13CHD2 Methyl group probes of millisecond time scale exchange in proteins by 1H relaxation dispersion: An application to proteasome gating residue dynamics

Journal of the American Chemical Society

Volumn 132, Issue 32, 2010, Pages 10992-10995

  Baldwin, Andrew J ^a   Religa, Tomasz L ^a   Hansen, D Flemming ^a   Bouvignies, Guillaume ^a   Kay, Lewis E ^a  

^a UNIVERSITY OF TORONTO   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ACIDIPHILIUM; CHEMICAL EXCHANGE; DISPERSION PROFILE; EXCHANGE PARAMETERS; INTERCONVERSIONS; ISOTOPOMERS; METHYL GROUP; PROTEASOMES; PROTON TRANSITIONS; RELAXATION DISPERSION; TIME-SCALES;

HYDROCARBONS; PROBES; PROTEINS; TIME MEASUREMENT;

DISPERSIONS;

METHYL GROUP; PROTEASOME;

ARTICLE; EXTRACTION; MEASUREMENT; MECHANICAL PROBE; METHODOLOGY; MOLECULAR DYNAMICS; NONHUMAN; PROTON NUCLEAR MAGNETIC RESONANCE; QUANTITATIVE ANALYSIS; THERMOPLASMA ACIDOPHILUM;

DEUTERIUM; KINETICS; METHANE; MODELS, MOLECULAR; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEASOME ENDOPEPTIDASE COMPLEX; PROTEIN CONFORMATION; THERMOPLASMA;

EID: 77955567725     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja104578n     Document Type: Article

References (30)

1. Ruschak, A. M. and Kay, L. E. J. Biomol. NMR 2010, 46, 75-87
2. Tugarinov, V. and Kay, L. E. ChemBioChem 2005, 6, 1567-77
3. Gelis, I., Bonvin, A. M., Keramisanou, D., Koukaki, M., Gouridis, G., Karamanou, S., Economou, A., and Kalodimos, C. G. Cell 2007, 131, 756-69
4. Kay, L. E. and Torchia, D. A. J. Magn. Reson. 1991, 95, 536-547
5. Tugarinov, V., Hwang, P., Ollerenshaw, J., and Kay, L. E. J. Am. Chem. Soc. 2003, 125, 10420-10428
6. Sprangers, R. and Kay, L. E. Nature 2007, 445, 618-22
7. Amero, C., Schanda, P., Dura, M. A., Ayala, I., Marion, D., Franzetti, B., Brutscher, B., and Boisbouvier, J. J. Am. Chem. Soc. 2009, 131, 3448-9
8. Kreishman-Deitrick, M., Goley, E. D., Burdine, L., Denison, C., Egile, C., Li, R., Murali, N., Kodadek, T. J., Welch, M. D., and Rosen, M. K. Biochemistry 2005, 44, 15247-56
9. Palmer, A. G., Kroenke, C. D., and Loria, J. P. Methods Enzymol. 2001, 339, 204-238
10. Korzhnev, D. M., Mittermaier, A. K., and Kay, L. E. J Biomol NMR 2005, 31, 337-42
11. Tugarinov, V. and Kay, L. E. J. Am. Chem. Soc. 2007, 129, 9514-21
12. Religa, T. L. and Kay, L. E. J. Biomol. NMR 2010, 47, 163 - 169.
13. Vallurupalli, P., Hansen, D. F., Stollar, E. J., Meirovitch, E., and Kay, L. E. Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 18473-18477
14. Mulder, F. A. A., Skrynnikov, N. R., Hon, B., Dahlquist, F. W., and Kay, L. E. J. Am. Chem. Soc. 2001, 123, 967-975
15. Hansen, D. F., Vallurupalli, P., and Kay, L. E. J. Phys. Chem. 2008, 112, 5898-5904
16. Cavanagh, J. and Rance, M. Ann. Rep. NMR Spectrosc. 1993, 27, 1-58
17. Kay, L. E., Keifer, P., and Saarinen, T. J. Am. Chem. Soc. 1992, 114, 10663-10665
18. Schleucher, J., Schwendinger, M., Sattler, M., Schmidt, P., Schedletzky, O., Glaser, S. J., Sorensen, O. W., and Griesinger, C. J. Biomol. NMR 1994, 4, 301-306
19. Madi, Z. L., Brutscher, B., Schulteherbruggen, T., Bruschweiler, R., and Ernst, R. R. Chem. Phys. Lett. 1997, 268, 300-305
20. Loria, J. P., Rance, M., and Palmer, A. G. J. Am. Chem. Soc. 1999, 121, 2331-2332
21. Palmer, A. G., Skelton, N. J., Chazin, W. J., Wright, P. E., and Rance, M. Mol. Phys. 1992, 75, 699-711
22. Cavanagh, J., Fairbrother, W. J., Palmer, A. G., and Skelton, N. J. Protein NMR Spectroscopy: Principles and Practice; Academic Press: San Diego, 1996.
23. Baldwin, A. J., Hansen, D. F., Vallurupalli, P., and Kay, L. E. J. Am. Chem. Soc. 2009, 131, 11939-48
24. Sprangers, R., Li, X., Mao, X., Rubinstein, J. L., Schimmer, A. D., and Kay, L. E. Biochemistry 2008, 47, 6727-34
25. Religa, T. L., Sprangers, R., and Kay, L. E. Science 2010, 328, 98-102
26. Lundstrom, P., Vallurupalli, P., Religa, T. L., Dahlquist, F. W., and Kay, L. E. J. Biomol. NMR 2007, 38, 79-88
27. Shaka, A. J., Lee, C. J., and Pines, A. J. Magn. Reson. 1988, 77, 274
28. Shaka, A. J., Keeler, J., Frenkiel, T., and Freeman, R. J. Magn. Reson. 1983, 52, 335-338
29. Skrynnikov, N. R., Dahlquist, F. W., and Kay, L. E. J. Am. Chem. Soc. 2002, 124, 12352-60
30. Lowe, J., Stock, D., Jap, B., Zwickl, P., Baumeister, W., and Huber, R. Science 1995, 268, 533-9