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Volumn 12, Issue 12, 2013, Pages 948-962

Chemical predictive modelling to improve compound quality

Author keywords

[No Author keywords available]

Indexed keywords

BETA 2 ADRENERGIC RECEPTOR STIMULATING AGENT; DONEPEZIL; DOPAMINE 2 RECEPTOR STIMULATING AGENT; POTASSIUM CHANNEL BLOCKING AGENT; POTASSIUM CHANNEL HERG; POTASSIUM CHANNEL KCNE1; POTASSIUM CHANNEL KCNQ1; SIBENADET; TRANSIENT RECEPTOR POTENTIAL CHANNEL A1; TRANSIENT RECEPTOR POTENTIAL CHANNEL AFFECTING AGENT;

EID: 84889581795     PISSN: 14741776     EISSN: 14741784     Source Type: Journal    
DOI: 10.1038/nrd4128     Document Type: Review
Times cited : (230)

References (113)
  • 1
    • 77649234756 scopus 로고    scopus 로고
    • How to improve R&D productivity: The pharmaceutical industry's grand challenge
    • Paul, S. M. et al. How to improve R&D productivity: The pharmaceutical industry's grand challenge. Nature Rev. Drug Discov. 9, 203-214 (2010
    • (2010) Nature Rev. Drug Discov , vol.9 , pp. 203-214
    • Paul, S.M.1
  • 2
    • 84860690620 scopus 로고    scopus 로고
    • Can the flow of medicines be improved? Fundamental pharmacokinetic and pharmacological principles toward improving Phase II survival
    • Morgan, P. et al. Can the flow of medicines be improved? Fundamental pharmacokinetic and pharmacological principles toward improving Phase II survival. Drug Discov. Today 17, 419-424 (2012
    • (2012) Drug Discov. Today , vol.17 , pp. 419-424
    • Morgan, P.1
  • 3
    • 0037364162 scopus 로고    scopus 로고
    • ADMET in silico modelling: Towards prediction paradise?
    • van de Waterbeemd, H. & Gifford, E. ADMET in silico modelling: Towards prediction paradise? Nature Rev. Drug Discov. 2, 192-204 (2003
    • (2003) Nature Rev. Drug Discov , vol.2 , pp. 192-204
    • Van De Waterbeemd, H.1    Gifford, E.2
  • 4
    • 0031024171 scopus 로고    scopus 로고
    • Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
    • Lipinski, C. A., Lombardo, F., Dominy, B. W. & Feeney, P. J. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv. Drug Deliv. Rev. 23, 3-25 (1997
    • (1997) Adv. Drug Deliv. Rev , vol.23 , pp. 3-25
    • Lipinski, C.A.1    Lombardo, F.2    Dominy, B.W.3    Feeney, P.J.4
  • 6
    • 2942564021 scopus 로고    scopus 로고
    • Pursuing the leadlikeness concept in pharmaceutical research
    • Hann, M. M. & Oprea, T. I. Pursuing the leadlikeness concept in pharmaceutical research. Curr. Opin. Chem. Biol. 8, 255-263 (2004
    • (2004) Curr. Opin. Chem. Biol , vol.8 , pp. 255-263
    • Hann, M.M.1    Oprea, T.I.2
  • 8
    • 84856405594 scopus 로고    scopus 로고
    • Going further than Lipinski's rule in drug design
    • Walters, W. P. Going further than Lipinski's rule in drug design. Expert Opin. Drug Discov. 7, 99-107 (2012
    • (2012) Expert Opin. Drug Discov , vol.7 , pp. 99-107
    • Walters, W.P.1
  • 9
    • 0141726877 scopus 로고    scopus 로고
    • A rule of three for fragment-based lead discovery?
    • Congreve, M., Carr, R., Murray, C. & Jhoti, H. A 'rule of three' for fragment-based lead discovery? Drug Discov. Today 8, 876-877 (2003
    • (2003) Drug Discov. Today , vol.8 , pp. 876-877
    • Congreve, M.1    Carr, R.2    Murray, C.3    Jhoti, H.4
  • 10
    • 77953680038 scopus 로고    scopus 로고
    • Defining desirable central nervous system drug space through the alignment of molecular properties, in vitro ADME, and safety attributes
    • Wager, T. T. et al. Defining desirable central nervous system drug space through the alignment of molecular properties, in vitro ADME, and safety attributes. ACS Chem. Neurosci. 1, 420-434 (2010
    • (2010) ACS Chem. Neurosci , vol.1 , pp. 420-434
    • Wager, T.T.1
  • 11
    • 39749181550 scopus 로고    scopus 로고
    • Generation of a set of simple, interpretable ADMET rules of thumb
    • Gleeson, M. P. Generation of a set of simple, interpretable ADMET rules of thumb. J. Med. Chem. 51, 817-834 (2008
    • (2008) J. Med. Chem , vol.51 , pp. 817-834
    • Gleeson, M.P.1
  • 12
    • 49849094738 scopus 로고    scopus 로고
    • Physiochemical drug properties associated with in vivo toxicological outcomes
    • Hughes, J. D. et al. Physiochemical drug properties associated with in vivo toxicological outcomes. Bioorg. Med. Chem. Lett. 18, 4872-4875 (2008
    • (2008) Bioorg. Med. Chem. Lett , vol.18 , pp. 4872-4875
    • Hughes, J.D.1
  • 13
    • 9744232909 scopus 로고    scopus 로고
    • Time-related differences in the physical property profiles of oral drugs
    • Leeson, P. D. & Davis, A. M. Time-related differences in the physical property profiles of oral drugs. J. Med. Chem. 47, 6338-6348 (2004
    • (2004) J. Med. Chem , vol.47 , pp. 6338-6348
    • Leeson, P.D.1    Davis, A.M.2
  • 14
    • 0035324944 scopus 로고    scopus 로고
    • Molecular complexity and its impact on the probability of finding leads for drug discovery
    • Hann, M. M., Leach, A. R. & Harper, G. Molecular complexity and its impact on the probability of finding leads for drug discovery. J. Chem. Inf. Comput. Sci. 41, 856-864 (2001
    • (2001) J. Chem. Inf. Comput. Sci , vol.41 , pp. 856-864
    • Hann, M.M.1    Leach, A.R.2    Harper, G.3
  • 15
    • 41549115075 scopus 로고    scopus 로고
    • Assessing drug-likeness - What are we missing?
    • Vistoli, G., Pedretti, A. & Testa, B. Assessing drug-likeness - What are we missing? Drug Discov. Today 13, 285-294 (2008
    • (2008) Drug Discov. Today , vol.13 , pp. 285-294
    • Vistoli, G.1    Pedretti, A.2    Testa, B.3
  • 16
    • 0021745755 scopus 로고
    • Functional group contributions to drug-receptor interactions
    • Andrews, P. R., Craik, D. J. & Martin, J. L. Functional group contributions to drug-receptor interactions. J. Med. Chem. 27, 1648-1657 (1984
    • (1984) J. Med. Chem , vol.27 , pp. 1648-1657
    • Andrews, P.R.1    Craik, D.J.2    Martin, J.L.3
  • 18
    • 35748934487 scopus 로고    scopus 로고
    • The influence of drug-like concepts on decision-making in medicinal chemistry
    • Leeson, P. D. & Springthorpe, B. The influence of drug-like concepts on decision-making in medicinal chemistry. Nature Rev. Drug Discov. 6, 881-890 (2007
    • (2007) Nature Rev. Drug Discov , vol.6 , pp. 881-890
    • Leeson, P.D.1    Springthorpe, B.2
  • 19
    • 61649109015 scopus 로고    scopus 로고
    • The influence of lead discovery strategies on the properties of drug candidates
    • Keseru, G. M. & Makara, G. M. The influence of lead discovery strategies on the properties of drug candidates. Nature Rev. Drug Discov. 8, 203-212 (2009
    • (2009) Nature Rev. Drug Discov , vol.8 , pp. 203-212
    • Keseru, G.M.1    Makara, G.M.2
  • 21
    • 80053471789 scopus 로고    scopus 로고
    • The influence of the organizational factor on compound quality in drug discovery
    • Leeson, P. D. & St Gallay, S. The influence of the 'organizational factor' on compound quality in drug discovery. Nature Rev. Drug Discov. 10, 749-765 (2011
    • (2011) Nature Rev. Drug Discov , vol.10 , pp. 749-765
    • Leeson, P.D.1    St Gallay, S.2
  • 22
    • 84856846240 scopus 로고    scopus 로고
    • Impact of lipophilic efficiency on compound quality
    • Tarcsay, A., Nyiri, K. & Keseru, G. M. Impact of lipophilic efficiency on compound quality. J. Med. Chem. 55, 1252-1260 (2012
    • (2012) J. Med. Chem , vol.55 , pp. 1252-1260
    • Tarcsay, A.1    Nyiri, K.2    Keseru, G.M.3
  • 23
    • 84876239285 scopus 로고    scopus 로고
    • Correction to impact of lipophilic efficiency on compound quality
    • Tarcsay, A., Nyiri, K. & Keseru, G. M. Correction to impact of lipophilic efficiency on compound quality. J. Med. Chem. 56, 3120 (2013
    • (2013) J. Med. Chem , vol.56 , pp. 3120
    • Tarcsay, A.1    Nyiri, K.2    Keseru, G.M.3
  • 24
    • 0030756360 scopus 로고    scopus 로고
    • Reactive compounds and in vitro false positives in HTS
    • Gilbert, M. R. Reactive compounds and in vitro false positives in HTS. Drug Discov. Today 2, 382-384 (1997
    • (1997) Drug Discov. Today , vol.2 , pp. 382-384
    • Gilbert, M.R.1
  • 25
    • 77950571108 scopus 로고    scopus 로고
    • New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays
    • Baell, J. B. & Holloway, G. A. New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays. J. Med. Chem. 53, 2719-2740 (2010
    • (2010) J. Med. Chem , vol.53 , pp. 2719-2740
    • Baell, J.B.1    Holloway, G.A.2
  • 29
    • 84889585957 scopus 로고    scopus 로고
    • eds Aki-Sener, E. & Yalcin, I. 3-22 (Proceedings of the 15th European Symposium on Structure-Activity Relationships (QSAR) and Molecular Modelling
    • Hansch, C. in QSAR and Molecular Modelling in Rational Design of Bioactive Molecules: Programs and Abstracts (eds Aki-Sener, E. & Yalcin, I.) 3-22 (Proceedings of the 15th European Symposium on Structure-Activity Relationships (QSAR) and Molecular Modelling, 2006
    • (2006) QSAR and Molecular Modelling in Rational Design of Bioactive Molecules: Programs and Abstracts
    • Hansch, C.1
  • 30
    • 79953823573 scopus 로고    scopus 로고
    • Why QSAR fails: An empirical evaluation using conventional computational approach
    • Huang, J. & Fan, X. Why QSAR fails: An empirical evaluation using conventional computational approach. Mol. Pharm. 8, 600-608 (2011
    • (2011) Mol. Pharm , vol.8 , pp. 600-608
    • Huang, J.1    Fan, X.2
  • 32
    • 0042416598 scopus 로고    scopus 로고
    • In silico ADME/Tox: Why models fail
    • Stouch, T. R. et al. In silico ADME/Tox: Why models fail. J. Comput. Aided Mol. Des. 17, 83-92 (2003
    • (2003) J. Comput. Aided Mol. Des , vol.17 , pp. 83-92
    • Stouch, T.R.1
  • 35
    • 84863531180 scopus 로고    scopus 로고
    • Towards a gold standard: Regarding quality in public domain chemistry databases and approaches to improving the situation
    • Williams, A. J., Ekins, S. & Tkachenko, V. Towards a gold standard: Regarding quality in public domain chemistry databases and approaches to improving the situation. Drug Discov. Today 17, 685-701 (2012
    • (2012) Drug Discov. Today , vol.17 , pp. 685-701
    • Williams, A.J.1    Ekins, S.2    Tkachenko, V.3
  • 36
    • 33745686478 scopus 로고    scopus 로고
    • QSAR/QSPR and proprietary data
    • Jorgensen, W. L. QSAR/QSPR and proprietary data. J. Chem. Inf. Model. 46, 937 (2006
    • (2006) J. Chem. Inf. Model , vol.46 , pp. 937
    • Jorgensen, W.L.1
  • 38
    • 54249125512 scopus 로고    scopus 로고
    • Critical assessment of QSAR models of environmental toxicity against Tetrahymena pyriformis: Focusing on applicability domain and overfitting by variable selection
    • Tetko, I. V. et al. Critical assessment of QSAR models of environmental toxicity against Tetrahymena pyriformis: Focusing on applicability domain and overfitting by variable selection. J. Chem. Inf. Model. 48, 1733-1746 (2008
    • (2008) J. Chem. Inf. Model , vol.48 , pp. 1733-1746
    • Tetko, I.V.1
  • 39
    • 84861521242 scopus 로고    scopus 로고
    • Comparison of different approaches to define the applicability domain of QSAR models
    • Sahigara, F. et al. Comparison of different approaches to define the applicability domain of QSAR models. Molecules 17, 4791-4810 (2012
    • (2012) Molecules , vol.17 , pp. 4791-4810
    • Sahigara, F.1
  • 40
    • 33746931581 scopus 로고    scopus 로고
    • On outliers and activity cliffs - Why QSAR often disappoints
    • Maggiora, G. M. On outliers and activity cliffs - Why QSAR often disappoints. J. Chem. Inf. Model. 46, 1535 (2006
    • (2006) J. Chem. Inf. Model , vol.46 , pp. 1535
    • Maggiora, G.M.1
  • 42
    • 20844451562 scopus 로고    scopus 로고
    • An automated PLS search for biologically relevant QSAR descriptors
    • Olah, M., Bologa, C. & Oprea, T. I. An automated PLS search for biologically relevant QSAR descriptors. J. Comput. Aided Mol. Des. 18, 437-449 (2004
    • (2004) J. Comput. Aided Mol. Des , vol.18 , pp. 437-449
    • Olah, M.1    Bologa, C.2    Oprea, T.I.3
  • 43
    • 80051551297 scopus 로고    scopus 로고
    • Online chemical modeling environment (OCHEM): Web platform for data storage, model development and publishing of chemical information
    • Sushko, I. et al. Online chemical modeling environment (OCHEM): Web platform for data storage, model development and publishing of chemical information. J. Comput. Aided Mol. Des. 25, 533-554 (2011
    • (2011) J. Comput. Aided Mol. Des , vol.25 , pp. 533-554
    • Sushko, I.1
  • 44
    • 34249108530 scopus 로고    scopus 로고
    • Competitive workflow: Novel software architecture for automating drug design
    • Cartmell, J., Krstajic, D. & Leahy, D. E. Competitive workflow: Novel software architecture for automating drug design. Curr. Opin. Drug Discov. Devel. 10, 347-352 (2007
    • (2007) Curr. Opin. Drug Discov. Devel , vol.10 , pp. 347-352
    • Cartmell, J.1    Krstajic, D.2    Leahy, D.E.3
  • 45
    • 84859536904 scopus 로고    scopus 로고
    • ChemModLab: A web-based cheminformatics modeling laboratory
    • Hughes-Oliver, J. M. et al. ChemModLab: A web-based cheminformatics modeling laboratory. In Silico Biol. 11, 61-81 (2011
    • (2011) Silico Biol , vol.11 , pp. 61-81
    • Hughes-Oliver, J.M.1
  • 46
    • 44249091638 scopus 로고    scopus 로고
    • Automatic QSAR modeling of ADME properties: Blood-brain barrier penetration and aqueous solubility
    • Obrezanova, O., Gola, J. M., Champness, E. J. & Segall, M. D. Automatic QSAR modeling of ADME properties: Blood-brain barrier penetration and aqueous solubility. J. Comput. Aided Mol. Des. 22, 431-440 (2008
    • (2008) J. Comput. Aided Mol. Des , vol.22 , pp. 431-440
    • Obrezanova, O.1    Gola, J.M.2    Champness, E.J.3    Segall, M.D.4
  • 49
    • 83455163851 scopus 로고    scopus 로고
    • Automated QSAR with a hierarchy of global and local models
    • Wood, D. J. et al. Automated QSAR with a hierarchy of global and local models. Mol. Inform. 30, 960-972 (2011
    • (2011) Mol. Inform , vol.30 , pp. 960-972
    • Wood, D.J.1
  • 50
    • 84874425276 scopus 로고    scopus 로고
    • Interpretable probability-based confidence metric for continuous quantitative structure-activity relationship models
    • Keefer, C. E., Kauffman, G. W. & Gupta, R. R. Interpretable, probability-based confidence metric for continuous quantitative structure-activity relationship models. J. Chem. Inf. Model. 53, 368-383 (2013
    • (2013) J. Chem. Inf. Model , vol.53 , pp. 368-383
    • Keefer, C.E.1    Kauffman, G.W.2    Gupta, R.R.3
  • 51
    • 61949191968 scopus 로고    scopus 로고
    • Sharpening the toolbox of computational chemistry: A new approximation of critical f values for multiple linear regression
    • Kramer, C. et al. Sharpening the toolbox of computational chemistry: A new approximation of critical f values for multiple linear regression. J. Chem. Inf. Model. 49, 28-34 (2009
    • (2009) J. Chem. Inf. Model , vol.49 , pp. 28-34
    • Kramer, C.1
  • 52
    • 13444265939 scopus 로고    scopus 로고
    • Judging the significance of multiple linear regression models
    • Livingstone, D. J. & Salt, D. W. Judging the significance of multiple linear regression models. J. Med. Chem. 48, 661-663 (2005
    • (2005) J. Med. Chem , vol.48 , pp. 661-663
    • Livingstone, D.J.1    Salt, D.W.2
  • 54
    • 37349097759 scopus 로고    scopus 로고
    • Y randomization and its variants in qsprqsar
    • Rucker, C., Rucker, G. & Meringer, M. y Randomization and its variants in QSPR/QSAR. J. Chem. Inf. Model. 47, 2345-2357 (2007
    • (2007) J. Chem. Inf. Model , vol.47 , pp. 2345-2357
    • Rucker, C.1    Rucker, G.2    Meringer, M.3
  • 55
    • 56049095031 scopus 로고    scopus 로고
    • On the interpretation and interpretability of quantitative structure-activity relationship models
    • Guha, R. On the interpretation and interpretability of quantitative structure-activity relationship models. J. Computer-Aided Mol. Design 22, 857-871 (2008
    • (2008) J. Computer-Aided Mol. Design , vol.22 , pp. 857-871
    • Guha, R.1
  • 56
    • 79955967718 scopus 로고    scopus 로고
    • Trade-off between accuracy and interpretability for predictive in silico modeling
    • Johansson, U., Sonstrod, C., Norinder, U. & Bostrom, H. Trade-off between accuracy and interpretability for predictive in silico modeling. Future Med. Chem. 3, 647-663 (2011
    • (2011) Future Med. Chem , vol.3 , pp. 647-663
    • Johansson, U.1    Sonstrod, C.2    Norinder, U.3    Bostrom, H.4
  • 57
    • 72949101619 scopus 로고    scopus 로고
    • Interpretation of nonlinear QSAR models applied to Ames mutagenicity data
    • Carlsson, L., Helgee, E. A. & Boyer, S. Interpretation of nonlinear QSAR models applied to Ames mutagenicity data. J. Chem. Inf. Model. 49, 2551-2558 (2009
    • (2009) J. Chem. Inf. Model , vol.49 , pp. 2551-2558
    • Carlsson, L.1    Helgee, E.A.2    Boyer, S.3
  • 58
    • 0038579386 scopus 로고    scopus 로고
    • The signature molecular descriptor 1 using extended valence sequences in qsar and qspr studies
    • Faulon, J. L., Visco, D. P. Jr & Pophale, R. S. The signature molecular descriptor. 1. Using extended valence sequences in QSAR and QSPR studies. J. Chem. Inf. Comput. Sci. 43, 707-720 (2003
    • (2003) J. Chem. Inf. Comput. Sci , vol.43 , pp. 707-720
    • Faulon, J.L.1    Visco Jr., D.P.2    Pophale, R.S.3
  • 60
  • 61
    • 14944350238 scopus 로고    scopus 로고
    • A general method for exploiting QSAR models in lead optimization
    • Lewis, R. A. A general method for exploiting, QSAR models in lead optimization. J. Med. Chem. 48, 1638-1648 (2005
    • (2005) J. Med. Chem , vol.48 , pp. 1638-1648
    • Lewis, R.A.1
  • 62
    • 72949121094 scopus 로고    scopus 로고
    • Method for automated molecular optimization applied to ames mutagenicity data
    • Helgee, E. A., Carlsson, L. & Boyer, S. A. Method for automated molecular optimization applied to Ames mutagenicity data. J. Chem. Inform. Model. 49, 2559-2563 (2009
    • (2009) J. Chem. Inform. Model , vol.49 , pp. 2559-2563
    • Helgee, E.A.1    Carlsson, L.2    Boyer, S.A.3
  • 63
    • 81555204763 scopus 로고    scopus 로고
    • Matched molecular pairs as a medicinal chemistry tool
    • Griffen, E., Leach, A. G., Robb, G. R. & Warner, D. J. Matched molecular pairs as a medicinal chemistry tool. J. Med. Chem. 54, 7739-7750 (2011
    • (2011) J. Med. Chem , vol.54 , pp. 7739-7750
    • Griffen, E.1    Leach, A.G.2    Robb, G.R.3    Warner, D.J.4
  • 64
  • 65
    • 77953386723 scopus 로고    scopus 로고
    • The rise of the intelligent machines in drug hunting?
    • Griffen, E. The rise of the intelligent machines in drug hunting? Future Med. Chem. 1, 405-408 (2009
    • (2009) Future Med. Chem , vol.1 , pp. 405-408
    • Griffen, E.1
  • 66
    • 84861033562 scopus 로고    scopus 로고
    • Prospective prediction of antitarget activity by matched molecular pairs analysis
    • Warner, D. J., Bridgland-Taylor, M. H., Sefton, C. E. & Wood, D. J. Prospective prediction of antitarget activity by matched molecular pairs analysis. Mol. Inform. 31, 365-368 (2012
    • (2012) Mol. Inform , vol.31 , pp. 365-368
    • Warner, D.J.1    Bridgland-Taylor, M.H.2    Sefton, C.E.3    Wood, D.J.4
  • 67
    • 39149090377 scopus 로고    scopus 로고
    • Statistical analysis of the effects of common chemical substituents on ligand potency
    • Hajduk, P. J. & Sauer, D. R. Statistical analysis of the effects of common chemical substituents on ligand potency. J. Med. Chem. 51, 553-564 (2008
    • (2008) J. Med. Chem , vol.51 , pp. 553-564
    • Hajduk, P.J.1    Sauer, D.R.2
  • 68
    • 84863155378 scopus 로고    scopus 로고
    • SAR mining and its application to the design of TRPA1 antagonists
    • Mills, J. E. J. et al. SAR mining and its application to the design of TRPA1 antagonists. Med. Chem. Commun. 3, 174-178 (2012
    • (2012) Med. Chem. Commun , vol.3 , pp. 174-178
    • Mills, J.E.J.1
  • 70
    • 34047134980 scopus 로고    scopus 로고
    • Development interpretation and temporal evaluation of a global QSAR of hERG electrophysiology screening data
    • Gavaghan, C., Arnby, C., Blomberg, N., Strandlund, G. & Boyer, S. Development, interpretation and temporal evaluation of a global QSAR of hERG electrophysiology screening data. J. Comput. Aided Mol. Des. 21, 189-206 (2007
    • (2007) J. Comput. Aided Mol. Des , vol.21 , pp. 189-206
    • Gavaghan, C.1    Arnby, C.2    Blomberg, N.3    Strandlund, G.4    Boyer, S.5
  • 71
    • 84857675495 scopus 로고    scopus 로고
    • In silico methods combined with expert knowledge rule out mutagenic potential of pharmaceutical impurities: An industry survey
    • Dobo, K. L. et al. In silico methods combined with expert knowledge rule out mutagenic potential of pharmaceutical impurities: An industry survey. Regul. Toxicol. Pharmacol. 62, 449-455 (2012
    • (2012) Regul. Toxicol. Pharmacol , vol.62 , pp. 449-455
    • Dobo, K.L.1
  • 72
    • 0038493775 scopus 로고    scopus 로고
    • QSAR and the rational design of long-acting dual D2 receptor/β2 adrenoceptor agonists
    • Austin, R. P. et al. QSAR and the rational design of long-acting dual D2 receptor/β2 adrenoceptor agonists. J. Med. Chem. 46, 3210-3220 (2003
    • (2003) J. Med. Chem , vol.46 , pp. 3210-3220
    • Austin, R.P.1
  • 73
    • 35148859736 scopus 로고    scopus 로고
    • The discovery of indole-derived long acting β2 adrenoceptor agonists for the treatment of asthma and COPD
    • Brown, A. D. et al. The discovery of indole-derived long acting β2 adrenoceptor agonists for the treatment of asthma and COPD. Bioorg. Med. Chem. Lett. 17, 6188-6191 (2007
    • (2007) Bioorg. Med. Chem. Lett , vol.17 , pp. 6188-6191
    • Brown, A.D.1
  • 74
    • 77952054496 scopus 로고    scopus 로고
    • The identification of indacaterol as an ultralong-acting inhaled β2 adrenoceptor agonist
    • Baur, F. et al. The identification of indacaterol as an ultralong-acting inhaled β2 adrenoceptor agonist. J. Med. Chem. 53, 3675-3684 (2010
    • (2010) J. Med. Chem , vol.53 , pp. 3675-3684
    • Baur, F.1
  • 75
    • 0035526164 scopus 로고    scopus 로고
    • Search for predictive generic model of aqueous solubility using bayesian neural nets
    • Bruneau, P. Search for predictive generic model of aqueous solubility using Bayesian neural nets. J. Chem. Inf. Comput. Sci. 41, 1605-1616 (2001
    • (2001) J. Chem. Inf. Comput. Sci , vol.41 , pp. 1605-1616
    • Bruneau, P.1
  • 76
    • 79959743870 scopus 로고    scopus 로고
    • To measure is to know: An approach to CADD performance metrics
    • Loughney, D., Claus, B. L. & Johnson, S. R. To measure is to know: An approach to CADD performance metrics. Drug Discov. Today 16, 548-554 (2011
    • (2011) Drug Discov. Today , vol.16 , pp. 548-554
    • Loughney, D.1    Claus, B.L.2    Johnson, S.R.3
  • 77
    • 84872038006 scopus 로고    scopus 로고
    • Inflation of correlation in the pursuit of drug-likeness
    • Kenny, P. W. & Montanari, C. A. Inflation of correlation in the pursuit of drug-likeness. J. Comput. Aided Mol. Des. 27, 1-13 (2013
    • (2013) J. Comput. Aided Mol. Des , vol.27 , pp. 1-13
    • Kenny, P.W.1    Montanari, C.A.2
  • 78
    • 71049126548 scopus 로고    scopus 로고
    • Escape from flatland: Increasing saturation as an approach to improving clinical success
    • Lovering, F., Bikker, J. & Humblet, C. Escape from flatland: Increasing saturation as an approach to improving clinical success. J. Med. Chem. 52, 6752-6756 (2009
    • (2009) J. Med. Chem , vol.52 , pp. 6752-6756
    • Lovering, F.1    Bikker, J.2    Humblet, C.3
  • 79
    • 84879866133 scopus 로고    scopus 로고
    • A critical assessment of modeling safety-related drug attrition
    • Muthas, D., Boyer, S. & Hasselgren, C. A critical assessment of modeling safety-related drug attrition Med. Chem. Commun. 4, 1058-1065 (2013
    • (2013) Med Chem. Commun , vol.4 , pp. 1058-1065
    • Muthas, D.1    Boyer, S.2    Hasselgren, C.3
  • 80
    • 80052831391 scopus 로고    scopus 로고
    • Drug discovery in the next decade: Innovation needed ASAP
    • Bennani, Y. L. Drug discovery in the next decade: Innovation needed ASAP. Drug Discov. Today 16, 779-792 (2011
    • (2011) Drug Discov. Today , vol.16 , pp. 779-792
    • Bennani, Y.L.1
  • 82
    • 34548841427 scopus 로고    scopus 로고
    • From ATP to AZD6140: The discovery of an orally active reversible P2Y12 receptor antagonist for the prevention of thrombosis
    • Springthorpe, B. et al. From ATP to AZD6140: The discovery of an orally active reversible P2Y12 receptor antagonist for the prevention of thrombosis. Bioorg. Med. Chem. Lett. 17, 6013-6018 (2007
    • (2007) Bioorg. Med. Chem. Lett , vol.17 , pp. 6013-6018
    • Springthorpe, B.1
  • 83
    • 4544338170 scopus 로고    scopus 로고
    • Assessment of the consistency of medicinal chemists in reviewing sets of compounds
    • Lajiness, M. S., Maggiora, G. M. & Shanmugasundaram, V. Assessment of the consistency of medicinal chemists in reviewing sets of compounds. J. Med. Chem. 47, 4891-4896 (2004
    • (2004) J. Med. Chem , vol.47 , pp. 4891-4896
    • Lajiness, M.S.1    Maggiora, G.M.2    Shanmugasundaram, V.3
  • 84
    • 84869744217 scopus 로고    scopus 로고
    • Inside the mind of a medicinal chemist: The role of human bias in compound prioritization during drug discovery
    • Kutchukian, P. S. et al. Inside the mind of a medicinal chemist: The role of human bias in compound prioritization during drug discovery. PLoS ONE 7, e48476 (2012
    • (2012) PLoS ONE , vol.7
    • Kutchukian, P.S.1
  • 85
    • 67650308267 scopus 로고    scopus 로고
    • A crowdsourcing evaluation of the NIH chemical probes
    • Oprea, T. I. et al. A crowdsourcing evaluation of the NIH chemical probes. Nature Chem. Biol. 5, 441-447 (2009
    • (2009) Nature Chem. Biol , vol.5 , pp. 441-447
    • Oprea, T.I.1
  • 87
    • 80053004364 scopus 로고    scopus 로고
    • Structural alert/reactive metabolite concept as applied in medicinal chemistry to mitigate the risk of idiosyncratic drug toxicity: A perspective based on the critical examination of trends in the top 200 drugs marketed in the United States
    • Stepan, A. F. et al. Structural alert/reactive metabolite concept as applied in medicinal chemistry to mitigate the risk of idiosyncratic drug toxicity: A perspective based on the critical examination of trends in the top 200 drugs marketed in the United States. Chem. Res. Toxicol. 24, 1345-1410 (2011
    • (2011) Chem. Res. Toxicol , vol.24 , pp. 1345-1410
    • Stepan, A.F.1
  • 88
    • 33845984006 scopus 로고    scopus 로고
    • What works and what does not: Lessons from experience in a pharmaceutical company
    • Martin, Y. C. What works and what does not: Lessons from experience in a pharmaceutical company. QSAR Comb. Sci. 25, 1192-1200 (2006
    • (2006) QSAR Comb. Sci , vol.25 , pp. 1192-1200
    • Martin, Y.C.1
  • 89
    • 84867564789 scopus 로고    scopus 로고
    • Chemical descriptors are more important than learning algorithms for modelling
    • Young, S. S., Yuan, F. & Zhu, M. Chemical descriptors are more important than learning algorithms for modelling. Mol. Inform. 31, 707-710 (2012
    • (2012) Mol. Inform , vol.31 , pp. 707-710
    • Young, S.S.1    Yuan, F.2    Zhu, M.3
  • 90
    • 84860456763 scopus 로고    scopus 로고
    • Enantiomeric pairs reveal that key medicinal chemistry parameters vary more than simple physical property based models can explain
    • Leach, A. G. et al. Enantiomeric pairs reveal that key medicinal chemistry parameters vary more than simple physical property based models can explain. Med. Chem. Commun. 3, 528-540 (2012
    • (2012) Med. Chem. Commun , vol.3 , pp. 528-540
    • Leach, A.G.1
  • 91
    • 41549116955 scopus 로고    scopus 로고
    • Use of 3D QSAR models for database screening: A feasibility study
    • Hillebrecht, A. & Klebe, G. Use of 3D QSAR models for database screening: A feasibility study. J. Chem. Inf. Model. 48, 384-396 (2008
    • (2008) J. Chem. Inf. Model , vol.48 , pp. 384-396
    • Hillebrecht, A.1    Klebe, G.2
  • 93
    • 84857737608 scopus 로고    scopus 로고
    • Multi-parameter optimization: Identifying high quality compounds with a balance of properties
    • Segall, M. D. Multi-parameter optimization: Identifying high quality compounds with a balance of properties. Curr. Pharm. Des. 18, 1292-1310 (2012
    • (2012) Curr. Pharm. Des , vol.18 , pp. 1292-1310
    • Segall, M.D.1
  • 94
    • 23844449940 scopus 로고    scopus 로고
    • Computer-based de novo design of drug-like molecules
    • Schneider, G. & Fechner, U. Computer-based de novo design of drug-like molecules. Nature Rev. Drug Discov. 4, 649-663 (2005
    • (2005) Nature Rev. Drug Discov , vol.4 , pp. 649-663
    • Schneider, G.1    Fechner, U.2
  • 95
    • 77954787493 scopus 로고    scopus 로고
    • De novo design: Balancing novelty and confined chemical space
    • Kutchukian, P. S. & Shakhnovich, E. I. De novo design: Balancing novelty and confined chemical space. Expert Opin. Drug Discov. 5, 789-812 (2010
    • (2010) Expert Opin. Drug Discov , vol.5 , pp. 789-812
    • Kutchukian, P.S.1    Shakhnovich, E.I.2
  • 96
    • 82355182398 scopus 로고    scopus 로고
    • Applying medicinal chemistry transformations and multiparameter optimization to guide the search for high-quality leads and candidates
    • Segall, M. et al. Applying medicinal chemistry transformations and multiparameter optimization to guide the search for high-quality leads and candidates. J. Chem. Inf. Model. 51, 2967-2976 (2011
    • (2011) J. Chem. Inf. Model , vol.51 , pp. 2967-2976
    • Segall, M.1
  • 97
    • 84870987376 scopus 로고    scopus 로고
    • Automated design of ligands to polypharmacological profiles
    • Besnard, J. et al. Automated design of ligands to polypharmacological profiles. Nature 492, 215-220 (2012
    • (2012) Nature , vol.492 , pp. 215-220
    • Besnard, J.1
  • 98
    • 84889590535 scopus 로고    scopus 로고
    • Why is it still drug discovery?
    • online
    • Segall, M. Why is it still drug discovery? BioFocus [online], http://www.biofocus.com/-downloads/ publications/2008/why-is-it-still-drug- discovery.pdf (2008
    • (2008) Bio Focus
    • Segall, M.1
  • 99
    • 79955613841 scopus 로고    scopus 로고
    • Molecular obesity, potency and other addictions in drug discovery
    • Hann, M. M. Molecular obesity, potency and other addictions in drug discovery. Med. Chem. Commun. 2, 349-355 (2011
    • (2011) Med. Chem. Commun , vol.2 , pp. 349-355
    • Hann, M.M.1
  • 100
    • 0022400101 scopus 로고
    • Fundamental structural alerts to potential carcinogenicity or noncarcinogenicity
    • Ashby, J. Fundamental structural alerts to potential carcinogenicity or noncarcinogenicity. Environ. Mutagen. 7, 919-921 (1985
    • (1985) Environ. Mutagen , vol.7 , pp. 919-921
    • Ashby, J.1
  • 101
    • 0036179239 scopus 로고    scopus 로고
    • Experimental and computational screening models for prediction of aqueous drug solubility
    • Bergstrom, C. A., Norinder, U., Luthman, K. & Artursson, P. Experimental and computational screening models for prediction of aqueous drug solubility. Pharm. Res. 19, 182-188 (2002
    • (2002) Pharm. Res , vol.19 , pp. 182-188
    • Bergstrom, C.A.1    Norinder, U.2    Luthman, K.3    Artursson, P.4
  • 102
    • 0037361967 scopus 로고    scopus 로고
    • The Chemistry Development Kit (CDK): An open-source java library for chemo- and bioinformatics
    • Steinbeck, C. et al. The Chemistry Development Kit (CDK): An open-source java library for chemo- and bioinformatics. J. Chem. Inf. Comput. Sci. 43, 493-500 (2003
    • (2003) J. Chem. Inf. Comput. Sci , vol.43 , pp. 493-500
    • Steinbeck, C.1
  • 103
    • 27344459398 scopus 로고    scopus 로고
    • Virtual computational chemistry laboratory - design and description
    • Tetko, I. V. et al. Virtual computational chemistry laboratory - design and description. J. Comput. Aided Mol. Des. 19, 453-463 (2005
    • (2005) J. Comput. Aided Mol. Des , vol.19 , pp. 453-463
    • Tetko, I.V.1
  • 105
    • 33750976700 scopus 로고    scopus 로고
    • Matched molecular pairs as a guide in the optimization of pharmaceutical properties; a study of aqueous solubility, plasma protein binding and oral exposure
    • Leach, A. G. et al. Matched molecular pairs as a guide in the optimization of pharmaceutical properties; a study of aqueous solubility, plasma protein binding and oral exposure. J. Med. Chem. 49, 6672-6682 (2006
    • (2006) J. Med. Chem , vol.49 , pp. 6672-6682
    • Leach, A.G.1
  • 106
    • 68149129503 scopus 로고    scopus 로고
    • ADMET rules of thumb II: A comparison of the effects of common substituents on a range of ADMET parameters
    • Gleeson, P., Bravi, G., Modi, S. & Lowe, D. ADMET rules of thumb II: A comparison of the effects of common substituents on a range of ADMET parameters. Bioorg. Med. Chem. 17, 5906-5919 (2009
    • (2009) Bioorg. Med. Chem , vol.17 , pp. 5906-5919
    • Gleeson, P.1    Bravi, G.2    Modi, S.3    Lowe, D.4
  • 107
    • 58149343803 scopus 로고    scopus 로고
    • Structural pairwise comparisons of HLM stability of phenyl derivatives: Introduction of the Pfizer metabolism index (PMI) and metabolism-lipophilicity efficiency (MLE
    • Lewis, M. L. & Cucurull-Sanchez, L. Structural pairwise comparisons of HLM stability of phenyl derivatives: Introduction of the Pfizer metabolism index (PMI) and metabolism-lipophilicity efficiency (MLE). J. Comput. Aided Mol. Des. 23, 97-103 (2009
    • (2009) J. Comput. Aided Mol. Des , vol.23 , pp. 97-103
    • Lewis, M.L.1    Cucurull-Sanchez, L.2
  • 108
    • 77953137063 scopus 로고    scopus 로고
    • A statistical analysis of in vitro human microsomal metabolic stability of small phenyl group substituents, leading to improved design sets for parallel sar exploration of a chemical series
    • Dossetter, A. G. A statistical analysis of in vitro human microsomal metabolic stability of small phenyl group substituents, leading to improved design sets for parallel SAR exploration of a chemical series. Bioorg. Med. Chem. 18, 4405-4414 (2010
    • (2010) Bioorg. Med. Chem , vol.18 , pp. 4405-4414
    • Dossetter, A.G.1
  • 109
    • 84865518339 scopus 로고    scopus 로고
    • A matched molecular pair analysis of in vitro human microsomal metabolic stability measurements for heterocyclic replacements of di substituted benzene containing compounds - identification of those isosteres more likely to have beneficial effects
    • Dossetter, A. G., Douglas, A. & O'Donnell, C. A matched molecular pair analysis of in vitro human microsomal metabolic stability measurements for heterocyclic replacements of di substituted benzene containing compounds - Identification of those isosteres more likely to have beneficial effects. Med. Chem. Commun. 3, 1164-1169 (2012
    • (2012) Med. Chem. Commun , vol.3 , pp. 1164-1169
    • Dossetter, A.G.1    Douglas, A.2    O'Donnell, C.3
  • 110
    • 84870018107 scopus 로고    scopus 로고
    • A matched molecular pair analysis of in vitro human microsomal metabolic stability measurements for methylene substitution or replacements - identification of those transforms more likely to have beneficial effects
    • Dossetter, A. G. A matched molecular pair analysis of in vitro human microsomal metabolic stability measurements for methylene substitution or replacements - Identification of those transforms more likely to have beneficial effects. Med. Chem. Commun. 3, 1518-1525 (2012
    • (2012) Med. Chem. Commun , vol.3 , pp. 1518-1525
    • Dossetter, A.G.1
  • 111
    • 77958518144 scopus 로고    scopus 로고
    • Lead optimization using matched molecular pairs: Inclusion of contextual information for enhanced prediction of hERG inhibition, solubility, and lipophilicity
    • Papadatos, G. et al. Lead optimization using matched molecular pairs: Inclusion of contextual information for enhanced prediction of hERG inhibition, solubility, and lipophilicity. J. Chem. Inform. Model. 50, 1872-1886 (2010
    • (2010) J. Chem. Inform. Model , vol.50 , pp. 1872-1886
    • Papadatos, G.1
  • 112
    • 79958283190 scopus 로고    scopus 로고
    • Extraction of tacit knowledge from large ADME data sets via pairwise analysis
    • Keefer, C. E., Chang, G. & Kauffman, G. W. Extraction of tacit knowledge from large ADME data sets via pairwise analysis. Bioorg. Med. Chem. 19, 3739-3749 (2011
    • (2011) Bioorg. Med. Chem , vol.19 , pp. 3739-3749
    • Keefer, C.E.1    Chang, G.2    Kauffman, G.W.3
  • 113
    • 77956016083 scopus 로고    scopus 로고
    • WizePairZ: A novel algorithm to identify, encode, and exploit matched molecular pairs with unspecified cores in medicinal chemistry
    • Warner, D. J., Griffen, E. J. & St Gallay, S. WizePairZ: A novel algorithm to identify, encode, and exploit matched molecular pairs with unspecified cores in medicinal chemistry. J. Chem. Inform. Model. 50, 1350-1357 (2010
    • (2010) J. Chem. Inform. Model , vol.50 , pp. 1350-1357
    • Warner, D.J.1    Griffen, E.J.2    St Gallay, S.3


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