-
1
-
-
33745604636
-
Suz12 binds to silenced regions of the genome in a cell-type-specific manner
-
Squazzo, S.L., O'Geen, H., Komashko, V.M., Krig, S.R., Jin, V.X., Jang, S.W., Margueron, R., Reinberg, D., Green, R. and Farnham, P.J. (2006) Suz12 binds to silenced regions of the genome in a cell-type-specific manner. Genome Res., 16, 890-900.
-
(2006)
Genome Res
, vol.16
, pp. 890-900
-
-
Squazzo, S.L.1
O'Geen, H.2
Komashko, V.M.3
Krig, S.R.4
Jin, V.X.5
Jang, S.W.6
Margueron, R.7
Reinberg, D.8
Green, R.9
Farnham, P.J.10
-
2
-
-
34848825691
-
Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex
-
Lanzuolo, C., Roure, V., Dekker, J., Bantignies, F. and Orlando, V. (2007) Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex. Nat. Cell Biol., 9, 1167-1174.
-
(2007)
Nat. Cell Biol
, vol.9
, pp. 1167-1174
-
-
Lanzuolo, C.1
Roure, V.2
Dekker, J.3
Bantignies, F.4
Orlando, V.5
-
3
-
-
8844265508
-
Epigenetic regulation of cellular memory by the polycomb and trithorax group proteins
-
Ringrose, L. and Paro, R. (2004) Epigenetic regulation of cellular memory by the Polycomb and Trithorax group proteins. Annu. Rev. Genet., 38, 413-443.
-
(2004)
Annu. Rev. Genet
, vol.38
, pp. 413-443
-
-
Ringrose, L.1
Paro, R.2
-
4
-
-
33745225872
-
Genome-wide analysis of polycomb targets in drosophila melanogaster
-
Schwartz, Y.B., Kahn, T.G., Nix, D.A., Li, X.Y., Bourgon, R., Biggin, M. and Pirrotta, V. (2006) Genome-wide analysis of Polycomb targets in Drosophila melanogaster. Nat. Genet., 38, 700-705.
-
(2006)
Nat. Genet
, vol.38
, pp. 700-705
-
-
Schwartz, Y.B.1
Kahn, T.G.2
Nix, D.A.3
Li, X.Y.4
Bourgon, R.5
Biggin, M.6
Pirrotta, V.7
-
5
-
-
55449105221
-
Genomewide analysis of prc1 and prc2 occupancy identifies two classes of bivalent domains
-
Ku, M., Koche, R.P., Rheinbay, E., Mendenhall, E.M., Endoh, M., Mikkelsen, T.S., Presser, A., Nusbaum, C., Xie, X., Chi, A.S. et al. (2008) Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains. PLoS Genet., 4, e1000242.
-
(2008)
PLoS Genet
, vol.4
-
-
Ku, M.1
Koche, R.P.2
Rheinbay, E.3
Mendenhall, E.M.4
Endoh, M.5
Mikkelsen, T.S.6
Presser, A.7
Nusbaum, C.8
Xie, X.9
Chi, A.S.10
-
6
-
-
33646870495
-
Genome-wide mapping of polycomb target genes unravels their roles in cell fate transitions
-
Bracken, A.P., Dietrich, N., Pasini, D., Hansen, K.H. and Helin, K. (2006) Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions. Genes Dev., 20, 1123-1136.
-
(2006)
Genes Dev
, vol.20
, pp. 1123-1136
-
-
Bracken, A.P.1
Dietrich, N.2
Pasini, D.3
Hansen, K.H.4
Helin, K.5
-
7
-
-
33646865180
-
Control of developmental regulators by polycomb in human embryonic stem cells
-
Lee, T.I., Jenner, R.G., Boyer, L.A., Guenther, M.G., Levine, S.S., Kumar, R.M., Chevalier, B., Johnstone, S.E., Cole, M.F., Isono, K. et al. (2006) Control of developmental regulators by Polycomb in human embryonic stem cells. Cell, 125, 301-313.
-
(2006)
Cell
, vol.125
, pp. 301-313
-
-
Lee, T.I.1
Jenner, R.G.2
Boyer, L.A.3
Guenther, M.G.4
Levine, S.S.5
Kumar, R.M.6
Chevalier, B.7
Johnstone, S.E.8
Cole, M.F.9
Isono, K.10
-
8
-
-
33646882068
-
Polycomb complexes repress developmental regulators in murine embryonic stem cells
-
Boyer, L.A., Plath, K., Zeitlinger, J., Brambrink, T., Medeiros, L.A., Lee, T.I., Levine, S.S., Wernig, M., Tajonar, A., Ray, M.K. et al. (2006) Polycomb complexes repress developmental regulators in murine embryonic stem cells. Nature, 441, 349-353.
-
(2006)
Nature
, vol.441
, pp. 349-353
-
-
Boyer, L.A.1
Plath, K.2
Zeitlinger, J.3
Brambrink, T.4
Medeiros, L.A.5
Lee, T.I.6
Levine, S.S.7
Wernig, M.8
Tajonar, A.9
Ray, M.K.10
-
9
-
-
69449086947
-
A vertebrate polycomb response element governs segmentation of the posterior hindbrain
-
Sing, A., Pannell, D., Karaiskakis, A., Sturgeon, K., Djabali, M., Ellis, J., Lipshitz, H.D. and Cordes, S.P. (2009) A vertebrate Polycomb response element governs segmentation of the posterior hindbrain. Cell, 138, 885-897.
-
(2009)
Cell
, vol.138
, pp. 885-897
-
-
Sing, A.1
Pannell, D.2
Karaiskakis, A.3
Sturgeon, K.4
Djabali, M.5
Ellis, J.6
Lipshitz, H.D.7
Cordes, S.P.8
-
10
-
-
34548434716
-
Wholegenome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells
-
Pan, G., Tian, S., Nie, J., Yang, C., Ruotti, V., Wei, H., Jonsdottir, G.A., Stewart, R. and Thomson, J.A. (2007) Wholegenome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells. Cell Stem Cell, 1, 299-312.
-
(2007)
Cell Stem Cell
, vol.1
, pp. 299-312
-
-
Pan, G.1
Tian, S.2
Nie, J.3
Yang, C.4
Ruotti, V.5
Wei, H.6
Jonsdottir, G.A.7
Stewart, R.8
Thomson, J.A.9
-
11
-
-
34548424709
-
Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells
-
Zhao, X.D., Han, X., Chew, J.L., Liu, J., Chiu, K.P., Choo, A., Orlov, Y.L., Sung, W.K., Shahab, A., Kuznetsov, V.A. et al. (2007) Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells. Cell Stem Cell, 1, 286-298.
-
(2007)
Cell Stem Cell
, vol.1
, pp. 286-298
-
-
Zhao, X.D.1
Han, X.2
Chew, J.L.3
Liu, J.4
Chiu, K.P.5
Choo, A.6
Orlov, Y.L.7
Sung, W.K.8
Shahab, A.9
Kuznetsov, V.A.10
-
12
-
-
77958556788
-
Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing
-
Choi, J.H., Li, Y., Guo, J., Pei, L., Rauch, T.A., Kramer, R.S., Macmil, S.L., Wiley, G.B., Bennett, L.B., Schnabel, J.L. et al. (2010) Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing. PLoS One, 5, e13020.
-
(2010)
PLoS One
, vol.5
-
-
Choi, J.H.1
Li, Y.2
Guo, J.3
Pei, L.4
Rauch, T.A.5
Kramer, R.S.6
MacMil, S.L.7
Wiley, G.B.8
Bennett, L.B.9
Schnabel, J.L.10
-
13
-
-
52949106124
-
Stability and dynamics of polycomb target sites in drosophila development
-
Kwong, C., Adryan, B., Bell, I., Meadows, L., Russell, S., Manak, J.R. and White, R. (2008) Stability and dynamics of polycomb target sites in Drosophila development. PLoS Genet., 4, e1000178.
-
(2008)
PLoS Genet
, vol.4
-
-
Kwong, C.1
Adryan, B.2
Bell, I.3
Meadows, L.4
Russell, S.5
Manak, J.R.6
White, R.7
-
14
-
-
58849088872
-
Functional anatomy of polycomb and trithorax chromatin landscapes in drosophila embryos
-
Schuettengruber, B., Ganapathi, M., Leblanc, B., Portoso, M., Jaschek, R., Tolhuis, B., van Lohuizen, M., Tanay, A. and Cavalli, G. (2009) Functional anatomy of polycomb and trithorax chromatin landscapes in Drosophila embryos. PLoS Biol., 7, e13.
-
(2009)
PLoS Biol
, vol.7
-
-
Schuettengruber, B.1
Ganapathi, M.2
Leblanc, B.3
Portoso, M.4
Jaschek, R.5
Tolhuis, B.6
Van Lohuizen, M.7
Tanay, A.8
Cavalli, G.9
-
15
-
-
33745258986
-
Genome-wide profiling of PRC1 and PRC2 polycomb chromatin binding in drosophila melanogaster
-
Tolhuis, B., de Wit, E., Muijrers, I., Teunissen, H., Talhout, W., van Steensel, B. and van Lohuizen, M. (2006) Genome-wide profiling of PRC1 and PRC2 Polycomb chromatin binding in Drosophila melanogaster. Nat. Genet., 38, 694-699.
-
(2006)
Nat. Genet
, vol.38
, pp. 694-699
-
-
Tolhuis, B.1
De Wit, E.2
Muijrers, I.3
Teunissen, H.4
Talhout, W.5
Van Steensel, B.6
Van Lohuizen, M.7
-
16
-
-
61849178049
-
Genome-wide profiling of histone H3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis
-
Ke, X.S., Qu, Y., Rostad, K., Li, W.C., Lin, B., Halvorsen, O.J., Haukaas, S.A., Jonassen, I., Petersen, K., Goldfinger, N. et al. (2009) Genome-wide profiling of histone h3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. PLoS One, 4, e4687.
-
(2009)
PLoS One
, vol.4
-
-
Ke, X.S.1
Qu, Y.2
Rostad, K.3
Li, W.C.4
Lin, B.5
Halvorsen, O.J.6
Haukaas, S.A.7
Jonassen, I.8
Petersen, K.9
Goldfinger, N.10
-
17
-
-
0032087103
-
A conserved sequence motif in polycomb-response elements
-
Mihaly, J., Mishra, R.K. and Karch, F. (1998) A Conserved Sequence Motif in Polycomb-Response Elements. Mol. Cell, 1, 1065-1066.
-
(1998)
Mol. Cell
, vol.1
, pp. 1065-1066
-
-
Mihaly, J.1
Mishra, R.K.2
Karch, F.3
-
18
-
-
33847084602
-
Genome regulation by polycomb and trithorax proteins
-
Schuettengruber, B., Chourrout, D., Vervoort, M., Leblanc, B. and Cavalli, G. (2007) Genome Regulation by Polycomb and Trithorax Proteins. Cell, 128, 735-745.
-
(2007)
Cell
, vol.128
, pp. 735-745
-
-
Schuettengruber, B.1
Chourrout, D.2
Vervoort, M.3
Leblanc, B.4
Cavalli, G.5
-
19
-
-
2942567557
-
Molecular cloning and functional characterization of the transcription factor YY2
-
Nguyen, N., Zhang, X., Olashaw, N. and Seto, E. (2004) Molecular cloning and functional characterization of the transcription factor YY2. J. Biol. Chem., 279, 25927-25934.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 25927-25934
-
-
Nguyen, N.1
Zhang, X.2
Olashaw, N.3
Seto, E.4
-
20
-
-
0032087892
-
The drosophila polycomb group gene pleiohomeotic encodes a DNA binding protein with homology to the transcription factor YY1
-
Brown, J.L., Mucci, D., Whiteley, M., Dirksen, M.L. and Kassis, J.A. (1998) The Drosophila Polycomb group gene pleiohomeotic encodes a DNA binding protein with homology to the transcription factor YY1. Mol. Cell, 1, 1057-1064.
-
(1998)
Mol. Cell
, vol.1
, pp. 1057-1064
-
-
Brown, J.L.1
Mucci, D.2
Whiteley, M.3
Dirksen, M.L.4
Kassis, J.A.5
-
21
-
-
2942574510
-
Hierarchical recruitment of polycomb group silencing complexes
-
Wang, L., Brown, J.L., Cao, R., Zhang, Y., Kassis, J.A. and Jones, R.S. (2004) Hierarchical recruitment of polycomb group silencing complexes. Mol. Cell, 14, 637-646.
-
(2004)
Mol. Cell
, vol.14
, pp. 637-646
-
-
Wang, L.1
Brown, J.L.2
Cao, R.3
Zhang, Y.4
Kassis, J.A.5
Jones, R.S.6
-
22
-
-
0031011613
-
Co-localization of polycomb protein and GAGA factor on regulatory elements responsible for the maintenance of homeotic gene expression
-
Strutt, H., Cavalli, G. and Paro, R. (1997) Co-localization of Polycomb protein and GAGA factor on regulatory elements responsible for the maintenance of homeotic gene expression. EMBO J., 16, 3621-3632.
-
(1997)
EMBO J
, vol.16
, pp. 3621-3632
-
-
Strutt, H.1
Cavalli, G.2
Paro, R.3
-
23
-
-
0035155843
-
DSP1, an HMG-like protein, is involved in the regulation of homeotic genes
-
Decoville, M., Giacomello, E., Leng, M. and Locker, D. (2001) DSP1, an HMG-like Protein, Is Involved in the Regulation of Homeotic Genes. Genetics, 157, 237-244.
-
(2001)
Genetics
, vol.157
, pp. 237-244
-
-
Decoville, M.1
Giacomello, E.2
Leng, M.3
Locker, D.4
-
24
-
-
0034953140
-
Site-specific recognition of a 70-base-pair element containing d(GA)(n) repeats mediates bithoraxoid polycomb group response element-dependent silencing
-
Hodgson, J.W., Argiropoulos, B. and Brock, H.W. (2001) Site-specific recognition of a 70-base-pair element containing d(GA)(n) repeats mediates bithoraxoid polycomb group response element-dependent silencing. Mol. Cell. Biol., 21, 4528-4543.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 4528-4543
-
-
Hodgson, J.W.1
Argiropoulos, B.2
Brock, H.W.3
-
25
-
-
1842457722
-
Chromatin inheritance upon zeste-mediated brahma recruitment at a minimal cellular memory module
-
Dejardin, J. and Cavalli, G. (2004) Chromatin inheritance upon Zeste-mediated Brahma recruitment at a minimal cellular memory module. EMBO J., 23, 857-868.
-
(2004)
EMBO J
, vol.23
, pp. 857-868
-
-
Dejardin, J.1
Cavalli, G.2
-
26
-
-
0030749506
-
A polycomb and GAGA dependent silencer adjoins the fab-7 boundary in the drosophila bithorax complex
-
Hagstrom, K., Muller, M. and Schedl, P. (1997) A Polycomb and GAGA dependent silencer adjoins the Fab-7 boundary in the Drosophila bithorax complex. Genetics, 146, 1365-1380.
-
(1997)
Genetics
, vol.146
, pp. 1365-1380
-
-
Hagstrom, K.1
Muller, M.2
Schedl, P.3
-
27
-
-
15844430105
-
Recruitment of drosophila polycomb group proteins to chromatin by DSP1
-
Dejardin, J., Rappailles, A., Cuvier, O., Grimaud, C., Decoville, M., Locker, D. and Cavalli, G. (2005) Recruitment of Drosophila Polycomb group proteins to chromatin by DSP1. Nature, 434, 533-538.
-
(2005)
Nature
, vol.434
, pp. 533-538
-
-
Dejardin, J.1
Rappailles, A.2
Cuvier, O.3
Grimaud, C.4
Decoville, M.5
Locker, D.6
Cavalli, G.7
-
28
-
-
32044462966
-
Efficient and specific targeting of Polycomb group proteins requires cooperative interaction between Grainyhead and Pleiohomeotic
-
Blastyak, A., Mishra, R.K., Karch, F. and Gyurkovics, H. (2006) Efficient and specific targeting of Polycomb group proteins requires cooperative interaction between Grainyhead and Pleiohomeotic. Mol. Cell. Biol., 26, 1434-1444.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 1434-1444
-
-
Blastyak, A.1
Mishra, R.K.2
Karch, F.3
Gyurkovics, H.4
-
29
-
-
25144495664
-
An Sp1/KLF binding site is important for the activity of a polycomb group response element from the drosophila engrailed gene
-
Brown, J.L., Grau, D.J., DeVido, S.K. and Kassis, J.A. (2005) An Sp1/KLF binding site is important for the activity of a Polycomb group response element from the Drosophila engrailed gene. Nucleic Acids Res., 33, 5181-5189.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5181-5189
-
-
Brown, J.L.1
Grau, D.J.2
DeVido, S.K.3
Kassis, J.A.4
-
30
-
-
33846983276
-
Polycomb/trithorax response elements and epigenetic memory of cell identity
-
Ringrose, L. and Paro, R. (2007) Polycomb/Trithorax response elements and epigenetic memory of cell identity. Development, 134, 223-232.
-
(2007)
Development
, vol.134
, pp. 223-232
-
-
Ringrose, L.1
Paro, R.2
-
31
-
-
0028210606
-
Unusual properties of regulatory DNA from the Drosophila engrailed gene: Three "pairing-sensitive" sites within a 1.6-kb region
-
Kassis, J.A. (1994) Unusual properties of regulatory DNA from the Drosophila engrailed gene: three "pairing-sensitive" sites within a 1.6-kb region. Genetics, 136, 1025-1038.
-
(1994)
Genetics
, vol.136
, pp. 1025-1038
-
-
Kassis, J.A.1
-
32
-
-
0028814510
-
Identification of polycomb and trithorax group responsive elements in the regulatory region of the drosophila homeotic gene sex combs reduced
-
Gindhart, J.G. Jr and Kaufman, T.C. (1995) Identification of Polycomb and trithorax group responsive elements in the regulatory region of the Drosophila homeotic gene Sex combs reduced. Genetics, 139, 797-814.
-
(1995)
Genetics
, vol.139
, pp. 797-814
-
-
Gindhart Jr., J.G.1
Kaufman, T.C.2
-
33
-
-
0036236773
-
A complex array of dna-binding proteins required for pairing-sensitive silencing by A polycomb group response element from the drosophila engrailed gene
-
Americo, J., Whiteley, M., Brown, J.L., Fujioka, M., Jaynes, J.B. and Kassis, J.A. (2002) A complex array of DNA-binding proteins required for pairing-sensitive silencing by a polycomb group response element from the Drosophila engrailed gene. Genetics, 160, 1561-1571.
-
(2002)
Genetics
, vol.160
, pp. 1561-1571
-
-
Americo, J.1
Whiteley, M.2
Brown, J.L.3
Fujioka, M.4
Jaynes, J.B.5
Kassis, J.A.6
-
34
-
-
0042386676
-
Identification and characterization of polyhomeotic PREs and TREs
-
Bloyer, S., Cavalli, G., Brock, H.W. and Dura, J.M. (2003) Identification and characterization of polyhomeotic PREs and TREs. Dev. Biol., 261, 426-442.
-
(2003)
Dev. Biol
, vol.261
, pp. 426-442
-
-
Bloyer, S.1
Cavalli, G.2
Brock, H.W.3
Dura, J.M.4
-
35
-
-
17644406720
-
The Mcp element from the bithorax complex contains an insulator that is capable of pairwise interactions and can facilitate enhancer-promoter communication
-
Gruzdeva, N., Kyrchanova, O., Parshikov, A., Kullyev, A. and Georgiev, P. (2005) The Mcp element from the bithorax complex contains an insulator that is capable of pairwise interactions and can facilitate enhancer-promoter communication. Mol. Cell. Biol., 25, 3682-3689.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 3682-3689
-
-
Gruzdeva, N.1
Kyrchanova, O.2
Parshikov, A.3
Kullyev, A.4
Georgiev, P.5
-
36
-
-
40949087581
-
The role of polycomb-group response elements in regulation of engrailed transcription in drosophila
-
DeVido, S.K., Kwon, D., Brown, J.L. and Kassis, J.A. (2008) The role of Polycomb-group response elements in regulation of engrailed transcription in Drosophila. Development, 135, 669-676.
-
(2008)
Development
, vol.135
, pp. 669-676
-
-
DeVido, S.K.1
Kwon, D.2
Brown, J.L.3
Kassis, J.A.4
-
37
-
-
44149127446
-
Replacement of a drosophila polycomb response element core, and in situ analysis of its DNA motifs
-
Kozma, G., Bender, W. and Sipos, L. (2008) Replacement of a Drosophila Polycomb response element core, and in situ analysis of its DNA motifs. Mol. Genet. Genomics, 279, 595-603.
-
(2008)
Mol. Genet. Genomics
, vol.279
, pp. 595-603
-
-
Kozma, G.1
Bender, W.2
Sipos, L.3
-
38
-
-
75149197487
-
Characterization of the polycomb group response elements of the drosophila melanogaster invected locus
-
Cunningham, M.D., Brown, J.L. and Kassis, J.A. (2010) Characterization of the polycomb group response elements of the Drosophila melanogaster invected Locus. Mol. Cell. Biol., 30, 820-828.
-
(2010)
Mol. Cell. Biol
, vol.30
, pp. 820-828
-
-
Cunningham, M.D.1
Brown, J.L.2
Kassis, J.A.3
-
39
-
-
0033996526
-
Structure of a polycomb response element and in vitro binding of polycomb group complexes containing GAGA factor
-
Horard, B., Tatout, C., Poux, S. and Pirrotta, V. (2000) Structure of a polycomb response element and in vitro binding of polycomb group complexes containing GAGA factor. Mol. Cell. Biol., 20, 3187-3197.
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 3187-3197
-
-
Horard, B.1
Tatout, C.2
Poux, S.3
Pirrotta, V.4
-
40
-
-
0242362735
-
Genome-wide prediction of polycomb/trithorax response elements in drosophila melanogaster
-
Ringrose, L., Rehmsmeier, M., Dura, J.M. and Paro, R. (2003) Genome-wide prediction of Polycomb/Trithorax response elements in Drosophila melanogaster. Dev. Cell, 5, 759-771.
-
(2003)
Dev. Cell
, vol.5
, pp. 759-771
-
-
Ringrose, L.1
Rehmsmeier, M.2
Dura, J.M.3
Paro, R.4
-
41
-
-
73149111929
-
A region of the human HOXD cluster that confers polycomb-group responsiveness
-
Woo, C.J., Kharchenko, P.V., Daheron, L., Park, P.J. and Kingston, R.E. (2010) A region of the human HOXD cluster that confers polycomb-group responsiveness. Cell, 140, 99-110.
-
(2010)
Cell
, vol.140
, pp. 99-110
-
-
Woo, C.J.1
Kharchenko, P.V.2
Daheron, L.3
Park, P.J.4
Kingston, R.E.5
-
42
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen, T.S., Ku, M., Jaffe, D.B., Issac, B., Lieberman, E., Giannoukos, G., Alvarez, P., Brockman, W., Kim, T.-K., Koche, R.P. et al. (2007) Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature, 448, 553-560.
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.-K.9
Koche, R.P.10
-
43
-
-
65049087212
-
Genome-wide analysis of histone H3 lysine 27 trimethylation by chip-chip in gastric cancer patients
-
Zhang, L., Zhong, K., Dai, Y. and Zhou, H. (2009) Genome-wide analysis of histone H3 lysine 27 trimethylation by ChIP-chip in gastric cancer patients. J. Gastroenterol., 44, 305-312.
-
(2009)
J. Gastroenterol
, vol.44
, pp. 305-312
-
-
Zhang, L.1
Zhong, K.2
Dai, Y.3
Zhou, H.4
-
44
-
-
67349169780
-
Genome-wide analysis of histone methylation reveals chromatin state-based regulation of gene transcription and function of memory CD8+ T cells
-
Araki, Y., Wang, Z., Zang, C., Wood, W.H. 3rd, Schones, D., Cui, K., Roh, T.Y., Lhotsky, B., Wersto, R.P., Peng, W. et al. (2009) Genome-wide analysis of histone methylation reveals chromatin state-based regulation of gene transcription and function of memory CD8+ T cells. Immunity, 30, 912-925.
-
(2009)
Immunity
, vol.30
, pp. 912-925
-
-
Araki, Y.1
Wang, Z.2
Zang, C.3
Wood III, W.H.4
Schones, D.5
Cui, K.6
Roh, T.Y.7
Lhotsky, B.8
Wersto, R.P.9
Peng, W.10
-
45
-
-
18944408348
-
Mapping global histone methylation patterns in the coding regions of human genes
-
Miao, F. and Natarajan, R. (2005) Mapping Global Histone Methylation Patterns in the Coding Regions of Human Genes. Mol. Cell. Biol., 25, 4650-4661.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 4650-4661
-
-
Miao, F.1
Natarajan, R.2
-
46
-
-
44349131472
-
Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation
-
Kondo, Y., Shen, L., Cheng, A.S., Ahmed, S., Boumber, Y., Charo, C., Yamochi, T., Urano, T., Furukawa, K., Kwabi-Addo, B. et al. (2008) Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation. Nat. Genet., 40, 741-750.
-
(2008)
Nat. Genet
, vol.40
, pp. 741-750
-
-
Kondo, Y.1
Shen, L.2
Cheng, A.S.3
Ahmed, S.4
Boumber, Y.5
Charo, C.6
Yamochi, T.7
Urano, T.8
Furukawa, K.9
Kwabi-Addo, B.10
-
47
-
-
34248169728
-
The polycomb group protein Suz12 is required for embryonic stem cell differentiation
-
Pasini, D., Bracken, A.P., Hansen, J.B., Capillo, M. and Helin, K. (2007) The polycomb group protein Suz12 is required for embryonic stem cell differentiation. Mol. Cell. Biol., 27, 3769-3779.
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 3769-3779
-
-
Pasini, D.1
Bracken, A.P.2
Hansen, J.B.3
Capillo, M.4
Helin, K.5
-
48
-
-
3042781030
-
Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27
-
Kirmizis, A., Bartley, S.M., Kuzmichev, A., Margueron, R., Reinberg, D., Green, R. and Farnham, P.J. (2004) Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27. Genes Dev., 18, 1592-1605.
-
(2004)
Genes Dev
, vol.18
, pp. 1592-1605
-
-
Kirmizis, A.1
Bartley, S.M.2
Kuzmichev, A.3
Margueron, R.4
Reinberg, D.5
Green, R.6
Farnham, P.J.7
-
49
-
-
58149214356
-
Global mapping of H3K4me3 and H3K27me3 reveals specificity and plasticity in lineage fate determination of differentiating CD4+ T cells
-
Wei, G., Wei, L., Zhu, J., Zang, C., Hu-Li, J., Yao, Z., Cui, K., Kanno, Y., Roh, T.Y., Watford, W.T. et al. (2009) Global mapping of H3K4me3 and H3K27me3 reveals specificity and plasticity in lineage fate determination of differentiating CD4+T cells. Immunity, 30, 155-167.
-
(2009)
Immunity
, vol.30
, pp. 155-167
-
-
Wei, G.1
Wei, L.2
Zhu, J.3
Zang, C.4
Hu-Li, J.5
Yao, Z.6
Cui, K.7
Kanno, Y.8
Roh, T.Y.9
Watford, W.T.10
-
50
-
-
33747826650
-
Jpredictor: A versatile tool for the prediction of cis-regulatory elements
-
Fiedler, T. and Rehmsmeier, M. (2006) jPREdictor: a versatile tool for the prediction of cis-regulatory elements. Nucleic Acids Res., 34, W546-550.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Fiedler, T.1
Rehmsmeier, M.2
-
51
-
-
54949151898
-
Evolutionary plasticity of polycomb/trithorax response elements in drosophila species
-
Hauenschild, A., Ringrose, L., Altmutter, C., Paro, R. and Rehmsmeier, M. (2008) Evolutionary plasticity of polycomb/trithorax response elements in Drosophila species. PLoS Biol., 6, e261.
-
(2008)
PLoS Biol
, vol.6
-
-
Hauenschild, A.1
Ringrose, L.2
Altmutter, C.3
Paro, R.4
Rehmsmeier, M.5
-
52
-
-
77953811056
-
Prediction of polycomb target genes in mouse embryonic stem cells
-
Liu, Y., Shao, Z. and Yuan, G.C. (2010) Prediction of Polycomb target genes in mouse embryonic stem cells. Genomics, 96, 17-26.
-
(2010)
Genomics
, vol.96
, pp. 17-26
-
-
Liu, Y.1
Shao, Z.2
Yuan, G.C.3
-
53
-
-
0037418234
-
Genomewide analysis of drosophila GAGA factor target genes reveals context-dependent DNA binding
-
van Steensel, B., Delrow, J. and Bussemaker, H.J. (2003) Genomewide analysis of Drosophila GAGA factor target genes reveals context-dependent DNA binding. Proc. Natl Acad. Sci. USA, 100, 2580-2585.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 2580-2585
-
-
Van Steensel, B.1
Delrow, J.2
Bussemaker, H.J.3
-
54
-
-
0036161259
-
Gene selection for cancer classification using support vector machines
-
Guyon, I., Weston, J., Barnhill, S. and Vapnik, V. (2002) Gene Selection for Cancer Classification using Support Vector Machines. Mach. Learn., 46, 389-422.
-
(2002)
Mach. Learn
, vol.46
, pp. 389-422
-
-
Guyon, I.1
Weston, J.2
Barnhill, S.3
Vapnik, V.4
-
55
-
-
33645157313
-
Gene selection algorithms for microarray data based on least squares support vector machine
-
Tang, E.K., Suganthan, P.N. and Yao, X. (2006) Gene selection algorithms for microarray data based on least squares support vector machine. BMC Bioinformatics, 7, 95.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 95
-
-
Tang, E.K.1
Suganthan, P.N.2
Yao, X.3
-
56
-
-
0346252360
-
Classification of protein quaternary structure with support vector machine
-
Zhang, S.W., Pan, Q., Zhang, H.C., Zhang, Y.L. and Wang, H.Y. (2003) Classification of protein quaternary structure with support vector machine. Bioinformatics, 19, 2390-2396.
-
(2003)
Bioinformatics
, vol.19
, pp. 2390-2396
-
-
Zhang, S.W.1
Pan, Q.2
Zhang, H.C.3
Zhang, Y.L.4
Wang, H.Y.5
-
57
-
-
36949013631
-
Support vector machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs
-
Shamim, M.T., Anwaruddin, M. and Nagarajaram, H.A. (2007) Support Vector Machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs. Bioinformatics, 23, 3320-3327.
-
(2007)
Bioinformatics
, vol.23
, pp. 3320-3327
-
-
Shamim, M.T.1
Anwaruddin, M.2
Nagarajaram, H.A.3
-
58
-
-
0036358995
-
The spectrum kernel: A string kernel for SVM protein classification
-
Leslie, C., Eskin, E. and Noble, W.S. (2002) The spectrum kernel: a string kernel for SVM protein classification. Pac. Symp. Biocomput., 7, 564-575.
-
(2002)
Pac. Symp. Biocomput
, vol.7
, pp. 564-575
-
-
Leslie, C.1
Eskin, E.2
Noble, W.S.3
-
59
-
-
0033636139
-
Support vector machine classification and validation of cancer tissue samples using microarray expression data
-
Furey, T.S., Cristianini, N., Duffy, N., Bednarski, D.W., Schummer, M. and Haussler, D. (2000) Support vector machine classification and validation of cancer tissue samples using microarray expression data. Bioinformatics, 16, 906-914.
-
(2000)
Bioinformatics
, vol.16
, pp. 906-914
-
-
Furey, T.S.1
Cristianini, N.2
Duffy, N.3
Bednarski, D.W.4
Schummer, M.5
Haussler, D.6
-
60
-
-
64249128124
-
Tissue characterization with an electrical spectroscopy SVM classifier
-
Laufer, S. and Rubinsky, B. (2009) Tissue characterization with an electrical spectroscopy SVM classifier. IEEE Trans. Biomed. Eng., 56, 525-528.
-
(2009)
IEEE Trans. Biomed. Eng
, vol.56
, pp. 525-528
-
-
Laufer, S.1
Rubinsky, B.2
-
61
-
-
70449568283
-
Comparing artificial neural networks, general linear models and support vector machines in building predictive models for small interfering RNAs
-
McQuisten, K.A. and Peek, A.S. (2009) Comparing artificial neural networks, general linear models and support vector machines in building predictive models for small interfering RNAs. PLoS One, 4, e7522.
-
(2009)
PLoS One
, vol.4
-
-
McQuisten, K.A.1
Peek, A.S.2
-
62
-
-
31344435874
-
Reducing multiclass cancer classification to binary by output coding and SVM
-
Shen, L. and Tan, E.C. (2006) Reducing multiclass cancer classification to binary by output coding and SVM. Comput. Biol. Chem., 30, 63-71.
-
(2006)
Comput. Biol. Chem
, vol.30
, pp. 63-71
-
-
Shen, L.1
Tan, E.C.2
-
63
-
-
33746051706
-
Computational prediction of methylation status in human genomic sequences
-
Das, R., Dimitrova, N., Xuan, Z., Rollins, R.A., Haghighi, F., Edwards, J.R., Ju, J., Bestor, T.H. and Zhang, M.Q. (2006) Computational prediction of methylation status in human genomic sequences. Proc. Natl Acad. Sci. USA, 103, 10713-10716.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 10713-10716
-
-
Das, R.1
Dimitrova, N.2
Xuan, Z.3
Rollins, R.A.4
Haghighi, F.5
Edwards, J.R.6
Ju, J.7
Bestor, T.H.8
Zhang, M.Q.9
-
64
-
-
33645777446
-
Cpg island methylation in human lymphocytes is highly correlated with DNA sequence, repeats, and predicted DNA structure
-
Bock, C., Paulsen, M., Tierling, S., Mikeska, T., Lengauer, T. and Walter, J. (2006) CpG island methylation in human lymphocytes is highly correlated with DNA sequence, repeats, and predicted DNA structure. PLoS Genet., 2, e26.
-
(2006)
PLoS Genet
, vol.2
-
-
Bock, C.1
Paulsen, M.2
Tierling, S.3
Mikeska, T.4
Lengauer, T.5
Walter, J.6
-
65
-
-
34248358308
-
Hyperconserved CpG domains underlie Polycomb-binding sites
-
Tanay, A., O'Donnell, A.H., Damelin, M. and Bestor, T.H. (2007) Hyperconserved CpG domains underlie Polycomb-binding sites. Proc. Natl Acad. Sci. USA, 104, 5521-5526.
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 5521-5526
-
-
Tanay, A.1
O'Donnell, A.H.2
Damelin, M.3
Bestor, T.H.4
-
66
-
-
78650684739
-
Gc-rich sequence elements recruit PRC2 in mammalian ES cells
-
Mendenhall, E.M., Koche, R.P., Truong, T., Zhou, V.W., Issac, B., Chi, A.S., Ku, M. and Bernstein, B.E. (2010) GC-rich sequence elements recruit PRC2 in mammalian ES cells. PLoS Genet., 6, e1001244.
-
(2010)
PLoS Genet
, vol.6
-
-
Mendenhall, E.M.1
Koche, R.P.2
Truong, T.3
Zhou, V.W.4
Issac, B.5
Chi, A.S.6
Ku, M.7
Bernstein, B.E.8
-
67
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
Meissner, A., Mikkelsen, T.S., Gu, H., Wernig, M., Hanna, J., Sivachenko, A., Zhang, X., Bernstein, B.E., Nusbaum, C., Jaffe, D.B. et al. (2008) Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature, 454, 766-770.
-
(2008)
Nature
, vol.454
, pp. 766-770
-
-
Meissner, A.1
Mikkelsen, T.S.2
Gu, H.3
Wernig, M.4
Hanna, J.5
Sivachenko, A.6
Zhang, X.7
Bernstein, B.E.8
Nusbaum, C.9
Jaffe, D.B.10
-
68
-
-
84875555100
-
-
Flybase. (2010)
-
Flybase. (2010).
-
-
-
-
69
-
-
2342501364
-
Comparative genomics identifies a flagellar and basal body proteome that includes the bbs5 human disease gene
-
Li, J.B., Gerdes, J.M., Haycraft, C.J., Fan, Y., Teslovich, T.M., May-Simera, H., Li, H., Blacque, O.E., Li, L., Leitch, C.C. et al. (2004) Comparative genomics identifies a flagellar and basal body proteome that includes the BBS5 human disease gene. Cell, 117, 541-552.
-
(2004)
Cell
, vol.117
, pp. 541-552
-
-
Li, J.B.1
Gerdes, J.M.2
Haycraft, C.J.3
Fan, Y.4
Teslovich, T.M.5
May-Simera, H.6
Li, H.7
Blacque, O.E.8
Li, L.9
Leitch, C.C.10
-
70
-
-
19944430797
-
Genomic maps and comparative analysis of histone modifications in human and mouse
-
Bernstein, B.E., Kamal, M., Lindblad-Toh, K., Bekiranov, S., Bailey, D.K., Huebert, D.J., McMahon, S., Karlsson, E.K., Kulbokas, E.J. 3rd, Gingeras, T.R. et al. (2005) Genomic maps and comparative analysis of histone modifications in human and mouse. Cell, 120, 169-181.
-
(2005)
Cell
, vol.120
, pp. 169-181
-
-
Bernstein, B.E.1
Kamal, M.2
Lindblad-Toh, K.3
Bekiranov, S.4
Bailey, D.K.5
Huebert, D.J.6
McMahon, S.7
Karlsson, E.K.8
Kulbokas Iii, E.J.9
Gingeras, T.R.10
-
71
-
-
23744458086
-
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
-
Siepel, A., Bejerano, G., Pedersen, J.S., Hinrichs, A.S., Hou, M., Rosenbloom, K., Clawson, H., Spieth, J., Hillier, L.W., Richards, S. et al. (2005) Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Res., 15, 1034-1050.
-
(2005)
Genome Res
, vol.15
, pp. 1034-1050
-
-
Siepel, A.1
Bejerano, G.2
Pedersen, J.S.3
Hinrichs, A.S.4
Hou, M.5
Rosenbloom, K.6
Clawson, H.7
Spieth, J.8
Hillier, L.W.9
Richards, S.10
-
72
-
-
0031080378
-
Analysis of chromatin structure by in vivo formaldehyde cross-linking
-
Orlando, V., Strutt, H. and Paro, R. (1997) Analysis of chromatin structure by in vivo formaldehyde cross-linking. Methods, 11, 205-214.
-
(1997)
Methods
, vol.11
, pp. 205-214
-
-
Orlando, V.1
Strutt, H.2
Paro, R.3
-
74
-
-
84870288271
-
BART: Bayesian additive rgression trees
-
Chipman, H.A., George, E.I. and McCulloch, R.E. (2010) BART: Bayesian Additive Rgression Trees. Annu. Appl. Stat., 4, 266-298.
-
(2010)
Annu. Appl. Stat
, vol.4
, pp. 266-298
-
-
Chipman, H.A.1
George, E.I.2
McCulloch, R.E.3
-
75
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da, W., Sherman, B.T. and Lempicki, R.A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protocols, 4, 44-57.
-
(2009)
Nat. Protocols
, vol.4
, pp. 44-57
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
76
-
-
0036011243
-
A Delta-Notch signaling border regulated by Engrailed/Invected repression specifies boundary cells in the Drosophila hindgut
-
Iwaki, D.D. and Lengyel, J.A. (2002) A Delta-Notch signaling border regulated by Engrailed/Invected repression specifies boundary cells in the Drosophila hindgut. Mech. Dev., 114, 71-84.
-
(2002)
Mech. Dev
, vol.114
, pp. 71-84
-
-
Iwaki, D.D.1
Lengyel, J.A.2
-
77
-
-
18844448691
-
Racgap50C negatively regulates wingless pathway activity during drosophila embryonic development
-
Jones, W.M. and Bejsovec, A. (2005) RacGap50C negatively regulates wingless pathway activity during Drosophila embryonic development. Genetics, 169, 2075-2086.
-
(2005)
Genetics
, vol.169
, pp. 2075-2086
-
-
Jones, W.M.1
Bejsovec, A.2
-
78
-
-
0025848321
-
Isolation of a family of drosophila POU domain genes expressed in early development
-
Billin, A.N., Cockerill, K.A. and Poole, S.J. (1991) Isolation of a family of Drosophila POU domain genes expressed in early development. Mech. Dev., 34, 75-84.
-
(1991)
Mech. Dev
, vol.34
, pp. 75-84
-
-
Billin, A.N.1
Cockerill, K.A.2
Poole, S.J.3
-
79
-
-
0026337515
-
Characterization of two drosophila POU domain genes, related to oct-1 and oct-2, and the regulation of their expression patterns
-
Lloyd, A. and Sakonju, S. (1991) Characterization of two Drosophila POU domain genes, related to oct-1 and oct-2, and the regulation of their expression patterns. Mech. Dev., 36, 87-102.
-
(1991)
Mech. Dev
, vol.36
, pp. 87-102
-
-
Lloyd, A.1
Sakonju, S.2
-
80
-
-
0025901095
-
Two closely linked drosophila POU domain genes are expressed in neuroblasts and sensory elements
-
Dick, T., Yang, X.H., Yeo, S.L. and Chia, W. (1991) Two closely linked Drosophila POU domain genes are expressed in neuroblasts and sensory elements. Proc. Natl Acad. Sci. USA, 88, 7645-7649.
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 7645-7649
-
-
Dick, T.1
Yang, X.H.2
Yeo, S.L.3
Chia, W.4
-
81
-
-
0028942127
-
Conservation of complex expression domains of the pdm-2 POU domain gene between drosophila virilis and drosophila melanogaster
-
Poole, S.J. (1995) Conservation of complex expression domains of the pdm-2 POU domain gene between Drosophila virilis and Drosophila melanogaster. Mech. Dev., 49, 107-116.
-
(1995)
Mech. Dev
, vol.49
, pp. 107-116
-
-
Poole, S.J.1
-
82
-
-
0031443669
-
Dachshund and eyes absent proteins form a complex and function synergistically to induce ectopic eye development in drosophila
-
Chen, R., Amoui, M., Zhang, Z. and Mardon, G. (1997) Dachshund and eyes absent proteins form a complex and function synergistically to induce ectopic eye development in Drosophila. Cell, 91, 893-903.
-
(1997)
Cell
, vol.91
, pp. 893-903
-
-
Chen, R.1
Amoui, M.2
Zhang, Z.3
Mardon, G.4
-
83
-
-
0345471389
-
A conserved motif in goosecoid mediates groucho-dependent repression in Drosophila embryos
-
Jimenez, G., Verrijzer, C.P. and Ish-Horowicz, D. (1999) A conserved motif in goosecoid mediates groucho-dependent repression in Drosophila embryos. Mol. Cell. Biol., 19, 2080-2087.
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 2080-2087
-
-
Jimenez, G.1
Verrijzer, C.P.2
Ish-Horowicz, D.3
-
84
-
-
34249000198
-
Tailup, a LIM-HD gene, and iro-c cooperate in drosophila dorsal mesothorax specification
-
de Navascues, J. and Modolell, J. (2007) tailup, a LIM-HD gene, and Iro-C cooperate in Drosophila dorsal mesothorax specification. Development, 134, 1779-1788.
-
(2007)
Development
, vol.134
, pp. 1779-1788
-
-
De Navascues, J.1
Modolell, J.2
-
85
-
-
62349131520
-
The drosophila homolog of vertebrate islet1 is a key component in early cardiogenesis
-
Mann, T., Bodmer, R. and Pandur, P. (2009) The Drosophila homolog of vertebrate Islet1 is a key component in early cardiogenesis. Development, 136, 317-326.
-
(2009)
Development
, vol.136
, pp. 317-326
-
-
Mann, T.1
Bodmer, R.2
Pandur, P.3
-
86
-
-
25844432119
-
Wnt signalling regulates adult hippocampal neurogenesis
-
Lie, D.C., Colamarino, S.A., Song, H.J., Desire, L., Mira, H., Consiglio, A., Lein, E.S., Jessberger, S., Lansford, H., Dearie, A.R. et al. (2005) Wnt signalling regulates adult hippocampal neurogenesis. Nature, 437, 1370-1375.
-
(2005)
Nature
, vol.437
, pp. 1370-1375
-
-
Lie, D.C.1
Colamarino, S.A.2
Song, H.J.3
Desire, L.4
Mira, H.5
Consiglio, A.6
Lein, E.S.7
Jessberger, S.8
Lansford, H.9
Dearie, A.R.10
-
87
-
-
0030657920
-
The polycomb group protein complex of drosophila melanogaster has different compositions at different target genes
-
Strutt, H. and Paro, R. (1997) The polycomb group protein complex of Drosophila melanogaster has different compositions at different target genes. Mol. Cell. Biol., 17, 6773-6783.
-
(1997)
Mol. Cell. Biol
, vol.17
, pp. 6773-6783
-
-
Strutt, H.1
Paro, R.2
-
88
-
-
33749325080
-
Genomic evolution of hox gene clusters
-
Lemons, D. and McGinnis, W. (2006) Genomic evolution of Hox gene clusters. Science, 313, 1918-1922.
-
(2006)
Science
, vol.313
, pp. 1918-1922
-
-
Lemons, D.1
McGinnis, W.2
-
89
-
-
33845452031
-
Transcription of bxd noncoding RNAs promoted by trithorax represses Ubx in cis by transcriptional interference
-
Petruk, S., Sedkov, Y., Riley, K.M., Hodgson, J., Schweisguth, F., Hirose, S., Jaynes, J.B., Brock, H.W. and Mazo, A. (2006) Transcription of bxd noncoding RNAs promoted by trithorax represses Ubx in cis by transcriptional interference. Cell, 127, 1209-1221.
-
(2006)
Cell
, vol.127
, pp. 1209-1221
-
-
Petruk, S.1
Sedkov, Y.2
Riley, K.M.3
Hodgson, J.4
Schweisguth, F.5
Hirose, S.6
Jaynes, J.B.7
Brock, H.W.8
Mazo, A.9
-
90
-
-
52049092352
-
The drosophila gap gene giant has an anterior segment identity function mediated through disconnected and teashirt
-
Sanders, L.R., Patel, M. and Mahaffey, J.W. (2008) The Drosophila gap gene giant has an anterior segment identity function mediated through disconnected and teashirt. Genetics, 179, 441-453.
-
(2008)
Genetics
, vol.179
, pp. 441-453
-
-
Sanders, L.R.1
Patel, M.2
Mahaffey, J.W.3
-
91
-
-
0026287693
-
Identification of target genes of the homeotic gene antennapedia by enhancer detection
-
Wagner-Bernholz, J.T., Wilson, C., Gibson, G., Schuh, R. and Gehring, W.J. (1991) Identification of target genes of the homeotic gene Antennapedia by enhancer detection. Genes Dev., 5, 2467-2480.
-
(1991)
Genes Dev
, vol.5
, pp. 2467-2480
-
-
Wagner-Bernholz, J.T.1
Wilson, C.2
Gibson, G.3
Schuh, R.4
Gehring, W.J.5
-
92
-
-
0024967223
-
A purified drosophila homeodomain protein represses transcription in vitro
-
Biggin, M.D. and Tjian, R. (1989) A purified Drosophila homeodomain protein represses transcription in vitro. Cell, 58, 433-440.
-
(1989)
Cell
, vol.58
, pp. 433-440
-
-
Biggin, M.D.1
Tjian, R.2
-
93
-
-
49549112519
-
The regulation and evolution of a genetic switch controlling sexually dimorphic traits in drosophila
-
Williams, T.M., Selegue, J.E., Werner, T., Gompel, N., Kopp, A. and Carroll, S.B. (2008) The regulation and evolution of a genetic switch controlling sexually dimorphic traits in Drosophila. Cell, 134, 610-623.
-
(2008)
Cell
, vol.134
, pp. 610-623
-
-
Williams, T.M.1
Selegue, J.E.2
Werner, T.3
Gompel, N.4
Kopp, A.5
Carroll, S.B.6
-
94
-
-
17044458309
-
A novel Drosophila paired-like homeobox gene related to Caenorhabditis elegans unc-4 is expressed in subsets of postmitotic neurons and epidermal cells
-
Tabuchi, K., Yoshikawa, S., Yuasa, Y., Sawamoto, K. and Okano, H. (1998) A novel Drosophila paired-like homeobox gene related to Caenorhabditis elegans unc-4 is expressed in subsets of postmitotic neurons and epidermal cells. Neurosci. Lett., 257, 49-52.
-
(1998)
Neurosci. Lett
, vol.257
, pp. 49-52
-
-
Tabuchi, K.1
Yoshikawa, S.2
Yuasa, Y.3
Sawamoto, K.4
Okano, H.5
-
95
-
-
0346258163
-
Initial state of the drosophila eye before dorsoventral specification is equivalent to ventral
-
Singh, A. and Choi, K.W. (2003) Initial state of the Drosophila eye before dorsoventral specification is equivalent to ventral. Development, 130, 6351-6360.
-
(2003)
Development
, vol.130
, pp. 6351-6360
-
-
Singh, A.1
Choi, K.W.2
-
96
-
-
33846238428
-
Growth control in the proliferative region of the drosophila eye-head primordium: The elbow-noc gene complex
-
Luque, C.M. and Milan, M. (2007) Growth control in the proliferative region of the Drosophila eye-head primordium: the elbow-noc gene complex. Dev. Biol., 301, 327-339.
-
(2007)
Dev. Biol
, vol.301
, pp. 327-339
-
-
Luque, C.M.1
Milan, M.2
-
97
-
-
0028789324
-
Expression of a drosophila GATA transcription factor in multiple tissues in the developing embryos. Identification of homozygous lethal mutants with P-element insertion at the promoter region
-
Lin, W.H., Huang, L.H., Yeh, J.Y., Hoheisel, J., Lehrach, H., Sun, Y.H. and Tsai, S.F. (1995) Expression of a Drosophila GATA transcription factor in multiple tissues in the developing embryos. Identification of homozygous lethal mutants with P-element insertion at the promoter region. J. Biol. Chem., 270, 25150-25158.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 25150-25158
-
-
Lin, W.H.1
Huang, L.H.2
Yeh, J.Y.3
Hoheisel, J.4
Lehrach, H.5
Sun, Y.H.6
Tsai, S.F.7
-
98
-
-
33750492939
-
GATA factors participate in tissue-specific immune responses in drosophila larvae
-
Senger, K., Harris, K. and Levine, M. (2006) GATA factors participate in tissue-specific immune responses in Drosophila larvae. Proc. Natl Acad. Sci. USA, 103, 15957-15962.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 15957-15962
-
-
Senger, K.1
Harris, K.2
Levine, M.3
-
99
-
-
0025766132
-
The embryonic expression patterns of zfh-1 and zfh-2, two drosophila genes encoding novel zinc-finger homeodomain proteins
-
Lai, Z.C., Fortini, M.E. and Rubin, G.M. (1991) The embryonic expression patterns of zfh-1 and zfh-2, two Drosophila genes encoding novel zinc-finger homeodomain proteins. Mech. Dev., 34, 123-134.
-
(1991)
Mech. Dev
, vol.34
, pp. 123-134
-
-
Lai, Z.C.1
Fortini, M.E.2
Rubin, G.M.3
-
100
-
-
32044432568
-
Transposon-free regions in mammalian genomes
-
Simons, C., Pheasant, M., Makunin, I.V. and Mattick, J.S. (2006) Transposon-free regions in mammalian genomes. Genome Res., 16, 164-172.
-
(2006)
Genome Res
, vol.16
, pp. 164-172
-
-
Simons, C.1
Pheasant, M.2
Makunin, I.V.3
Mattick, J.S.4
-
101
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein, B.E., Mikkelsen, T.S., Xie, X., Kamal, M., Huebert, D.J., Cuff, J., Fry, B., Meissner, A., Wernig, M., Plath, K. et al. (2006) A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell, 125, 315-326.
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
-
102
-
-
70149103623
-
CHD3 proteins and polycomb group proteins antagonistically determine cell identity in arabidopsis
-
Aichinger, E., Villar, C.B., Farrona, S., Reyes, J.C., Hennig, L. and Kohler, C. (2009) CHD3 proteins and polycomb group proteins antagonistically determine cell identity in Arabidopsis. PLoS Genet., 5, e1000605.
-
(2009)
PLoS Genet
, vol.5
-
-
Aichinger, E.1
Villar, C.B.2
Farrona, S.3
Reyes, J.C.4
Hennig, L.5
Kohler, C.6
-
103
-
-
76749164914
-
Alternative epigenetic chromatin states of polycomb target genes
-
Schwartz, Y.B., Kahn, T.G., Stenberg, P., Ohno, K., Bourgon, R. and Pirrotta, V. (2010) Alternative epigenetic chromatin states of polycomb target genes. PLoS Genet., 6, e1000805.
-
(2010)
PLoS Genet
, vol.6
-
-
Schwartz, Y.B.1
Kahn, T.G.2
Stenberg, P.3
Ohno, K.4
Bourgon, R.5
Pirrotta, V.6
-
104
-
-
77954383036
-
Vertebrate homologue of drosophila GAGA factor
-
Matharu, N.K., Hussain, T., Sankaranarayanan, R. and Mishra, R.K. (2010) Vertebrate homologue of Drosophila GAGA factor. J. Mol. Biol., 400, 434-437.
-
(2010)
J. Mol. Biol
, vol.400
, pp. 434-437
-
-
Matharu, N.K.1
Hussain, T.2
Sankaranarayanan, R.3
Mishra, R.K.4
-
105
-
-
72749127435
-
The origin and behavior of mutable loci in maize
-
McClintock, B. (1950) The origin and behavior of mutable loci in maize. Proc. Natl Acad. Sci. USA, 36, 344-355.
-
(1950)
Proc. Natl Acad. Sci. USA
, vol.36
, pp. 344-355
-
-
McClintock, B.1
|