Response surface methodology to design a selective enrichment broth for rapid detection of Salmonella spp. by SYBR Green I real-time PCR

Applied Microbiology and Biotechnology

Volumn 97, Issue 9, 2013, Pages 4149-4158

  Zhang, Qiaoyan ^a   Chen, Tingting ^b   Yang, Shengli ^b   Wang, Xiaofu ^a   Guo, Hui ^b  

^a INSTITUTE OF PLANT PROTECTION AND MICROBIOLOGY   (China)

^b ZHEJIANG UNIVERSITY OF TECHNOLOGY   (China)

Author keywords

Acarbose; Inhibitor; Response surface methodology; Salmonella spp.; Selective enrichment broth; SYBR green I real time PCR

Indexed keywords

CHLORINE COMPOUNDS; LITHIUM COMPOUNDS; SALMONELLA; SURFACE PROPERTIES;

ACARBOSE; INHIBITOR; REAL-TIME PCR; RESPONSE SURFACE METHODOLOGY; SALMONELLA SPP; SELECTIVE ENRICHMENT;

POLYMERASE CHAIN REACTION;

DYE; SYBR GREEN I; UNCLASSIFIED DRUG;

BACTERIUM; EXPERIMENTAL DESIGN; INHIBITOR; POLYMERASE CHAIN REACTION; REAL TIME;

ARTICLE; BACTERIAL GROWTH; CITROBACTER FREUNDII; COMPUTER SIMULATION; NONHUMAN; REAL TIME POLYMERASE CHAIN REACTION; RESPONSE SURFACE METHOD; SALMONELLA; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR ENTERITIDIS; SHIGELLA FLEXNERI; GENETICS; GROWTH, DEVELOPMENT AND AGING; METHODOLOGY;

SALMONELLA;

COMPUTER SIMULATION; REAL-TIME POLYMERASE CHAIN REACTION; SALMONELLA;

EID: 84885919784     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-013-4780-6     Document Type: Article

References (40)

1. Aouadhi C, Simonin H, Prévost H, de Lamballerie M, Maaroufi A, Mejri S (2012) Optimization of pressure-induced germination of Bacillus sporothermodurans spores in water and milk. Food Microbiol 30:1-7. doi:10.1016/j.fm.2011.12.006
2. Arroyo-López FN, Pérez-Torrado R, Querol A, Barrio E (2010) Modulation of the glycerol and ethanol syntheses in the yeast Saccharomyces kudriavzevii differs from that exhibited by Saccharomyces cerevisiae and their hybrid. Food Microbiol 27:628-637. doi:10.1016/j.fm.2010.02.001
3. Busse M (1995) Media for salmonella. Int J Food Microbiol 26:117-131. doi:10.1016/0168-1605(93)E0030-U
4. Chen H, Frase ADE, Yamazaki H (1994) Modes of inhibition of foodborne non-Salmonella bacteria by selenite cystine selective broth. Int J Food Microbiol 22:217-222. doi:10.1016/0168-1605 (94)90144-9
5. Collazo CM, Galán JE (1997) The invasion-associated type-III protein secretion system in Salmonella - a review. Gene 192:51-59. doi:10.1016/S0378-1119(96)00825-6
6. Elizaquível P, Aznar R (2008) A multiplex RTi-PCR reaction for simultaneous detection of Escherichia coli O157:H7, Salmonella spp. and Staphylococcus aureus on fresh, minimally processed vegetables. Food Microbiol 25:705-713. doi:10.1016/j.fm.2008.03.002
7. Gao YL, Ju XR (2008) Exploiting the combined effects of high pressure and moderate heat with nisin on inactivation of Clostridium botulinum spores. J Microbiol Meth 72:20-28. doi:10.1016/j.mimet.2007.11.003
8. Hein I, Flekna G, Krassnig M, Wagner M (2006) Real-time PCR for the detection of Salmonella spp. in food: an alternative approach to a conventional PCR system suggested by the FOOD-PCR project. J Microbiol Meth 66:538-547. doi:10.1016/j.mimet.2006.02.008
9. Jasson V, Baert L, Uyttendaele M (2011) Detection of low numbers of healthy and sub-lethally injured Salmonella enterica in chocolate. Int J Food Microbiol 145:488-491. doi:10.1016/j.ijfoodmicro.2011.01.031
10. Jofré A, Martin B, Garriga M, Hugas M, Pla M, Rodríguez-Lázaro D, Aymerich T (2005) Simultaneous detection of Listeria monocytogenes and Salmonella by multiplex PCR in cooked ham. Food Microbiol 22:109-115. doi:10.1016/j.fm.2004.04.009
11. Kim H, Bhunia AK (2008) SEL, a selective enrichment broth for simultaneous growth of Salmonella enterica, Escherichia coli O157:H7, and Listeria monocytogenes. Appl Environ Microb 74:4853-4866. doi:10.1128/AEM.02756-07
12. Li Y, Zhuang S, Mustapha A (2005) Application of a multiplex PCR for the simultaneous detection of Escherichia coli O157:H7, Salmonella and Shigella in raw and ready-to-eat meat products. Meat Sci 71:402-406. doi:10.1016/j.meatsci.2005.04.013
13. Malorny B, Hoorfar J, Bunge C, Helmuth R (2003) Multicenter validation of the analytical accuracy of Salmonella PCR: towards an international standard. Appl Environ Microb 69:290-296. doi:10.1128/AEM.69.1.290-296.2003
14. Malorny B, Löfström C, Wagner M, Krämer N, Hoorfar J (2008) Enumeration of Salmonella bacteria in food and feed samples by real-time PCR for quantitative microbial risk assessment. Appl Environ Microb 74:1299-1304. doi:10.1128/AEM.02489-07
15. Malorny B, Mäde D, Teufel P, Berghof-Jäger C, Huber I, Anderson A, Helmuth R (2007) Multicenter validation study of two block cycler- and one capillary-based real-time PCR methods for the detection of Salmonella in milk powder. Int J Food Microbiol 117:211-218. doi:10.1016/j.ijfoodmicro.2007.04.004
16. Mazumdar SD, Hartmann M, Kämpfer P, Keusgen M (2007) Rapid method for detection of Salmonella in milk by surface plasmon resonance (SPR). Biosens Bioelectron 22:2040-2046. doi:10.1016/j.bios.2006.09.004
17. Miller ND, Davidson PM, D'Souza DH (2011) Real-time reverse-transcriptase PCR for Salmonella Typhimurium detection from lettuce and tomatoes. LWT - Food Sci Technol 44:1088-1097. doi:10.1016/j.lwt.2010.08.003
18. Montgomery DC (2001) Response surfacemethods and other approaches to process optimization. In: Montgomery DC (ed) Design and analysis of experiments, 5th edn. Wiley, New York, pp 427-510
19. Moyo S, Gashe BA, Collison EK, Mpuchane S (2003) Optimising growth conditions for the pectinolytic activity of Kluyveromyces wickerhamii by using response surface methodology. Int J Food Microbiol 85:87-100. doi:10.1016/S0168-1605(02)00503-2
20. Murphy BP, Buckley JF, O'Connor EM, Gilroy D, Fanning S (2008) Comparison of Salmonella species recovered from Irish liquid milk production holdings with temporal clinical veterinary isolates. Int J Hyg Environ Heal 211:283-291. doi:10.1016/j.ijheh.2007.05.008
21. Nam HM, Srinivasan V, Gillespie BE, Murinda SE, Oliver SP (2005) Application of SYBR green real-time PCR assay for specific detection of Salmonella spp. in dairy farm environmental samples. Int J Food Microbiol 102:161-171. doi:10.1016/j.ijfoodmicro.2004.12.020
22. O'Mahony J, Hill C (2002) A real time PCR assay for the detection and quantitation of Mycobacterium avium subsp. paratuberculosis using SYBR Green and the Light Cycler. J Microbiol Meth 51:283-293. doi:10.1016/S0167-7012(02)00098-2
23. Panesar PS, Chavan Y, Chopra HK, Kennedy JF (2012) Production of microbial cellulose: response surface methodology approach. Carbohyd Polym 87:930-934. doi:10.1016/j.carbpol.2011.08.002
24. Pau CP, Wells SK, Rudolph DL, Owen SM, Granade TC (2010) A rapid real-time PCR assay for the detection of HIV-1 proviral DNA using double-stranded primer. J Virol Methods 164:55-62. doi:10.1016/j.jviromet.2009.11.027
25. Rahn K, De Grandis SA, Clarke RC, McEwen SA, Galán JE, Ginocchio C, Curtiss R III, Gyles CL (1992) Amplification of an invA gene sequence of Salmonella typhimurium by polymerase chain reaction as a specific method of detection of Salmonella. Mol Cell Probe 6:271-279. doi:10.1016/0890-8508(92)90002-F
26. Ramanan RN, Tan JS, Mohamed MS, Ling TC, Tey BT, Ariff AB (2010) Optimization of osmotic shock process variables for enhancement of the release of periplasmic interferon-α2b from Escherichia coli using response surface method. Process Biochem 45:196-202. doi:10.1016/j.procbio.2009.09.007
27. Riyaz-Ul-Hassan S, Verma V, Qazi GN (2004) Rapid detection of Salmonella by polymerase chain reaction. Mol Cell Probe 18:333-339. doi:10.1016/j.mcp.2004.05.003
28. Scallan E, Hoekstra RM, Angulo FJ, Tauxe RV, Widdowson MA, Roy SL, Jones JL, Griffin PM (2011) Foodborne illness acquired in the United States-major pathogens. Emerg Infect Dis 17:7-15. doi:10.3201/eid1701.P11101
29. Simate GS, Ndlovu S, Gericke M (2009) Bacterial leaching of nickel laterites using chemolithotrophic microorganisms: process optimisation using response surface methodology and central composite rotatable design. Hydrometallurgy 98:241-246. doi:10.1016/j.hydromet.2009.05.007
30. Sun F, Wu D, Qiu Z, Jin M, Wang X, Li J (2010) Development of realtime PCR systems based on SYBR Green for the specific detection and quantification of Klebsiella pneumoniae in infant formula. Food Control 21:487-491. doi:10.1016/j.foodcont.2009.07.014
31. Tadesse G, Ashenafi M, Ephraim E (2005) Survival of E. coli O157: H7, Staphylococcus aureus, Shigella flexneri and Salmonella spp. in fermenting 'Borde', a traditional Ethiopian beverage. Food Control 16:189-196. doi:10.1016/j.foodcont.2004.01.011
32. Taskila S, Tuomola M, Ojamo H (2012) Enrichment cultivation in detection of food-borne Salmonella. Food Control 26:369-377. doi:10.1016/j.foodcont.2012.01.043
33. Töwe S, Kleineidam K, Schloter M (2010) Differences in amplification efficiency of standard curves in quantitative real-time PCR assays and consequences for gene quantification in environmental samples. J Microbiol Meth 82:338-341. doi:10.1016/j.mimet.2010.07.005
34. Tsapatsaris S, Kotzekidou P (2004) Application of central composite design and response surface methodology to the fermentation of olive juice by Lactobacillus plantarum and Debaryomyces hansenii . Int J Food Microbiol 95:157-168. doi:10.1016/j.ijfoodmicro.2004.02.011
35. Wang YJ, Liu LL, Wang YS, Xue YP, Zheng YG, Shen YC (2012) Actinoplanes utahensis ZJB-08196 fed-batch fermentation at elevated osmolality for enhancing acarbose production. Bioresource Technol 103:337-342. doi:10.1016/j.biortech.2011.09.121
36. Weber C, Stephan R, Druggan P, Joosten H, Iversen C (2009) Improving the enrichment procedure for Enterobacteriaceae detection. Food Microbiol 26:565-572. doi:10.1016/j.fm.2009.03.010
37. Wehrle E, Didier A, Moravek M, Dietrich R, Märtlbauer E (2010) Detection of Bacillus cereus with enteropathogenic potential by multiplex real-time PCR based on SYBR green I. Mol Cell Probe 24:124-130. doi:10.1016/j.mcp.2009.11.004
38. Wittwer CT, Herrmann MG, Gundry CN, Elenitoba-Johnson KSJ (2001) Real-time multiplex PCR assays. Methods 25:430-442. doi:10.1006/meth.2001.1265
39. Yi S, Su Y, Qi B, Su Z, Wan Y (2010) Application of response surface methodology and central composite rotatable design in optimizing the preparation conditions of vinyltriethoxysilane modified silicalite/polydimethylsiloxane hybrid pervaporation membranes. Sep Purif Technol 71:252-262. doi:10.1016/j.seppur.2009.12.005
40. Zhang QY, Zhou WW, Zhou Y, Wang XF, Xu JF (2012) Response surface methodology to design a selective co-enrichment broth of Escherichia coli, Salmonella spp. and Staphylococcus aureus for simultaneous detection by multiplex PCR. Microbiol Res 167:405-412. doi:10.1016/j.micres.2012.02.003