-
1
-
-
64849104716
-
Pulsatile stimulation determines timing and specificity of NF-kappaB-dependent transcription
-
Ashall L., Horton C.A., Nelson D.E., Paszek P., Harper C.V., Sillitoe K., Ryan S., Spiller D.G., Unitt J.F., Broomhead D.S., Kell D.B., Rand D.A., See V., White M.R. Pulsatile stimulation determines timing and specificity of NF-kappaB-dependent transcription. Science 2009, 324:242.
-
(2009)
Science
, vol.324
, pp. 242
-
-
Ashall, L.1
Horton, C.A.2
Nelson, D.E.3
Paszek, P.4
Harper, C.V.5
Sillitoe, K.6
Ryan, S.7
Spiller, D.G.8
Unitt, J.F.9
Broomhead, D.S.10
Kell, D.B.11
Rand, D.A.12
See, V.13
White, M.R.14
-
2
-
-
4444256936
-
Segmentation in vertebrates: clock and gradient finally joined
-
Aulehla A., Herrmann B.G. Segmentation in vertebrates: clock and gradient finally joined. Genes Dev. 2004, 18:2060.
-
(2004)
Genes Dev.
, vol.18
, pp. 2060
-
-
Aulehla, A.1
Herrmann, B.G.2
-
3
-
-
56949089071
-
Oscillating signaling pathways during embryonic development
-
Aulehla A., Pourquie O. Oscillating signaling pathways during embryonic development. Curr. Opin. Cell Biol. 2008, 20:632.
-
(2008)
Curr. Opin. Cell Biol.
, vol.20
, pp. 632
-
-
Aulehla, A.1
Pourquie, O.2
-
4
-
-
0034730493
-
Resetting of circadian time in peripheral tissues by glucocorticoid signaling
-
Balsalobre A., Brown S.A., Marcacci L., Tronche F., Kellendonk C., Reichardt H.M., Schutz G., Schibler U. Resetting of circadian time in peripheral tissues by glucocorticoid signaling. Science 2000, 289:2344.
-
(2000)
Science
, vol.289
, pp. 2344
-
-
Balsalobre, A.1
Brown, S.A.2
Marcacci, L.3
Tronche, F.4
Kellendonk, C.5
Reichardt, H.M.6
Schutz, G.7
Schibler, U.8
-
5
-
-
78649687209
-
Circadian integration of metabolism and energetics
-
Bass J., Takahashi J.S. Circadian integration of metabolism and energetics. Science 2010, 330:1349.
-
(2010)
Science
, vol.330
, pp. 1349
-
-
Bass, J.1
Takahashi, J.S.2
-
6
-
-
42949171936
-
Recurrent initiation: a mechanism for triggering p53 pulses in response to DNA damage
-
Batchelor E., Mock C.S., Bhan I., Loewer A., Lahav G. Recurrent initiation: a mechanism for triggering p53 pulses in response to DNA damage. Mol. Cell 2008, 30:277.
-
(2008)
Mol. Cell
, vol.30
, pp. 277
-
-
Batchelor, E.1
Mock, C.S.2
Bhan, I.3
Loewer, A.4
Lahav, G.5
-
7
-
-
0013537360
-
Dynamic behavior of transcription factors on a natural promoter in living cells
-
Becker M., Baumann C.T., John S., Walker D., Vigneron M., McNally J.G., Hager G.L. Dynamic behavior of transcription factors on a natural promoter in living cells. EMBO Rep. 2002, 3:1188.
-
(2002)
EMBO Rep.
, vol.3
, pp. 1188
-
-
Becker, M.1
Baumann, C.T.2
John, S.3
Walker, D.4
Vigneron, M.5
McNally, J.G.6
Hager, G.L.7
-
8
-
-
0018168286
-
Hypophysial responses to continuous and intermittent delivery of hypopthalamic gonadotropin-releasing hormone
-
Belchetz P.E., Plant T.M., Nakai Y., Keogh E.J., Knobil E. Hypophysial responses to continuous and intermittent delivery of hypopthalamic gonadotropin-releasing hormone. Science 1978, 202:631.
-
(1978)
Science
, vol.202
, pp. 631
-
-
Belchetz, P.E.1
Plant, T.M.2
Nakai, Y.3
Keogh, E.J.4
Knobil, E.5
-
9
-
-
50649120833
-
Metabolic gene regulation in a dynamically changing environment
-
Bennett M.R., Pang W.L., Ostroff N.A., Baumgartner B.L., Nayak S., Tsimring L.S., Hasty J. Metabolic gene regulation in a dynamically changing environment. Nature 2008, 454:1119.
-
(2008)
Nature
, vol.454
, pp. 1119
-
-
Bennett, M.R.1
Pang, W.L.2
Ostroff, N.A.3
Baumgartner, B.L.4
Nayak, S.5
Tsimring, L.S.6
Hasty, J.7
-
10
-
-
0038046204
-
Periodic repression by the bHLH factor Hes7 is an essential mechanism for the somite segmentation clock
-
Bessho Y., Hirata H., Masamizu Y., Kageyama R. Periodic repression by the bHLH factor Hes7 is an essential mechanism for the somite segmentation clock. Genes Dev. 2003, 17:1451.
-
(2003)
Genes Dev.
, vol.17
, pp. 1451
-
-
Bessho, Y.1
Hirata, H.2
Masamizu, Y.3
Kageyama, R.4
-
11
-
-
0028940587
-
Gene number, noise reduction and biological complexity
-
Bird A.P. Gene number, noise reduction and biological complexity. Trends Genet. 1995, 11:94.
-
(1995)
Trends Genet.
, vol.11
, pp. 94
-
-
Bird, A.P.1
-
12
-
-
0242416539
-
Noise in eukaryotic gene expression
-
Blake W.J., Kaern M., Cantor C.R., Collins J.J. Noise in eukaryotic gene expression. Nature 2003, 422:633.
-
(2003)
Nature
, vol.422
, pp. 633
-
-
Blake, W.J.1
Kaern, M.2
Cantor, C.R.3
Collins, J.J.4
-
13
-
-
35548988487
-
The transcriptional cycle of HIV-1 in real-time and live cells
-
Boireau S., Maiuri P., Basyuk E., de la M.M., Knezevich A., Pradet-Balade B., Backer V., Kornblihtt A., Marcello A., Bertrand E. The transcriptional cycle of HIV-1 in real-time and live cells. J. Cell Biol. 2007, 179:291.
-
(2007)
J. Cell Biol.
, vol.179
, pp. 291
-
-
Boireau, S.1
Maiuri, P.2
Basyuk, E.3
de la, M.M.4
Knezevich, A.5
Pradet-Balade, B.6
Backer, V.7
Kornblihtt, A.8
Marcello, A.9
Bertrand, E.10
-
14
-
-
33644530060
-
A hyper-dynamic equilibrium between promoter-bound and nucleoplasmic dimers controls NF-κB-dependent gene activity
-
Bosisio D., Marazzi I., Agresti A., Shimizu N., Bianchi M.E., Natoli G. A hyper-dynamic equilibrium between promoter-bound and nucleoplasmic dimers controls NF-κB-dependent gene activity. EMBO J. 2006, 25:798.
-
(2006)
EMBO J.
, vol.25
, pp. 798
-
-
Bosisio, D.1
Marazzi, I.2
Agresti, A.3
Shimizu, N.4
Bianchi, M.E.5
Natoli, G.6
-
15
-
-
38649099445
-
High-resolution mapping and characterization of open chromatin across the genome
-
Boyle A.P., Davis S., Shulha H.P., Meltzer P., Margulies E.H., Weng Z., Furey T.S., Crawford G.E. High-resolution mapping and characterization of open chromatin across the genome. Cell 2008, 132:311.
-
(2008)
Cell
, vol.132
, pp. 311
-
-
Boyle, A.P.1
Davis, S.2
Shulha, H.P.3
Meltzer, P.4
Margulies, E.H.5
Weng, Z.6
Furey, T.S.7
Crawford, G.E.8
-
16
-
-
52949098296
-
Frequency-modulated nuclear localization bursts coordinate gene regulation
-
Cai L., Dalal C.K., Elowitz M.B. Frequency-modulated nuclear localization bursts coordinate gene regulation. Nature 2008, 455:485.
-
(2008)
Nature
, vol.455
, pp. 485
-
-
Cai, L.1
Dalal, C.K.2
Elowitz, M.B.3
-
18
-
-
33646591544
-
Transcriptional pulsing of a developmental gene
-
Chubb J.R., Trcek T., Shenoy S.M., Singer R.H. Transcriptional pulsing of a developmental gene. Curr. Biol. 2006, 16:1018.
-
(2006)
Curr. Biol.
, vol.16
, pp. 1018
-
-
Chubb, J.R.1
Trcek, T.2
Shenoy, S.M.3
Singer, R.H.4
-
19
-
-
79952480945
-
Adrenal peripheral oscillator in generating the circadian glucocorticoid rhythm
-
Chung S., Son G.H., Kim K. Adrenal peripheral oscillator in generating the circadian glucocorticoid rhythm. Ann. N. Y. Acad. Sci. 2011, 1220:71.
-
(2011)
Ann. N. Y. Acad. Sci.
, vol.1220
, pp. 71
-
-
Chung, S.1
Son, G.H.2
Kim, K.3
-
20
-
-
71149092283
-
Dynamics and variability of ERK2 response to EGF in individual living cells
-
Cohen-Saidon C., Cohen A.A., Sigal A., Liron Y., Alon U. Dynamics and variability of ERK2 response to EGF in individual living cells. Mol. Cell 2009, 36:885.
-
(2009)
Mol. Cell
, vol.36
, pp. 885
-
-
Cohen-Saidon, C.1
Cohen, A.A.2
Sigal, A.3
Liron, Y.4
Alon, U.5
-
21
-
-
77949523739
-
On the spontaneous stochastic dynamics of a single gene: complexity of the molecular interplay at the promoter
-
Coulon A., Gandrillon O., Beslon G. On the spontaneous stochastic dynamics of a single gene: complexity of the molecular interplay at the promoter. BMC Syst. Biol. 2010, 4:2.
-
(2010)
BMC Syst. Biol.
, vol.4
, pp. 2
-
-
Coulon, A.1
Gandrillon, O.2
Beslon, G.3
-
22
-
-
34548507690
-
In vivo dynamics of RNA polymerase II transcription
-
Darzacq X., Shav-Tal Y., de Turris V., Brody Y., Shenoy S.M., Phair R.D., Singer R.H. In vivo dynamics of RNA polymerase II transcription. Nat. Struct. Mol. Biol. 2007, 14:796.
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 796
-
-
Darzacq, X.1
Shav-Tal, Y.2
de Turris, V.3
Brody, Y.4
Shenoy, S.M.5
Phair, R.D.6
Singer, R.H.7
-
23
-
-
0034111154
-
Role of molecular chaperones in subnuclear trafficking of glucocorticoid receptors
-
DeFranco D.B. Role of molecular chaperones in subnuclear trafficking of glucocorticoid receptors. Kidney Int. 2000, 57:1241.
-
(2000)
Kidney Int.
, vol.57
, pp. 1241
-
-
DeFranco, D.B.1
-
24
-
-
16744363736
-
Steroid receptor and molecular chaperone encounters in the nucleus
-
e1-file
-
DeFranco D.B., Csermely P. Steroid receptor and molecular chaperone encounters in the nucleus. Sci. STKE 2000, 2000. e1-file.
-
(2000)
Sci. STKE
, vol.2000
-
-
DeFranco, D.B.1
Csermely, P.2
-
25
-
-
33845444174
-
A complex oscillating network of signaling genes underlies the mouse segmentation clock
-
Dequeant M.L., Glynn E., Gaudenz K., Wahl M., Chen J., Mushegian A., Pourquie O. A complex oscillating network of signaling genes underlies the mouse segmentation clock. Science 2006, 314:1595.
-
(2006)
Science
, vol.314
, pp. 1595
-
-
Dequeant, M.L.1
Glynn, E.2
Gaudenz, K.3
Wahl, M.4
Chen, J.5
Mushegian, A.6
Pourquie, O.7
-
26
-
-
78149414479
-
Glucocorticoids and circadian clock control of cell proliferation: at the interface between three dynamic systems
-
Dickmeis T., Foulkes N.S. Glucocorticoids and circadian clock control of cell proliferation: at the interface between three dynamic systems. Mol. Cell. Endocrinol. 2011, 331:11.
-
(2011)
Mol. Cell. Endocrinol.
, vol.331
, pp. 11
-
-
Dickmeis, T.1
Foulkes, N.S.2
-
27
-
-
0032580202
-
Calcium oscillations increase the efficiency and specificity of gene expression
-
Dolmetsch R.E., Xu K., Lewis R.S. Calcium oscillations increase the efficiency and specificity of gene expression. Nature 1998, 392:933.
-
(1998)
Nature
, vol.392
, pp. 933
-
-
Dolmetsch, R.E.1
Xu, K.2
Lewis, R.S.3
-
28
-
-
46349100551
-
Corticosterone levels in the brain show a distinct ultradian rhythm but a delayed response to forced swim stress
-
Droste S.K., de Groote L., Atkinson H.C., Lightman S.L., Reul J.M., Linthorst A.C. Corticosterone levels in the brain show a distinct ultradian rhythm but a delayed response to forced swim stress. Endocrinology 2008, 149:3244.
-
(2008)
Endocrinology
, vol.149
, pp. 3244
-
-
Droste, S.K.1
de Groote, L.2
Atkinson, H.C.3
Lightman, S.L.4
Reul, J.M.5
Linthorst, A.C.6
-
29
-
-
2242433534
-
A kinetic framework for a mammalian RNA polymerase in vivo
-
Dundr M., Hoffmann-Rohrer U., Hu Q., Grummt I., Rothblum L.I., Phair R.D., Misteli T. A kinetic framework for a mammalian RNA polymerase in vivo. Science 2002, 298:1623.
-
(2002)
Science
, vol.298
, pp. 1623
-
-
Dundr, M.1
Hoffmann-Rohrer, U.2
Hu, Q.3
Grummt, I.4
Rothblum, L.I.5
Phair, R.D.6
Misteli, T.7
-
30
-
-
56749102636
-
Regulatory activity revealed by dynamic correlations in gene expression noise
-
Dunlop M.J., Cox R.S., Levine J.H., Murray R.M., Elowitz M.B. Regulatory activity revealed by dynamic correlations in gene expression noise. Nat. Genet. 2008, 40:1493.
-
(2008)
Nat. Genet.
, vol.40
, pp. 1493
-
-
Dunlop, M.J.1
Cox, R.S.2
Levine, J.H.3
Murray, R.M.4
Elowitz, M.B.5
-
31
-
-
0018581798
-
Age- and sex-related differences in episodic growth hormone secretion in the rat
-
Eden S. Age- and sex-related differences in episodic growth hormone secretion in the rat. Endocrinology 1979, 105:555.
-
(1979)
Endocrinology
, vol.105
, pp. 555
-
-
Eden, S.1
-
32
-
-
1542267822
-
Molecular chaperones function as steroid receptor nuclear mobility factors
-
Elbi C., Walker D.A., Romero G., Sullivan W.P., Toft D.O., Hager G.L., DeFranco D.B. Molecular chaperones function as steroid receptor nuclear mobility factors. Proc. Natl. Acad. Sci. U. S. A. 2004, 101:2876.
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 2876
-
-
Elbi, C.1
Walker, D.A.2
Romero, G.3
Sullivan, W.P.4
Toft, D.O.5
Hager, G.L.6
DeFranco, D.B.7
-
33
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz M.B., Levine A.J., Siggia E.D., Swain P.S. Stochastic gene expression in a single cell. Science 2002, 297:1183.
-
(2002)
Science
, vol.297
, pp. 1183
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
34
-
-
27144466425
-
Antiandrogens prevent stable DNA-binding of the androgen receptor
-
Farla P., Hersmus R., Trapman J., Houtsmuller A.B. Antiandrogens prevent stable DNA-binding of the androgen receptor. J. Cell Sci. 2005, 118:4187.
-
(2005)
J. Cell Sci.
, vol.118
, pp. 4187
-
-
Farla, P.1
Hersmus, R.2
Trapman, J.3
Houtsmuller, A.B.4
-
35
-
-
33846132939
-
The role of the proteasomal ATPases and activator monoubiquitylation in regulating Gal4 binding to promoters
-
Ferdous A., Sikder D., Gillette T., Nalley K., Kodadek T., Johnston S.A. The role of the proteasomal ATPases and activator monoubiquitylation in regulating Gal4 binding to promoters. Genes Dev. 2007, 21:112.
-
(2007)
Genes Dev.
, vol.21
, pp. 112
-
-
Ferdous, A.1
Sikder, D.2
Gillette, T.3
Nalley, K.4
Kodadek, T.5
Johnston, S.A.6
-
36
-
-
0015431771
-
Age-related change in the twenty-four-hour spontaneous secretion of growth hormone
-
Finkelstein J.W., Roffwarg H.P., Boyar R.M., Kream J., Hellman L. Age-related change in the twenty-four-hour spontaneous secretion of growth hormone. J. Clin. Endocrinol. Metab. 1972, 35:665.
-
(1972)
J. Clin. Endocrinol. Metab.
, vol.35
, pp. 665
-
-
Finkelstein, J.W.1
Roffwarg, H.P.2
Boyar, R.M.3
Kream, J.4
Hellman, L.5
-
37
-
-
0036240034
-
ATP-dependent mobilization of the glucocorticoid receptor during chromatin remodeling
-
Fletcher T.M., Xiao N., Mautino G., Baumann C.T., Wolford R.G., Warren B.S., Hager G.L. ATP-dependent mobilization of the glucocorticoid receptor during chromatin remodeling. Mol. Cell. Biol. 2002, 22:3255.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 3255
-
-
Fletcher, T.M.1
Xiao, N.2
Mautino, G.3
Baumann, C.T.4
Wolford, R.G.5
Warren, B.S.6
Hager, G.L.7
-
38
-
-
0037150683
-
Disassembly of transcriptional regulatory complexes by molecular chaperones
-
Freeman B.C., Yamamoto K.R. Disassembly of transcriptional regulatory complexes by molecular chaperones. Science 2002, 296:2232.
-
(2002)
Science
, vol.296
, pp. 2232
-
-
Freeman, B.C.1
Yamamoto, K.R.2
-
39
-
-
78650967225
-
Transcription of functionally related constitutive genes is not coordinated
-
Gandhi S.J., Zenklusen D., Lionnet T., Singer R.H. Transcription of functionally related constitutive genes is not coordinated. Nat. Struct. Mol. Biol. 2011, 18:27.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 27
-
-
Gandhi, S.J.1
Zenklusen, D.2
Lionnet, T.3
Singer, R.H.4
-
40
-
-
33745451921
-
Oscillations and variability in the p53 system
-
Geva-Zatorsky N., Rosenfeld N., Itzkovitz S., Milo R., Sigal A., Dekel E., Yarnitzky T., Liron Y., Polak P., Lahav G., Alon U. Oscillations and variability in the p53 system. Mol. Syst. Biol. 2006, 2:2006.
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 2006
-
-
Geva-Zatorsky, N.1
Rosenfeld, N.2
Itzkovitz, S.3
Milo, R.4
Sigal, A.5
Dekel, E.6
Yarnitzky, T.7
Liron, Y.8
Polak, P.9
Lahav, G.10
Alon, U.11
-
41
-
-
33646568466
-
Eukaryotic transcription: what does it mean for a gene to be 'on'?
-
Golding I., Cox E.C. Eukaryotic transcription: what does it mean for a gene to be 'on'?. Curr. Biol. 2006, 16:R371-R373.
-
(2006)
Curr. Biol.
, vol.16
-
-
Golding, I.1
Cox, E.C.2
-
42
-
-
28944434119
-
Real-time kinetics of gene activity in individual bacteria
-
Golding I., Paulsson J., Zawilski S.M., Cox E.C. Real-time kinetics of gene activity in individual bacteria. Cell 2005, 123:1025.
-
(2005)
Cell
, vol.123
, pp. 1025
-
-
Golding, I.1
Paulsson, J.2
Zawilski, S.M.3
Cox, E.C.4
-
44
-
-
43449111772
-
Modulation of RNA polymerase assembly dynamics in transcriptional regulation
-
Gorski S.A., Snyder S.K., John S., Grummt I., Misteli T. Modulation of RNA polymerase assembly dynamics in transcriptional regulation. Mol. Cell 2008, 30:486.
-
(2008)
Mol. Cell
, vol.30
, pp. 486
-
-
Gorski, S.A.1
Snyder, S.K.2
John, S.3
Grummt, I.4
Misteli, T.5
-
45
-
-
73749085370
-
Epigenetic factors in aging and longevity
-
Gravina S., Vijg J. Epigenetic factors in aging and longevity. Pflugers Arch. 2010, 459:247.
-
(2010)
Pflugers Arch.
, vol.459
, pp. 247
-
-
Gravina, S.1
Vijg, J.2
-
47
-
-
84861910115
-
Anabolic effects of intermittent PTH on osteoblasts
-
Greenfield E.M. Anabolic effects of intermittent PTH on osteoblasts. Curr. Mol. Pharmacol. 2011.
-
(2011)
Curr. Mol. Pharmacol.
-
-
Greenfield, E.M.1
-
48
-
-
84875636238
-
Impact of chromatin structure on PR signaling: Transition from local to global analysis
-
(in press).
-
L. Grontved, G.L. Hager, Impact of chromatin structure on PR signaling: Transition from local to global analysis, Mol. Cell. Endocrinol. (in press).
-
Mol. Cell. Endocrinol.
-
-
Grontved, L.1
Hager, G.L.2
-
51
-
-
79955569948
-
Diverse gene reprogramming events occur in the same spatial clusters of distal regulatory elements
-
Hakim O., Sung M.H., Voss T.C., John S., Splinter E., Sabo P.J., Thurman R.E., Stamatoyannopoulos J.A., de Laat W., Hager G.L. Diverse gene reprogramming events occur in the same spatial clusters of distal regulatory elements. Genome Res. 2011, 21:697.
-
(2011)
Genome Res.
, vol.21
, pp. 697
-
-
Hakim, O.1
Sung, M.H.2
Voss, T.C.3
John, S.4
Splinter, E.5
Sabo, P.J.6
Thurman, R.E.7
Stamatoyannopoulos, J.A.8
de Laat, W.9
Hager, G.L.10
-
52
-
-
79955488304
-
Dynamic analysis of stochastic transcription cycles
-
Harper C.V., Finkenstadt B., Woodcock D.J., Friedrichsen S., Semprini S., Ashall L., Spiller D.G., Mullins J.J., Rand D.A., Davis J.R., White M.R. Dynamic analysis of stochastic transcription cycles. PLoS Biol. 2011, 9:e1000607.
-
(2011)
PLoS Biol.
, vol.9
-
-
Harper, C.V.1
Finkenstadt, B.2
Woodcock, D.J.3
Friedrichsen, S.4
Semprini, S.5
Ashall, L.6
Spiller, D.G.7
Mullins, J.J.8
Rand, D.A.9
Davis, J.R.10
White, M.R.11
-
53
-
-
34948859016
-
Chronobiology in the endocrine system
-
Haus E. Chronobiology in the endocrine system. Adv. Drug Deliv. Rev. 2007, 59:985.
-
(2007)
Adv. Drug Deliv. Rev.
, vol.59
, pp. 985
-
-
Haus, E.1
-
54
-
-
0032863948
-
Biologic rhythms in the immune system
-
Haus E., Smolensky M.H. Biologic rhythms in the immune system. Chronobiol. Int. 1999, 16:581.
-
(1999)
Chronobiol. Int.
, vol.16
, pp. 581
-
-
Haus, E.1
Smolensky, M.H.2
-
55
-
-
63849308888
-
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
-
Hesselberth J.R., Zhang Z., Sabo P.J., Chen X., Sandstrom R., Reynolds A.P., Thurman R.E., Neph S., Kuehn M.S., Noble W.S., Fields S., Stamatoyannopoulos J.A. Global mapping of protein-DNA interactions in vivo by digital genomic footprinting. Nat. Methods 2009, 6:283.
-
(2009)
Nat. Methods
, vol.6
, pp. 283
-
-
Hesselberth, J.R.1
Zhang, Z.2
Sabo, P.J.3
Chen, X.4
Sandstrom, R.5
Reynolds, A.P.6
Thurman, R.E.7
Neph, S.8
Kuehn, M.S.9
Noble, W.S.10
Fields, S.11
Stamatoyannopoulos, J.A.12
-
56
-
-
79961051673
-
Separating intrinsic from extrinsic fluctuations in dynamic biological systems
-
Hilfinger A., Paulsson J. Separating intrinsic from extrinsic fluctuations in dynamic biological systems. Proc. Natl. Acad. Sci. U. S. A. 2011, 108:12167.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 12167
-
-
Hilfinger, A.1
Paulsson, J.2
-
57
-
-
33745747107
-
The DNA binding activity of p53 displays reaction-diffusion kinetics
-
Hinow P., Rogers C.E., Barbieri C.E., Pietenpol J.A., Kenworthy A.K., DiBenedetto E. The DNA binding activity of p53 displays reaction-diffusion kinetics. Biophys. J. 2006, 91:330.
-
(2006)
Biophys. J.
, vol.91
, pp. 330
-
-
Hinow, P.1
Rogers, C.E.2
Barbieri, C.E.3
Pietenpol, J.A.4
Kenworthy, A.K.5
DiBenedetto, E.6
-
58
-
-
3042842911
-
Instability of Hes7 protein is crucial for the somite segmentation clock
-
Hirata H., Bessho Y., Kokubu H., Masamizu Y., Yamada S., Lewis J., Kageyama R. Instability of Hes7 protein is crucial for the somite segmentation clock. Nat. Genet. 2004, 36:750.
-
(2004)
Nat. Genet.
, vol.36
, pp. 750
-
-
Hirata, H.1
Bessho, Y.2
Kokubu, H.3
Masamizu, Y.4
Yamada, S.5
Lewis, J.6
Kageyama, R.7
-
59
-
-
0037174669
-
Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop
-
Hirata H., Yoshiura S., Ohtsuka T., Bessho Y., Harada T., Yoshikawa K., Kageyama R. Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop. Science 2002, 298:840.
-
(2002)
Science
, vol.298
, pp. 840
-
-
Hirata, H.1
Yoshiura, S.2
Ohtsuka, T.3
Bessho, Y.4
Harada, T.5
Yoshikawa, K.6
Kageyama, R.7
-
60
-
-
0037044575
-
The IkappaB-NF-kappaB signaling module: temporal control and selective gene activation
-
Hoffmann A., Levchenko A., Scott M.L., Baltimore D. The IkappaB-NF-kappaB signaling module: temporal control and selective gene activation. Science 2002, 298:1241.
-
(2002)
Science
, vol.298
, pp. 1241
-
-
Hoffmann, A.1
Levchenko, A.2
Scott, M.L.3
Baltimore, D.4
-
61
-
-
79956300350
-
Understanding systems-level properties: timely stories from the study of clocks
-
Hogenesch J.B., Ueda H.R. Understanding systems-level properties: timely stories from the study of clocks. Nat. Rev. Genet. 2011, 12:407.
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 407
-
-
Hogenesch, J.B.1
Ueda, H.R.2
-
62
-
-
33745000977
-
Noise-resistant and synchronized oscillation of the segmentation clock
-
Horikawa K., Ishimatsu K., Yoshimoto E., Kondo S., Takeda H. Noise-resistant and synchronized oscillation of the segmentation clock. Nature 2006, 441:719.
-
(2006)
Nature
, vol.441
, pp. 719
-
-
Horikawa, K.1
Ishimatsu, K.2
Yoshimoto, E.3
Kondo, S.4
Takeda, H.5
-
63
-
-
0028356962
-
Glucocorticoid receptors in ATP-depleted cells. Dephosphorylation, loss of hormone binding, HSP90 dissociation, and ATP-dependent cycling
-
Hu L.M., Bodwell J., Hu J.M., Orti E., Munck A. Glucocorticoid receptors in ATP-depleted cells. Dephosphorylation, loss of hormone binding, HSP90 dissociation, and ATP-dependent cycling. J. Biol. Chem. 1994, 269:6571.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 6571
-
-
Hu, L.M.1
Bodwell, J.2
Hu, J.M.3
Orti, E.4
Munck, A.5
-
64
-
-
66349107101
-
Harmonics of circadian gene transcription in mammals
-
Hughes M.E., DiTacchio L., Hayes K.R., Vollmers C., Pulivarthy S., Baggs J.E., Panda S., Hogenesch J.B. Harmonics of circadian gene transcription in mammals. PLoS Genet. 2009, 5:e1000442.
-
(2009)
PLoS Genet.
, vol.5
-
-
Hughes, M.E.1
DiTacchio, L.2
Hayes, K.R.3
Vollmers, C.4
Pulivarthy, S.5
Baggs, J.E.6
Panda, S.7
Hogenesch, J.B.8
-
65
-
-
44149090025
-
TNF-induced MAP kinase activation oscillates in time
-
Iqbal J., Zaidi M. TNF-induced MAP kinase activation oscillates in time. Biochem. Biophys. Res. Commun. 2008, 371:906.
-
(2008)
Biochem. Biophys. Res. Commun.
, vol.371
, pp. 906
-
-
Iqbal, J.1
Zaidi, M.2
-
66
-
-
0022036752
-
Sexual dimorphism in the control of growth hormone secretion
-
Jansson J.O., Eden S., Isaksson O. Sexual dimorphism in the control of growth hormone secretion. Endocr. Rev. 1985, 6:128.
-
(1985)
Endocr. Rev.
, vol.6
, pp. 128
-
-
Jansson, J.O.1
Eden, S.2
Isaksson, O.3
-
67
-
-
0034707072
-
Notch signalling and the synchronization of the somite segmentation clock
-
Jiang Y.J., Aerne B.L., Smithers L., Haddon C., Ish-Horowicz D., Lewis J. Notch signalling and the synchronization of the somite segmentation clock. Nature 2000, 408:475.
-
(2000)
Nature
, vol.408
, pp. 475
-
-
Jiang, Y.J.1
Aerne, B.L.2
Smithers, L.3
Haddon, C.4
Ish-Horowicz, D.5
Lewis, J.6
-
68
-
-
40649106738
-
Interaction of the glucocorticoid receptor with the global chromatin landscape
-
John S., Sabo P.J., Johnson T.A., Sung M.H., Biddie S.C., Lightman S.L., Voss T.C., Davis S.R., Meltzer P.S., Stamatoyannopoulos J.A., Hager G.L. Interaction of the glucocorticoid receptor with the global chromatin landscape. Mol. Cell 2008, 29:611.
-
(2008)
Mol. Cell
, vol.29
, pp. 611
-
-
John, S.1
Sabo, P.J.2
Johnson, T.A.3
Sung, M.H.4
Biddie, S.C.5
Lightman, S.L.6
Voss, T.C.7
Davis, S.R.8
Meltzer, P.S.9
Stamatoyannopoulos, J.A.10
Hager, G.L.11
-
69
-
-
79952184341
-
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns
-
John S., Sabo P.J., Thurman R.E., Sung M.H., Biddie S.C., Johnson T.A., Hager G.L., Stamatoyannopoulos J.A. Chromatin accessibility pre-determines glucocorticoid receptor binding patterns. Nat. Genet. 2011, 43:264.
-
(2011)
Nat. Genet.
, vol.43
, pp. 264
-
-
John, S.1
Sabo, P.J.2
Thurman, R.E.3
Sung, M.H.4
Biddie, S.C.5
Johnson, T.A.6
Hager, G.L.7
Stamatoyannopoulos, J.A.8
-
70
-
-
55349084753
-
Structural insights into a circadian oscillator
-
Johnson C.H., Egli M., Stewart P.L. Structural insights into a circadian oscillator. Science 2008, 322:697.
-
(2008)
Science
, vol.322
, pp. 697
-
-
Johnson, C.H.1
Egli, M.2
Stewart, P.L.3
-
71
-
-
54249089082
-
Chromatin remodeling complexes interact dynamically with a glucocorticoid receptor regulated promoter
-
Johnson T.A., Elbi C., Parekh B.S., Hager G.L., John S. Chromatin remodeling complexes interact dynamically with a glucocorticoid receptor regulated promoter. Mol. Biol. Cell 2008, 19:3308.
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 3308
-
-
Johnson, T.A.1
Elbi, C.2
Parekh, B.S.3
Hager, G.L.4
John, S.5
-
72
-
-
19544379881
-
Stochasticity in gene expression: from theories to phenotypes
-
Kaern M., Elston T.C., Blake W.J., Collins J.J. Stochasticity in gene expression: from theories to phenotypes. Nat. Rev. Genet. 2005, 6:451.
-
(2005)
Nat. Rev. Genet.
, vol.6
, pp. 451
-
-
Kaern, M.1
Elston, T.C.2
Blake, W.J.3
Collins, J.J.4
-
73
-
-
48249105439
-
Ultradian oscillators in somite segmentation and other biological events
-
Kageyama R., Yoshiura S., Masamizu Y., Niwa Y. Ultradian oscillators in somite segmentation and other biological events. Cold Spring Harb. Symp. Quant. Biol. 2007, 72:451.
-
(2007)
Cold Spring Harb. Symp. Quant. Biol.
, vol.72
, pp. 451
-
-
Kageyama, R.1
Yoshiura, S.2
Masamizu, Y.3
Niwa, Y.4
-
74
-
-
10044250938
-
Dynamic interactions of a transcription factor with DNA are accelerated by a chromatin remodeller
-
Karpova T.S., Chen T.Y., Sprague B.L., McNally J.G. Dynamic interactions of a transcription factor with DNA are accelerated by a chromatin remodeller. EMBO Rep. 2004, 5:1064.
-
(2004)
EMBO Rep.
, vol.5
, pp. 1064
-
-
Karpova, T.S.1
Chen, T.Y.2
Sprague, B.L.3
McNally, J.G.4
-
75
-
-
38549126635
-
Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter
-
Karpova T.S., Kim M.J., Spriet C., Nalley K., Stasevich T.J., Kherrouche Z., Heliot L., McNally J.G. Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter. Science 2008, 319:466.
-
(2008)
Science
, vol.319
, pp. 466
-
-
Karpova, T.S.1
Kim, M.J.2
Spriet, C.3
Nalley, K.4
Stasevich, T.J.5
Kherrouche, Z.6
Heliot, L.7
McNally, J.G.8
-
76
-
-
0025806781
-
Measurement of ligand-induced activation in single viable T cells using the lacZ reporter gene
-
Karttunen J., Shastri N. Measurement of ligand-induced activation in single viable T cells using the lacZ reporter gene. Proc. Natl. Acad. Sci. U. S. A. 1991, 88:3972.
-
(1991)
Proc. Natl. Acad. Sci. U. S. A.
, vol.88
, pp. 3972
-
-
Karttunen, J.1
Shastri, N.2
-
77
-
-
33747388013
-
IkappaBepsilon provides negative feedback to control NF-kappaB oscillations, signaling dynamics, and inflammatory gene expression
-
Kearns J.D., Basak S., Werner S.L., Huang C.S., Hoffmann A. IkappaBepsilon provides negative feedback to control NF-kappaB oscillations, signaling dynamics, and inflammatory gene expression. J. Cell Biol. 2006, 173:659.
-
(2006)
J. Cell Biol.
, vol.173
, pp. 659
-
-
Kearns, J.D.1
Basak, S.2
Werner, S.L.3
Huang, C.S.4
Hoffmann, A.5
-
78
-
-
77954995403
-
Adrenal glucocorticoids have a key role in circadian resynchronization in a mouse model of jet lag
-
Kiessling S., Eichele G., Oster H. Adrenal glucocorticoids have a key role in circadian resynchronization in a mouse model of jet lag. J. Clin. Invest. 2010, 120:2600.
-
(2010)
J. Clin. Invest.
, vol.120
, pp. 2600
-
-
Kiessling, S.1
Eichele, G.2
Oster, H.3
-
79
-
-
0037049641
-
The transcription cycle of RNA polymerase II in living cells
-
Kimura H., Sugaya K., Cook P.R. The transcription cycle of RNA polymerase II in living cells. J. Cell Biol. 2002, 159:777.
-
(2002)
J. Cell Biol.
, vol.159
, pp. 777
-
-
Kimura, H.1
Sugaya, K.2
Cook, P.R.3
-
80
-
-
0842342616
-
A genomewide oscillation in transcription gates DNA replication and cell cycle
-
Klevecz R.R., Bolen J., Forrest G., Murray D.B. A genomewide oscillation in transcription gates DNA replication and cell cycle. Proc. Natl. Acad. Sci. U. S. A. 2004, 101:1200.
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 1200
-
-
Klevecz, R.R.1
Bolen, J.2
Forrest, G.3
Murray, D.B.4
-
81
-
-
0025127307
-
The dose dependence of glucocorticoid-inducible gene expression results from changes in the number of transcriptionally active templates
-
Ko M.S., Nakauchi H., Takahashi N. The dose dependence of glucocorticoid-inducible gene expression results from changes in the number of transcriptionally active templates. EMBO J. 1990, 9:2835.
-
(1990)
EMBO J.
, vol.9
, pp. 2835
-
-
Ko, M.S.1
Nakauchi, H.2
Takahashi, N.3
-
83
-
-
0030875241
-
A Darwinian theory for the origin of cellular differentiation
-
Kupiec J.J. A Darwinian theory for the origin of cellular differentiation. Mol. Gen. Genet. 1997, 255:201.
-
(1997)
Mol. Gen. Genet.
, vol.255
, pp. 201
-
-
Kupiec, J.J.1
-
84
-
-
25444489027
-
Phenotypic diversity, population growth, and information in fluctuating environments
-
Kussell E., Leibler S. Phenotypic diversity, population growth, and information in fluctuating environments. Science 2005, 309:2075.
-
(2005)
Science
, vol.309
, pp. 2075
-
-
Kussell, E.1
Leibler, S.2
-
85
-
-
28744455886
-
The strength of indecisiveness: oscillatory behavior for better cell fate determination
-
Lahav G. The strength of indecisiveness: oscillatory behavior for better cell fate determination. Sci. STKE 2004, 2004:e55.
-
(2004)
Sci. STKE
, vol.2004
-
-
Lahav, G.1
-
86
-
-
0842332406
-
Dynamics of the p53-Mdm2 feedback loop in individual cells
-
Lahav G., Rosenfeld N., Sigal A., Geva-Zatorsky N., Levine A.J., Elowitz M.B., Alon U. Dynamics of the p53-Mdm2 feedback loop in individual cells. Nat. Genet. 2004, 36:147.
-
(2004)
Nat. Genet.
, vol.36
, pp. 147
-
-
Lahav, G.1
Rosenfeld, N.2
Sigal, A.3
Geva-Zatorsky, N.4
Levine, A.J.5
Elowitz, M.B.6
Alon, U.7
-
87
-
-
84255206549
-
Cryptochromes mediate rhythmic repression of the glucocorticoid receptor
-
Lamia K.A., Papp S.J., Yu R.T., Barish G.D., Uhlenhaut N.H., Jonker J.W., Downes M., Evans R.M. Cryptochromes mediate rhythmic repression of the glucocorticoid receptor. Nature 2011, 480:552.
-
(2011)
Nature
, vol.480
, pp. 552
-
-
Lamia, K.A.1
Papp, S.J.2
Yu, R.T.3
Barish, G.D.4
Uhlenhaut, N.H.5
Jonker, J.W.6
Downes, M.7
Evans, R.M.8
-
88
-
-
82455199121
-
What do expression dynamics tell us about the mechanism of transcription?
-
Larson D.R. What do expression dynamics tell us about the mechanism of transcription?. Curr. Opin. Genet. Dev. 2011, 21:591.
-
(2011)
Curr. Opin. Genet. Dev.
, vol.21
, pp. 591
-
-
Larson, D.R.1
-
90
-
-
79955407832
-
Real-time observation of transcription initiation and elongation on an endogenous yeast gene
-
Larson D.R., Zenklusen D., Wu B., Chao J.A., Singer R.H. Real-time observation of transcription initiation and elongation on an endogenous yeast gene. Science 2011, 332:475.
-
(2011)
Science
, vol.332
, pp. 475
-
-
Larson, D.R.1
Zenklusen, D.2
Wu, B.3
Chao, J.A.4
Singer, R.H.5
-
91
-
-
67650816271
-
Dynamic in vivo binding of STAT5 to growth hormone-regulated genes in intact rat liver. Sex-specific binding at low- but not high-affinity STAT5 sites
-
Laz E.V., Sugathan A., Waxman D.J. Dynamic in vivo binding of STAT5 to growth hormone-regulated genes in intact rat liver. Sex-specific binding at low- but not high-affinity STAT5 sites. Mol. Endocrinol. 2009, 23:1242.
-
(2009)
Mol. Endocrinol.
, vol.23
, pp. 1242
-
-
Laz, E.V.1
Sugathan, A.2
Waxman, D.J.3
-
92
-
-
33646800522
-
Sequential recruitment and combinatorial assembling of multiprotein complexes in transcriptional activation
-
Lemaire V., Lee C.F., Lei J., Metivier R., Glass L. Sequential recruitment and combinatorial assembling of multiprotein complexes in transcriptional activation. Phys. Rev. Lett. 2006, 96:198102.
-
(2006)
Phys. Rev. Lett.
, vol.96
, pp. 198102
-
-
Lemaire, V.1
Lee, C.F.2
Lei, J.3
Metivier, R.4
Glass, L.5
-
93
-
-
0142153379
-
Calcium oscillations in T-cells: mechanisms and consequences for gene expression
-
Lewis R.S. Calcium oscillations in T-cells: mechanisms and consequences for gene expression. Biochem. Soc. Trans. 2003, 31:925.
-
(2003)
Biochem. Soc. Trans.
, vol.31
, pp. 925
-
-
Lewis, R.S.1
-
94
-
-
77956912421
-
The crucial role of pulsatile activity of the HPA axis for continuous dynamic equilibration
-
Lightman S.L., Conway-Campbell B.L. The crucial role of pulsatile activity of the HPA axis for continuous dynamic equilibration. Nat. Rev. Neurosci. 2010, 11:710.
-
(2010)
Nat. Rev. Neurosci.
, vol.11
, pp. 710
-
-
Lightman, S.L.1
Conway-Campbell, B.L.2
-
95
-
-
40849130610
-
The significance of glucocorticoid pulsatility
-
Lightman S.L., Wiles C.C., Atkinson H.C., Henley D.E., Russell G.M., Leendertz J.A., McKenna M.A., Spiga F., Wood S.A., Conway-Campbell B.L. The significance of glucocorticoid pulsatility. Eur. J. Pharmacol. 2008, 583:255.
-
(2008)
Eur. J. Pharmacol.
, vol.583
, pp. 255
-
-
Lightman, S.L.1
Wiles, C.C.2
Atkinson, H.C.3
Henley, D.E.4
Russell, G.M.5
Leendertz, J.A.6
McKenna, M.A.7
Spiga, F.8
Wood, S.A.9
Conway-Campbell, B.L.10
-
96
-
-
18844457339
-
The use of oscillatory signals in the study of genetic networks
-
Lipan O., Wong W.H. The use of oscillatory signals in the study of genetic networks. Proc. Natl. Acad. Sci. U. S. A. 2005, 102:7063.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 7063
-
-
Lipan, O.1
Wong, W.H.2
-
97
-
-
34548660850
-
Mammalian circadian signaling networks and therapeutic targets
-
Liu A.C., Lewis W.G., Kay S.A. Mammalian circadian signaling networks and therapeutic targets. Nat. Chem. Biol. 2007, 3:630.
-
(2007)
Nat. Chem. Biol.
, vol.3
, pp. 630
-
-
Liu, A.C.1
Lewis, W.G.2
Kay, S.A.3
-
98
-
-
0032915842
-
Chromatin recycling of glucocorticoid receptors: implications for multiple roles of heat shock protein 90
-
Liu J., DeFranco D.B. Chromatin recycling of glucocorticoid receptors: implications for multiple roles of heat shock protein 90. Mol. Endocrinol. 1999, 13:355.
-
(1999)
Mol. Endocrinol.
, vol.13
, pp. 355
-
-
Liu, J.1
DeFranco, D.B.2
-
99
-
-
21444449061
-
Synchronised cycling gene oscillations in presomitic mesoderm cells require cell-cell contact
-
Maroto M., Dale J.K., Dequeant M.L., Petit A.C., Pourquie O. Synchronised cycling gene oscillations in presomitic mesoderm cells require cell-cell contact. Int. J. Dev. Biol. 2005, 49:309.
-
(2005)
Int. J. Dev. Biol.
, vol.49
, pp. 309
-
-
Maroto, M.1
Dale, J.K.2
Dequeant, M.L.3
Petit, A.C.4
Pourquie, O.5
-
100
-
-
31944447678
-
Real-time imaging of the somite segmentation clock: revelation of unstable oscillators in the individual presomitic mesoderm cells
-
Masamizu Y., Ohtsuka T., Takashima Y., Nagahara H., Takenaka Y., Yoshikawa K., Okamura H., Kageyama R. Real-time imaging of the somite segmentation clock: revelation of unstable oscillators in the individual presomitic mesoderm cells. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:1313.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 1313
-
-
Masamizu, Y.1
Ohtsuka, T.2
Takashima, Y.3
Nagahara, H.4
Takenaka, Y.5
Yoshikawa, K.6
Okamura, H.7
Kageyama, R.8
-
101
-
-
84855892248
-
Monitoring dynamic binding of chromatin proteins in vivo by fluorescence correlation spectroscopy and temporal image correlation spectroscopy
-
Mazza D., Stasevich T.J., Karpova T.S., McNally J.G. Monitoring dynamic binding of chromatin proteins in vivo by fluorescence correlation spectroscopy and temporal image correlation spectroscopy. Meth. Mol. Biol. 2012, 833:177.
-
(2012)
Meth. Mol. Biol.
, vol.833
, pp. 177
-
-
Mazza, D.1
Stasevich, T.J.2
Karpova, T.S.3
McNally, J.G.4
-
102
-
-
79251560384
-
Ultradian cortisol pulsatility encodes a distinct, biologically important signal
-
McMaster A., Jangani M., Sommer P., Han N., Brass A., Beesley S., Lu W., Berry A., Loudon A., Donn R., Ray D.W. Ultradian cortisol pulsatility encodes a distinct, biologically important signal. PLoS One 2011, 6:e15766.
-
(2011)
PLoS One
, vol.6
-
-
McMaster, A.1
Jangani, M.2
Sommer, P.3
Han, N.4
Brass, A.5
Beesley, S.6
Lu, W.7
Berry, A.8
Loudon, A.9
Donn, R.10
Ray, D.W.11
-
103
-
-
0343415609
-
The glucocorticoid receptor: rapid exchange with regulatory sites in living cells
-
McNally J.G., Mueller W.G., Walker D., Wolford R.G., Hager G.L. The glucocorticoid receptor: rapid exchange with regulatory sites in living cells. Science 2000, 287:1262.
-
(2000)
Science
, vol.287
, pp. 1262
-
-
McNally, J.G.1
Mueller, W.G.2
Walker, D.3
Wolford, R.G.4
Hager, G.L.5
-
104
-
-
2642544592
-
Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter
-
Metivier R., Penot G., Hubner M.R., Reid G., Brand H., Kos M., Gannon F. Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter. Cell 2003, 115:751.
-
(2003)
Cell
, vol.115
, pp. 751
-
-
Metivier, R.1
Penot, G.2
Hubner, M.R.3
Reid, G.4
Brand, H.5
Kos, M.6
Gannon, F.7
-
105
-
-
33645820442
-
Transcription in four dimensions: nuclear receptor-directed initiation of gene expression
-
Metivier R., Reid G., Gannon F. Transcription in four dimensions: nuclear receptor-directed initiation of gene expression. EMBO Rep. 2006, 7:161.
-
(2006)
EMBO Rep.
, vol.7
, pp. 161
-
-
Metivier, R.1
Reid, G.2
Gannon, F.3
-
106
-
-
55249123112
-
New derivatives of GnRH as potential anticancer therapeutic agents
-
Mezo G., Manea M., Szabi I., Vincze B., Kovacs M. New derivatives of GnRH as potential anticancer therapeutic agents. Curr. Med. Chem. 2008, 15:2366.
-
(2008)
Curr. Med. Chem.
, vol.15
, pp. 2366
-
-
Mezo, G.1
Manea, M.2
Szabi, I.3
Vincze, B.4
Kovacs, M.5
-
107
-
-
0037329056
-
The p53-Mdm2 module and the ubiquitin system
-
Michael D., Oren M. The p53-Mdm2 module and the ubiquitin system. Semin. Cancer Biol. 2003, 13:49.
-
(2003)
Semin. Cancer Biol.
, vol.13
, pp. 49
-
-
Michael, D.1
Oren, M.2
-
108
-
-
0020214059
-
Association between plasma level of growth hormone and sex differentiation of hepatic steroid metabolism in the rat
-
Mode A., Gustafsson J.A., Jansson J.O., Eden S., Isaksson O. Association between plasma level of growth hormone and sex differentiation of hepatic steroid metabolism in the rat. Endocrinology 1982, 111:1692.
-
(1982)
Endocrinology
, vol.111
, pp. 1692
-
-
Mode, A.1
Gustafsson, J.A.2
Jansson, J.O.3
Eden, S.4
Isaksson, O.5
-
109
-
-
79959875504
-
Cell autonomy and synchrony of suprachiasmatic nucleus circadian oscillators
-
Mohawk J.A., Takahashi J.S. Cell autonomy and synchrony of suprachiasmatic nucleus circadian oscillators. Trends Neurosci. 2011, 34:349.
-
(2011)
Trends Neurosci.
, vol.34
, pp. 349
-
-
Mohawk, J.A.1
Takahashi, J.S.2
-
110
-
-
0033959744
-
MDM2-master regulator of the p53 tumor suppressor protein
-
Momand J., Wu H.H., Dasgupta G. MDM2-master regulator of the p53 tumor suppressor protein. Gene 2000, 242:15.
-
(2000)
Gene
, vol.242
, pp. 15
-
-
Momand, J.1
Wu, H.H.2
Dasgupta, G.3
-
112
-
-
84855906472
-
Monitoring dynamic binding of chromatin proteins in vivo by fluorescence recovery after photobleaching
-
Mueller F., Karpova T.S., Mazza D., McNally J.G. Monitoring dynamic binding of chromatin proteins in vivo by fluorescence recovery after photobleaching. Meth. Mol. Biol. 2012, 833:153.
-
(2012)
Meth. Mol. Biol.
, vol.833
, pp. 153
-
-
Mueller, F.1
Karpova, T.S.2
Mazza, D.3
McNally, J.G.4
-
113
-
-
43149119497
-
Evidence for a common mode of transcription factor interaction with chromatin as revealed by improved quantitative fluorescence recovery after photobleaching
-
Mueller F., Wach P., McNally J.G. Evidence for a common mode of transcription factor interaction with chromatin as revealed by improved quantitative fluorescence recovery after photobleaching. Biophys. J. 2008, 94:3323.
-
(2008)
Biophys. J.
, vol.94
, pp. 3323
-
-
Mueller, F.1
Wach, P.2
McNally, J.G.3
-
114
-
-
0017038708
-
Kinetics of glucocorticoid-receptor complexes in rat thymus cells
-
Munck A., Foley R. Kinetics of glucocorticoid-receptor complexes in rat thymus cells. J. Steroid Biochem. 1976, 7:1117.
-
(1976)
J. Steroid Biochem.
, vol.7
, pp. 1117
-
-
Munck, A.1
Foley, R.2
-
115
-
-
80054079577
-
Epigenetic programming of the HPA axis: early life decides
-
Murgatroyd C., Spengler D. Epigenetic programming of the HPA axis: early life decides. Stress 2011, 14:581.
-
(2011)
Stress
, vol.14
, pp. 581
-
-
Murgatroyd, C.1
Spengler, D.2
-
116
-
-
0029989521
-
Light-induced degradation of TIMELESS and entrainment of the Drosophila circadian clock
-
Myers M.P., Wager-Smith K., Rothenfluh-Hilfiker A., Young M.W. Light-induced degradation of TIMELESS and entrainment of the Drosophila circadian clock. Science 1996, 271:1736.
-
(1996)
Science
, vol.271
, pp. 1736
-
-
Myers, M.P.1
Wager-Smith, K.2
Rothenfluh-Hilfiker, A.3
Young, M.W.4
-
117
-
-
67349271210
-
Circadian rhythm transcription factor CLOCK regulates the transcriptional activity of the glucocorticoid receptor by acetylating its hinge region lysine cluster: potential physiological implications
-
Nader N., Chrousos G.P., Kino T. Circadian rhythm transcription factor CLOCK regulates the transcriptional activity of the glucocorticoid receptor by acetylating its hinge region lysine cluster: potential physiological implications. FASEB J. 2009, 23:1572.
-
(2009)
FASEB J.
, vol.23
, pp. 1572
-
-
Nader, N.1
Chrousos, G.P.2
Kino, T.3
-
118
-
-
1942502820
-
Rapid periodic binding and displacement of the glucocorticoid receptor during chromatin remodeling
-
Nagaich A.K., Walker D.A., Wolford R.G., Hager G.L. Rapid periodic binding and displacement of the glucocorticoid receptor during chromatin remodeling. Mol. Cell 2004, 14:163.
-
(2004)
Mol. Cell
, vol.14
, pp. 163
-
-
Nagaich, A.K.1
Walker, D.A.2
Wolford, R.G.3
Hager, G.L.4
-
119
-
-
33748331286
-
Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo
-
Nalley K., Johnston S.A., Kodadek T. Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo. Nature 2006, 442:1054.
-
(2006)
Nature
, vol.442
, pp. 1054
-
-
Nalley, K.1
Johnston, S.A.2
Kodadek, T.3
-
120
-
-
7444254365
-
Oscillations in NF-kappaB signaling control the dynamics of gene expression
-
Nelson D.E., Ihekwaba A.E., Elliott M., Johnson J.R., Gibney C.A., Foreman B.E., Nelson G., See V., Horton C.A., Spiller D.G., Edwards S.W., McDowell H.P., Unitt J.F., Sullivan E., Grimley R., Benson N., Broomhead D., Kell D.B., White M.R. Oscillations in NF-kappaB signaling control the dynamics of gene expression. Science 2004, 306:704.
-
(2004)
Science
, vol.306
, pp. 704
-
-
Nelson, D.E.1
Ihekwaba, A.E.2
Elliott, M.3
Johnson, J.R.4
Gibney, C.A.5
Foreman, B.E.6
Nelson, G.7
See, V.8
Horton, C.A.9
Spiller, D.G.10
Edwards, S.W.11
McDowell, H.P.12
Unitt, J.F.13
Sullivan, E.14
Grimley, R.15
Benson, N.16
Broomhead, D.17
Kell, D.B.18
White, M.R.19
-
121
-
-
10644221132
-
Oscillations in transcription factor dynamics: a new way to control gene expression
-
Nelson D.E., See V., Nelson G., White M.R. Oscillations in transcription factor dynamics: a new way to control gene expression. Biochem. Soc. Trans. 2004, 32:1090.
-
(2004)
Biochem. Soc. Trans.
, vol.32
, pp. 1090
-
-
Nelson, D.E.1
See, V.2
Nelson, G.3
White, M.R.4
-
122
-
-
0032167516
-
Transcription occurs in pulses in muscle fibers
-
Newlands S., Levitt L.K., Robinson C.S., Karpf A.B., Hodgson V.R., Wade R.P., Hardeman E.C. Transcription occurs in pulses in muscle fibers. Genes Dev. 1998, 12:2748.
-
(1998)
Genes Dev.
, vol.12
, pp. 2748
-
-
Newlands, S.1
Levitt, L.K.2
Robinson, C.S.3
Karpf, A.B.4
Hodgson, V.R.5
Wade, R.P.6
Hardeman, E.C.7
-
123
-
-
79251566511
-
Circadian clocks in human red blood cells
-
O'Neill J.S., Reddy A.B. Circadian clocks in human red blood cells. Nature 2011, 469:498.
-
(2011)
Nature
, vol.469
, pp. 498
-
-
O'Neill, J.S.1
Reddy, A.B.2
-
124
-
-
79251539603
-
Circadian rhythms persist without transcription in a eukaryote
-
O'Neill J.S., Van O.G., Dixon L.E., Troein C., Corellou F., Bouget F.Y., Reddy A.B., Millar A.J. Circadian rhythms persist without transcription in a eukaryote. Nature 2011, 469:554.
-
(2011)
Nature
, vol.469
, pp. 554
-
-
O'Neill, J.S.1
Van, O.G.2
Dixon, L.E.3
Troein, C.4
Corellou, F.5
Bouget, F.Y.6
Reddy, A.B.7
Millar, A.J.8
-
125
-
-
4544262270
-
Clock genes in cell clocks: roles, actions, and mysteries
-
Okamura H. Clock genes in cell clocks: roles, actions, and mysteries. J. Biol. Rhythms 2004, 19:388.
-
(2004)
J. Biol. Rhythms
, vol.19
, pp. 388
-
-
Okamura, H.1
-
126
-
-
5444243359
-
Active genes dynamically colocalize to shared sites of ongoing transcription
-
Osborne C.S., Chakalova L., Brown K.E., Carter D., Horton A., Debrand E., Goyenechea B., Mitchell J.A., Lopes S., Reik W., Fraser P. Active genes dynamically colocalize to shared sites of ongoing transcription. Nat. Genet. 2004, 36:1065.
-
(2004)
Nat. Genet.
, vol.36
, pp. 1065
-
-
Osborne, C.S.1
Chakalova, L.2
Brown, K.E.3
Carter, D.4
Horton, A.5
Debrand, E.6
Goyenechea, B.7
Mitchell, J.A.8
Lopes, S.9
Reik, W.10
Fraser, P.11
-
127
-
-
38349185928
-
Effects of molecular memory and bursting on fluctuations in gene expression
-
Pedraza J.M., Paulsson J. Effects of molecular memory and bursting on fluctuations in gene expression. Science 2008, 319:339.
-
(2008)
Science
, vol.319
, pp. 339
-
-
Pedraza, J.M.1
Paulsson, J.2
-
128
-
-
0025007114
-
Quantitative analysis of the glucocorticoid receptor-DNA interaction at the mouse mammary tumor virus glucocorticoid response element
-
Perlmann T., Eriksson P., Wrange O. Quantitative analysis of the glucocorticoid receptor-DNA interaction at the mouse mammary tumor virus glucocorticoid response element. J. Biol. Chem. 1990, 265:17222.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 17222
-
-
Perlmann, T.1
Eriksson, P.2
Wrange, O.3
-
129
-
-
0034611785
-
High mobility of proteins in the mammalian cell nucleus
-
Phair R.D., Misteli T. High mobility of proteins in the mammalian cell nucleus. Nature 2000, 404:604.
-
(2000)
Nature
, vol.404
, pp. 604
-
-
Phair, R.D.1
Misteli, T.2
-
131
-
-
0038115065
-
The segmentation clock: converting embryonic time into spatial pattern
-
Pourquie O. The segmentation clock: converting embryonic time into spatial pattern. Science 2003, 301:328.
-
(2003)
Science
, vol.301
, pp. 328
-
-
Pourquie, O.1
-
132
-
-
79952280670
-
The developmental impact of prenatal stress, prenatal dexamethasone and postnatal social stress on physiology, behaviour and neuroanatomy of primate offspring: studies in rhesus macaque and common marmoset
-
Pryce C.R., Aubert Y., Maier C., Pearce P.C., Fuchs E. The developmental impact of prenatal stress, prenatal dexamethasone and postnatal social stress on physiology, behaviour and neuroanatomy of primate offspring: studies in rhesus macaque and common marmoset. Psychopharmacology (Berl.) 2011, 214:33.
-
(2011)
Psychopharmacology (Berl.)
, vol.214
, pp. 33
-
-
Pryce, C.R.1
Aubert, Y.2
Maier, C.3
Pearce, P.C.4
Fuchs, E.5
-
133
-
-
79955768436
-
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells
-
Rabani M., Levin J.Z., Fan L., Adiconis X., Raychowdhury R., Garber M., Gnirke A., Nusbaum C., Hacohen N., Friedman N., Amit I., Regev A. Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells. Nat. Biotechnol. 2011, 29:436.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 436
-
-
Rabani, M.1
Levin, J.Z.2
Fan, L.3
Adiconis, X.4
Raychowdhury, R.5
Garber, M.6
Gnirke, A.7
Nusbaum, C.8
Hacohen, N.9
Friedman, N.10
Amit, I.11
Regev, A.12
-
134
-
-
33748994704
-
Stochastic mRNA synthesis in mammalian cells
-
Raj A., Peskin C.S., Tranchina D., Vargas D.Y., Tyagi S. Stochastic mRNA synthesis in mammalian cells. PLoS Biol. 2006, 4:e309.
-
(2006)
PLoS Biol.
, vol.4
-
-
Raj, A.1
Peskin, C.S.2
Tranchina, D.3
Vargas, D.Y.4
Tyagi, S.5
-
135
-
-
77957069138
-
Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes
-
Raj A., Tyagi S. Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes. Methods Enzymol. 2010, 472:365.
-
(2010)
Methods Enzymol.
, vol.472
, pp. 365
-
-
Raj, A.1
Tyagi, S.2
-
136
-
-
53549123008
-
Nature, nurture, or chance: stochastic gene expression and its consequences
-
Raj A., Van O.A. Nature, nurture, or chance: stochastic gene expression and its consequences. Cell 2008, 135:216.
-
(2008)
Cell
, vol.135
, pp. 216
-
-
Raj, A.1
Van, O.A.2
-
137
-
-
14844348177
-
Ligand specific dynamics of the progesterone receptor in living cells and during chromatin remodeling in vitro
-
Rayasam G.V., Elbi C., Walker D.A., Wolford R.G., Fletcher T.M., Edwards D.P., Hager G.L. Ligand specific dynamics of the progesterone receptor in living cells and during chromatin remodeling in vitro. Mol. Cell. Biol. 2005, 25:2406.
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 2406
-
-
Rayasam, G.V.1
Elbi, C.2
Walker, D.A.3
Wolford, R.G.4
Fletcher, T.M.5
Edwards, D.P.6
Hager, G.L.7
-
138
-
-
55949120076
-
Marking time: the dynamic role of chromatin and covalent modification in transcription
-
Reid G., Gallais R., Metivier R. Marking time: the dynamic role of chromatin and covalent modification in transcription. Int. J. Biochem. Cell Biol. 2009, 41:155.
-
(2009)
Int. J. Biochem. Cell Biol.
, vol.41
, pp. 155
-
-
Reid, G.1
Gallais, R.2
Metivier, R.3
-
139
-
-
0025815198
-
Glucocorticoids are required for establishment and maintenance of an alteration in chromatin structure: induction leads to a reversible disruption of nucleosomes over an enhancer
-
Reik A., Schutz G., Stewart A.F. Glucocorticoids are required for establishment and maintenance of an alteration in chromatin structure: induction leads to a reversible disruption of nucleosomes over an enhancer. EMBO J. 1991, 10:2569.
-
(1991)
EMBO J.
, vol.10
, pp. 2569
-
-
Reik, A.1
Schutz, G.2
Stewart, A.F.3
-
140
-
-
70449348176
-
Mechanisms generating diversity in glucocorticoid receptor signaling
-
Revollo J.R., Cidlowski J.A. Mechanisms generating diversity in glucocorticoid receptor signaling. Ann. N. Y. Acad. Sci. 2009, 1179:167.
-
(2009)
Ann. N. Y. Acad. Sci.
, vol.1179
, pp. 167
-
-
Revollo, J.R.1
Cidlowski, J.A.2
-
141
-
-
34848818078
-
Synchrony dynamics during initiation, failure, and rescue of the segmentation clock
-
Riedel-Kruse I.H., Muller C., Oates A.C. Synchrony dynamics during initiation, failure, and rescue of the segmentation clock. Science 2007, 317:1911.
-
(2007)
Science
, vol.317
, pp. 1911
-
-
Riedel-Kruse, I.H.1
Muller, C.2
Oates, A.C.3
-
142
-
-
0035370886
-
Circadian regulation of gene expression in animals
-
Ripperger J.A., Schibler U. Circadian regulation of gene expression in animals. Curr. Opin. Cell Biol. 2001, 13:357.
-
(2001)
Curr. Opin. Cell Biol.
, vol.13
, pp. 357
-
-
Ripperger, J.A.1
Schibler, U.2
-
143
-
-
33746413795
-
Identification of a PTH regulated gene selectively induced in vivo during PTH-mediated bone formation
-
Robinson J.A., Susulic V., Liu Y.B., Taylor C., Hardenburg J., Gironda V., Zhao W., Kharode Y., McLarney S., Bai Y., Malone D.P., Murrills R., Bex F. Identification of a PTH regulated gene selectively induced in vivo during PTH-mediated bone formation. J. Cell. Biochem. 2006, 98:1203.
-
(2006)
J. Cell. Biochem.
, vol.98
, pp. 1203
-
-
Robinson, J.A.1
Susulic, V.2
Liu, Y.B.3
Taylor, C.4
Hardenburg, J.5
Gironda, V.6
Zhao, W.7
Kharode, Y.8
McLarney, S.9
Bai, Y.10
Malone, D.P.11
Murrills, R.12
Bex, F.13
-
144
-
-
31044433976
-
Transcriptional response of steady-state yeast cultures to transient perturbations in carbon source
-
Ronen M., Botstein D. Transcriptional response of steady-state yeast cultures to transient perturbations in carbon source. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:389.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 389
-
-
Ronen, M.1
Botstein, D.2
-
145
-
-
3042535449
-
What's new with PTH in osteoporosis: where are we and where are we headed?
-
Rosen C.J. What's new with PTH in osteoporosis: where are we and where are we headed?. Trends Endocrinol. Metab. 2004, 15:229.
-
(2004)
Trends Endocrinol. Metab.
, vol.15
, pp. 229
-
-
Rosen, C.J.1
-
146
-
-
0028328719
-
Transcription of individual genes in eukaryotic cells occurs randomly and infrequently
-
Ross I.L., Browne C.M., Hume D.A. Transcription of individual genes in eukaryotic cells occurs randomly and infrequently. Immunol. Cell Biol. 1994, 72:177.
-
(1994)
Immunol. Cell Biol.
, vol.72
, pp. 177
-
-
Ross, I.L.1
Browne, C.M.2
Hume, D.A.3
-
147
-
-
0025339876
-
Light pulses that shift rhythms induce gene expression in the suprachiasmatic nucleus
-
Rusak B., Robertson H.A., Wisden W., Hunt S.P. Light pulses that shift rhythms induce gene expression in the suprachiasmatic nucleus. Science 1990, 248:1237.
-
(1990)
Science
, vol.248
, pp. 1237
-
-
Rusak, B.1
Robertson, H.A.2
Wisden, W.3
Hunt, S.P.4
-
149
-
-
33744821974
-
Stochastic dynamics of macromolecular-assembly networks
-
Saiz L., Vilar J.M. Stochastic dynamics of macromolecular-assembly networks. Mol. Syst. Biol. 2006, 2:2006.
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 2006
-
-
Saiz, L.1
Vilar, J.M.2
-
150
-
-
79953661480
-
Effect of promoter architecture on the cell-to-cell variability in gene expression
-
Sanchez A., Garcia H.G., Jones D., Phillips R., Kondev J. Effect of promoter architecture on the cell-to-cell variability in gene expression. PLoS Comput. Biol. 2011, 7:e1001100.
-
(2011)
PLoS Comput. Biol.
, vol.7
-
-
Sanchez, A.1
Garcia, H.G.2
Jones, D.3
Phillips, R.4
Kondev, J.5
-
151
-
-
42449140138
-
Transcriptional control of noise in gene expression
-
Sanchez A., Kondev J. Transcriptional control of noise in gene expression. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:5081.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 5081
-
-
Sanchez, A.1
Kondev, J.2
-
152
-
-
0025883418
-
Retinoic acid is a negative regulator of AP-1-responsive genes
-
Schule R., Rangarajan P., Yang N., Kliewer S., Ransone L.J., Bolado J., Verma I.M., Evans R.M. Retinoic acid is a negative regulator of AP-1-responsive genes. Proc. Natl. Acad. Sci. U. S. A. 1991, 88:6092.
-
(1991)
Proc. Natl. Acad. Sci. U. S. A.
, vol.88
, pp. 6092
-
-
Schule, R.1
Rangarajan, P.2
Yang, N.3
Kliewer, S.4
Ransone, L.J.5
Bolado, J.6
Verma, I.M.7
Evans, R.M.8
-
153
-
-
34250636349
-
Deterministic characterization of stochastic genetic circuits
-
Scott M., Hwa T., Ingalls B. Deterministic characterization of stochastic genetic circuits. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:7402.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 7402
-
-
Scott, M.1
Hwa, T.2
Ingalls, B.3
-
154
-
-
34249316880
-
Mechanisms of disease: glucocorticoids, their placental metabolism and fetal 'programming' of adult pathophysiology
-
Seckl J.R., Holmes M.C. Mechanisms of disease: glucocorticoids, their placental metabolism and fetal 'programming' of adult pathophysiology. Nat. Clin. Pract. Endocrinol. Metab. 2007, 3:479.
-
(2007)
Nat. Clin. Pract. Endocrinol. Metab.
, vol.3
, pp. 479
-
-
Seckl, J.R.1
Holmes, M.C.2
-
155
-
-
33746468080
-
Glucocorticoid "programming" and PTSD risk
-
Seckl J.R., Meaney M.J. Glucocorticoid "programming" and PTSD risk. Ann. N. Y. Acad. Sci. 2006, 1071:351.
-
(2006)
Ann. N. Y. Acad. Sci.
, vol.1071
, pp. 351
-
-
Seckl, J.R.1
Meaney, M.J.2
-
156
-
-
0033637703
-
Cofactor dynamics and sufficiency in estrogen receptor-regulated transcription
-
Shang Y., Hu X., DiRenzo J., Lazar M.A., Brown M. Cofactor dynamics and sufficiency in estrogen receptor-regulated transcription. Cell 2000, 103:843.
-
(2000)
Cell
, vol.103
, pp. 843
-
-
Shang, Y.1
Hu, X.2
DiRenzo, J.3
Lazar, M.A.4
Brown, M.5
-
157
-
-
71449121678
-
Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor
-
Shankaran H., Ippolito D.L., Chrisler W.B., Resat H., Bollinger N., Opresko L.K., Wiley H.S. Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor. Mol. Syst. Biol. 2009, 5:332.
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 332
-
-
Shankaran, H.1
Ippolito, D.L.2
Chrisler, W.B.3
Resat, H.4
Bollinger, N.5
Opresko, L.K.6
Wiley, H.S.7
-
158
-
-
33750451557
-
Estrogen-receptor-alpha exchange and chromatin dynamics are ligand- and domain-dependent
-
Sharp Z.D., Mancini M.G., Hinojos C.A., Dai F., Berno V., Szafran A.T., Smith K.P., Lele T.T., Ingber D.E., Mancini M.A. Estrogen-receptor-alpha exchange and chromatin dynamics are ligand- and domain-dependent. J. Cell Sci. 2006, 119:4101.
-
(2006)
J. Cell Sci.
, vol.119
, pp. 4101
-
-
Sharp, Z.D.1
Mancini, M.G.2
Hinojos, C.A.3
Dai, F.4
Berno, V.5
Szafran, A.T.6
Smith, K.P.7
Lele, T.T.8
Ingber, D.E.9
Mancini, M.A.10
-
159
-
-
33845257870
-
Variability and memory of protein levels in human cells
-
Sigal A., Milo R., Cohen A., Geva-Zatorsky N., Klein Y., Liron Y., Rosenfeld N., Danon T., Perzov N., Alon U. Variability and memory of protein levels in human cells. Nature 2006, 444:643.
-
(2006)
Nature
, vol.444
, pp. 643
-
-
Sigal, A.1
Milo, R.2
Cohen, A.3
Geva-Zatorsky, N.4
Klein, Y.5
Liron, Y.6
Rosenfeld, N.7
Danon, T.8
Perzov, N.9
Alon, U.10
-
160
-
-
77951081705
-
Metabolic cycling in single yeast cells from unsynchronized steady-state populations limited on glucose or phosphate
-
Silverman S.J., Petti A.A., Slavov N., Parsons L., Briehof R., Thiberge S.Y., Zenklusen D., Gandhi S.J., Larson D.R., Singer R.H., Botstein D. Metabolic cycling in single yeast cells from unsynchronized steady-state populations limited on glucose or phosphate. Proc. Natl. Acad. Sci. U. S. A. 2010, 107:6946.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 6946
-
-
Silverman, S.J.1
Petti, A.A.2
Slavov, N.3
Parsons, L.4
Briehof, R.5
Thiberge, S.Y.6
Zenklusen, D.7
Gandhi, S.J.8
Larson, D.R.9
Singer, R.H.10
Botstein, D.11
-
161
-
-
34547109349
-
Effects of intermittent parathyroid hormone (PTH) administration on SOST mRNA and protein in rat bone
-
Silvestrini G., Ballanti P., Leopizzi M., Sebastiani M., Berni S., Di V.M., Bonucci E. Effects of intermittent parathyroid hormone (PTH) administration on SOST mRNA and protein in rat bone. J. Mol. Histol. 2007, 38:261.
-
(2007)
J. Mol. Histol.
, vol.38
, pp. 261
-
-
Silvestrini, G.1
Ballanti, P.2
Leopizzi, M.3
Sebastiani, M.4
Berni, S.5
Di, V.M.6
Bonucci, E.7
-
162
-
-
77951604611
-
Transcriptional bursting from the HIV-1 promoter is a significant source of stochastic noise in HIV-1 gene expression
-
Singh A., Razooky B., Cox C.D., Simpson M.L., Weinberger L.S. Transcriptional bursting from the HIV-1 promoter is a significant source of stochastic noise in HIV-1 gene expression. Biophys. J. 2010, 98:L32-L34.
-
(2010)
Biophys. J.
, vol.98
-
-
Singh, A.1
Razooky, B.2
Cox, C.D.3
Simpson, M.L.4
Weinberger, L.S.5
-
163
-
-
13244291467
-
FRAP analysis of binding: proper and fitting
-
Sprague B.L., McNally J.G. FRAP analysis of binding: proper and fitting. Trends Cell Biol. 2005, 15:84.
-
(2005)
Trends Cell Biol.
, vol.15
, pp. 84
-
-
Sprague, B.L.1
McNally, J.G.2
-
164
-
-
2942690158
-
Analysis of binding reactions by fluorescence recovery after photobleaching
-
Sprague B.L., Pego R.L., Stavreva D.A., McNally J.G. Analysis of binding reactions by fluorescence recovery after photobleaching. Biophys. J. 2004, 86:3473.
-
(2004)
Biophys. J.
, vol.86
, pp. 3473
-
-
Sprague, B.L.1
Pego, R.L.2
Stavreva, D.A.3
McNally, J.G.4
-
165
-
-
51649121751
-
Regulation of TATA-binding protein dynamics in living yeast cells
-
Sprouse R.O., Karpova T.S., Mueller F., Dasgupta A., McNally J.G., Auble D.T. Regulation of TATA-binding protein dynamics in living yeast cells. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:13304.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 13304
-
-
Sprouse, R.O.1
Karpova, T.S.2
Mueller, F.3
Dasgupta, A.4
McNally, J.G.5
Auble, D.T.6
-
166
-
-
12144290835
-
Rapid glucocorticoid receptor exchange at a promoter is coupled to transcription and regulated by chaperones and proteasomes
-
Stavreva D.A., Muller W.G., Hager G.L., Smith C.L., McNally J.G. Rapid glucocorticoid receptor exchange at a promoter is coupled to transcription and regulated by chaperones and proteasomes. Mol. Cell. Biol. 2004, 24:2682.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 2682
-
-
Stavreva, D.A.1
Muller, W.G.2
Hager, G.L.3
Smith, C.L.4
McNally, J.G.5
-
167
-
-
69949126005
-
Ultradian hormone stimulation induces glucocorticoid receptor-mediated pulses of gene transcription
-
Stavreva D.A., Wiench M., John S., Conway-Campbell B.L., McKenna M.A., Pooley J.R., Johnson T.A., Voss T.C., Lightman S.L., Hager G.L. Ultradian hormone stimulation induces glucocorticoid receptor-mediated pulses of gene transcription. Nat. Cell Biol. 2009, 11:1093.
-
(2009)
Nat. Cell Biol.
, vol.11
, pp. 1093
-
-
Stavreva, D.A.1
Wiench, M.2
John, S.3
Conway-Campbell, B.L.4
McKenna, M.A.5
Pooley, J.R.6
Johnson, T.A.7
Voss, T.C.8
Lightman, S.L.9
Hager, G.L.10
-
168
-
-
0035141041
-
FRAP reveals that mobility of oestrogen receptor-alpha is ligand- and proteasome-dependent
-
Stenoien D.L., Patel K., Mancini M.G., Dutertre M., Smith C.L., O'Malley B.W., Mancini M.A. FRAP reveals that mobility of oestrogen receptor-alpha is ligand- and proteasome-dependent. Nat. Cell Biol. 2001, 3:15.
-
(2001)
Nat. Cell Biol.
, vol.3
, pp. 15
-
-
Stenoien, D.L.1
Patel, K.2
Mancini, M.G.3
Dutertre, M.4
Smith, C.L.5
O'Malley, B.W.6
Mancini, M.A.7
-
169
-
-
0036674316
-
The "other" circadian system: food as a Zeitgeber
-
Stephan F.K. The "other" circadian system: food as a Zeitgeber. J. Biol. Rhythms 2002, 17:284.
-
(2002)
J. Biol. Rhythms
, vol.17
, pp. 284
-
-
Stephan, F.K.1
-
170
-
-
76449108997
-
Digital nature of the immediate-early transcriptional response
-
Stevense M., Muramoto T., Muller I., Chubb J.R. Digital nature of the immediate-early transcriptional response. Development 2010, 137:579.
-
(2010)
Development
, vol.137
, pp. 579
-
-
Stevense, M.1
Muramoto, T.2
Muller, I.3
Chubb, J.R.4
-
171
-
-
44149091906
-
TNF-induced gene expression oscillates in time
-
Sun L., Yang G., Zaidi M., Iqbal J. TNF-induced gene expression oscillates in time. Biochem. Biophys. Res. Commun. 2008, 371:900.
-
(2008)
Biochem. Biophys. Res. Commun.
, vol.371
, pp. 900
-
-
Sun, L.1
Yang, G.2
Zaidi, M.3
Iqbal, J.4
-
172
-
-
44349102458
-
TNF-induced oscillations in combinatorial transcription factor binding
-
Sun L., Yang G., Zaidi M., Iqbal J. TNF-induced oscillations in combinatorial transcription factor binding. Biochem. Biophys. Res. Commun. 2008, 371:912.
-
(2008)
Biochem. Biophys. Res. Commun.
, vol.371
, pp. 912
-
-
Sun, L.1
Yang, G.2
Zaidi, M.3
Iqbal, J.4
-
173
-
-
70349687069
-
Sustained oscillations of NF-kappaB produce distinct genome scanning and gene expression profiles
-
Sung M.H., Salvatore L., De Lorenzi R., Indrawan A., Pasparakis M., Hager G.L., Bianchi M.E., Agresti A. Sustained oscillations of NF-kappaB produce distinct genome scanning and gene expression profiles. PLoS One 2009, 4:e7163.
-
(2009)
PLoS One
, vol.4
-
-
Sung, M.H.1
Salvatore, L.2
De Lorenzi, R.3
Indrawan, A.4
Pasparakis, M.5
Hager, G.L.6
Bianchi, M.E.7
Agresti, A.8
-
174
-
-
3042668006
-
In silico simulation of inhibitor drug effects on nuclear factor-kappaB pathway dynamics
-
Sung M.H., Simon R. In silico simulation of inhibitor drug effects on nuclear factor-kappaB pathway dynamics. Mol. Pharmacol. 2004, 66:70.
-
(2004)
Mol. Pharmacol.
, vol.66
, pp. 70
-
-
Sung, M.H.1
Simon, R.2
-
176
-
-
79952766407
-
Intronic delay is essential for oscillatory expression in the segmentation clock
-
Takashima Y., Ohtsuka T., Gonzalez A., Miyachi H., Kageyama R. Intronic delay is essential for oscillatory expression in the segmentation clock. Proc. Natl. Acad. Sci. U. S. A. 2011, 108:3300.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 3300
-
-
Takashima, Y.1
Ohtsuka, T.2
Gonzalez, A.3
Miyachi, H.4
Kageyama, R.5
-
177
-
-
0034750031
-
Temporal relationship between the sexually dimorphic spontaneous GH secretory profiles and hepatic STAT5 activity
-
Tannenbaum G.S., Choi H.K., Gurd W., Waxman D.J. Temporal relationship between the sexually dimorphic spontaneous GH secretory profiles and hepatic STAT5 activity. Endocrinology 2001, 142:4599.
-
(2001)
Endocrinology
, vol.142
, pp. 4599
-
-
Tannenbaum, G.S.1
Choi, H.K.2
Gurd, W.3
Waxman, D.J.4
-
178
-
-
0017253257
-
Evidence for an endogenous ultradian rhythm governing growth hormone secretion in the rat
-
Tannenbaum G.S., Martin J.B. Evidence for an endogenous ultradian rhythm governing growth hormone secretion in the rat. Endocrinology 1976, 98:562.
-
(1976)
Endocrinology
, vol.98
, pp. 562
-
-
Tannenbaum, G.S.1
Martin, J.B.2
-
179
-
-
2942555282
-
Stochastic gene expression in fluctuating environments
-
Thattai M., Van O.A. Stochastic gene expression in fluctuating environments. Genetics 2004, 167:523.
-
(2004)
Genetics
, vol.167
, pp. 523
-
-
Thattai, M.1
Van, O.A.2
-
180
-
-
33646030271
-
Intermittent parathyroid hormone therapy to increase bone formation
-
Thomas T. Intermittent parathyroid hormone therapy to increase bone formation. Joint Bone Spine 2006, 73:262.
-
(2006)
Joint Bone Spine
, vol.73
, pp. 262
-
-
Thomas, T.1
-
181
-
-
34447293087
-
Oscillations and temporal signalling in cells
-
Tiana G., Krishna S., Pigolotti S., Jensen M.H., Sneppen K. Oscillations and temporal signalling in cells. Phys. Biol. 2007, 4:R1.
-
(2007)
Phys. Biol.
, vol.4
-
-
Tiana, G.1
Krishna, S.2
Pigolotti, S.3
Jensen, M.H.4
Sneppen, K.5
-
182
-
-
84855426349
-
Decoding GnRH neurohormone pulse frequency by convergent signalling modules
-
Tsaneva-Atanasova K., Mina P., Caunt C.J., Armstrong S.P., McArdle C.A. Decoding GnRH neurohormone pulse frequency by convergent signalling modules. J. R. Soc. Interface 2012, 9:170.
-
(2012)
J. R. Soc. Interface
, vol.9
, pp. 170
-
-
Tsaneva-Atanasova, K.1
Mina, P.2
Caunt, C.J.3
Armstrong, S.P.4
McArdle, C.A.5
-
183
-
-
27944487902
-
Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes
-
Tu B.P., Kudlicki A., Rowicka M., McKnight S.L. Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes. Science 2005, 310:1152.
-
(2005)
Science
, vol.310
, pp. 1152
-
-
Tu, B.P.1
Kudlicki, A.2
Rowicka, M.3
McKnight, S.L.4
-
184
-
-
77955986202
-
Physiological levels of TNFalpha stimulation induce stochastic dynamics of NF-kappaB responses in single living cells
-
Turner D.A., Paszek P., Woodcock D.J., Nelson D.E., Horton C.A., Wang Y., Spiller D.G., Rand D.A., White M.R., Harper C.V. Physiological levels of TNFalpha stimulation induce stochastic dynamics of NF-kappaB responses in single living cells. J. Cell Sci. 2010, 123:2834.
-
(2010)
J. Cell Sci.
, vol.123
, pp. 2834
-
-
Turner, D.A.1
Paszek, P.2
Woodcock, D.J.3
Nelson, D.E.4
Horton, C.A.5
Wang, Y.6
Spiller, D.G.7
Rand, D.A.8
White, M.R.9
Harper, C.V.10
-
185
-
-
0003903126
-
-
Springer-Verlag, Heidelberg
-
van Holde K.E. Chromatin 1988, Springer-Verlag, Heidelberg.
-
(1988)
Chromatin
-
-
van Holde, K.E.1
-
186
-
-
0025687584
-
Diurnal and ultradian rhythms in human endocrine function: a minireview
-
Van C.E. Diurnal and ultradian rhythms in human endocrine function: a minireview. Horm. Res. 1990, 34:45.
-
(1990)
Horm. Res.
, vol.34
, pp. 45
-
-
Van, C.E.1
-
188
-
-
32844454497
-
Origins of extrinsic variability in eukaryotic gene expression
-
Volfson D., Marciniak J., Blake W.J., Ostroff N., Tsimring L.S., Hasty J. Origins of extrinsic variability in eukaryotic gene expression. Nature 2006, 439:861.
-
(2006)
Nature
, vol.439
, pp. 861
-
-
Volfson, D.1
Marciniak, J.2
Blake, W.J.3
Ostroff, N.4
Tsimring, L.S.5
Hasty, J.6
-
189
-
-
65249185613
-
Combinatorial probabilistic chromatin interactions produce transcriptional heterogeneity
-
Voss T.C., Schiltz R.L., Sung M.H., Johnson T.A., John S., Hager G.L. Combinatorial probabilistic chromatin interactions produce transcriptional heterogeneity. J. Cell Sci. 2009, 122:345.
-
(2009)
J. Cell Sci.
, vol.122
, pp. 345
-
-
Voss, T.C.1
Schiltz, R.L.2
Sung, M.H.3
Johnson, T.A.4
John, S.5
Hager, G.L.6
-
190
-
-
80052000538
-
Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism
-
Voss T.C., Schiltz R.L., Sung M.H., Yen P.M., Stamatoyannopoulos J.A., Biddie S.C., Johnson T.A., Miranda T.B., John S., Hager G.L. Dynamic exchange at regulatory elements during chromatin remodeling underlies assisted loading mechanism. Cell 2011, 146:544.
-
(2011)
Cell
, vol.146
, pp. 544
-
-
Voss, T.C.1
Schiltz, R.L.2
Sung, M.H.3
Yen, P.M.4
Stamatoyannopoulos, J.A.5
Biddie, S.C.6
Johnson, T.A.7
Miranda, T.B.8
John, S.9
Hager, G.L.10
-
191
-
-
0033398513
-
Using inducible vectors to study intracellular trafficking of GFP-tagged steroid/nuclear receptors in living cells
-
Walker D., Htun H., Hager G.L. Using inducible vectors to study intracellular trafficking of GFP-tagged steroid/nuclear receptors in living cells. Methods (Companion Meth. Enzymol.) 1999, 19:386.
-
(1999)
Methods (Companion Meth. Enzymol.)
, vol.19
, pp. 386
-
-
Walker, D.1
Htun, H.2
Hager, G.L.3
-
192
-
-
0035951354
-
Evidence for the involvement of the GTS1 gene product in the regulation of biological rhythms in the continuous culture of the yeast Saccharomyces cerevisiae
-
Wang J., Liu W., Mitsui K., Tsurugi K. Evidence for the involvement of the GTS1 gene product in the regulation of biological rhythms in the continuous culture of the yeast Saccharomyces cerevisiae. FEBS Lett. 2001, 489:81.
-
(2001)
FEBS Lett.
, vol.489
, pp. 81
-
-
Wang, J.1
Liu, W.2
Mitsui, K.3
Tsurugi, K.4
-
193
-
-
77954505723
-
Intermittent parathyroid hormone administration counteracts the adverse effects of glucocorticoids on osteoblast and osteocyte viability, bone formation, and strength in mice
-
Weinstein R.S., Jilka R.L., Almeida M., Roberson P.K., Manolagas S.C. Intermittent parathyroid hormone administration counteracts the adverse effects of glucocorticoids on osteoblast and osteocyte viability, bone formation, and strength in mice. Endocrinology 2010, 151:2641.
-
(2010)
Endocrinology
, vol.151
, pp. 2641
-
-
Weinstein, R.S.1
Jilka, R.L.2
Almeida, M.3
Roberson, P.K.4
Manolagas, S.C.5
-
194
-
-
0028900378
-
Real-time analysis of the transcriptional regulation of HIV and hCMV promoters in single mammalian cells
-
White M.R., Masuko M., Amet L., Elliott G., Braddock M., Kingsman A.J., Kingsman S.M. Real-time analysis of the transcriptional regulation of HIV and hCMV promoters in single mammalian cells. J. Cell Sci. 1995, 108(Pt 2):441.
-
(1995)
J. Cell Sci.
, vol.108
, Issue.PART. 2
, pp. 441
-
-
White, M.R.1
Masuko, M.2
Amet, L.3
Elliott, G.4
Braddock, M.5
Kingsman, A.J.6
Kingsman, S.M.7
-
195
-
-
0018458970
-
The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence
-
Wu C., Bingham P.M., Livak K.J., Holmgren R., Elgin S.C. The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence. Cell 1979, 16:797.
-
(1979)
Cell
, vol.16
, pp. 797
-
-
Wu, C.1
Bingham, P.M.2
Livak, K.J.3
Holmgren, R.4
Elgin, S.C.5
-
196
-
-
0018359588
-
The chromatin structure of specific genes: II. Disruption of chromatin structure during gene activity
-
Wu C., Wong Y.C., Elgin S.C. The chromatin structure of specific genes: II. Disruption of chromatin structure during gene activity. Cell 1979, 16:807.
-
(1979)
Cell
, vol.16
, pp. 807
-
-
Wu, C.1
Wong, Y.C.2
Elgin, S.C.3
-
197
-
-
0030907634
-
Subnuclear trafficking of glucocorticoid receptors in vitro: chromatin recycling and nuclear export
-
Yang J., Liu J., DeFranco D.B. Subnuclear trafficking of glucocorticoid receptors in vitro: chromatin recycling and nuclear export. J. Cell Biol. 1997, 137:523.
-
(1997)
J. Cell Biol.
, vol.137
, pp. 523
-
-
Yang, J.1
Liu, J.2
DeFranco, D.B.3
-
198
-
-
37349099448
-
Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation
-
Yao J., Ardehali M.B., Fecko C.J., Webb W.W., Lis J.T. Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation. Mol. Cell 2007, 28:978.
-
(2007)
Mol. Cell
, vol.28
, pp. 978
-
-
Yao, J.1
Ardehali, M.B.2
Fecko, C.J.3
Webb, W.W.4
Lis, J.T.5
-
199
-
-
34547412828
-
Ultradian oscillations of Stat, Smad, and Hes1 expression in response to serum
-
Yoshiura S., Ohtsuka T., Takenaka Y., Nagahara H., Yoshikawa K., Kageyama R. Ultradian oscillations of Stat, Smad, and Hes1 expression in response to serum. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:11292.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 11292
-
-
Yoshiura, S.1
Ohtsuka, T.2
Takenaka, Y.3
Nagahara, H.4
Yoshikawa, K.5
Kageyama, R.6
-
200
-
-
36849063697
-
Dynamics of the hypoxia-inducible factor-1-vascular endothelial growth factor promoter complex
-
Yu P., Kodadek T. Dynamics of the hypoxia-inducible factor-1-vascular endothelial growth factor promoter complex. J. Biol. Chem. 2007, 282:35035.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 35035
-
-
Yu, P.1
Kodadek, T.2
-
201
-
-
77955174763
-
Single-allele analysis of transcription kinetics in living mammalian cells
-
Yunger S., Rosenfeld L., Garini Y., Shav-Tal Y. Single-allele analysis of transcription kinetics in living mammalian cells. Nat. Methods 2010, 7:631.
-
(2010)
Nat. Methods
, vol.7
, pp. 631
-
-
Yunger, S.1
Rosenfeld, L.2
Garini, Y.3
Shav-Tal, Y.4
-
202
-
-
0026093969
-
Ultradian oscillations in somatostatin and growth hormone-releasing hormone mRNAs in the brains of adult male rats
-
Zeitler P., Tannenbaum G.S., Clifton D.K., Steiner R.A. Ultradian oscillations in somatostatin and growth hormone-releasing hormone mRNAs in the brains of adult male rats. Proc. Natl. Acad. Sci. U. S. A. 1991, 88:8920.
-
(1991)
Proc. Natl. Acad. Sci. U. S. A.
, vol.88
, pp. 8920
-
-
Zeitler, P.1
Tannenbaum, G.S.2
Clifton, D.K.3
Steiner, R.A.4
-
203
-
-
57149101122
-
Single-RNA counting reveals alternative modes of gene expression in yeast
-
Zenklusen D., Larson D.R., Singer R.H. Single-RNA counting reveals alternative modes of gene expression in yeast. Nat. Struct. Mol. Biol. 2008, 15:1263.
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 1263
-
-
Zenklusen, D.1
Larson, D.R.2
Singer, R.H.3
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