Yeast communities associated with artisanal mezcal fermentations from Agave salmiana

Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology

Volumn 100, Issue 4, 2011, Pages 497-506

  Verdugo Valdez, A ^a   Segura Garcia, L ^b   Kirchmayr, M ^b   Ramirez Rodriguez P ^b   Gonzalez Esquinca A ^a   Coria, R ^c   Gschaedler Mathis, A ^b  

^a UNIVERSIDAD DE CIENCIAS Y ARTES DE CHIAPAS   (Mexico)

^b CENTRO DE INVESTIGACIÓN Y ASISTENCIA EN TECNOLOGÍA Y DISEÑO DEL ESTADO DE JALISCO   (Mexico)

^c INSTITUTO DE FISIOLOGÍA CELULAR   (Mexico)

Author keywords

DGGE; Fermentation process; Mezcal; RFLP; Yeast diversity

Indexed keywords

ALCOHOL; FRUCTAN; RESTRICTION ENDONUCLEASE; SUGAR; VOLATILE AGENT;

26S RRNA GENE; AGAVE; AGAVE SALMIANA; ARTICLE; BEVERAGE; CANDIDA; CANDIDA ETHANOLICA; CLAVISPORA LUSITANIAE; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; FERMENTATION TECHNIQUE; FUNGAL COLONIZATION; FUNGAL COMMUNITY; FUNGUS IDENTIFICATION; GENE SEQUENCE; KLUYVEROMYCES MARXIANUS; NONHUMAN; PICHIA; PICHIA KLUYVERI; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RNA GENE; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES EXIGUUS; SPECIES DIFFERENCE; TORULASPORA; ZYGOSACCHAROMYCES; ZYGOSACCHAROMYCES BAILII;

AGAVE; ALCOHOLIC BEVERAGES; DNA, FUNGAL; ETHANOL; FERMENTATION; MOLECULAR SEQUENCE DATA; MYCOLOGICAL TYPING TECHNIQUES; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RNA, RIBOSOMAL; YEASTS;

AGAVE SALMIANA; CANDIDA ETHANOLICA; CLAVISPORA LUSITANIAE; KLUYVEROMYCES MARXIANUS; PICHIA KLUYVERI; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES EXIGUUS; TORULASPORA DELBRUECKII; ZYGOSACCHAROMYCES BAILII;

EID: 80054122923     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-011-9605-y     Document Type: Article

References (55)

1. I Andorrà S Landi A Mas B Esteve-Zarzoso J Guillamón 2010 Effect of fermentation temperature on microbial population evolution using culture-independent and dependent techniques Food Res Int 43 773 779 10.1016/j.foodres.2009.11.014
2. J Arrizon A Gschaedler 2007 Effects of the addition of different nitrogen sources in the tequila fermentation process at high sugar concentration J Appl Microbiol 102 1123 1131 17381756 1:CAS:528:DC%2BD2sXltFKhtLc%3D (Pubitemid 46457468)
3. JP Arrizon C Fiore G Acosta P Romano A Gschaedler 2006 Fermentation behaviour and volatile production by agave and grape must yeasts in high sugar and grape must fermentations Antonie van Leeuwenhoek 8 181 189 10.1007/s10482-005-9022-1
4. N Ben Omar F Ampe 2000 Microbial community dynamics during production of the fermented maize dough pozol Appl Environ Microbiol 66 3664 3673 10966374 10.1128/AEM.66.9.3664-3673.2000 1:CAS:528:DC%2BD3cXmsVWqtbY%3D
5. LA Cira GA González JC Torres C Pelayo M Gutiérrez J Ramírez 2008 Heterologous expression of Fusarium oxysporum tomatinase in Saccharomyces cerevisiae increases its resistance to saponins and improves ethanol production during the fermentation of Agave tequilana Weber var. azul and Agave salmiana must Antonie van Leeuwenhoek 93 259 266 17896184 10.1007/s10482-007-9200-4 1:CAS:528:DC%2BD1cXhtFelu7o%3D (Pubitemid 351167821)
6. A Clavijo IL Calderón P Paneque 2010 Diversity of Saccharomyces and non-Saccharomyces yeasts in three red grape varieties cultured in the Serranía de Ronda (Spain) vine-growing región Int J Food Microbiol 143 241 245 20851489 10.1016/j.ijfoodmicro.2010.08.010 1:CAS:528: DC%2BC3cXht1CmurbL
7. L Cocolin A Heisey DA Mills 2001 Direct identification of the indigenous yeast in commercial wine fermentations Am J Enol Viticul 52 49 53 1:CAS:528:DC%2BD3MXmtVyrtL4%3D (Pubitemid 32696290)
8. L Cocolin A Manzano S Rebecca G Comi 2002 Monitoring of yeast population changes during a continuous wine fermentation by molecular methods Am J Enol Viticul 53 24 27 (Pubitemid 34553906)
9. L Cocolin R Urso K Rantsiou C Cantoni G Comi 2006 Dynamics and characterization of yeasts during natural fermentation of Italian sausages FEMS Yeasts Res 6 692 701 10.1111/j.1567-1364.2006.00050.x 1:CAS:528: DC%2BD28Xotlymsbg%3D (Pubitemid 44049989)
10. M Combina A Elía L Mercado C Catania A Ganga C Martinez 2005 Dynamics of indigenous yeast population during spontaneous fermentation of wines form Mendoza, Argentina Int J Food Microbiol 99 237 243 15808358 10.1016/j.ijfoodmicro.2004.08.017 1:CAS:528:DC%2BD2MXivV2htbo%3D (Pubitemid 40460334)
11. G Cordero-Bueso T Arroyo A Serrano J Tello I Aporta MA Vélez E Valero 2011 Influence of the farming system and vine variety on yeast communities associated with grape berries Int J Food Microbiol 99 237 243
12. H Csoma N Zakany A Capece P Romano M Sipiczki 2010 Biological diversity of Saccharomyces yeasts of spontaneously fermenting wines in four wine regions: Comparative genotypic and phenotypic analysis Int J Food Microbiol 140 239 248 20413169 10.1016/j.ijfoodmicro.2010.03.024 1:CAS:528:DC%2BC3cXmvVWmtLw%3D
13. A De León-Rodríguez L González-Hernández AP Barba de la Rosa P Escalante-Minakata MG López 2006 Characterization of volatile compounds of mezcal, an ethnic alcoholic beverage obtained from Agave salmiana J Agri Food Chem 54 1337 1341 10.1021/jf052154+ (Pubitemid 43374227)
14. A De León-Rodríguez P Escalante-Minakata AP Barba de la Rosa HP Blaschek 2008 Optimization of fermentation conditions for the production of the mezcal from Agave salmiana using response surface methodology Eng Process 47 76 82 10.1016/j.cep.2007.08.010 (Pubitemid 47625692)
15. L De Vuyst G Vrancken F Ravyts T Rimaux S Weckx 2009 Biodiversity, ecological determinants, and metabolic exploitation of sourdough microbiota Food Microbiol 26 666 675 19747599 10.1016/j.fm.2009.07.012
16. P Dolci V Alessandria K Rantsiou L Rolle G Zeppa L Cocolin 2008 Microbial dynamics of Castelmagno PDO, a traditional Italian cheese, with a focus on lactic acid bacteria ecology Int J Food Microbiol 122 302 311 18272246 10.1016/j.ijfoodmicro.2007.12.018 1:CAS:528:DC%2BD1cXislKmu7g%3D
17. P Escalante-Minakata HP Blaschek AP Barba de la Rosa L Santos A León-Rodríguez 2008 Identification of yeast and bacteria involved in the mezcal fermentation of Agave salmiana Lett Appl Microbiol 46 626 630 10.1111/j.1472-765X.2008.02359.x 1:CAS:528:DC%2BD1cXotFeiu74%3D (Pubitemid 351703897)
18. B Esteve-Zarzoso C Belloch F Uruburu A Querol 1999 Identification of yeasts by RFLP análisis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers Int J System Bacteriol 49 329 337 10.1099/00207713-49-1-329 1:CAS:528:DyaK1MXosF2ltg%3D%3D (Pubitemid 29225895)
19. G Fleet 2003 Yeast interactions and wine flavour Int J Food Microbiol 86 11 22 12892919 10.1016/S0168-1605(03)00245-9 1:CAS:528:DC%2BD3sXlvVCqtr4%3D (Pubitemid 36903279)
20. GG Fonseca E Heinzle C Wittmann AK Gombert 2008 The yeast Kluyveromyces marxianus and its biotechnological potential Appl Microbiol Biotechnol 79 339 354 18427804 10.1007/s00253-008-1458-6 1:CAS:528:DC%2BD1cXlvF2ku7w%3D
21. García Mendoza A (1998) Con sabor a maguey: Guía de la colección nacional de Agavaceas y Nolináceas del jardín botánico. Instituto de Biología-Universidad Nacional Autónoma de México, México
22. SS González E Barrio A Querol 2006 Molecular identification and characterization of wine yeasts isolated from Tenerife (Canary Island, Spain) J Appl Microbiol 102 1018 1025
23. TW Kim JH Lee SE Kim MH Park HC Chang HY Kim 2009 Analysis of microbial communities in doenjang, a Korean fermented soybean paste, using nested PCR-denaturing gradient gel electrophoresis Int J Food Microbiol 131 265 271 19324443 10.1016/j.ijfoodmicro.2009.03.001 1:CAS:528:DC%2BD1MXkslygur8%3D
24. CP Kurtzman CJ Robnett 1998 Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial subunit Antonie van Leeuwenhoek 73 331 371 9850420 10.1023/A:1001761008817 1:CAS:528:DyaK1MXjtFOjsg%3D%3D (Pubitemid 28528723)
25. C Lacerda Ramos E Gonzaga de Almeida GV De Melo Pereira P Gomes Cardoso E Souza Dias R Freitas Schwan 2010 Determination of dynamic characteristics of microbiota in a fermented beverage produced by Brazilian Amerindians using culture-dependent and culture-independent methods Int J Food Microbiol 140 225 231 10.1016/j.ijfoodmicro.2010.03.029
26. MA Lachance 1995 Yeast communities in a natural tequila fermentation Antonie van Leeuwenhoek 68 151 160 8546452 10.1007/BF00873100 1:STN:280:DyaK28%2Fotl2isQ%3D%3D
27. Lappe P, Ulloa M (1993) Microbiologia del Pulque. In: Wacher MC, Lappe P (eds) Alimentos fermentados indígenas de México. Universidad Nacional Autónoma de México, México, pp 75-80
28. P Lappe-Oliveiras R Moreno-Terrazas J Arrizon-Gaviño T Herrera-Suarez A García-Mendoza A Gschaedler-Mathis 2008 Yeasts associated with the production of Mexican alcoholic non-distilled and distilled Agave beverages FEMS Yeast Res 8 1037 1052 10.1111/j.1567-1364.2008.00430.x
29. T Lefeber W Gobert G Vrancken N Camu L De Vuyst 2011 Dynamics and species diversity of communities of lactic acid bacteria and acetic acid bacteria during spontaneous cocoa bean fermentation in vessels Food Microbiol 28 457 464 21356451 10.1016/j.fm.2010.10.010 1:CAS:528:DC%2BC3MXis1Cls78%3D
30. S Li Ch Cheng Z Li J Chen B Yan B Han M Reeves 2010 Yeast species associated with wine grapes in China Int J Food Microbiol 138 85 90 20116124 10.1016/j.ijfoodmicro.2010.01.009 1:CAS:528:DC%2BC3cXisFeisL4%3D
31. CB Meroth WP Hammes C Hertel 2003 Identification and population dynamics of yeasts in sourdough fermentation processes by PCR-denaturing gradient gel electrophoresis Appl Environ Microbiol 69 7453 7461 14660398 10.1128/AEM.69.12.7453-7461.2003 1:CAS:528:DC%2BD3sXpvFClsbY%3D (Pubitemid 38585401)
32. Mexican Ministry of Commerce and Industry (1994) Regulations: NOM-070-SCFI-1994. Alcoholic drinks-Mezcal Specifications. Diario Oficial de la Federación: México
33. GL Miller 1959 Use of dinitrosalicylic acid reagent for determination of reducing sugar Anal Chem 31 426 428 10.1021/ac60147a030 1:CAS:528: DyaG1MXmtFKiuw%3D%3D
34. DA Mills EA Johannsen L Cocolin 2002 Yeast diversity and persistence in botrytis affected wine fermentations Appl Environ Microbiol 68 4884 4893 12324335 10.1128/AEM.68.10.4884-4893.2002 1:CAS:528:DC%2BD38XnvFCltb0%3D (Pubitemid 35154796)
35. M Miyakoshi H Masuda K Mizutani O Tanaka T Ikeda K Ohtani R Kasai K Yamasaki 2000 Antiyeast steroidal saponins from Yucca shidigera (Mohave Yucca), a new anti-food-deteriorating agent J Nat Prod 63 332 338 10757713 10.1021/np9904354 1:CAS:528:DC%2BD3cXht1KjsLs%3D (Pubitemid 30173688)
36. AV Moroni EK Arendt F Dal Bello 2011 Biodiversity of lactic acid bacteria and yeasts in spontaneously-fermented buckwheat and teff sourdoughs Food Microbiol 28 497 502 21356457 10.1016/j.fm.2010.10.016
37. JA Narváez-Zapata RA Rojas Herrera IC Rodríguez-Luna CP Larralde-Corona 2010 Culture-independent analysis of lactic acid bacteria diversity associated with mezcal fermentation Curr Microbiol 61 444 450 20383505 10.1007/s00284-010-9636-z
38. DS Nielsen S Hønholt K Tano-Debrah L Jespersen 2005 Yeast populations associated with Ghanaian cocoa fermentations analyzed using denaturing gradient gel electrophoresis (DGGE) Yeast 22 271 284 15704234 10.1002/yea.1207 1:CAS:528:DC%2BD2MXjsVals7Y%3D (Pubitemid 40520826)
39. P Nissen D Nielsen N Arneborg 2003 Viable Saccharomyces cerevisiae cells at high concentration cause early growth arrest of non-Saccharomyces yeast in mixed cultures by cell a cell contact-mediated mechanism Yeast 20 331 341 12627399 10.1002/yea.965 1:CAS:528:DC%2BD3sXit1Wgtb4%3D (Pubitemid 36335922)
40. M Obodai CER Dodd 2006 Characterization of dominant microbiota of a Ghanaian fermented milk product, nyarmie, by culture- and non culture-based methods J Appl Microbiol 100 1355 1363 16696684 10.1111/j.1365-2672.2006.02895.x 1:STN:280:DC%2BD283mvVOgsw%3D%3D (Pubitemid 43725700)
41. E Ocón AR Gutiérrez P Garijo R López P Santamaría 2010 Presence of non-Saccharomyces yeasts in cellar equipment and grape juice during harvest time Food Micribiol 27 1023 1027 10.1016/j.fm.2010.06.012
42. A Oelofse A Lonvaud-Funel M Du Toit 2009 Molecular identification of Brettanomyces bruxellensis strain isolated from red wines and volatile phenol production Food Microbiol 30 1 9
43. CL Pallmann JA Brown TL Olineka L Cocolin DA Mills LF Bisson 2001 Use of WL medium to profile native flora fermentations Am J Enol Viticult 53 198 203 (Pubitemid 34067343)
44. D Pérez-Brito R Tapia-Tussell A Quijano-Ramayo A Larqué-Saavedra P Lappe 2007 Molecular characterization of Kluyveromyces marxianus strains isolated from Agave fourcroydes (Lem.) in Yucatan, Mexico Mol Biotechnol 37 181 186 17952662 10.1007/s12033-007-0036-y (Pubitemid 350242554)
45. F Pérez-Nevado H Albergaria T Hogg F Girio 2006 Cellular death of two non-Saccharomyces wine-related yeasts during mixed fermentations with Saccharomyces cerevisiae Int J Food Microbiol 108 336 345 16564103
46. CJ Prakitchaiwattana G Fleet GM Heard 2004 Application and evaluation of denaturing gradient gel electrophoresis to analyse the yeast ecology of wine grapes FEMS Yeast Res 4 865 877 15450194 10.1016/j.femsyr.2004.05.004 1:CAS:528:DC%2BD2cXmvFCls7k%3D (Pubitemid 39144378)
47. K Rantsiou L Cocolin 2006 New developments in the study of the microbiota of naturally fermented sausages as determined by molecular methods: a review Int J Food Microbiol 108 255 267 16481061 10.1016/j.ijfoodmicro.2005.11.013 1:CAS:528:DC%2BD28XjtFCrtb8%3D
48. K Rantsiou R Urso L Iacumin C Cantoni P Cattaneo G Comi L Cocolin 2005 Culture-dependent and -independent methods to investigate the microbial ecology of Italian fermented sausages Appl Environ Microbiol 71 1977 1986 15812029 10.1128/AEM.71.4.1977-1986.2005 1:CAS:528:DC%2BD2MXjsVOquro%3D (Pubitemid 40546121)
49. V Renouf O Claisse A Lonvaud-Funel 2007 Inventory and monitoring of wine microbial consortia Appl Microbiol Biotechnol 75 149 164 17235561 10.1007/s00253-006-0798-3 1:CAS:528:DC%2BD2sXks1ahurY%3D (Pubitemid 46669225)
50. P Romano C Fiore M Parragio M Caruso A Capece 2003 Function of yeast species and strains in wine flavour Int J Food Microbiol 86 169 180 12892932 10.1016/S0168-1605(03)00290-3 1:CAS:528:DC%2BD3sXlvVCqt70%3D (Pubitemid 36900416)
51. R Tofalo C Chaves-López F Di Fabio M Schirone GE Felis S Torriani A Paparella G Suzzi 2009 Molecular identification and osmotolerant profile of wine yeasts that ferment a high sugar grape must Int J Food Microbiol 130 179 187 19230999 10.1016/j.ijfoodmicro.2009.01.024 1:CAS:528:DC%2BD1MXjt1Knsr0%3D
52. RJ Tu HY Wu YS Lock MJ Chen 2010 Evaluation of microbial dynamics during the ripening of a traditional Taiwanese naturally fermented ham Food Microbiol 27 460 467 20417394 10.1016/j.fm.2009.12.011 1:CAS:528:DC%2BC3cXlt1Cltb0%3D
53. R Urso K Rantsiou P Dolci L Rolle G Comi L Cocolin 2008 Yeast biodiversity and dynamics during sweet wine production as determined by molecular methods FEMS Yeast Res 8 1053 1062 18341578 10.1111/j.1567-1364.2008. 00364.x 1:CAS:528:DC%2BD1cXhtlyqsr3E
54. P,C,BI Zamora F,JR Juárez R,D Aguirre P,CI Ortiz H,G Godínez F Álvarez 2010 Variación de la concentración de azúcares y saponinas durante la cocción del maguey mezcalero potosino e-Gnosis [online] 8 1 11
55. K Zott C Miot-Sertier O Claisse I Masneuf-Pomarede A Lonvaud-Funel 2008 Dynamics and diversity of non-Saccharomyces yeasts during the early stages in winemaking Int J Food Microbiol 125 197 203 18495281 10.1016/j.ijfoodmicro.2008. 04.001 1:CAS:528:DC%2BD1cXnvVyht7s%3D