Bahl, A.6
Kern, D.7
Ha, T.8
Henzler-Wildman, K.A.9
-
35
-
-
0037197669
-
13C-labeled long-chain fatty acids
-
DOI 10.1021/bi011914g
-
13C-labeled long-chain fatty acids Biochemistry 41 2002 5453 5461 (Pubitemid 34429380)
-
(2002)
Biochemistry
, vol.41
, Issue.17
, pp. 5453-5461
-
-
Wang, H.1
He, Y.2
Kroenke, C.D.3
Kodukula, S.4
Storch, J.5
Palmer, A.G.6
Stark, R.E.7
-
36
-
-
35948981100
-
Characterization of chemical exchange using residual dipolar coupling
-
DOI 10.1021/ja0761636
-
T.I. Igumenova, U. Brath, M. Akke, and A.G. Palmer Characterization of chemical exchange using residual dipolar coupling J. Am. Chem. Soc. 129 2007 13396 13397 (Pubitemid 350071761)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.44
, pp. 13396-13397
-
-
Igumenova, T.I.1
Brath, U.2
Akke, M.3
Palmer III, A.G.4
-
37
-
-
36749058463
-
Measurement of bond vector orientations in invisible excited states of proteins
-
DOI 10.1073/pnas.0708296104
-
P. Vallurupalli, D.F. Hansen, E. Stollar, E. Meirovitch, and L.E. Kay Measurement of bond vector orientations in invisible excited states of proteins Proc. Natl. Acad. Sci. U. S. A. 104 2007 18473 18477 (Pubitemid 350210721)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.47
, pp. 18473-18477
-
-
Vallurupalli, P.1
Hansen, D.F.2
Stollar, E.3
Meirovitch, E.4
Kay, L.E.5
-
38
-
-
33846245132
-
Singlet-state exchange NMR spectroscopy for the study of very slow dynamic processes
-
DOI 10.1021/ja0647396
-
R. Sarkar, P.R. Vasos, and G. Bodenhausen Singlet-state exchange NMR spectroscopy for the study of very slow dynamic processes J. Am. Chem. Soc. 129 2007 328 334 (Pubitemid 46106632)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.2
, pp. 328-334
-
-
Sarkar, R.1
Vasos, P.R.2
Bodenhausen, G.3
-
40
-
-
84861595189
-
Heteronuclear adiabatic relaxation dispersion (HARD) for quantitative analysis of conformational dynamics in proteins
-
N.J. Traaseth, F.-A. Chao, L.R. Masterson, S. Mangia, M. Garwood, S. Michaeli, B. Seelig, and G. Veglia Heteronuclear adiabatic relaxation dispersion (HARD) for quantitative analysis of conformational dynamics in proteins J. Magn. Reson. 219 2012 75 82
-
(2012)
J. Magn. Reson.
, vol.219
, pp. 75-82
-
-
Traaseth, N.J.1
Chao, F.-A.2
Masterson, L.R.3
Mangia, S.4
Garwood, M.5
Michaeli, S.6
Seelig, B.7
Veglia, G.8
-
43
-
-
0003186638
-
Analysis of Carr-Purcell spin-echo NMR experiments on multiple-spin systems. II. The effect of chemical exchange
-
A. Allerhand, and E. Thiele Analysis of Carr-Purcell spin-echo NMR experiments on multiple-spin systems. II. The effect of chemical exchange J. Chem. Phys. 45 1966 902 916
-
(1966)
J. Chem. Phys.
, vol.45
, pp. 902-916
-
-
Allerhand, A.1
Thiele, E.2
-
44
-
-
0001766423
-
2 relaxation - The multisite case
-
2 relaxation - the multisite case J. Magn. Reson. 30 1978 111 128
-
(1978)
J. Magn. Reson.
, vol.30
, pp. 111-128
-
-
Jen, J.1
-
45
-
-
0032871220
-
Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution
-
DOI 10.1023/A:1008324025406
-
R. Ishima, and D.A. Torchia Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution J. Biomol. NMR 14 1999 369 372 (Pubitemid 29469059)
-
(1999)
Journal of Biomolecular NMR
, vol.14
, Issue.4
, pp. 369-372
-
-
Ishima, R.1
Torchia, D.A.2
-
46
-
-
0036018262
-
1ρ relaxation outside of the fast-exchange limit
-
1ρ relaxation outside of the fast-exchange limit J. Magn. Reson. 154 2002 157 160
-
(2002)
J. Magn. Reson.
, vol.154
, pp. 157-160
-
-
Trott, O.1
Palmer, A.G.2
-
48
-
-
28044438902
-
1ρ relaxation for two-site chemical exchange: General approximations and some exact solutions
-
DOI 10.1016/j.jmr.2005.07.023, PII S1090780705002491
-
1ρ relaxation for two-site chemical exchange: general approximations and some exact solutions J. Magn. Reson. 177 2005 221 227 (Pubitemid 41690885)
-
(2005)
Journal of Magnetic Resonance
, vol.177
, Issue.2
, pp. 221-227
-
-
Miloushev, V.Z.1
Palmer III, A.G.2
-
49
-
-
84879552012
-
1ρ expression for a spin in chemical exchange between two sites with unequal transverse relaxation rates
-
1ρ expression for a spin in chemical exchange between two sites with unequal transverse relaxation rates J. Biomol. NMR 55 2013 211 218
-
(2013)
J. Biomol. NMR
, vol.55
, pp. 211-218
-
-
Baldwin, A.J.1
Kay, L.E.2
-
51
-
-
83055176454
-
Atomic-resolution dynamics on the surface of amyloid-β protofibrils probed by solution NMR
-
N.L. Fawzi, J. Ying, R. Ghirlando, D.A. Torchia, and G.M. Clore Atomic-resolution dynamics on the surface of amyloid-β protofibrils probed by solution NMR Nature 480 2011 268 272
-
(2011)
Nature
, vol.480
, pp. 268-272
-
-
Fawzi, N.L.1
Ying, J.2
Ghirlando, R.3
Torchia, D.A.4
Clore, G.M.5
-
52
-
-
0037120879
-
Reconstructing NMR spectra of "invisible" excited protein states using HSQC and HMQC experiments
-
DOI 10.1021/ja0207089
-
N.R. Skrynnikov, F.W. Dahlquist, and L.E. Kay Reconstructing NMR spectra of "invisible" excited protein states using HSQC and HMQC experiments J. Am. Chem. Soc. 124 2002 12352 12360 (Pubitemid 35154900)
-
(2002)
Journal of the American Chemical Society
, vol.124
, Issue.41
, pp. 12352-12360
-
-
Skrynnikov, N.R.1
Dahlquist, F.W.2
Kay, L.E.3
-
55
-
-
0000486802
-
Suppression of the effects of cross-correlation between dipolar and anisotropic chemical shift relaxation mechanisms in the measurement of spin-spin relaxation rates
-
A.G. Palmer, N.J. Skelton, W.J. Chazin, P.E. Wright, and M. Rance Suppression of the effects of cross-correlation between dipolar and anisotropic chemical shift relaxation mechanisms in the measurement of spin-spin relaxation rates Mol. Phys. 75 1992 699 711
-
(1992)
Mol. Phys.
, vol.75
, pp. 699-711
-
-
Palmer, A.G.1
Skelton, N.J.2
Chazin, W.J.3
Wright, P.E.4
Rance, M.5
-
57
-
-
0034809982
-
Probing slow time scale dynamics at methyl-containing side chains in proteins by relaxation dispersion NMR measurements: Application to methionine residues in a cavity mutant of T4 lysozyme
-
DOI 10.1021/ja004179p
-
N.R. Skrynnikov, F.A.A. Mulder, B. Hon, F.W. Dahlquist, and L.E. Kay Probing slow time scale dynamics at methyl-containing side chains in proteins by relaxation dispersion NMR measurements: application to methionine residues in a cavity mutant of T4 lysozyme J. Am. Chem. Soc. 123 2001 4556 4566 (Pubitemid 32923384)
-
(2001)
Journal of the American Chemical Society
, vol.123
, Issue.19
, pp. 4556-4566
-
-
Skrynnikov, N.R.1
Mulder, F.A.A.2
Hon, B.3
Dahlquist, F.W.4
Kay, L.E.5
-
58
-
-
44949262025
-
15N relaxation dispersion experiment for the measurement of millisecond time-scale dynamics in proteins
-
15N relaxation dispersion experiment for the measurement of millisecond time-scale dynamics in proteins J. Phys. Chem. B 112 2008 5898 5904
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 5898-5904
-
-
Hansen, D.F.1
Vallurupalli, P.2
Kay, L.E.3
-
60
-
-
0037063506
-
An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates
-
D.M. Korzhnev, N.R. Skrynnikov, O. Millet, D.A. Torchia, and L.E. Kay An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates J. Am. Chem. Soc. 124 2002 10743 10753
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 10743-10753
-
-
Korzhnev, D.M.1
Skrynnikov, N.R.2
Millet, O.3
Torchia, D.A.4
Kay, L.E.5
-
62
-
-
84864210811
-
Exceeding the limit of dynamics studies on biomolecules using high spin-lock field strengths with a cryogenically cooled probehead
-
D. Ban, A.D. Gossert, K. Giller, S. Becker, C. Griesinger, and D. Lee Exceeding the limit of dynamics studies on biomolecules using high spin-lock field strengths with a cryogenically cooled probehead J. Magn. Reson. 221 2012 1 4
-
(2012)
J. Magn. Reson.
, vol.221
, pp. 1-4
-
-
Ban, D.1
Gossert, A.D.2
Giller, K.3
Becker, S.4
Griesinger, C.5
Lee, D.6
-
63
-
-
0033788347
-
Differential multiple-quantum relaxation arising from cross-correlated time-modulation of isotropic chemical shifts
-
K. Kloiber, and R. Konrat Differential multiple-quantum relaxation arising from cross-correlated time-modulation of isotropic chemical shifts J. Biomol. NMR 18 2000 33 42
-
(2000)
J. Biomol. NMR
, vol.18
, pp. 33-42
-
-
Kloiber, K.1
Konrat, R.2
-
64
-
-
1042288192
-
Evidence for Slow Motion in Proteins by Multiple Refocusing of Heteronuclear Nitrogen/Proton Multiple Quantum Coherences in NMR
-
DOI 10.1021/ja0386243
-
J. Dittmer, and G. Bodenhausen Evidence for slow motion in proteins by multiple refocusing of heteronuclear nitrogen/proton multiple quantum coherences in NMR J. Am. Chem. Soc. 126 2004 1314 1315 (Pubitemid 38200784)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.5
, pp. 1314-1315
-
-
Dittmer, J.1
Bodenhausen, G.2
-
65
-
-
2942592052
-
Multiple-quantum relaxation dispersion NMR spectroscopy probing millisecond time-scale dynamics in proteins: Theory and application
-
DOI 10.1021/ja049968b
-
D.M. Korzhnev, K. Kloiber, and L.E. Kay Multiple-quantum relaxation dispersion NMR spectroscopy probing millisecond time-scale dynamics in proteins: theory and application J. Am. Chem. Soc. 126 2004 7320 7329 (Pubitemid 38747781)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.23
, pp. 7320-7329
-
-
Korzhnev, D.M.1
Kloiber, K.2
Kay, L.E.3
-
66
-
-
1642494623
-
15N Multiple-Quantum Relaxation Using Field-Dependent Measurements. Time Scale and Structural Characterization of Exchange in a Calmodulin C-Terminal Domain Mutant
-
DOI 10.1021/ja037529r
-
15N multiple-quantum relaxation using field-dependent measurements. Time scale and structural characterization of exchange in a calmodulin C-terminal domain mutant J. Am. Chem. Soc. 126 2004 928 935 (Pubitemid 38114377)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.3
, pp. 928-935
-
-
Lundstrom, P.1
Akke, M.2
-
67
-
-
1242336825
-
Double- and Zero-Quantum NMR Relaxation Dispersion Experiments Sampling Millisecond Time Scale Dynamics in Proteins
-
V.Y. Orekhov, D.M. Korzhnev, and L.E. Kay Double- and zero-quantum NMR relaxation dispersion experiments sampling millisecond time scale dynamics in proteins J. Am. Chem. Soc. 126 2004 1886 1891 (Pubitemid 38222773)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.6
, pp. 1886-1891
-
-
Orekhov, V.Yu.1
Korzhnev, D.M.2
Kay, L.E.3
-
68
-
-
33645921636
-
Detection of correlated dynamics on multiple timescales by measurement of the differential relaxation of zero- and double-quantum coherences involving sidechain methyl groups in proteins
-
A. Del Rio, A. Anand, and R. Ghose Detection of correlated dynamics on multiple timescales by measurement of the differential relaxation of zero- and double-quantum coherences involving sidechain methyl groups in proteins J. Magn. Reson. 180 2006 1 17
-
(2006)
J. Magn. Reson.
, vol.180
, pp. 1-17
-
-
Del Rio, A.1
Anand, A.2
Ghose, R.3
-
69
-
-
35048898436
-
15N transverse relaxation: An NMR spectroscopy application to the study of a folding intermediate with pervasive chemical exchange
-
DOI 10.1021/ja072717t
-
15N transverse relaxation: an NMR spectroscopy application to the study of a folding intermediate with pervasive chemical exchange J. Am. Chem. Soc. 129 2007 11468 11479 (Pubitemid 47555566)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.37
, pp. 11468-11479
-
-
Hansen, D.F.1
Yang, D.2
Feng, H.3
Zhou, Z.4
Wiesner, S.5
Bai, Y.6
Kay, L.E.7
-
71
-
-
84856707634
-
Time scales of slow motions in ubiquitin explored by heteronuclear double resonance
-
N. Salvi, S. Ulzega, F. Ferrage, and G. Bodenhausen Time scales of slow motions in ubiquitin explored by heteronuclear double resonance J. Am. Chem. Soc. 134 2012 2481 2484
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 2481-2484
-
-
Salvi, N.1
Ulzega, S.2
Ferrage, F.3
Bodenhausen, G.4
-
72
-
-
1242272916
-
Probing slow backbone dynamics in proteins using TROSY-based experiments to detec cross-correlated time-modulation of isotropic chemicals shifts
-
DOI 10.1023/B:JNMR.0000013705.98136.99
-
A. Majumdar, and R. Ghose Probing slow backbone dynamics in proteins using TROSY-based experiments to detect cross-correlated time-modulation of isotropic chemical shifts J. Biomol. NMR 28 2004 213 227 (Pubitemid 38220170)
-
(2004)
Journal of Biomolecular NMR
, vol.28
, Issue.3
, pp. 213-227
-
-
Majumdar, A.1
Ghose, R.2
-
73
-
-
0036873592
-
Differential multiple quantum relaxation caused by chemical exchange outside the fast exchange limit
-
DOI 10.1023/A:1021687604854
-
C. Wang, and A.G. Palmer Differential multiple quantum relaxation caused by chemical exchange outside the fast exchange limit J. Biomol. NMR 24 2002 263 268 (Pubitemid 36113652)
-
(2002)
Journal of Biomolecular NMR
, vol.24
, Issue.3
, pp. 263-268
-
-
Wang, C.1
Palmer III, A.G.2
-
74
-
-
0034728579
-
The static magnetic field dependence of chemical exchange linebroadening defines the NMR chemical shift time scale
-
DOI 10.1021/ja993511y
-
O. Millet, J.P. Loria, C.D. Kroenke, M. Pons, and A.G. Palmer The static magnetic field dependence of chemical exchange linebroadening defines the NMR chemical shift time scale J. Am. Chem. Soc. 122 2000 2867 2877 (Pubitemid 30191047)
-
(2000)
Journal of the American Chemical Society
, vol.122
, Issue.12
, pp. 2867-2877
-
-
Millet, O.1
Loria, J.P.2
Kroenke, C.D.3
Pons, M.4
Palmer III, A.G.5
-
75
-
-
0035695509
-
CPMG sequences with enhanced sensitivity to chemical exchange
-
DOI 10.1023/A:1013328206498
-
C.Y. Wang, M.J. Grey, and A.G. Palmer CPMG sequences with enhanced sensitivity to chemical exchange J. Biomol. NMR 21 2001 361 366 (Pubitemid 34071390)
-
(2001)
Journal of Biomolecular NMR
, vol.21
, Issue.4
, pp. 361-366
-
-
Wang, C.1
Grey, M.J.2
Palmer III, A.G.3
-
76
-
-
0034945906
-
Functional dynamics in the active site of the ribonuclease binase
-
DOI 10.1073/pnas.121069998
-
L. Wang, Y. Pang, T. Holder, J.R. Brender, A.V. Kurochkin, and E.R.P. Zuiderweg Functional dynamics in the active site of the ribonuclease binase Proc. Natl. Acad. Sci. U. S. A. 98 2001 7684 7689 (Pubitemid 32642621)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.14
, pp. 7684-7689
-
-
Wang, L.1
Pang, Y.2
Holder, T.3
Brender, J.R.4
Kurochkin, A.V.5
Zuiderweg, E.R.P.6
-
78
-
-
0000808109
-
Dynamic studies of a fibronectin type I module pair at three frequencies: Anisotropic modelling and direct determination of conformational exchange
-
I.Q.H. Phan, J. Boyd, and I.D. Campbell Dynamic studies of a fibronectin type I module pair at three frequencies: anisotropic modeling and direct determination of conformational exchange J. Biomol. NMR 8 1996 369 378 (Pubitemid 126706793)
-
(1996)
Journal of Biomolecular NMR
, vol.8
, Issue.4
, pp. 369-378
-
-
Phan, I.Q.H.1
Boyd, J.2
Campbell, I.D.3
-
79
-
-
0032511359
-
15N chemical shift anisotropy relaxation interference: Unambiguous determination of rotational diffusion tensors and chemical exchange effects in biological macromolecules
-
DOI 10.1021/ja980832l
-
15N chemical shift anisotropy relaxation interference: unambiguous determination of rotational diffusion tensors and chemical exchange effects in biological macromolecules J. Am. Chem. Soc. 120 1998 7905 7915 (Pubitemid 28392074)
-
(1998)
Journal of the American Chemical Society
, vol.120
, Issue.31
, pp. 7905-7915
-
-
Kroenke, C.D.1
Loria, J.P.2
Lee, L.K.3
Rance, M.4
Palmer III, A.G.5
-
80
-
-
0033003378
-
Microsecond time scale dynamics in the RXR DNA-binding domain from a combination of spin-echo and off-resonance rotating frame relaxation measurements
-
DOI 10.1023/A:1008354232281
-
F.A.A. Mulder, P.J.A. van Tilborg, R. Kaptein, and R. Boelens Microsecond time scale dynamics in the RXR DNA-binding domain from a combination of spin-echo and off-resonance rotating frame relaxation measurements J. Biomol. NMR 13 1999 275 288 (Pubitemid 29143534)
-
(1999)
Journal of Biomolecular NMR
, vol.13
, Issue.3
, pp. 275-288
-
-
Mulder, F.A.A.1
Van Tilborg, P.J.A.2
Kaptein, R.3
Boelens, R.4
-
81
-
-
84883552917
-
Enhanced accuracy of kinetic information from CT-CPMG experiments by transverse rotating-frame spectroscopy
-
D. Ban, A. Mazur, M.G. Carneiro, T.M. Sabo, K. Giller, L.M. Koharudin, S. Becker, A.M. Gronenborn, C. Griesinger, and D. Lee Enhanced accuracy of kinetic information from CT-CPMG experiments by transverse rotating-frame spectroscopy J. Biomol. NMR 57 2013 73 82
-
(2013)
J. Biomol. NMR
, vol.57
, pp. 73-82
-
-
Ban, D.1
Mazur, A.2
Carneiro, M.G.3
Sabo, T.M.4
Giller, K.5
Koharudin, L.M.6
Becker, S.7
Gronenborn, A.M.8
Griesinger, C.9
Lee, D.10
-
82
-
-
84865154985
-
15N relaxation rates in perdeuterated proteins by TROSY-based methods
-
15N relaxation rates in perdeuterated proteins by TROSY-based methods J. Biomol. NMR 53 2012 209 221
-
(2012)
J. Biomol. NMR
, vol.53
, pp. 209-221
-
-
Lakomek, N.A.1
Ying, J.2
Bax, A.3
-
83
-
-
33745642439
-
1ρ experiment with improved sensitivity for medium- and high-molecular-weight proteins
-
DOI 10.1021/ja061692f
-
1ρ experiment with improved sensitivity for medium- and high-molecular-weight proteins J. Am. Chem. Soc. 128 2006 8110 8111 (Pubitemid 43967735)
-
(2006)
Journal of the American Chemical Society
, vol.128
, Issue.25
, pp. 8110-8111
-
-
Igumenova, T.I.1
Palmer III, A.G.2
-
84
-
-
40949113653
-
Probing structure in invisible protein states with anisotropic NMR chemical shifts
-
DOI 10.1021/ja710817g
-
P. Vallurupalli, D.F. Hansen, and L.E. Kay Probing structure in invisible protein states with anisotropic NMR chemical shifts J. Am. Chem. Soc. 130 2008 2734 2735 (Pubitemid 351416215)
-
(2008)
Journal of the American Chemical Society
, vol.130
, Issue.9
, pp. 2734-2735
-
-
Vallurupalli, P.1
Hansen, D.F.2
Kay, L.E.3
-
85
-
-
81755177781
-
Kinetics of conformational sampling in ubiquitin
-
D. Ban, M. Funk, R. Gulich, D. Egger, T.M. Sabo, K.F. Walter, R.B. Fenwick, K. Giller, F. Pichierri, B.L. de Groot, O.F. Lange, H. Grubmuller, X. Salvatella, M. Wolf, A. Loidl, R. Kree, S. Becker, N.A. Lakomek, D. Lee, P. Lunkenheimer, and C. Griesinger Kinetics of conformational sampling in ubiquitin Angew. Chem., Int. Ed. Engl. 50 2011 11437 11440
-
(2011)
Angew. Chem., Int. Ed. Engl.
, vol.50
, pp. 11437-11440
-
-
Ban, D.1
Funk, M.2
Gulich, R.3
Egger, D.4
Sabo, T.M.5
Walter, K.F.6
Fenwick, R.B.7
Giller, K.8
Pichierri, F.9
De Groot, B.L.10
Lange, O.F.11
Grubmuller, H.12
Salvatella, X.13
Wolf, M.14
Loidl, A.15
Kree, R.16
Becker, S.17
Lakomek, N.A.18
Lee, D.19
Lunkenheimer, P.20
Griesinger, C.21
more..
-
87
-
-
0037355721
-
Extending the range of amide proton relaxation dispersion experiments in proteins using a constant-time relaxation-compensated CPMG approach
-
DOI 10.1023/A:1022851228405
-
R. Ishima, and D.A. Torchia Extending the range of amide proton relaxation dispersion experiments in protein using a constant-time relaxation-compensated CPMG approach J. Biomol. NMR 25 2003 243 248 (Pubitemid 36410588)
-
(2003)
Journal of Biomolecular NMR
, vol.25
, Issue.3
, pp. 243-248
-
-
Ishima, R.1
Torchia, D.A.2
-
88
-
-
27244449155
-
1ρ experiment permits accurate characterization of microsecond time-scale conformational exchange
-
DOI 10.1007/s10858-005-0658-y
-
1ρ experiment permits accurate characterization of microsecond time-scale conformational exchange J. Biomol. NMR 32 2005 281 293 (Pubitemid 41511510)
-
(2005)
Journal of Biomolecular NMR
, vol.32
, Issue.4
, pp. 281-293
-
-
Eichmuller, C.1
Skrynnikov, N.R.2
-
89
-
-
23344439330
-
Off-resonance rotating-frame amide proton spin relaxation experiments measuring microsecond chemical exchange in proteins
-
DOI 10.1007/s10858-005-5027-3
-
P. Lundström, and M. Akke Off-resonance rotating-frame amide proton spin relaxation experiments measuring microsecond chemical exchange in proteins J. Biomol. NMR 32 2005 163 173 (Pubitemid 41102319)
-
(2005)
Journal of Biomolecular NMR
, vol.32
, Issue.2
, pp. 163-173
-
-
Lundstrom, P.1
Akke, M.2
-
91
-
-
67749143936
-
Accurate measurement of α proton chemical shifts of excited protein states by relaxation dispersion NMR spectroscopy
-
P. Lundström, D.F. Hansen, P. Vallurupalli, and L.E. Kay Accurate measurement of α proton chemical shifts of excited protein states by relaxation dispersion NMR spectroscopy J. Am. Chem. Soc. 131 2009 1915 1926
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 1915-1926
-
-
Lundström, P.1
Hansen, D.F.2
Vallurupalli, P.3
Kay, L.E.4
-
94
-
-
39749156063
-
Probing chemical shifts of invisible states of proteins with relaxation dispersion NMR spectroscopy: How well can we do?
-
DOI 10.1021/ja078337p
-
D.F. Hansen, P. Vallurupalli, P. Lundström, P. Neudecker, and L.E. Kay Probing chemical shifts of invisible states of proteins with relaxation dispersion NMR spectroscopy: how well can we do? J. Am. Chem. Soc. 130 2008 2667 2675 (Pubitemid 351304782)
-
(2008)
Journal of the American Chemical Society
, vol.130
, Issue.8
, pp. 2667-2675
-
-
Hansen, D.F.1
Vallurupalli, P.2
Lundstrom, P.3
Neudecker, P.4
Kay, L.E.5
-
95
-
-
1842503159
-
Carbonyl carbon transverse relaxation dispersion measurements and ms-μ s timescale motion in a protein hydrogen bond network
-
DOI 10.1023/B:JNMR.0000019249.50306.5d
-
R. Ishima, J. Baber, J.M. Louis, and D.A. Torchia Carbonyl carbon transverse relaxation dispersion measurements and ms-μs timescale motion in a protein hydrogen bond network J. Biomol. NMR 29 2004 187 198 (Pubitemid 38444480)
-
(2004)
Journal of Biomolecular NMR
, vol.29
, Issue.2
, pp. 187-198
-
-
Ishima, R.1
Baber, J.2
Louis, J.M.3
Torchia, D.A.4
-
97
-
-
67649392285
-
13Cβ chemical shifts of invisible excited states in proteins by relaxation dispersion NMR spectroscopy
-
13Cβ chemical shifts of invisible excited states in proteins by relaxation dispersion NMR spectroscopy J. Biomol. NMR 44 2009 139 155
-
(2009)
J. Biomol. NMR
, vol.44
, pp. 139-155
-
-
Lundström, P.1
Lin, H.2
Kay, L.E.3
-
99
-
-
0034740288
-
13C relaxation studies of methyl dynamics of larger proteins
-
DOI 10.1023/A:1012482426306
-
13C relaxation studies of methyl dynamics of larger proteins J. Biomol. NMR 21 2001 167 171 (Pubitemid 33040164)
-
(2001)
Journal of Biomolecular NMR
, vol.21
, Issue.2
, pp. 167-171
-
-
Ishima, R.1
Louis, J.M.2
Torchia, D.A.3
-
100
-
-
1642416319
-
Probing Slow Dynamics in High Molecular Weight Proteins by Methyl-TROSY NMR Spectroscopy: Application to a 723-Residue Enzyme
-
DOI 10.1021/ja039587i
-
D.M. Korzhnev, K. Kloiber, V. Kanelis, V. Tugarinov, and L.E. Kay Probing slow dynamics in high molecular weight proteins by methyl-TROSY NMR spectroscopy: application to a 723-residue enzyme J. Am. Chem. Soc. 126 2004 3964 3973 (Pubitemid 38391889)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.12
, pp. 3964-3973
-
-
Korzhnev, D.M.1
Kloiber, K.2
Kanelis, V.3
Tugarinov, V.4
Kay, L.E.5
-
101
-
-
29444454319
-
Characterizing a partially folded intermediate of the villin headpiece domain under non-denaturing conditions: Contribution of His41 to the pH-dependent stability of the N-terminal subdomain
-
DOI 10.1016/j.jmb.2005.11.001, PII S0022283605013641
-
M.J. Grey, Y.F. Tang, E. Alexov, C.J. McKnight, D.P. Raleigh, and A.G. Palmer Characterizing a partially folded intermediate of the villin headpiece domain under non-denaturing conditions: contribution of His41 to the pH-dependent stability of the N-terminal subdomain J. Mol. Biol. 355 2006 1078 1094 (Pubitemid 43012149)
-
(2006)
Journal of Molecular Biology
, vol.355
, Issue.5
, pp. 1078-1094
-
-
Grey, M.J.1
Tang, Y.2
Alexov, E.3
McKnight, C.J.4
Raleigh, D.P.5
Palmer III, A.G.6
-
102
-
-
84871000000
-
Measurement of proton chemical shifts in invisible states of slowly exchanging protein systems by chemical exchange saturation transfer
-
G. Bouvignies, and L.E. Kay Measurement of proton chemical shifts in invisible states of slowly exchanging protein systems by chemical exchange saturation transfer J. Phys. Chem. B 116 2012 14311 14317
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 14311-14317
-
-
Bouvignies, G.1
Kay, L.E.2
-
103
-
-
84862061967
-
Studying "invisible" excited protein states in slow exchange with a major state conformation
-
P. Vallurupalli, G. Bouvignies, and L.E. Kay Studying "invisible" excited protein states in slow exchange with a major state conformation J. Am. Chem. Soc. 134 2012 8148 8161
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 8148-8161
-
-
Vallurupalli, P.1
Bouvignies, G.2
Kay, L.E.3
-
105
-
-
84864482745
-
Probing exchange kinetics and atomic resolution dynamics in high-molecular-weight complexes using dark-state exchange saturation transfer NMR spectroscopy
-
N.L. Fawzi, J. Ying, D.A. Torchia, and G.M. Clore Probing exchange kinetics and atomic resolution dynamics in high-molecular-weight complexes using dark-state exchange saturation transfer NMR spectroscopy Nat. Protoc. 7 2012 1523 1533
-
(2012)
Nat. Protoc.
, vol.7
, pp. 1523-1533
-
-
Fawzi, N.L.1
Ying, J.2
Torchia, D.A.3
Clore, G.M.4
-
106
-
-
79952782590
-
Chemical exchange saturation transfer (CEST): What is in a name and what isn't?
-
P.C. van Zijl, and N.N. Yadav Chemical exchange saturation transfer (CEST): what is in a name and what isn't? Magn. Reson. Med. 65 2011 927 948
-
(2011)
Magn. Reson. Med.
, vol.65
, pp. 927-948
-
-
Van Zijl, P.C.1
Yadav, N.N.2
-
107
-
-
80051700610
-
Using the water signal to detect invisible exchanging protons in the catalytic triad of a serine protease
-
C.B. Lauzon, P. van Zijl, and J.T. Stivers Using the water signal to detect invisible exchanging protons in the catalytic triad of a serine protease J. Biomol. NMR 50 2011 299 314
-
(2011)
J. Biomol. NMR
, vol.50
, pp. 299-314
-
-
Lauzon, C.B.1
Van Zijl, P.2
Stivers, J.T.3
-
108
-
-
84890117217
-
NMR studies of nucleic acid dynamics
-
H.M. Al-Hashimi NMR studies of nucleic acid dynamics J. Magn. Reson. 237 2013 191 204
-
(2013)
J. Magn. Reson.
, vol.237
, pp. 191-204
-
-
Al-Hashimi, H.M.1
-
109
-
-
0034664076
-
Active Site Dynamics in the Lead-Dependent Ribozyme
-
DOI 10.1021/bi0007627
-
C.G. Hoogstraten, J.R. Wank, and A. Pardi Active site dynamics in the lead-dependent ribozyme Biochemistry 39 2000 9951 9958 (Pubitemid 30626845)
-
(2000)
Biochemistry
, vol.39
, Issue.32
, pp. 9951-9958
-
-
Hoogstraten, C.G.1
Wank, J.R.2
Pardi, A.3
-
112
-
-
69249213368
-
15N-labeled elongated DNA for the study of sequence-directed dynamics by NMR
-
15N-labeled elongated DNA for the study of sequence-directed dynamics by NMR J. Biomol. NMR 45 2009 9 16
-
(2009)
J. Biomol. NMR
, vol.45
, pp. 9-16
-
-
Nikolova, E.N.1
Al-Hashimi, H.M.2
-
114
-
-
67849097652
-
NMR chemical exchange as a probe for ligand-binding kinetics in a theophylline-binding RNA aptamer
-
M.P. Latham, G.R. Zimmermann, and A. Pardi NMR chemical exchange as a probe for ligand-binding kinetics in a theophylline-binding RNA aptamer J. Am. Chem. Soc. 131 2009 5052 5053
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 5052-5053
-
-
Latham, M.P.1
Zimmermann, G.R.2
Pardi, A.3
-
115
-
-
79952177284
-
Transient Hoogsteen base pairs in canonical duplex DNA
-
498-U484
-
E.N. Nikolova, E. Kim, A.A. Wise, P.J. O'Brien, I. Andricioaei, and H.M. Al-Hashimi Transient Hoogsteen base pairs in canonical duplex DNA Nature 470 2011 498-U484
-
(2011)
Nature
, vol.470
-
-
Nikolova, E.N.1
Kim, E.2
Wise, A.A.3
O'Brien, P.J.4
Andricioaei, I.5
Al-Hashimi, H.M.6
-
116
-
-
84857725677
-
Probing transient Hoogsteen hydrogen bonds in canonical duplex DNA using NMR relaxation dispersion and single-atom substitution
-
E.N. Nikolova, F.L. Gottardo, and H.M. Al-Hashimi Probing transient Hoogsteen hydrogen bonds in canonical duplex DNA using NMR relaxation dispersion and single-atom substitution J. Am. Chem. Soc. 134 2012 3667 3670
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 3667-3670
-
-
Nikolova, E.N.1
Gottardo, F.L.2
Al-Hashimi, H.M.3
-
118
-
-
2442460927
-
Molecular dynamics analysis of NMR relaxation in a zinc-finger peptide
-
A.G. Palmer, and D.A. Case Molecular dynamics analysis of NMR relaxation in a zinc-finger peptide J. Am. Chem. Soc. 114 1992 9059 9067
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 9059-9067
-
-
Palmer, A.G.1
Case, D.A.2
-
120
-
-
0019960215
-
Protein dynamics and NMR relaxation: Comparison of simulations with experiment
-
DOI 10.1038/300197a0
-
G. Lipari, A. Szabo, and R.M. Levy Protein dynamics and NMR relaxation: comparison of simulations with experiment Nature 300 1982 197 198 (Pubitemid 12006355)
-
(1982)
Nature
, vol.300
, Issue.5888
, pp. 197-198
-
-
Lipari, G.1
Szabo, A.2
Levy, R.M.3
-
121
-
-
11644317128
-
Trajectory studies of NMR relaxation in flexible molecules
-
(Mol.-Based. Study Fluids)
-
R.M. Levy, and M. Karplus Trajectory studies of NMR relaxation in flexible molecules Adv. Chem. Ser. 204 1983 445 468 (Mol.-Based. Study Fluids)
-
(1983)
Adv. Chem. Ser.
, vol.204
, pp. 445-468
-
-
Levy, R.M.1
Karplus, M.2
-
122
-
-
0345306309
-
Disulfide Bond Isomerization in Basic Pancreatic Trypsin Inhibitor: Multisite Chemical Exchange Quantified by CPMG Relaxation Dispersion and Chemical Shift Modeling
-
DOI 10.1021/ja0367389
-
M.J. Grey, C.Y. Wang, and A.G. Palmer Disulfide bond isomerization in basic pancreatic trypsin inhibitor: multisite chemical exchange quantified by CPMG relaxation dispersion and chemical shift modeling J. Am. Chem. Soc. 125 2003 14324 14335 (Pubitemid 37452371)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.47
, pp. 14324-14335
-
-
Grey, M.J.1
Wang, C.2
Palmer III, A.G.3
-
123
-
-
84887288294
-
Thermal adaptation of conformational dynamics in ribonuclease H
-
K.A. Stafford, P. Robustelli, and A.G. Palmer Thermal adaptation of conformational dynamics in ribonuclease H PLoS Comput. Biol. 9 2013 e1003218
-
(2013)
PLoS Comput. Biol.
, vol.9
, pp. 1003218
-
-
Stafford, K.A.1
Robustelli, P.2
Palmer, A.G.3
-
124
-
-
84884268135
-
Characterization of the interdomain motions in hen lysozyme using residual dipolar couplings as replica-averaged structural restraints in molecular dynamics simulations
-
A. De Simone, R.W. Montalvao, C.M. Dobson, and M. Vendruscolo Characterization of the interdomain motions in hen lysozyme using residual dipolar couplings as replica-averaged structural restraints in molecular dynamics simulations Biochemistry 52 2013 6480 6486
-
(2013)
Biochemistry
, vol.52
, pp. 6480-6486
-
-
De Simone, A.1
Montalvao, R.W.2
Dobson, C.M.3
Vendruscolo, M.4
-
125
-
-
77955498721
-
Using NMR chemical shifts as structural restraints in molecular dynamics simulations of proteins
-
P. Robustelli, K. Kohlhoff, A. Cavalli, and M. Vendruscolo Using NMR chemical shifts as structural restraints in molecular dynamics simulations of proteins Structure 18 2010 923 933
-
(2010)
Structure
, vol.18
, pp. 923-933
-
-
Robustelli, P.1
Kohlhoff, K.2
Cavalli, A.3
Vendruscolo, M.4
-
126
-
-
77956501272
-
A transient and low-populated protein-folding intermediate at atomic resolution
-
D.M. Korzhnev, T.L. Religa, W. Banachewicz, A.R. Fersht, and L.E. Kay A transient and low-populated protein-folding intermediate at atomic resolution Science 329 2010 1312 1316
-
(2010)
Science
, vol.329
, pp. 1312-1316
-
-
Korzhnev, D.M.1
Religa, T.L.2
Banachewicz, W.3
Fersht, A.R.4
Kay, L.E.5
-
127
-
-
80052401629
-
Solution structure of a minor and transiently formed state of a T4 lysozyme mutant
-
G. Bouvignies, P. Vallurupalli, D.F. Hansen, B.E. Correia, O. Lange, A. Bah, R.M. Vernon, F.W. Dahlquist, D. Baker, and L.E. Kay Solution structure of a minor and transiently formed state of a T4 lysozyme mutant Nature 477 2011 111 114
-
(2011)
Nature
, vol.477
, pp. 111-114
-
-
Bouvignies, G.1
Vallurupalli, P.2
Hansen, D.F.3
Correia, B.E.4
Lange, O.5
Bah, A.6
Vernon, R.M.7
Dahlquist, F.W.8
Baker, D.9
Kay, L.E.10
-
128
-
-
84860013075
-
Structure of an intermediate state in protein folding and aggregation
-
P. Neudecker, P. Robustelli, A. Cavalli, P. Walsh, P. Lundstrom, A. Zarrine-Afsar, S. Sharpe, M. Vendruscolo, and L.E. Kay Structure of an intermediate state in protein folding and aggregation Science 336 2012 362 366
-
(2012)
Science
, vol.336
, pp. 362-366
-
-
Neudecker, P.1
Robustelli, P.2
Cavalli, A.3
Walsh, P.4
Lundstrom, P.5
Zarrine-Afsar, A.6
Sharpe, S.7
Vendruscolo, M.8
Kay, L.E.9
-
129
-
-
15744403441
-
A Markov model for relaxation and exchange in NMR spectroscopy
-
DOI 10.1021/jp0458304
-
D. Abergel, and A.G. Palmer A Markov model for relaxation and exchange in NMR spectroscopy J. Phys. Chem. B 109 2005 4837 4844 (Pubitemid 40407702)
-
(2005)
Journal of Physical Chemistry B
, vol.109
, Issue.11
, pp. 4837-4844
-
-
Abergel, D.1
Palmer III, A.G.2
-
130
-
-
84856728860
-
Microsecond time-scale conformational exchange in proteins: Using long molecular dynamics trajectory to simulate NMR relaxation dispersion data
-
Y. Xue, J.M. Ward, T. Yuwen, I.S. Podkorytov, and N.R. Skrynnikov Microsecond time-scale conformational exchange in proteins: using long molecular dynamics trajectory to simulate NMR relaxation dispersion data J. Am. Chem. Soc. 134 2012 2555 2562
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 2555-2562
-
-
Xue, Y.1
Ward, J.M.2
Yuwen, T.3
Podkorytov, I.S.4
Skrynnikov, N.R.5
-
131
-
-
77957937199
-
Atomic-level characterization of the structural dynamics of proteins
-
D.E. Shaw, P. Maragakis, K. Lindorff-Larsen, S. Piana, R.O. Dror, M.P. Eastwood, J.A. Bank, J.M. Jumper, J.K. Salmon, Y. Shan, and W. Wriggers Atomic-level characterization of the structural dynamics of proteins Science 330 2010 341 346
-
(2010)
Science
, vol.330
, pp. 341-346
-
-
Shaw, D.E.1
Maragakis, P.2
Lindorff-Larsen, K.3
Piana, S.4
Dror, R.O.5
Eastwood, M.P.6
Bank, J.A.7
Jumper, J.M.8
Salmon, J.K.9
Shan, Y.10
Wriggers, W.11
-
132
-
-
0027155345
-
Disulfide bond isomerization in BPTI and BPTI(G36S): An NMR study of correlated mobility in proteins
-
G. Otting, E. Liepinsh, and K. Wüthrich Disulfide bond isomerization in BPTI and BPTI(G36S): an NMR study of correlated mobility in proteins Biochemistry 32 1993 3571 3582 (Pubitemid 23126931)
-
(1993)
Biochemistry
, vol.32
, Issue.14
, pp. 3571-3582
-
-
Otting, G.1
Liepinsh, E.2
Wuthrich, K.3
-
133
-
-
0035941549
-
Aromatic ring-flipping in supercooled water: Implications for NMR-based structural biology of proteins
-
DOI 10.1021/ja003220l
-
J.J. Skalicky, J.L. Mills, S. Sharma, and T. Szyperski Aromatic ring-flipping in supercooled water: implications for NMR-based structural biology of proteins J. Am. Chem. Soc. 123 2001 388 397 (Pubitemid 32105128)
-
(2001)
Journal of the American Chemical Society
, vol.123
, Issue.3
, pp. 388-397
-
-
Skalicky, J.J.1
Mills, J.L.2
Sharma, S.3
Szyperski, T.4
-
134
-
-
0029994817
-
Using buried water molecules to explore the energy landscape of proteins
-
DOI 10.1038/nsb0696-505
-
V.P. Denisov, J. Peters, H.D. Horlein, and B. Halle Using buried water molecules to explore the energy landscape of proteins Nat. Struct. Biol. 3 1996 505 509 (Pubitemid 26174698)
-
(1996)
Nature Structural Biology
, vol.3
, Issue.6
, pp. 505-509
-
-
Denisov, V.P.1
Peters, J.2
Horlein, H.D.3
Halle, B.4
-
135
-
-
84862817200
-
Experimentally assessing molecular dynamics sampling of the protein native state conformational distribution
-
G. Hernandez, J.S. Anderson, and D.M. LeMaster Experimentally assessing molecular dynamics sampling of the protein native state conformational distribution Biophys. Chem. 163-164 2012 21 34
-
(2012)
Biophys. Chem.
, vol.163-164
, pp. 21-34
-
-
Hernandez, G.1
Anderson, J.S.2
Lemaster, D.M.3
-
136
-
-
84878943828
-
Transient access to the protein interior: Simulation versus NMR
-
F. Persson, and B. Halle Transient access to the protein interior: simulation versus NMR J. Am. Chem. Soc. 135 2013 8735 8748
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 8735-8748
-
-
Persson, F.1
Halle, B.2
-
138
-
-
78650901441
-
Concerted dynamics link allosteric sites in the PBX homeodomain
-
P.J. Farber, and A. Mittermaier Concerted dynamics link allosteric sites in the PBX homeodomain J. Mol. Biol. 405 2011 819 830
-
(2011)
J. Mol. Biol.
, vol.405
, pp. 819-830
-
-
Farber, P.J.1
Mittermaier, A.2
-
139
-
-
70849084011
-
Hidden dynamic allostery in a PDZ domain
-
C.M. Petit, J. Zhang, P.J. Sapienza, E.J. Fuentes, and A.L. Lee Hidden dynamic allostery in a PDZ domain Proc. Natl. Acad. Sci. U. S. A. 106 2009 18249 18254
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 18249-18254
-
-
Petit, C.M.1
Zhang, J.2
Sapienza, P.J.3
Fuentes, E.J.4
Lee, A.L.5
-
140
-
-
84880055385
-
A distal mutation perturbs dynamic amino acid networks in dihydrofolate reductase
-
D.D. Boehr, J.R. Schnell, D. McElheny, S.H. Bae, B.M. Duggan, S.J. Benkovic, H.J. Dyson, and P.E. Wright A distal mutation perturbs dynamic amino acid networks in dihydrofolate reductase Biochemistry 52 2013 4605 4619
-
(2013)
Biochemistry
, vol.52
, pp. 4605-4619
-
-
Boehr, D.D.1
Schnell, J.R.2
McElheny, D.3
Bae, S.H.4
Duggan, B.M.5
Benkovic, S.J.6
Dyson, H.J.7
Wright, P.E.8
-
141
-
-
33748363077
-
Dynamically driven protein allostery
-
DOI 10.1038/nsmb1132, PII NSMB1132
-
N. Popovych, S. Sun, R.H. Ebright, and C.G. Kalodimos Dynamically driven protein allostery Nat. Struct. Mol. Biol. 13 2006 831 838 (Pubitemid 44338778)
-
(2006)
Nature Structural and Molecular Biology
, vol.13
, Issue.9
, pp. 831-838
-
-
Popovych, N.1
Sun, S.2
Ebright, R.H.3
Kalodimos, C.G.4
-
142
-
-
68049093193
-
Direct observation of the dynamic process underlying allosteric signal transmission
-
S. Brüschweiler, P. Schanda, K. Kloiber, B. Brutscher, G. Kontaxis, R. Konrat, and M. Tollinger Direct observation of the dynamic process underlying allosteric signal transmission J. Am. Chem. Soc. 131 2009 3063 3068
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 3063-3068
-
-
Brüschweiler, S.1
Schanda, P.2
Kloiber, K.3
Brutscher, B.4
Kontaxis, G.5
Konrat, R.6
Tollinger, M.7
-
143
-
-
84855758929
-
Mechanisms of allosteric gene regulation by NMR quantification of microsecond-millisecond protein dynamics
-
I.R. Kleckner, P. Gollnick, and M.P. Foster Mechanisms of allosteric gene regulation by NMR quantification of microsecond-millisecond protein dynamics J. Mol. Biol. 415 2012 372 381
-
(2012)
J. Mol. Biol.
, vol.415
, pp. 372-381
-
-
Kleckner, I.R.1
Gollnick, P.2
Foster, M.P.3
-
145
-
-
79959326174
-
Measurement of protein unfolding/refolding kinetics and structural characterization of hidden intermediates by NMR relaxation dispersion
-
D.W. Meinhold, and P.E. Wright Measurement of protein unfolding/refolding kinetics and structural characterization of hidden intermediates by NMR relaxation dispersion Proc. Natl. Acad. Sci. U. S. A. 108 2011 9078 9083
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 9078-9083
-
-
Meinhold, D.W.1
Wright, P.E.2
-
146
-
-
35648945863
-
Φ-value analysis of a three-state protein folding pathway by NMR relaxation dispersion spectroscopy
-
DOI 10.1073/pnas.0705097104
-
P. Neudecker, A. Zarrine-Afsar, A.R. Davidson, and L.E. Kay φ-Value analysis of a three-state protein folding pathway by NMR relaxation dispersion spectroscopy Proc. Natl. Acad. Sci. U. S. A. 104 2007 15717 15722 (Pubitemid 350035366)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.40
, pp. 15717-15722
-
-
Neudecker, P.1
Zarrine-Afsar, A.2
Davidson, A.R.3
Kay, L.E.4
-
147
-
-
74949117361
-
φ-Value analysis for ultrafast folding proteins by NMR relaxation dispersion
-
J.-H. Cho, N. O'Connell, D.P. Raleigh, and A.G. Palmer φ-Value analysis for ultrafast folding proteins by NMR relaxation dispersion J. Am. Chem. Soc. 132 2010 450 451
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 450-451
-
-
Cho, J.-H.1
O'Connell, N.2
Raleigh, D.P.3
Palmer, A.G.4
-
148
-
-
0035937443
-
Two-state allosteric behavior in a single-domain signaling protein
-
DOI 10.1126/science.291.5512.2429
-
B.F. Volkman, D. Lipson, D.E. Wemmer, and D. Kern Two-state allosteric behavior in a single-domain signaling protein Science 291 2001 2429 2433 (Pubitemid 32231808)
-
(2001)
Science
, vol.291
, Issue.5512
, pp. 2429-2433
-
-
Volkman, B.F.1
Lipson, D.2
Wemmer, D.E.3
Kern, D.4
-
149
-
-
69549120472
-
Conformational selection or induced fit: A flux description of reaction mechanism
-
G.G. Hammes, Y.C. Chang, and T.G. Oas Conformational selection or induced fit: a flux description of reaction mechanism Proc. Natl. Acad. Sci. U. S. A. 106 2009 13737 13741
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 13737-13741
-
-
Hammes, G.G.1
Chang, Y.C.2
Oas, T.G.3
-
150
-
-
34250821717
-
Mechanism of coupled folding and binding of an intrinsically disordered protein
-
DOI 10.1038/nature05858, PII NATURE05858
-
K. Sugase, H.J. Dyson, and P.E. Wright Mechanism of coupled folding and binding of an intrinsically disordered protein Nature 447 2007 1021 1025 (Pubitemid 46975749)
-
(2007)
Nature
, vol.447
, Issue.7147
, pp. 1021-1025
-
-
Sugase, K.1
Dyson, H.J.2
Wright, P.E.3
-
151
-
-
79955608042
-
Tuning protein autoinhibition by domain destabilization
-
J.-H. Cho, V. Muralidharan, M. Vila-Perello, D.P. Raleigh, T.W. Muir, and A.G. Palmer Tuning protein autoinhibition by domain destabilization Nat. Struct. Mol. Biol. 18 2011 550 555
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 550-555
-
-
Cho, J.-H.1
Muralidharan, V.2
Vila-Perello, M.3
Raleigh, D.P.4
Muir, T.W.5
Palmer, A.G.6
-
152
-
-
84879411842
-
Allosteric inhibition through suppression of transient conformational states
-
S.-R. Tzeng, and C.G. Kalodimos Allosteric inhibition through suppression of transient conformational states Nat. Chem. Biol. 9 2013 462 465
-
(2013)
Nat. Chem. Biol.
, vol.9
, pp. 462-465
-
-
Tzeng, S.-R.1
Kalodimos, C.G.2
-
153
-
-
76549109225
-
Millisecond timescale fluctuations in dihydrofolate reductase are exquisitely sensitive to the bound ligands
-
D.D. Boehr, D. McElheny, H.J. Dyson, and P.E. Wright Millisecond timescale fluctuations in dihydrofolate reductase are exquisitely sensitive to the bound ligands Proc. Natl. Acad. Sci. U. S. A. 107 2010 1373 1378
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 1373-1378
-
-
Boehr, D.D.1
McElheny, D.2
Dyson, H.J.3
Wright, P.E.4
-
154
-
-
79953823548
-
A dynamic knockout reveals that conformational fluctuations influence the chemical step of enzyme catalysis
-
G. Bhabha, J. Lee, D.C. Ekiert, J. Gam, I.A. Wilson, H.J. Dyson, S.J. Benkovic, and P.E. Wright A dynamic knockout reveals that conformational fluctuations influence the chemical step of enzyme catalysis Science 332 2011 234 238
-
(2011)
Science
, vol.332
, pp. 234-238
-
-
Bhabha, G.1
Lee, J.2
Ekiert, D.C.3
Gam, J.4
Wilson, I.A.5
Dyson, H.J.6
Benkovic, S.J.7
Wright, P.E.8
-
155
-
-
27744499156
-
Intrinsic dynamics of an enzyme underlies catalysis
-
DOI 10.1038/nature04105, PII N04105
-
E.Z. Eisenmesser, O. Millet, W. Labeikovsky, D.M. Korzhnev, M. Wolf-Watz, D.A. Bosco, J.J. Skalicky, L.E. Kay, and D. Kern Intrinsic dynamics of an enzyme underlies catalysis Nature 438 2005 117 121 (Pubitemid 41599831)
-
(2005)
Nature
, vol.438
, Issue.7064
, pp. 117-121
-
-
Eisenmesser, E.Z.1
Millet, O.2
Labeikovsky, W.3
Korzhnev, D.M.4
Wolf-Watz, M.5
Bosco, D.A.6
Skalicky, J.J.7
Kay, L.E.8
Kern, D.9
-
156
-
-
33947144085
-
Structure and Dynamics of Pin1 During Catalysis by NMR
-
DOI 10.1016/j.jmb.2007.01.049, PII S0022283607001015
-
W. Labeikovsky, E.Z. Eisenmesser, D.A. Bosco, and D. Kern Structure and dynamics of Pin1 during catalysis by NMR J. Mol. Biol. 367 2007 1370 1381 (Pubitemid 46413270)
-
(2007)
Journal of Molecular Biology
, vol.367
, Issue.5
, pp. 1370-1381
-
-
Labeikovsky, W.1
Eisenmesser, E.Z.2
Bosco, D.A.3
Kern, D.4
-
157
-
-
77951226274
-
At the dawn of the 21st century: Is dynamics the missing link for understanding enzyme catalysis?
-
S.C. Kamerlin, and A. Warshel At the dawn of the 21st century: is dynamics the missing link for understanding enzyme catalysis? Proteins 78 2010 1339 1375
-
(2010)
Proteins
, vol.78
, pp. 1339-1375
-
-
Kamerlin, S.C.1
Warshel, A.2
-
159
-
-
80052149070
-
Catalysis by dihydrofolate reductase and other enzymes arises from electrostatic preorganization, not conformational motions
-
A.J. Adamczyk, J. Cao, S.C. Kamerlin, and A. Warshel Catalysis by dihydrofolate reductase and other enzymes arises from electrostatic preorganization, not conformational motions Proc. Natl. Acad. Sci. U. S. A. 108 2011 14115 14120
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 14115-14120
-
-
Adamczyk, A.J.1
Cao, J.2
Kamerlin, S.C.3
Warshel, A.4
-
160
-
-
80755187533
-
The feasibility of parameterizing four-state equilibria using relaxation dispersion measurements
-
P. Li, I.R. Martins, and M.K. Rosen The feasibility of parameterizing four-state equilibria using relaxation dispersion measurements J. Biomol. NMR 51 2011 57 70
-
(2011)
J. Biomol. NMR
, vol.51
, pp. 57-70
-
-
Li, P.1
Martins, I.R.2
Rosen, M.K.3
-
161
-
-
13444269041
-
Computer-optimized decoupling scheme for wideband applications and low-level operation
-
A.J. Shaka, P.B. Barker, and R. Freeman Computer-optimized decoupling scheme for wideband applications and low-level operation J. Magn. Reson. 64 1985 547 552
-
(1985)
J. Magn. Reson.
, vol.64
, pp. 547-552
-
-
Shaka, A.J.1
Barker, P.B.2
Freeman, R.3
-
162
-
-
45249127991
-
Rapid recording of 2D NMR spectra without phase cycling. Application to the study of hydrogen exchange in proteins
-
D. Marion, M. Ikura, R. Tschudin, and A. Bax Rapid recording of 2D NMR spectra without phase cycling. Application to the study of hydrogen exchange in proteins J. Magn. Reson. 85 1989 393 399
-
(1989)
J. Magn. Reson.
, vol.85
, pp. 393-399
-
-
Marion, D.1
Ikura, M.2
Tschudin, R.3
Bax, A.4
-
163
-
-
0000987483
-
An Off-resonance Rotating Frame Relaxation Experiment for the Investigation of Macromolecular Dynamics Using Adiabatic Rotations
-
F.A.A. Mulder, R.A. de Graaf, R. Kaptein, and R. Boelens An off-resonance rotating frame relaxation experiment for the investigation of macromolecular dynamics using adiabatic rotations J. Magn. Reson. 131 1998 351 357 (Pubitemid 128450575)
-
(1998)
Journal of Magnetic Resonance
, vol.131
, Issue.2
, pp. 351-357
-
-
Mulder, F.A.A.1
De Graaf, R.A.2
Kaptein, R.3
Boelens, R.4
-
164
-
-
0006925492
-
Pure absorption gradient enhanced heteronuclear single quantum correlation spectroscopy with improved sensitivity
-
L.E. Kay, P. Keifer, and T. Saarinen Pure absorption gradient enhanced heteronuclear single quantum correlation spectroscopy with improved sensitivity J. Am. Chem. Soc. 114 1992 10663 10665
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 10663-10665
-
-
Kay, L.E.1
Keifer, P.2
Saarinen, T.3
|