-
3
-
-
0030445778
-
Tripping the switch fantastic: How a protein kinase cascade can convert graded inputs into switch-like outputs
-
DOI 10.1016/S0968-0004(96)20026-X, PII S096800049620026X
-
Ferrell J E 1996 Tripping the switch fantastic: how a protein kinase cascade can convert graded inputs into switch-like outputs Trends Biochem. Sci. 21 460-6 (Pubitemid 27018812)
-
(1996)
Trends in Biochemical Sciences
, vol.21
, Issue.12
, pp. 460-466
-
-
Ferrell Jr., J.E.1
-
4
-
-
0034019315
-
Negative feedback and ultrasensitivity can bring about oscillations in the mitogen-activated protein kinase cascades
-
DOI 10.1046/j.1432-1327.2000.01197.x
-
Kholodenko B N 2000 Negative feedback and ultrasensitivity can bring about oscillations in the mitogen-activated protein kinase cascades Eur. J. Biochem. 267 1583-8 (Pubitemid 30165509)
-
(2000)
European Journal of Biochemistry
, vol.267
, Issue.6
, pp. 1583-1588
-
-
Kholodenko, B.N.1
-
5
-
-
32044463378
-
Kinetic models of phosphorylation cycles: A systematic approach using the rapid-equilibrium approximation for protein-protein interactions
-
DOI 10.1016/j.biosystems.2005.05.015, PII S0303264705001280
-
Salazar C and Hfer T 2006 Kinetic models of phosphorylation cycles: a systematic approach using the rapid-equilibrium approximation for protein-protein interactions Biosystems 83 195-206 (Pubitemid 43199820)
-
(2006)
BioSystems
, vol.83
, Issue.2-3 SPEC. ISS.
, pp. 195-206
-
-
Salazar, C.1
Hofer, T.2
-
6
-
-
30344466977
-
The processivity of multiubiquitination by the APC determines the order of substrate degradation
-
DOI 10.1016/j.cell.2005.10.032, PII S0092867405012328
-
Rape M, Reddy S K and Kirschner M W 2006 The processivity of multiubiquitination by the APC determines the order of substrate degradation Cell 124 89-103 (Pubitemid 43069312)
-
(2006)
Cell
, vol.124
, Issue.1
, pp. 89-103
-
-
Rape, M.1
Reddy, S.K.2
Kirschner, M.W.3
-
7
-
-
34047240610
-
Modeling networks of coupled enzymatic reactions using the total quasi-steady state approximation
-
DOI 10.1371/journal.pcbi.0030045
-
Ciliberto A, Capuani F and Tyson J J 2007 Modeling networks of coupled enzymatic reactions using the total quasi-steady state approximation PLoS Comput. Biol. 3 e45 (Pubitemid 46535738)
-
(2007)
PLoS Computational Biology
, vol.3
, Issue.3
, pp. 0463-0472
-
-
Ciliberto, A.1
Capuani, F.2
Tyson, J.J.3
-
8
-
-
33947304756
-
Substrate Competition as a Source of Ultrasensitivity in the Inactivation of Wee1
-
DOI 10.1016/j.cell.2007.01.039, PII S0092867407002024
-
Kim S Y and Ferrell J E Jr 2007 Substrate competition as a source of ultrasensitivity in the inactivation of Wee1 Cell 128 1133-45 (Pubitemid 46437260)
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1133-1145
-
-
Kim, S.Y.1
Ferrell Jr., J.E.2
-
9
-
-
39149113411
-
Modular cell biology: Retroactivity and insulation
-
DOI 10.1038/msb4100204, PII MSB4100204
-
Del Vecchio D, Ninfa A J and Sontag E D 2008 Modular cell biology: retroactivity and insulation Mol. Syst. Biol. 4 161 (Pubitemid 351253202)
-
(2008)
Molecular Systems Biology
, vol.4
, pp. 161
-
-
Del Vecchio, D.1
Ninfa, A.J.2
Sontag, E.D.3
-
10
-
-
77649190430
-
MAPK substrate competition integrates patterning signals in the drosophila embryo
-
10.1016/j.cub.2010.01.019 0960-9822
-
Kim Y, Coppey M, Grossman R, Ajuria L, Jiménez G, Paroush Z and Shvartsman S Y 2010 MAPK substrate competition integrates patterning signals in the drosophila embryo Curr. Biol. 20 446-51
-
(2010)
Curr. Biol.
, vol.20
, Issue.5
, pp. 446-451
-
-
Kim, Y.1
Coppey, M.2
Grossman, R.3
Ajuria, L.4
Jiménez, G.5
Paroush, Z.6
Shvartsman, S.Y.7
-
11
-
-
79959652892
-
The coupling of pathways and processes through shared components
-
10.1186/1752-0509-5-103 1752-0509
-
Seaton D D and Krishnan J 2011 The coupling of pathways and processes through shared components BMC Syst. Biol. 5 103
-
(2011)
BMC Syst. Biol.
, vol.5
, Issue.1
, pp. 103
-
-
Seaton, D.D.1
Krishnan, J.2
-
12
-
-
33746363486
-
Domains, motifs, and scaffolds: The role of modular interactions in the evolution and wiring of cell signaling circuits
-
DOI 10.1146/annurev.biochem.75.103004.142710
-
Bhattacharyya R P, Reményi A, Yeh B J and Lim W A 2006 Domains, motifs, and scaffolds: the role of modular interactions in the evolution and wiring of cell signaling circuits Annu. Rev. Biochem. 75 655-80 (Pubitemid 44118047)
-
(2006)
Annual Review of Biochemistry
, vol.75
, pp. 655-680
-
-
Bhattacharyya, R.P.1
Remenyi, A.2
Yeh, B.J.3
Lim, W.A.4
-
13
-
-
36849043083
-
Substrate and docking interactions in serine/threonine protein kinases
-
DOI 10.1021/cr068221w
-
Goldsmith E J, Akella R, Min X, Zhou T and Humphreys J M 2007 Substrate and docking interactions in serine/threonine protein kinases Chem. Rev. 107 5065-81 (Pubitemid 350225869)
-
(2007)
Chemical Reviews
, vol.107
, Issue.11
, pp. 5065-5081
-
-
Goldsmith, E.J.1
Akella, R.2
Min, X.3
Zhou, T.4
Humphreys, J.M.5
-
14
-
-
84861859600
-
The structural basis for control of eukaryotic protein kinases
-
10.1146/annurev-biochem-052410-090317 0066-4154
-
Endicott J A, Noble M E M and Johnson L N 2012 The structural basis for control of eukaryotic protein kinases Annu. Rev. Biochem. 81 1-27
-
(2012)
Annu. Rev. Biochem.
, vol.81
, Issue.1
, pp. 587-627
-
-
Endicott, J.A.1
Noble, M.E.M.2
Johnson, L.N.3
-
15
-
-
47649125643
-
Allosteric regulation and catalysis emerge via a common route
-
DOI 10.1038/nchembio.98, PII NCHEMBIO98
-
Goodey N M and Benkovic S J 2008 Allosteric regulation and catalysis emerge via a common route Nature Chem. Biol. 4 474-82 (Pubitemid 352019763)
-
(2008)
Nature Chemical Biology
, vol.4
, Issue.8
, pp. 474-482
-
-
Goodey, N.M.1
Benkovic, S.J.2
-
17
-
-
83555176323
-
Allosteric regulation of PKCθ: Understanding multistep phosphorylation and priming by ligands in AGC kinases
-
10.1002/prot.23205 0887-3585
-
Seco J, Ferrer-Costa C, Campanera J M, Soliva R and Barril X 2012 Allosteric regulation of PKCθ: understanding multistep phosphorylation and priming by ligands in AGC kinases Proteins 80 269-80
-
(2012)
Proteins
, vol.80
, Issue.1
, pp. 269-280
-
-
Seco, J.1
Ferrer-Costa, C.2
Campanera, J.M.3
Soliva, R.4
Barril, X.5
-
18
-
-
64549122329
-
Computational studies of protein regulation by post-translational phosphorylation
-
10.1016/j.sbi.2009.02.007 0959-440X
-
Narayanan A and Jacobson M P 2009 Computational studies of protein regulation by post-translational phosphorylation Curr. Opin. Struct. Biol. 19 156-63
-
(2009)
Curr. Opin. Struct. Biol.
, vol.19
, Issue.2
, pp. 156-163
-
-
Narayanan, A.1
Jacobson, M.P.2
-
19
-
-
63749127483
-
Kinome signaling through regulated protein-protein interactions in normal and cancer cells
-
10.1016/j.ceb.2009.02.005 0955-0674
-
Pawson T and Kofler M 2009 Kinome signaling through regulated protein-protein interactions in normal and cancer cells Curr. Opin. Cell. Biol. 21 147-53
-
(2009)
Curr. Opin. Cell. Biol.
, vol.21
, Issue.2
, pp. 147-153
-
-
Pawson, T.1
Kofler, M.2
-
20
-
-
80053132089
-
Deciphering arginine methylation: Tudor tells the tale
-
10.1038/nrm3185 1471-0072
-
Chen C, Nott T J, Jin J and Pawson T 2011 Deciphering arginine methylation: Tudor tells the tale Nature Rev. Mol. Cell Biol. 12 629-42
-
(2011)
Nature Rev. Mol. Cell Biol.
, vol.12
, Issue.10
, pp. 629-642
-
-
Chen, C.1
Nott, T.J.2
Jin, J.3
Pawson, T.4
-
21
-
-
79151471921
-
Kinetic mechanisms of Ca2+/calmodulin dependent protein kinases
-
10.1016/j.abb.2010.11.008 0003-9861
-
Huynh Q K and Pagratis N 2011 Kinetic mechanisms of Ca2+/calmodulin dependent protein kinases Arch. Biochem. Biophys. 506 130-6
-
(2011)
Arch. Biochem. Biophys.
, vol.506
, Issue.2
, pp. 130-136
-
-
Huynh, Q.K.1
Pagratis, N.2
-
22
-
-
18444389741
-
Examination of the kinetic mechanism of mitogen-activated protein kinase activated protein kinase-2
-
DOI 10.1016/S0167-4838(02)00340-0, PII S0167483802003400
-
Schindler J F et al 2002 Examination of the kinetic mechanism of mitogen-activated protein kinase activated protein kinase-2 Biochim. Biophys. Acta 1598 88-97 (Pubitemid 41128026)
-
(2002)
Biochimica et Biophysica Acta - Proteins and Proteomics
, vol.1598
, Issue.1-2
, pp. 88-97
-
-
Schindler, J.F.1
Godbey, A.2
Hood, W.F.3
Bolten, S.L.4
Broadus, R.M.5
Kasten, T.P.6
Cassely, A.J.7
Hirsch, J.L.8
Merwood, M.A.9
Nagy, M.A.10
Fok, K.F.11
Saabye, M.J.12
Morgan, H.M.13
Compton, R.P.14
Mourey, R.J.15
Wittwer, A.J.16
Monahan, J.B.17
-
23
-
-
33744910065
-
Protein kinase D directly phosphorylates histone deacetylase 5 via a random sequential kinetic mechanism
-
DOI 10.1016/j.abb.2006.02.014, PII S0003986106000671
-
Huynh Q K and McKinsey T A 2006 Protein kinase D directly phosphorylates histone deacetylase 5 via a random sequential kinetic mechanism Arch. Biochem. Biophys. 450 141-8 (Pubitemid 43849620)
-
(2006)
Archives of Biochemistry and Biophysics
, vol.450
, Issue.2
, pp. 141-148
-
-
Huynh, Q.K.1
McKinsey, T.A.2
-
24
-
-
64549137956
-
Activation loop phosphorylation modulates brutons tyrosine kinase (Btk) kinase domain activity
-
10.1021/bi8019756 0006-2960
-
Lin L, Czerwinski R, Kelleher K, Siegel M M, Wu P, Kriz R, Aulabaugh A and Stahl M 2009 Activation loop phosphorylation modulates brutons tyrosine kinase (Btk) kinase domain activity Biochemistry 48 2021-32
-
(2009)
Biochemistry
, vol.48
, Issue.9
, pp. 2021-2032
-
-
Lin, L.1
Czerwinski, R.2
Kelleher, K.3
Siegel, M.M.4
Wu, P.5
Kriz, R.6
Aulabaugh, A.7
Stahl, M.8
-
25
-
-
77950482089
-
Global consequences of activation loop phosphorylation on protein kinase a
-
10.1074/jbc.M109.061820 0021-9258
-
Steichen J M, Iyer G H, Li S, Saldanha S A, Deal M S, Woods V L Jr and Taylor S S 2010 Global consequences of activation loop phosphorylation on protein kinase a J. Biol. Chem. 285 3825-32
-
(2010)
J. Biol. Chem.
, vol.285
, Issue.6
, pp. 3825-3832
-
-
Steichen, J.M.1
Iyer, G.H.2
Li, S.3
Saldanha, S.A.4
Deal Jr., M.S.5
Taylor, S.S.6
-
26
-
-
84859744067
-
Enzyme kinetics and interaction studies for human JNK1β1 and substrates activating transcription factor 2 (ATF2) and c-Jun N-terminal kinase (c-Jun)
-
10.1074/jbc.M111.323766 0021-9258
-
Figuera-Losada M and LoGrasso P V 2012 Enzyme kinetics and interaction studies for human JNK1β1 and substrates activating transcription factor 2 (ATF2) and c-Jun N-terminal kinase (c-Jun) J. Biol. Chem. 287 13291-302
-
(2012)
J. Biol. Chem.
, vol.287
, Issue.16
, pp. 13291-13302
-
-
Figuera-Losada, M.1
Lograsso, P.V.2
-
28
-
-
79551594605
-
Protein kinases: Evolution of dynamic regulatory proteins
-
10.1016/j.tibs.2010.09.006 0968-0004
-
Taylor S S and Kornev A P 2011 Protein kinases: evolution of dynamic regulatory proteins Trends Biochem. Sci. 36 65-77
-
(2011)
Trends Biochem. Sci.
, vol.36
, Issue.2
, pp. 65-77
-
-
Taylor, S.S.1
Kornev, A.P.2
-
29
-
-
0034383949
-
The regulation of protein function by multisite phosphorylation - A 25 year update
-
10.1016/S0968-0004(00)01712-6 0968-0004
-
Cohen P 2000 The regulation of protein function by multisite phosphorylation - a 25 year update Trends Biochem. Sci. 25 596-601
-
(2000)
Trends Biochem. Sci.
, vol.25
, Issue.12
, pp. 596-601
-
-
Cohen, P.1
-
30
-
-
2342477917
-
The novel functions of ubiquitination in signaling
-
DOI 10.1016/j.ceb.2004.02.005, PII S0955067404000146
-
Sun L and Chen Z J 2004 The novel functions of ubiquitination in signaling Curr. Opin. Cell Biol. 16 119-26 (Pubitemid 38757287)
-
(2004)
Current Opinion in Cell Biology
, vol.16
, Issue.2
, pp. 119-126
-
-
Sun, L.1
Chen, Z.J.2
-
32
-
-
67650360968
-
Unlimited multistability in multisite phosphorylation systems
-
10.1038/nature08102 0028-0836
-
Thomson M and Gunawardena J 2009 Unlimited multistability in multisite phosphorylation systems Nature 460 274-7
-
(2009)
Nature
, vol.460
, Issue.7252
, pp. 274-277
-
-
Thomson, M.1
Gunawardena, J.2
-
33
-
-
78650788495
-
Multisite phosphorylation provides an effective and flexible mechanism for switch-like protein degradation
-
10.1371/journal.pone.0014029 1932-6203
-
Varedi K S M, Ventura A C, Merajver S D and Lin X N 2010 Multisite phosphorylation provides an effective and flexible mechanism for switch-like protein degradation PLoS One 5 e14029
-
(2010)
PLoS One
, vol.5
, Issue.12
-
-
Varedi, K.S.M.1
Ventura, A.C.2
Merajver, S.D.3
Lin, X.N.4
-
34
-
-
78049274795
-
Timing control in regulatory networks by multisite protein modifications
-
10.1016/j.tcb.2010.08.012 0962-8924
-
Salazar C, Brümmer A, Alberghina L and Höfer T 2010 Timing control in regulatory networks by multisite protein modifications Trends Cell Biol. 20 634-41
-
(2010)
Trends Cell Biol.
, vol.20
, Issue.11
, pp. 634-641
-
-
Salazar, C.1
Brümmer, A.2
Alberghina, L.3
Höfer, T.4
-
35
-
-
79960137914
-
Scaffold-mediated nucleation of protein signaling complexes: Elementary principles
-
10.1016/j.mbs.2011.06.003 0025-5564
-
Yang J and Hlavacek W S 2011 Scaffold-mediated nucleation of protein signaling complexes: elementary principles Math. Biosci. 232 164-73
-
(2011)
Math. Biosci.
, vol.232
, Issue.2
, pp. 164-173
-
-
Yang, J.1
Hlavacek, W.S.2
-
38
-
-
73149111973
-
Quantitative effect of scaffold abundance on signal propagation
-
10.1038/msb.2009.73 1744-4292
-
Chapman S A and Asthagiri A R 2009 Quantitative effect of scaffold abundance on signal propagation Mol. Syst. Biol. 5 313
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 313
-
-
Chapman, S.A.1
Asthagiri, A.R.2
-
39
-
-
77955353912
-
Signal response sensitivity in the yeast mitogen-activated protein kinase cascade
-
10.1371/journal.pone.0011568 1932-6203
-
Thalhauser C J and Komarova N L 2010 Signal response sensitivity in the yeast mitogen-activated protein kinase cascade PLoS One 5 e11568
-
(2010)
PLoS One
, vol.5
, Issue.7
-
-
Thalhauser, C.J.1
Komarova, N.L.2
-
40
-
-
79955770162
-
Scaffold proteins: Hubs for controlling the flow of cellular information
-
10.1126/science.1198701 0036-8075
-
Good M C, Zalatan J G and Lim W A 2011 Scaffold proteins: hubs for controlling the flow of cellular information Science 332 680-6
-
(2011)
Science
, vol.332
, Issue.6030
, pp. 680-686
-
-
Good, M.C.1
Zalatan, J.G.2
Lim, W.A.3
-
41
-
-
78650929625
-
Tunable signal processing in synthetic MAP kinase cascades
-
10.1016/j.cell.2010.12.014 0092-8674
-
OShaughnessy E C, Palani S, Collins J J and Sarkar C A 2011 Tunable signal processing in synthetic MAP kinase cascades Cell 144 119-31
-
(2011)
Cell
, vol.144
, Issue.1
, pp. 119-131
-
-
Oshaughnessy, E.C.1
Palani, S.2
Collins, J.J.3
Sarkar, C.A.4
-
42
-
-
82955240537
-
Analyzing the homeostasis of signaling proteins by a combination of western blot and fluorescence correlation spectroscopy
-
10.1016/j.bpj.2011.09.058 0006-3495
-
Chung Y-D, Sinzinger M D, Bovee-Geurts P, Krause M, Dinkla S, Joosten I, Koopman W J, Adjobo-Hermans M J W and Brock R 2011 Analyzing the homeostasis of signaling proteins by a combination of western blot and fluorescence correlation spectroscopy Biophys. J. 101 2807-15
-
(2011)
Biophys. J.
, vol.101
, Issue.11
, pp. 2807-2815
-
-
Chung, Y.-D.1
Sinzinger, M.D.2
Bovee-Geurts, P.3
Krause, M.4
Dinkla, S.5
Joosten, I.6
Koopman, W.J.7
Adjobo-Hermans, M.J.W.8
Brock, R.9
-
43
-
-
0842288229
-
Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades
-
DOI 10.1083/jcb.200308060
-
Markevich N I, Hoek J B and Kholodenko B N 2004 Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades J. Cell Biol. 164 353-9 (Pubitemid 38174763)
-
(2004)
Journal of Cell Biology
, vol.164
, Issue.3
, pp. 353-359
-
-
Markevich, N.I.1
Hoek, J.B.2
Kholodenko, B.N.3
-
45
-
-
0029992810
-
Signaling in the yeast pheromone response pathway: Specific and high-affinity interaction of the mitogen-activated protein (MAP) kinases Kss1 and Fus3 with the upstream MAP kinase kinase Ste7
-
Bardwell L, Cook J G, Chang E C, Cairns B R, Thorner J, Bardwell L E E, Cook J G, Chang E C and Cairns B R 1996 Signaling in the yeast pheromone response pathway: specific and high-affinity interaction of the mitogen-activated protein (MAP) kinases Kss1 and Fus3 with the upstream MAP kinase kinase Ste7 Mol. Cell. Biol. 16 3637-50
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 3637-3650
-
-
Bardwell, L.1
Cook, J.G.2
Chang, E.C.3
Cairns, B.R.4
Thorner, J.5
Bardwell, L.E.E.6
Cook, J.G.7
Chang, E.C.8
Cairns, B.R.9
-
46
-
-
73149115306
-
Allosteric interactions direct binding and phosphorylation of asf/sf2 by srpk1
-
10.1021/bi901107q 0006-2960
-
Huynh N, Ma C-T, Giang N, Hagopian J, Ngo J, Adams J and Ghosh G 2009 Allosteric interactions direct binding and phosphorylation of asf/sf2 by srpk1 Biochemistry 48 11432-40
-
(2009)
Biochemistry
, vol.48
, Issue.48
, pp. 11432-11440
-
-
Huynh, N.1
Ma, C.-T.2
Giang, N.3
Hagopian, J.4
Ngo, J.5
Adams, J.6
Ghosh, G.7
-
47
-
-
68049110634
-
The selectivity of receptor tyrosine kinase signaling is controlled by a secondary SH2 domain binding site
-
10.1016/j.cell.2009.05.028 0092-8674
-
Bae J H, Lew E D, Yuzawa S, Tomé F, Lax I and Schlessinger J 2009 The selectivity of receptor tyrosine kinase signaling is controlled by a secondary SH2 domain binding site Cell 138 514-24
-
(2009)
Cell
, vol.138
, Issue.3
, pp. 514-524
-
-
Bae, J.H.1
Lew, E.D.2
Yuzawa, S.3
Tomé, F.4
Lax, I.5
Schlessinger, J.6
-
48
-
-
30544449081
-
A quantitative protein interaction network for the ErbB receptors using protein microarrays
-
DOI 10.1038/nature04177, PII NATURE04177
-
Jones R B, Gordus A, Krall J A and MacBeath G 2006 A quantitative protein interaction network for the ErbB receptors using protein microarrays Nature 439 168-74 (Pubitemid 43083134)
-
(2006)
Nature
, vol.439
, Issue.7073
, pp. 168-174
-
-
Jones, R.B.1
Gordus, A.2
Krall, J.A.3
MacBeath, G.4
-
49
-
-
35048895238
-
A microarray strategy for mapping the substrate specificity of protein tyrosine phosphatase
-
DOI 10.1002/anie.200701601
-
Köhn M et al 2007 A microarray strategy for mapping the substrate specificity of protein tyrosine phosphatase Angew. Chem. Int. Ed. 46 7700-3 (Pubitemid 47557030)
-
(2007)
Angewandte Chemie - International Edition
, vol.46
, Issue.40
, pp. 7700-7703
-
-
Kohn, M.1
Gutierrez-Rodriguez, M.2
Jonkheijm, P.3
Wetzel, S.4
Wacker, R.5
Schroeder, H.6
Prinz, H.7
Niemeyer, C.M.8
Breinbauer, R.9
Szedlacsek, S.E.10
Waldmann, H.11
-
50
-
-
58549118075
-
Linear combinations of docking affinities explain quantitative differences in RTK signaling
-
10.1038/msb.2008.72 1744-4292
-
Gordus A, Krall J A, Beyer E M, Kaushansky A, Wolf-Yadlin A, Sevecka M, Chang B H, Rush J and MacBeath G 2009 Linear combinations of docking affinities explain quantitative differences in RTK signaling Mol. Syst. Biol. 5 235
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 235
-
-
Gordus, A.1
Krall, J.A.2
Beyer, E.M.3
Kaushansky, A.4
Wolf-Yadlin, A.5
Sevecka, M.6
Chang, B.H.7
Rush, J.8
MacBeath, G.9
-
51
-
-
70349156763
-
Dissecting protein function and signaling using protein microarrays
-
10.1016/j.cbpa.2009.06.027 1367-5931
-
Wolf-Yadlin A, Sevecka M and MacBeath G 2009 Dissecting protein function and signaling using protein microarrays Curr. Opin. Chem. Biol. 13 398-405
-
(2009)
Curr. Opin. Chem. Biol.
, vol.13
, Issue.4
, pp. 398-405
-
-
Wolf-Yadlin, A.1
Sevecka, M.2
MacBeath, G.3
-
52
-
-
78650590282
-
Graded enhancement of p53 binding to creb-binding protein (CBP) by multisite phosphorylation
-
10.1073/pnas.1013078107 0027-8424
-
Lee C W, Ferreon J C, Ferreon A C M, Arai M and Wright P E 2010 Graded enhancement of p53 binding to creb-binding protein (CBP) by multisite phosphorylation Proc. Natl Acad. Sci. USA 107 19290-5
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, Issue.45
, pp. 19290-19295
-
-
Lee, C.W.1
Ferreon, J.C.2
Ferreon, A.C.M.3
Arai, M.4
Wright, P.E.5
-
53
-
-
58149145777
-
The biphasic behavior of incoherent feed-forward loops in biomolecular regulatory networks
-
10.1002/bies.20839 0265-9247
-
Kim D, Kwon Y-K and Cho K-H 2008 The biphasic behavior of incoherent feed-forward loops in biomolecular regulatory networks Bioessays 30 1204-11
-
(2008)
Bioessays
, vol.30
, Issue.11-12
, pp. 1204-1211
-
-
Kim, D.1
Kwon, Y.-K.2
Cho, K.-H.3
-
54
-
-
47349095809
-
The incoherent feed-forward loop can generate non-monotonic input functions for genes
-
DOI 10.1038/msb.2008.43, PII MSB200843
-
Kaplan S, Bren A, Dekel E and Alon U 2008 The incoherent feed-forward loop can generate non-monotonic input functions for genes Mol. Syst. Biol. 4 203 (Pubitemid 352001262)
-
(2008)
Molecular Systems Biology
, vol.4
, pp. 203
-
-
Kaplan, S.1
Bren, A.2
Dekel, E.3
Alon, U.4
-
55
-
-
56949098506
-
Molecular titration and ultrasensitivity in regulatory networks
-
10.1016/j.jmb.2008.09.079 0022-2836
-
Buchler N E and Louis M 2008 Molecular titration and ultrasensitivity in regulatory networks J. Mol. Biol. 384 1106-19
-
(2008)
J. Mol. Biol.
, vol.384
, Issue.5
, pp. 1106-1119
-
-
Buchler, N.E.1
Louis, M.2
-
56
-
-
79960942832
-
Effects of saturation and enzyme limitation in feedforward adaptive signal transduction
-
10.1049/iet-syb.2010.0048 1751-8849
-
Krishnan J 2011 Effects of saturation and enzyme limitation in feedforward adaptive signal transduction IET Syst. Biol. 5 208-19
-
(2011)
IET Syst. Biol.
, vol.5
, Issue.3
, pp. 208-219
-
-
Krishnan, J.1
-
57
-
-
34848887670
-
Competing docking interactions can bring about bistability in the MAPK cascade
-
DOI 10.1529/biophysj.107.109132
-
Legewie S, Schoeberl B, Blüthgen N and Herzel H 2007 Competing docking interactions can bring about bistability in the MAPK cascade Biophys. J. 93 2279-88 (Pubitemid 47511127)
-
(2007)
Biophysical Journal
, vol.93
, Issue.7
, pp. 2279-2288
-
-
Legewie, S.1
Schoeberl, B.2
Bluthgen, N.3
Herzel, H.4
-
58
-
-
67149138163
-
Protein sequestration generates a flexible ultrasensitive response in a genetic network
-
10.1038/msb.2009.30 1744-4292
-
Buchler N E and Cross F R 2009 Protein sequestration generates a flexible ultrasensitive response in a genetic network Mol. Syst. Biol. 5 272
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 272
-
-
Buchler, N.E.1
Cross, F.R.2
-
60
-
-
0037022274
-
Product dependence and bifunctionality compromise the ultrasensitivity of signal transduction cascades
-
DOI 10.1073/pnas.022267399
-
Ortega F, Acerenza L, Westerhoff H V, Mas F and Cascante M 2002 Product dependence and bifunctionality compromise the ultrasensitivity of signal transduction cascades Proc. Natl Acad. Sci. USA 99 1170-5 (Pubitemid 34136465)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.3
, pp. 1170-1175
-
-
Ortega, F.1
Acerenza, L.2
Westerhoff, H.V.3
Mas, F.4
Cascante, M.5
-
61
-
-
84859933685
-
Bell-shaped and ultrasensitive dose-response in phosphorylation- dephosphorylation cycles: The role of kinase-phosphatase complex formation
-
10.1186/1752-0509-6-26 1752-0509
-
Szomolay B and Shahrezaei V 2012 Bell-shaped and ultrasensitive dose-response in phosphorylation-dephosphorylation cycles: the role of kinase-phosphatase complex formation BMC Syst. Biol. 6 26
-
(2012)
BMC Syst. Biol.
, vol.6
, Issue.1
, pp. 26
-
-
Szomolay, B.1
Shahrezaei, V.2
|