-
1
-
-
59149092918
-
13C-tracer study of storage carbohydrate pools in aerobic glucose-limited Saccharomyces cerevisiae confirms a rapid steady-state turnover and fast mobilization during a modest stepup in the glucose uptake rate
-
10.1111/j.1567-1364.2008.00465.x 1:CAS:528:DC%2BD1MXisFCqu74%3D
-
13C-tracer study of storage carbohydrate pools in aerobic glucose-limited Saccharomyces cerevisiae confirms a rapid steady-state turnover and fast mobilization during a modest stepup in the glucose uptake rate FEMS Yeast Res 9 2 191 201 10.1111/j.1567-1364.2008.00465.x 1:CAS:528:DC%2BD1MXisFCqu74%3D
-
(2009)
FEMS Yeast Res
, vol.9
, Issue.2
, pp. 191-201
-
-
Aboka, F.O.1
Heijnen, J.J.2
Van Winden, W.A.3
-
3
-
-
68249110203
-
Metabolic flux analysis in plants: Coping with complexity
-
10.1111/j.1365-3040.2009.01992.x 1:CAS:528:DC%2BD1MXhtFGhtrfJ
-
DK Allen IGL Libourel Y Shachar-Hill 2009 Metabolic flux analysis in plants: coping with complexity Plant Cell Environ 32 9 1241 1257 10.1111/j.1365-3040.2009.01992.x 1:CAS:528:DC%2BD1MXhtFGhtrfJ
-
(2009)
Plant Cell Environ
, vol.32
, Issue.9
, pp. 1241-1257
-
-
Allen, D.K.1
Libourel, I.G.L.2
Shachar-Hill, Y.3
-
4
-
-
33745155105
-
Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements
-
DOI 10.1016/j.ymben.2006.01.004, PII S1096717606000061
-
MR Antoniewicz JK Kelleher G Stephanopoulos 2006 Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements Metab Eng 8 4 324 337 10.1016/j.ymben.2006.01.004 1:CAS:528:DC%2BD28XlvFGqsb0%3D (Pubitemid 43903302)
-
(2006)
Metabolic Engineering
, vol.8
, Issue.4
, pp. 324-337
-
-
Antoniewicz, M.R.1
Kelleher, J.K.2
Stephanopoulos, G.3
-
5
-
-
33845679072
-
Elementary metabolite units (EMU): A novel framework for modeling isotopic distributions
-
DOI 10.1016/j.ymben.2006.09.001, PII S109671760600084X
-
MR Antoniewicz JK Kelleher G Stephanopoulos 2007 Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions Metab Eng 9 1 68 86 10.1016/j.ymben.2006.09.001 1:CAS:528:DC%2BD2sXht1Chug%3D%3D (Pubitemid 44960874)
-
(2007)
Metabolic Engineering
, vol.9
, Issue.1
, pp. 68-86
-
-
Antoniewicz, M.R.1
Kelleher, J.K.2
Stephanopoulos, G.3
-
6
-
-
0001296314
-
Transport, compartmentation, and metabolism of homoserine in higher plant cells. Carbon-13- and phosphorus-31-nuclear magnetic resonance studies
-
S Aubert G Curien R Bligny E Gout R Douce 1998 Transport, compartmentation, and metabolism of homoserine in higher plant cells. Carbon-13- and phosphorus-31-nuclear magnetic resonance studies Plant Physiol 116 2 547 557 1:CAS:528:DyaK1cXht1aju78%3D (Pubitemid 128482281)
-
(1998)
Plant Physiology
, vol.116
, Issue.2
, pp. 547-557
-
-
Aubert, S.1
Curien, G.2
Bligny, R.3
Gout, E.4
Douce, R.5
-
7
-
-
0032909840
-
13C-NMR study
-
DOI 10.1046/j.1365-3040.1999.00421.x
-
S Aubert F Hennion A Bouchereau E Gout R Bligny AJ Dorne 1999 Subcellular compartmentation of proline in the leaves of the subantarctic Kerguelen cabbage Pringlea antiscorbutica R-Br. in vivo C-13-NMR study Plant Cell Environ 22 3 255 259 1:CAS:528:DyaK1MXjt1WrurY%3D (Pubitemid 29194625)
-
(1999)
Plant, Cell and Environment
, vol.22
, Issue.3
, pp. 255-259
-
-
Aubert, S.1
Hennion, F.2
Bouchereau, A.3
Gout, E.4
Bligny, R.5
Dorne, A.-J.6
-
8
-
-
68049100110
-
Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
-
10.1038/Nchembio.186 1:CAS:528:DC%2BD1MXnslKqtLc%3D
-
BD Bennett EH Kimball M Gao R Osterhout SJ Van Dien JD Rabinowitz 2009 Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli Nat Chem Biol 5 8 593 599 10.1038/Nchembio.186 1:CAS:528:DC%2BD1MXnslKqtLc%3D
-
(2009)
Nat Chem Biol
, vol.5
, Issue.8
, pp. 593-599
-
-
Bennett, B.D.1
Kimball, E.H.2
Gao, M.3
Osterhout, R.4
Van Dien, S.J.5
Rabinowitz, J.D.6
-
9
-
-
77952891125
-
Metabolic flux distributions: Genetic information, computational predictions, and experimental validation
-
10.1007/s00253-010-2506-6 1:CAS:528:DC%2BC3cXkslarsr4%3D
-
LM Blank L Kuepfer 2010 Metabolic flux distributions: genetic information, computational predictions, and experimental validation Appl Microbiol Biotechnol 86 5 1243 1255 10.1007/s00253-010-2506-6 1:CAS:528:DC%2BC3cXkslarsr4%3D
-
(2010)
Appl Microbiol Biotechnol
, vol.86
, Issue.5
, pp. 1243-1255
-
-
Blank, L.M.1
Kuepfer, L.2
-
10
-
-
34249088019
-
Sampling for metabolome analysis of microorganisms
-
DOI 10.1021/ac0623888
-
CJ Bolten P Kiefer F Letisse JC Portais C Wittmann 2007 Sampling for metabolome analysis of microorganisms Anal Chem 79 10 3843 3849 10.1021/ac0623888 1:CAS:528:DC%2BD2sXjvFKgtr0%3D (Pubitemid 46799081)
-
(2007)
Analytical Chemistry
, vol.79
, Issue.10
, pp. 3843-3849
-
-
Bolten, C.J.1
Kiefer, P.2
Letisse, F.3
Portais, J.-C.4
Wittmann, C.5
-
11
-
-
78449311334
-
Evaluation of peak picking quality in LC-MS metabolomics data
-
10.1021/ac101216e 1:CAS:528:DC%2BC3cXhtleitbrO
-
L Brodsky A Moussaieff N Shahaf A Aharoni I Rogachev 2010 Evaluation of peak picking quality in LC-MS metabolomics data Anal Chem 82 22 9177 9187 10.1021/ac101216e 1:CAS:528:DC%2BC3cXhtleitbrO
-
(2010)
Anal Chem
, vol.82
, Issue.22
, pp. 9177-9187
-
-
Brodsky, L.1
Moussaieff, A.2
Shahaf, N.3
Aharoni, A.4
Rogachev, I.5
-
12
-
-
51649104270
-
Leakage-free rapid quenching technique for yeast metabolomics
-
10.1007/s11306-008-0116-4 1:CAS:528:DC%2BD1cXhtVyis7bO
-
AB Canelas C Ras A ten Pierick JC van Dam JJ Heijnen WM Van Gulik 2008 Leakage-free rapid quenching technique for yeast metabolomics Metabolomics 4 3 226 239 10.1007/s11306-008-0116-4 1:CAS:528:DC%2BD1cXhtVyis7bO
-
(2008)
Metabolomics
, vol.4
, Issue.3
, pp. 226-239
-
-
Canelas, A.B.1
Ras, C.2
Ten Pierick, A.3
Van Dam, J.C.4
Heijnen, J.J.5
Van Gulik, W.M.6
-
13
-
-
69749110125
-
Quantitative evaluation of intracellular metabolite extraction techniques for yeast metabolomics
-
10.1021/ac900999t 1:CAS:528:DC%2BD1MXptlelt7Y%3D
-
AB Canelas A ten Pierick C Ras RM Seifar JC van Dam WM van Gulik JJ Heijnen 2009 Quantitative evaluation of intracellular metabolite extraction techniques for yeast metabolomics Anal Chem 81 17 7379 7389 10.1021/ac900999t 1:CAS:528:DC%2BD1MXptlelt7Y%3D
-
(2009)
Anal Chem
, vol.81
, Issue.17
, pp. 7379-7389
-
-
Canelas, A.B.1
Ten Pierick, A.2
Ras, C.3
Seifar, R.M.4
Van Dam, J.C.5
Van Gulik, W.M.6
Heijnen, J.J.7
-
14
-
-
38049129627
-
Rates of chilling to 0 degrees C: Implications for the survival of microorganisms and relationship with membrane fluidity modifications
-
10.1007/s00253-007-1279-z 1:CAS:528:DC%2BD1cXhsFSjt7g%3D
-
L Cao-Hoang F Dumont PA Marechal M Le-Thanh P Gervais 2008 Rates of chilling to 0 degrees C: implications for the survival of microorganisms and relationship with membrane fluidity modifications Appl Microbiol Biotechnol 77 6 1379 1387 10.1007/s00253-007-1279-z 1:CAS:528:DC%2BD1cXhsFSjt7g%3D
-
(2008)
Appl Microbiol Biotechnol
, vol.77
, Issue.6
, pp. 1379-1387
-
-
Cao-Hoang, L.1
Dumont, F.2
Marechal, P.A.3
Le-Thanh, M.4
Gervais, P.5
-
15
-
-
28244476895
-
Oxygen-limited fed-batch process: An alternative control for Pichia pastoris recombinant protein processes
-
DOI 10.1007/s00449-005-0005-4
-
T Charoenrat M Ketudat-Cairns H Stendahl-Andersen M Jahic SO Enfors 2005 Oxygen-limited fed-batch process: an alternative control for Pichia pastoris recombinant protein processes Bioprocess Biosyst Eng 27 6 399 406 10.1007/s00449-005-0005-4 1:CAS:528:DC%2BD2MXht1CqtL7N (Pubitemid 41703284)
-
(2005)
Bioprocess and Biosystems Engineering
, vol.27
, Issue.6
, pp. 399-406
-
-
Charoenrat, T.1
Ketudat-Cairns, M.2
Stendahl-Andersen, H.3
Jahic, M.4
Enfors, S.-O.5
-
17
-
-
77950630496
-
From fluxes and isotope labeling patterns towards in silico cells
-
10.1016/j.copbio.2010.01.014 1:CAS:528:DC%2BC3cXjslSjtbk%3D
-
M Dauner 2010 From fluxes and isotope labeling patterns towards in silico cells Curr Opin Biotechnol 21 1 55 62 10.1016/j.copbio.2010.01.014 1:CAS:528:DC%2BC3cXjslSjtbk%3D
-
(2010)
Curr Opin Biotechnol
, vol.21
, Issue.1
, pp. 55-62
-
-
Dauner, M.1
-
19
-
-
0038606003
-
Production process monitoring by serial mapping of microbial carbon flux distributions using a novel sensor reactor approach: I - Sensor reactor system
-
DOI 10.1016/S1096-7176(03)00004-1
-
M El Massaoudi J Spelthahn A Drysch A de Graaf R Takors 2003 Production process monitoring by serial mapping of microbial carbon flux distributions using a novel Sensor Reactor approach: I-sensor reactor system Metab Eng 5 2 86 95 (Pubitemid 36837552)
-
(2003)
Metabolic Engineering
, vol.5
, Issue.2
, pp. 86-95
-
-
El Massaoudi, M.1
Spelthahn, J.2
Drysch, A.3
De Graaf, A.4
Takors, R.5
-
20
-
-
77954595080
-
Isotopologue profiling of Legionella pneumophila-role of serine and glucose as carbon substrates
-
10.1074/jbc.M110.128678 1:CAS:528:DC%2BC3cXos1Wnsb0%3D
-
E Eylert V Herrmann M Jules N Gillmaier M Lautner C Buchrieser W Eisenreich K Heuner 2010 Isotopologue profiling of Legionella pneumophila-role of serine and glucose as carbon substrates J Biol Chem 285 29 22232 22243 10.1074/jbc.M110.128678 1:CAS:528:DC%2BC3cXos1Wnsb0%3D
-
(2010)
J Biol Chem
, vol.285
, Issue.29
, pp. 22232-22243
-
-
Eylert, E.1
Herrmann, V.2
Jules, M.3
Gillmaier, N.4
Lautner, M.5
Buchrieser, C.6
Eisenreich, W.7
Heuner, K.8
-
21
-
-
0036526245
-
13C labeling and NMR spectroscopy
-
DOI 10.1006/mben.2001.0209
-
S Flores G Gosset N Flores AA de Graaf F Bolivar 2002 Analysis of carbon metabolism in Escherichia coli strains with an inactive phosphotransferase system by C-13 labeling and NMR spectroscopy Metab Eng 4 2 124 137 10.1006/mben.2001.0209 1:CAS:528:DC%2BD38XjsFOht7s%3D (Pubitemid 35002950)
-
(2002)
Metabolic Engineering
, vol.4
, Issue.2
, pp. 124-137
-
-
Flores, S.1
Gosset, G.2
Flores, N.3
De Graaf, A.A.4
Bolivar, F.5
-
22
-
-
45849153463
-
Separation and mass spectrometry in microbial metabolomics
-
10.1016/j.mib.2008.04.002 1:CAS:528:DC%2BD1cXotlOjtb0%3D
-
DE Garcia EE Baidoo PI Benke F Pingitore YJ Tang S Villa JD Keasling 2008 Separation and mass spectrometry in microbial metabolomics Curr Opin Microbiol 11 3 233 239 10.1016/j.mib.2008.04.002 1:CAS:528:DC%2BD1cXotlOjtb0%3D
-
(2008)
Curr Opin Microbiol
, vol.11
, Issue.3
, pp. 233-239
-
-
Garcia, D.E.1
Baidoo, E.E.2
Benke, P.I.3
Pingitore, F.4
Tang, Y.J.5
Villa, S.6
Keasling, J.D.7
-
23
-
-
34249896946
-
13C isotopic enrichment of valine and threonine by GC-C-IRMS after formation of the N(O,S)-ethoxycarbonyl ethyl ester derivatives of the amino acids
-
DOI 10.1007/s00216-007-1275-2, Vapor Generation for Atomic Spectroscopy
-
JP Godin M Faure D Breuille G Hopfgartner LB Fay 2007 Determination of C-13 isotopic enrichment of valine and threonine by GC-C-IRMS after formation of the N(O, S)-ethoxycarbonyl ethyl ester derivatives of the amino acids Anal Bioanal Chem 388 4 909 918 10.1007/s00216-007-1275-2 1:CAS:528: DC%2BD2sXmvVGhurk%3D (Pubitemid 46870690)
-
(2007)
Analytical and Bioanalytical Chemistry
, vol.388
, Issue.4
, pp. 909-918
-
-
Godin, J.-P.1
Faure, M.2
Breuille, D.3
Hopfgartner, G.4
Fay, L.-B.5
-
26
-
-
77649255304
-
Metabolic turnover analysis by a combination of in vivo C-13-labelling from CO2-C-13 and metabolic profiling with CE-MS/MS reveals rate-limiting steps of the C-3 photosynthetic pathway in Nicotiana tabacum leaves
-
10.1093/Jxb/Erp374 1:CAS:528:DC%2BC3cXis1Wgu7o%3D
-
T Hasunuma K Harada SI Miyazawa A Kondo E Fukusaki C Miyake 2010 Metabolic turnover analysis by a combination of in vivo C-13-labelling from CO2-C-13 and metabolic profiling with CE-MS/MS reveals rate-limiting steps of the C-3 photosynthetic pathway in Nicotiana tabacum leaves J Exp Bot 61 4 1041 1051 10.1093/Jxb/Erp374 1:CAS:528:DC%2BC3cXis1Wgu7o%3D
-
(2010)
J Exp Bot
, vol.61
, Issue.4
, pp. 1041-1051
-
-
Hasunuma, T.1
Harada, K.2
Miyazawa, S.I.3
Kondo, A.4
Fukusaki, E.5
Miyake, C.6
-
27
-
-
80052644981
-
Impact of thermodynamic principles in systems biology
-
10.1007/10-2009-63 1:CAS:528:DC%2BC3cXhtlWjt77J
-
JJ Heijnen 2010 Impact of thermodynamic principles in systems biology Adv Biochem Eng Biotechnol 121 139 162 10.1007/10-2009-63 1:CAS:528: DC%2BC3cXhtlWjt77J
-
(2010)
Adv Biochem Eng Biotechnol
, vol.121
, pp. 139-162
-
-
Heijnen, J.J.1
-
28
-
-
77955169879
-
Nontargeted elucidation of metabolic pathways using stable-isotope tracers and mass spectrometry
-
10.1021/ac1011574 1:CAS:528:DC%2BC3cXosVyjsLw%3D
-
K Hiller CM Metallo JK Kelleher G Stephanopoulos 2010 Nontargeted elucidation of metabolic pathways using stable-isotope tracers and mass spectrometry Anal Chem 82 15 6621 6628 10.1021/ac1011574 1:CAS:528: DC%2BC3cXosVyjsLw%3D
-
(2010)
Anal Chem
, vol.82
, Issue.15
, pp. 6621-6628
-
-
Hiller, K.1
Metallo, C.M.2
Kelleher, J.K.3
Stephanopoulos, G.4
-
30
-
-
0037908691
-
Metabolic isotopomer labeling systems. Part II: Structural flux identifiability analysis
-
DOI 10.1016/S0025-5564(02)00222-5
-
N Isermann W Wiechert 2003 Metabolic isotopomer labeling systems: part II. Structural flux identifiability analysis Math Biosci 183 2 175 214 1:CAS:528:DC%2BD3sXjtVCqsbs%3D (Pubitemid 36597451)
-
(2003)
Mathematical Biosciences
, vol.183
, Issue.2
, pp. 175-214
-
-
Isermann, N.1
Wiechert, W.2
-
31
-
-
34247612307
-
Multiple high-throughput analyses monitor the response of E. coli to perturbations
-
DOI 10.1126/science.1132067
-
N Ishii K Nakahigashi T Baba M Robert T Soga A Kanai T Hirasawa M Naba K Hirai A Hoque PY Ho Y Kakazu K Sugawara S Igarashi S Harada T Masuda N Sugiyama T Togashi M Hasegawa Y Takai K Yugi K Arakawa N Iwata Y Toya Y Nakayama T Nishioka K Shimizu H Mori M Tomita 2007 Multiple high-throughput analyses monitor the response of E. coli to perturbations Science 316 5824 593 597 10.1126/science.1132067 1:CAS:528:DC%2BD2sXksFeksbw%3D (Pubitemid 46683144)
-
(2007)
Science
, vol.316
, Issue.5824
, pp. 593-597
-
-
Ishii, N.1
Nakahigashi, K.2
Baba, T.3
Robert, M.4
Soga, T.5
Kanai, A.6
Hirasawa, T.7
Naba, M.8
Hirai, K.9
Hoque, A.10
Ho, P.Y.11
Kakazu, Y.12
Sugawara, K.13
Igarashi, S.14
Harada, S.15
Masuda, T.16
Sugiyama, N.17
Togashi, T.18
Hasegawa, M.19
Takai, Y.20
Yugi, K.21
Arakawa, K.22
Iwata, N.23
Toya, Y.24
Nakayama, Y.25
Nishioka, T.26
Shimizu, K.27
Mori, H.28
Tomita, M.29
more..
-
32
-
-
33845675054
-
Determination of metabolic flux changes during fed-batch cultivation from measurements of intracellular amino acids by LC-MS/MS
-
DOI 10.1016/j.jbiotec.2006.09.004, PII S0168165606007577
-
S Iwatani S Van Dien K Shimbo K Kubota N Kageyama D Iwahata H Miyano K Hirayama Y Usuda K Shimizu K Matsui 2007 Determination of metabolic flux changes during fed-batch cultivation from measurements of intracellular amino acids by LC-MS/MS J Biotechnol 128 1 93 111 10.1016/j.jbiotec.2006.09.004 1:CAS:528:DC%2BD2sXhsFWrsw%3D%3D (Pubitemid 44960516)
-
(2007)
Journal of Biotechnology
, vol.128
, Issue.1
, pp. 93-111
-
-
Iwatani, S.1
Van Dien, S.2
Shimbo, K.3
Kubota, K.4
Kageyama, N.5
Iwahata, D.6
Miyano, H.7
Hirayama, K.8
Usuda, Y.9
Shimizu, K.10
Matsui, K.11
-
33
-
-
33751368850
-
Ion suppression: A major concern in mass spectrometry
-
LL Jessome DA Volmer 2006 Ion suppression: a major concern in mass spectrometry LCGC N Am 24 5 498 510 1:CAS:528:DC%2BD28XksFGqu7c%3D (Pubitemid 43886105)
-
(2006)
LC-GC North America
, vol.24
, Issue.5
, pp. 498-510
-
-
Jessome, L.L.1
Volmer, D.A.2
-
34
-
-
0030034873
-
Effect of channelling on the concentration of bulk-phase intermediates as cytosolic proteins become more concentrated
-
1:CAS:528:DyaK28XhtV2itbo%3D
-
BN Kholodenko HV Westerhoff M Cascante 1996 Effect of channelling on the concentration of bulk-phase intermediates as cytosolic proteins become more concentrated Biochem J 313 Pt 3 921 926 1:CAS:528:DyaK28XhtV2itbo%3D
-
(1996)
Biochem J
, vol.313
, Issue.PART 3
, pp. 921-926
-
-
Kholodenko, B.N.1
Westerhoff, H.V.2
Cascante, M.3
-
35
-
-
0033585824
-
Metabolite and isotopomer balancing in the analysis of metabolic cycles: I. Theory
-
DOI 10.1002/(SICI)1097-0290(19990220)62:4<375::AID-BIT1>3.0.CO;2-O
-
MI Klapa SM Park AJ Sinskey G Stephanopoulos 1999 Metabolite and isotopomer balancing in the analysis of metabolic cycles: I. Theory Biotechnol Bioeng 62 4 375 391 1:CAS:528:DyaK1MXns1Wmtg%3D%3D (Pubitemid 29052873)
-
(1999)
Biotechnology and Bioengineering
, vol.62
, Issue.4
, pp. 375-391
-
-
Klapa, M.I.1
Park, S.M.2
Sinskey, A.J.3
Stephanopoulos, G.4
-
37
-
-
33846995458
-
Metabolic flux analysis of a glycerol-overproducing Saccharomyces cerevisiae strain based on GC-MS, LC-MS and NMR-derived C-labelling data
-
10.1111/j.1567-1364.2006.00180.x 1:CAS:528:DC%2BD2sXjsVyqtrc%3D
-
RJ Kleijn JM Geertman BK Nfor C Ras D Schipper JT Pronk JJ Heijnen AJ van Maris WA van Winden 2007 Metabolic flux analysis of a glycerol-overproducing Saccharomyces cerevisiae strain based on GC-MS, LC-MS and NMR-derived C-labelling data FEMS Yeast Res 7 2 216 231 10.1111/j.1567-1364.2006.00180.x 1:CAS:528:DC%2BD2sXjsVyqtrc%3D
-
(2007)
FEMS Yeast Res
, vol.7
, Issue.2
, pp. 216-231
-
-
Kleijn, R.J.1
Geertman, J.M.2
Nfor, B.K.3
Ras, C.4
Schipper, D.5
Pronk, J.T.6
Heijnen, J.J.7
Van Maris, A.J.8
Van Winden, W.A.9
-
38
-
-
79551712199
-
Metabolomic approaches toward understanding nitrogen metabolism in plants
-
10.1093/jxb/erq417 1:CAS:528:DC%2BC3MXhs1Gjsbc%3D
-
M Kusano A Fukushima H Redestig K Saito 2011 Metabolomic approaches toward understanding nitrogen metabolism in plants J Exp Bot 62 4 1439 1453 10.1093/jxb/erq417 1:CAS:528:DC%2BC3MXhs1Gjsbc%3D
-
(2011)
J Exp Bot
, vol.62
, Issue.4
, pp. 1439-1453
-
-
Kusano, M.1
Fukushima, A.2
Redestig, H.3
Saito, K.4
-
39
-
-
0035813391
-
Statistical reconciliation of the elemental and molecular biomass composition of Saccharomyces cerevisiae
-
DOI 10.1002/bit.10054
-
HC Lange JJ Heijnen 2001 Statistical reconciliation of the elemental and molecular biomass composition of Saccharomyces cerevisiae Biotechnol Bioeng 75 3 334 344 10.1002/bit.10054 1:CAS:528:DC%2BD3MXnvFSisLk%3D (Pubitemid 33000727)
-
(2001)
Biotechnology and Bioengineering
, vol.75
, Issue.3
, pp. 334-344
-
-
Lange, H.C.1
Heijnen, J.J.2
-
40
-
-
0035923330
-
Improved rapid sampling for in vivo kinetics of intracellular metabolites in Saccharomyces cerevisiae
-
DOI 10.1002/bit.10048
-
HC Lange M Eman G van Zuijlen D Visser JC van Dam J Frank MJT de Mattos JJ Heijnen 2001 Improved rapid sampling for in vivo kinetics of intracellular metabolites in Saccharomyces cerevisiae Biotechnol Bioeng 75 4 406 415 1:CAS:528:DC%2BD3MXosVKisrw%3D (Pubitemid 33043008)
-
(2001)
Biotechnology and Bioengineering
, vol.75
, Issue.4
, pp. 406-415
-
-
Lange, H.C.1
Eman, M.2
Van Zuijlen, G.3
Visser, D.4
Van Dam, J.C.5
Frank, J.6
De Teixeira Mattos, M.J.7
Heijnen, J.J.8
-
41
-
-
77957332169
-
Tracer-based metabolomics: Concepts and practices
-
10.1016/j.clinbiochem.2010.07.027 1:CAS:528:DC%2BC3cXht1KrtbjM
-
WNP Lee PN Wahjudi J Xu VL Go 2010 Tracer-based metabolomics: concepts and practices Clin Biochem 43 16-17 1269 1277 10.1016/j.clinbiochem.2010.07.027 1:CAS:528:DC%2BC3cXht1KrtbjM
-
(2010)
Clin Biochem
, vol.43
, Issue.1617
, pp. 1269-1277
-
-
Lee, W.N.P.1
Wahjudi, P.N.2
Xu, J.3
Go, V.L.4
-
42
-
-
51649128997
-
Leakage of adenylates during cold methanol/glycerol quenching of Escherichia coli
-
10.1007/s11306-008-0114-6 1:CAS:528:DC%2BD1cXhtVyis7nF
-
H Link B Anselment D Weuster-Botz 2008 Leakage of adenylates during cold methanol/glycerol quenching of Escherichia coli Metabolomics 4 3 240 247 10.1007/s11306-008-0114-6 1:CAS:528:DC%2BD1cXhtVyis7nF
-
(2008)
Metabolomics
, vol.4
, Issue.3
, pp. 240-247
-
-
Link, H.1
Anselment, B.2
Weuster-Botz, D.3
-
43
-
-
33947503169
-
Simultaneous determination of multiple intracellular metabolites in glycolysis, pentose phosphate pathway and tricarboxylic acid cycle by liquid chromatography-mass spectrometry
-
DOI 10.1016/j.chroma.2007.02.034, PII S0021967307002907
-
B Luo K Grönke R Takors C Wandrey M Oldiges 2007 Simultaneous determination of multiple intracellular metabolites in glycolysis, pentose phosphate pathway and tricarboxylic acid cycle by liquid chromatography-mass spectrometry J Chromatogr A 1147 2 153 164 10.1016/j.chroma.2007.02.034 1:CAS:528:DC%2BD2sXjslGrt7o%3D (Pubitemid 46466829)
-
(2007)
Journal of Chromatography A
, vol.1147
, Issue.2
, pp. 153-164
-
-
Luo, B.1
Groenke, K.2
Takors, R.3
Wandrey, C.4
Oldiges, M.5
-
45
-
-
68049129530
-
13C-flux analysis
-
10.1016/j.ymben.2009.06.001 1:CAS:528:DC%2BD1MXps1ajsr8%3D
-
13C-flux analysis Metab Eng 11 4-5 292 309 10.1016/j.ymben.2009.06. 001 1:CAS:528:DC%2BD1MXps1ajsr8%3D
-
(2009)
Metab Eng
, vol.11
, Issue.45
, pp. 292-309
-
-
Maier, K.1
Hofmann, U.2
Bauer, A.3
Niebel, A.4
Vacun, G.5
Reuss, M.6
Mauch, K.7
-
46
-
-
75949123498
-
Subcellular flux analysis of central metabolism in a heterotrophic Arabidopsis cell suspension using steady-state stable isotope labeling
-
10.1104/pp.109.151316 1:CAS:528:DC%2BC3cXmsFegtr0%3D
-
SK Masakapalli P Le Lay JE Huddleston NL Pollock NJ Kruger RG Ratcliffe 2010 Subcellular flux analysis of central metabolism in a heterotrophic Arabidopsis cell suspension using steady-state stable isotope labeling Plant Physiol 152 2 602 619 10.1104/pp.109.151316 1:CAS:528:DC%2BC3cXmsFegtr0%3D
-
(2010)
Plant Physiol
, vol.152
, Issue.2
, pp. 602-619
-
-
Masakapalli, S.K.1
Le Lay, P.2
Huddleston, J.E.3
Pollock, N.L.4
Kruger, N.J.5
Ratcliffe, R.G.6
-
47
-
-
4243829380
-
Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments
-
DOI 10.1002/(SICI)1097-0290(1999)66:2<86::AID-BIT2>3.0.CO;2-A
-
M Möllney W Wiechert D Kownatzki AA de Graaf 1999 Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments Biotechnol Bioeng 66 2 86 103 (Pubitemid 32262269)
-
(1999)
Biotechnology and Bioengineering
, vol.66
, Issue.2
, pp. 86-103
-
-
Mollney, M.1
Wiechert, W.2
Kownatzki, D.3
De Graaf, A.A.4
-
48
-
-
53649110425
-
Systems-level metabolic flux profiling identifies fatty acid synthesis as a target for antiviral therapy
-
10.1038/Nbt.1500 1:CAS:528:DC%2BD1cXht1aisrrM
-
J Munger BD Bennett A Parikh XJ Feng J McArdle HA Rabitz T Shenk JD Rabinowitz 2008 Systems-level metabolic flux profiling identifies fatty acid synthesis as a target for antiviral therapy Nat Biotechnol 26 10 1179 1186 10.1038/Nbt.1500 1:CAS:528:DC%2BD1cXht1aisrrM
-
(2008)
Nat Biotechnol
, vol.26
, Issue.10
, pp. 1179-1186
-
-
Munger, J.1
Bennett, B.D.2
Parikh, A.3
Feng, X.J.4
McArdle, J.5
Rabitz, H.A.6
Shenk, T.7
Rabinowitz, J.D.8
-
50
-
-
33846849309
-
A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kinetics
-
DOI 10.1186/1471-2105-7-540
-
IE Nikerel WA van Winden WM van Gulik JJ Heijnen 2006 A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kinetics BMC Bioinforma 7 540 10.1186/1471-2105-7- 540 (Pubitemid 46210272)
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 540
-
-
Nikerel, I.E.1
Van Winden, W.A.2
Van Gulik, W.M.3
Heijnen, J.J.4
-
51
-
-
77950628238
-
Metabolic flux analysis in eukaryotes
-
10.1016/j.copbio.2010.01.011 1:CAS:528:DC%2BC3cXjslSjtbc%3D
-
J Niklas K Schneider E Heinzle 2010 Metabolic flux analysis in eukaryotes Curr Opin Biotechnol 21 1 63 69 10.1016/j.copbio.2010.01.011 1:CAS:528:DC%2BC3cXjslSjtbc%3D
-
(2010)
Curr Opin Biotechnol
, vol.21
, Issue.1
, pp. 63-69
-
-
Niklas, J.1
Schneider, K.2
Heinzle, E.3
-
52
-
-
0024962302
-
Analysis of a framework using material balances in metabolic pathways to elucidate cellular-metabolism
-
1:CAS:528:DyaL1MXltlamtrw%3D
-
SC Niranjan KY San 1989 Analysis of a framework using material balances in metabolic pathways to elucidate cellular-metabolism Biotechnol Bioeng 34 4 496 501 1:CAS:528:DyaL1MXltlamtrw%3D
-
(1989)
Biotechnol Bioeng
, vol.34
, Issue.4
, pp. 496-501
-
-
Niranjan, S.C.1
San, K.Y.2
-
53
-
-
79958703818
-
13C-MFA: A comparison using a consistent dataset
-
doi: 10.1016/j.jbiotec.2010.07.008
-
13C-MFA: a comparison using a consistent dataset. J Biotechnol. doi: 10.1016/j.jbiotec.2010.07.008
-
(2010)
J Biotechnol
-
-
Noack S, N.1
-
54
-
-
33744455445
-
13C labeling experiments
-
10.1002/bit.20803
-
13C labeling experiments Biotechnol Bioeng 94 2 234 251 10.1002/bit.20803
-
(2006)
Biotechnol Bioeng
, vol.94
, Issue.2
, pp. 234-251
-
-
Nöh, K.1
Wiechert, W.2
-
55
-
-
33749448867
-
13C labeling experiments under metabolic steady state conditions
-
DOI 10.1016/j.ymben.2006.05.006, PII S1096717606000449
-
13C labeling experiments under metabolic steady state conditions Metab Eng 8 6 554 577 10.1016/j.ymben.2006.05.006 (Pubitemid 44512159)
-
(2006)
Metabolic Engineering
, vol.8
, Issue.6
, pp. 554-577
-
-
Noh, K.1
Wahl, A.2
Wiechert, W.3
-
56
-
-
34047177923
-
13C labeling experiments
-
DOI 10.1016/j.jbiotec.2006.11.015, PII S0168165606009722
-
13C labeling experiments J Biotechnol 129 2 249 267 10.1016/j.jbiotec.2006.11.015 (Pubitemid 46529021)
-
(2007)
Journal of Biotechnology
, vol.129
, Issue.2
, pp. 249-267
-
-
Noh, K.1
Gronke, K.2
Luo, B.3
Takors, R.4
Oldiges, M.5
Wiechert, W.6
-
57
-
-
38349189124
-
Depiction of metabolome changes in histidine-starved Escherichia coli by CE-TOFMS
-
10.1039/b714176a 1:CAS:528:DC%2BD1cXovFKmsw%3D%3D
-
Y Ohashi A Hirayama T Ishikawa S Nakamura K Shimizu Y Ueno M Tomita T Soga 2008 Depiction of metabolome changes in histidine-starved Escherichia coli by CE-TOFMS Mol Biosyst 4 2 135 147 10.1039/b714176a 1:CAS:528: DC%2BD1cXovFKmsw%3D%3D
-
(2008)
Mol Biosyst
, vol.4
, Issue.2
, pp. 135-147
-
-
Ohashi, Y.1
Hirayama, A.2
Ishikawa, T.3
Nakamura, S.4
Shimizu, K.5
Ueno, Y.6
Tomita, M.7
Soga, T.8
-
58
-
-
17144388277
-
Applying metabolic profiling techniques for stimulus-response experiments: Chances and pitfalls
-
DOI 10.1007/b98913, Technology Transfer in Biotechnology: From lab to Industry to Production
-
M Oldiges R Takors 2005 Applying metabolic profiling techniques for stimulus-response experiments: chances and pitfalls Adv Biochem Eng Biotechnol 92 173 196 1:CAS:528:DC%2BD2MXktlertLw%3D (Pubitemid 44617158)
-
(2005)
Advances in Biochemical Engineering/Biotechnology
, vol.92
, pp. 173-196
-
-
Oldiges, M.1
Takors, R.2
-
60
-
-
0033991699
-
Macromolecular compartmentation and channeling
-
J Ovadi PA Srere 2000 Macromolecular compartmentation and channeling Int Rev Cytol 192 255 280 1:CAS:528:DC%2BD3cXlsVSqsg%3D%3D (Pubitemid 29501955)
-
(1999)
International Review of Cytology
, vol.192
, pp. 255-280
-
-
Ovadi, J.1
Srere, P.A.2
-
61
-
-
0033585823
-
Metabolite and isotopomer balancing in the analysis of metabolic cycles: II. Applications
-
DOI 10.1002/(SICI)1097-0290(19990220)62:4<392::AID-BIT2>3.0.CO;2-S
-
SM Park MI Klapa AJ Sinskey G Stephanopoulos 1999 Metabolite and isotopomer balancing in the analysis of metabolic cycles: II. Applications Biotechnol Bioeng 62 4 392 401 1:CAS:528:DyaK1MXns1aiuw%3D%3D (Pubitemid 29052874)
-
(1999)
Biotechnology and Bioengineering
, vol.62
, Issue.4
, pp. 392-401
-
-
Park, S.M.1
Klapa, M.I.2
Sinskey, A.J.3
Stephanopoulos, G.4
-
62
-
-
33947431021
-
Analysis of amino acid isotopomers using FT-ICR MS
-
DOI 10.1021/ac061906b
-
F Pingitore Y Tang GH Kruppa JD Keasling 2007 Analysis of amino acid isotopomers using FT-ICR MS Anal Chem 79 6 2483 2490 10.1021/ac061906b 1:CAS:528:DC%2BD2sXhslOrsrg%3D (Pubitemid 46449030)
-
(2007)
Analytical Chemistry
, vol.79
, Issue.6
, pp. 2483-2490
-
-
Pingitore, F.1
Tang, Y.2
Kruppa, G.H.3
Keasling, J.D.4
-
63
-
-
66749140138
-
ReMatch: A web-based tool to construct, store and share stoichiometric metabolic models with carbon maps for metabolic flux analysis
-
doi: 10.2390/biecoll-jib-2008-102
-
Pitkänen E, Akerlund A, Rantanen A, Jouhten P, Ukkonen E (2008) ReMatch: a web-based tool to construct, store and share stoichiometric metabolic models with carbon maps for metabolic flux analysis. J Integr Bioinform 5(2). doi: 10.2390/biecoll-jib-2008-102
-
(2008)
J Integr Bioinform
, vol.5
, Issue.2
-
-
Pitkänen E, A.1
-
64
-
-
0032552815
-
Effect of Escherichia coli biomass composition on central metabolic fluxes predicted by a stoichiometric model
-
DOI 10.1002/(SICI)1097-0290(19981020)60:2<230::AID-BIT10>3.0.CO;2-Q
-
J Pramanik JD Keasling 1998 Effect of Escherichia coli biomass composition on central metabolic fluxes predicted by a stoichiometric model Biotechnol Bioeng 60 2 230 238 1:CAS:528:DyaK1cXmt1Ggur4%3D (Pubitemid 28432366)
-
(1998)
Biotechnology and Bioengineering
, vol.60
, Issue.2
, pp. 230-238
-
-
Pramanik, J.1
Keasling, J.D.2
-
65
-
-
66949164842
-
OpenFLUX: Efficient modelling software for C-13-based metabolic flux analysis
-
10.1186/1475-2859-8-25
-
LE Quek C Wittmann LK Nielsen JO Kromer 2009 OpenFLUX: efficient modelling software for C-13-based metabolic flux analysis Microbial Cell Factories 8 25 10.1186/1475-2859-8-25
-
(2009)
Microbial Cell Factories
, vol.8
, pp. 25
-
-
Quek, L.E.1
Wittmann, C.2
Nielsen, L.K.3
Kromer, J.O.4
-
66
-
-
78650301750
-
CE-MS for metabolomics: Developments and applications in the period 2008-2010
-
10.1002/elps.201000378 1:CAS:528:DC%2BC3cXhsFyjtrvE
-
R Ramautar OA Mayboroda GW Somsen GJ de Jong 2011 CE-MS for metabolomics: developments and applications in the period 2008-2010 Electrophoresis 32 1 52 65 10.1002/elps.201000378 1:CAS:528:DC%2BC3cXhsFyjtrvE
-
(2011)
Electrophoresis
, vol.32
, Issue.1
, pp. 52-65
-
-
Ramautar, R.1
Mayboroda, O.A.2
Somsen, G.W.3
De Jong, G.J.4
-
68
-
-
79954459893
-
Construction of an E. coli genome-scale atom mapping model for MFA calculations
-
doi: 10.1002/bit.23070
-
Ravikirthi P, Suthers PF, Maranas CD (2011) Construction of an E. coli genome-scale atom mapping model for MFA calculations. Biotechnol Bioeng. doi: 10.1002/bit.23070
-
(2011)
Biotechnol Bioeng
-
-
Ravikirthi, P.1
Suthers, P.F.2
Maranas, C.D.3
-
69
-
-
33846061120
-
13C-based flux analysis
-
DOI 10.1038/msb4100109, PII MSB4100109
-
Sauer U (2006) Metabolic networks in motion: C-13-based flux analysis. Mol Syst Biol. doi: 10.1038/Msb4100109 (Pubitemid 46061084)
-
(2006)
Molecular Systems Biology
, vol.2
, pp. 62
-
-
Sauer, U.1
-
70
-
-
53649107567
-
From biomarkers to integrated network responses
-
10.1038/nbt1008-1090 1:CAS:528:DC%2BD1cXht1aisr%2FL
-
U Sauer N Zamboni 2008 From biomarkers to integrated network responses Nat Biotechnol 26 10 1090 1092 10.1038/nbt1008-1090 1:CAS:528: DC%2BD1cXht1aisr%2FL
-
(2008)
Nat Biotechnol
, vol.26
, Issue.10
, pp. 1090-1092
-
-
Sauer, U.1
Zamboni, N.2
-
71
-
-
67349204820
-
Rapid sampling devices for metabolic engineering applications
-
10.1007/s00253-009-1976-x
-
F Schädel E Franco-Lara 2009 Rapid sampling devices for metabolic engineering applications Appl Microbiol Biotechnol 83 2 199 208 10.1007/s00253-009-1976-x
-
(2009)
Appl Microbiol Biotechnol
, vol.83
, Issue.2
, pp. 199-208
-
-
Schädel, F.1
Franco-Lara, E.2
-
72
-
-
0033562562
-
Automated sampling device for monitoring intracellular metabolite dynamics
-
DOI 10.1006/abio.1999.4048
-
U Schaefer W Boos R Takors D Weuster-Botz 1999 Automated sampling device for monitoring intracellular metabolite dynamics Anal Biochem 270 1 88 96 1:CAS:528:DyaK1MXjtVekur4%3D (Pubitemid 29230724)
-
(1999)
Analytical Biochemistry
, vol.270
, Issue.1
, pp. 88-96
-
-
Schaefer, U.1
Boos, W.2
Takors, R.3
Weuster-Botz, D.4
-
74
-
-
0343471424
-
Modeling isotopomer distributions in biochemical networks using isotopomer mapping matrices
-
DOI 10.1002/(SICI)1097-0290(19970920)55:6<831::AID-BIT2>3.0.CO;2-H
-
K Schmidt M Carlsen J Nielsen J Villadsen 1997 Modeling isotopomer distributions in biochemical networks using isotopomer mapping matrices Biotechnol Bioeng 55 6 831 840 1:CAS:528:DyaK2sXlslaqsr8%3D (Pubitemid 27360504)
-
(1997)
Biotechnology and Bioengineering
, vol.55
, Issue.6
, pp. 831-840
-
-
Schmidt, K.1
Carlsen, M.2
Nielsen, J.3
Villadsen, J.4
-
75
-
-
42249096434
-
Metabolic flux analysis as a tool in metabolic engineering of plants
-
10.1016/j.copbio.2008.02.006 1:CAS:528:DC%2BD1cXlslKis7k%3D
-
J Schwender 2008 Metabolic flux analysis as a tool in metabolic engineering of plants Curr Opin Biotech 19 2 131 137 10.1016/j.copbio.2008.02. 006 1:CAS:528:DC%2BD1cXlslKis7k%3D
-
(2008)
Curr Opin Biotech
, vol.19
, Issue.2
, pp. 131-137
-
-
Schwender, J.1
-
76
-
-
34547657059
-
13C metabolic flux analysis of photoautotrophic microorganisms
-
DOI 10.1016/j.phytochem.2007.03.042, PII S0031942207002166
-
13C metabolic flux analysis of photoautotrophic microorganisms Phytochemistry 68 16-18 2302 2312 10.1016/j.phytochem.2007.03.042 1:CAS:528:DC%2BD2sXovFynsr0%3D (Pubitemid 47211185)
-
(2007)
Phytochemistry
, vol.68
, Issue.16-18
, pp. 2302-2312
-
-
Shastri, A.A.1
Morgan, J.A.2
-
77
-
-
22144471210
-
2 in intact Escherichia coli
-
DOI 10.1111/j.1742-4658.2005.04712.x
-
2 in intact Escherichia coli FEBS J 272 13 3260 3269 10.1111/j.1742-4658.2005.04712.x 1:CAS:528:DC%2BD2MXmtFKrtb8%3D (Pubitemid 40979299)
-
(2005)
FEBS Journal
, vol.272
, Issue.13
, pp. 3260-3269
-
-
Shearer, G.1
Lee, J.C.2
Koo, J.-A.3
Kohl, D.H.4
-
79
-
-
35548947590
-
13C labeled isotopes
-
DOI 10.1016/j.ymben.2007.05.005, PII S1096717607000316
-
13C labeled isotopes Metab Eng 9 5-6 387 405 10.1016/j.ymben.2007.05. 005 1:CAS:528:DC%2BD2sXht1Gqu7jJ (Pubitemid 350016968)
-
(2007)
Metabolic Engineering
, vol.9
, Issue.5-6
, pp. 387-405
-
-
Suthers, P.F.1
Burgard, A.P.2
Dasika, M.S.3
Nowroozi, F.4
Van Dien, S.5
Keasling, J.D.6
Maranas, C.D.7
-
80
-
-
76749140314
-
Improved computational performance of MFA using elementary metabolite units and flux coupling
-
10.1016/j.ymben.2009.10.002 1:CAS:528:DC%2BC3cXit1Omuro%3D
-
PF Suthers YJ Chang CD Maranas 2010 Improved computational performance of MFA using elementary metabolite units and flux coupling Metab Eng 12 2 123 128 10.1016/j.ymben.2009.10.002 1:CAS:528:DC%2BC3cXit1Omuro%3D
-
(2010)
Metab Eng
, vol.12
, Issue.2
, pp. 123-128
-
-
Suthers, P.F.1
Chang, Y.J.2
Maranas, C.D.3
-
81
-
-
0029146299
-
13C-labeling of proteinogenic amino acids. An efficient analytical tool to investigate intermediary metabolism
-
1:CAS:528:DyaK2MXotlGis74%3D
-
13C-labeling of proteinogenic amino acids. An efficient analytical tool to investigate intermediary metabolism Eur J Biochem 232 2 433 448 1:CAS:528:DyaK2MXotlGis74%3D
-
(1995)
Eur J Biochem
, vol.232
, Issue.2
, pp. 433-448
-
-
Szyperski, T.1
-
82
-
-
58349085312
-
Development and application of a differential method for reliable metabolome analysis in Escherichia coli
-
10.1016/j.ab.2008.11.018 1:CAS:528:DC%2BD1MXhtFenur8%3D
-
H Taymaz-Nikerel M de Mey C Ras A ten Pierick RM Seifar JC van Dam JJ Heijnen WM van Gulik 2009 Development and application of a differential method for reliable metabolome analysis in Escherichia coli Anal Biochem 386 1 9 19 10.1016/j.ab.2008.11.018 1:CAS:528:DC%2BD1MXhtFenur8%3D
-
(2009)
Anal Biochem
, vol.386
, Issue.1
, pp. 9-19
-
-
Taymaz-Nikerel, H.1
De Mey, M.2
Ras, C.3
Ten Pierick, A.4
Seifar, R.M.5
Van Dam, J.C.6
Heijnen, J.J.7
Van Gulik, W.M.8
-
83
-
-
0027380246
-
In vivo analysis of glucose-induced fast changes in yeast adenine nucleotide pool applying a rapid sampling technique
-
DOI 10.1006/abio.1993.1452
-
U Theobald W Mailinger M Reuss M Rizzi 1993 In-vivo analysis of glucose-induced fast changes in yeast adenine-nucleotide pool applying a rapid sampling technique Anal Biochem 214 1 31 37 1:CAS:528:DyaK3sXms1Gltb4%3D (Pubitemid 23300349)
-
(1993)
Analytical Biochemistry
, vol.214
, Issue.1
, pp. 31-37
-
-
Theobald, U.1
Mailinger, W.2
Reuss, M.3
Rizzi, M.4
-
84
-
-
0343471961
-
In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae: I. Experimental observations
-
DOI 10.1002/(SICI)1097-0290(19970720)55:2<305::AID-BIT8>3.0.CO;2-M
-
U Theobald W Mailinger M Baltes M Rizzi M Reuss 1997 In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae: I. Experimental observations Biotechnol Bioeng 55 2 305 316 1:CAS:528:DyaK2sXksFCrurw%3D (Pubitemid 27291199)
-
(1997)
Biotechnology and Bioengineering
, vol.55
, Issue.2
, pp. 305-316
-
-
Theobald, U.1
Mailinger, W.2
Baltes, M.3
Rizzi, M.4
Reuss, M.5
-
85
-
-
34447276204
-
Direct measurement of isotopomer of intracellular metabolites using capillary electrophoresis time-of-flight mass spectrometry for efficient metabolic flux analysis
-
DOI 10.1016/j.chroma.2007.04.011, PII S0021967307006760
-
Y Toya N Ishii T Hirasawa M Naba K Hirai K Sugawara S Igarashi K Shimizu M Tomita T Soga 2007 Direct measurement of isotopomer of intracellular metabolites using capillary electrophoresis time-of-flight mass spectrometry for efficient metabolic flux analysis J Chromatogr A 1159 1-2 134 141 10.1016/j.chroma.2007.04.011 1:CAS:528:DC%2BD2sXnslGgt7k%3D (Pubitemid 47048250)
-
(2007)
Journal of Chromatography A
, vol.1159
, Issue.1-2
, pp. 134-141
-
-
Toya, Y.1
Ishii, N.2
Hirasawa, T.3
Naba, M.4
Hirai, K.5
Sugawara, K.6
Igarashi, S.7
Shimizu, K.8
Tomita, M.9
Soga, T.10
-
86
-
-
34547786580
-
13C NMR determines metabolic fluxes and steady state in linseed embryos
-
DOI 10.1016/j.phytochem.2007.04.018, PII S0031942207002774
-
S Troufflard A Roscher B Thomasset JN Barbotin S Rawsthorne JC Portais 2007 In vivo C-13 NMR determines metabolic fluxes and steady state in, linseed embryos Phytochemistry 68 16-18 2341 2350 10.1016/j.phytochem.2007.04.018 1:CAS:528:DC%2BD2sXovFynsrk%3D (Pubitemid 47224959)
-
(2007)
Phytochemistry
, vol.68
, Issue.16-18
, pp. 2341-2350
-
-
Troufflard, S.1
Roscher, A.2
Thomasset, B.3
Barbotin, J.-N.4
Rawsthorne, S.5
Portais, J.-C.6
-
87
-
-
0027572102
-
Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction
-
JJ Vallino G Stephanopoulos 1993 Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction Biotechnol Bioeng 41 6 633 646 10.1002/bit.260410606 1:CAS:528:DyaK3sXhs1Omsr0%3D (Pubitemid 23067907)
-
(1993)
Biotechnology and Bioengineering
, vol.41
, Issue.6
, pp. 633-646
-
-
Vallino, J.J.1
Stephanopoulos, G.2
-
88
-
-
34548605361
-
Microbial metabolomics: Toward a platform with full metabolome coverage
-
DOI 10.1016/j.ab.2007.07.022, PII S0003269707004782
-
MJ van der Werf KM Overkamp B Muilwijk L Coulier T Hankemeier 2007 Microbial metabolomics: toward a platform with full metabolome coverage Anal Biochem 370 1 17 25 10.1016/j.ab.2007.07.022 (Pubitemid 47404495)
-
(2007)
Analytical Biochemistry
, vol.370
, Issue.1
, pp. 17-25
-
-
Werf, M.J.V.D.1
Overkamp, K.M.2
Muilwijk, B.3
Coulier, L.4
Hankemeier, T.5
-
89
-
-
77950629593
-
Fast sampling for quantitative microbial metabolomics
-
10.1016/j.copbio.2010.01.008
-
WM van Gulik 2010 Fast sampling for quantitative microbial metabolomics Curr Opin Biotechnol 21 1 27 34 10.1016/j.copbio.2010.01.008
-
(2010)
Curr Opin Biotechnol
, vol.21
, Issue.1
, pp. 27-34
-
-
Van Gulik, W.M.1
-
91
-
-
15044347498
-
13C-labeled primary metabolites
-
DOI 10.1016/j.femsyr.2004.10.007, Fungal Physiology, Moving Towards Fungal Physionomics
-
13C-labeled primary metabolites FEMS Yeast Res 5 6-7 559 568 10.1016/j.femsyr.2004.10.007 (Pubitemid 40380696)
-
(2005)
FEMS Yeast Research
, vol.5
, Issue.6-7
, pp. 559-568
-
-
Van Winden, W.A.1
Van Dam, J.C.2
Ras, C.3
Kleijn, R.J.4
Vinke, J.L.5
Van Gulik, W.M.6
Heijnen, J.J.7
-
92
-
-
0028108519
-
Metabolic flux balancing-basic concepts, scientific and practical use
-
1:CAS:528:DyaK2MXhtFansL0%3D
-
A Varma BO Palsson 1994 Metabolic flux balancing-basic concepts, scientific and practical use Bio-Technol 12 10 994 998 1:CAS:528: DyaK2MXhtFansL0%3D
-
(1994)
Bio-Technol
, vol.12
, Issue.10
, pp. 994-998
-
-
Varma, A.1
Palsson, B.O.2
-
93
-
-
34548644070
-
Cold glycerol-saline: The promising quenching solution for accurate intracellular metabolite analysis of microbial cells
-
DOI 10.1016/j.ab.2007.06.028, PII S0003269707004022
-
SG Villas-Boas P Bruheim 2007 Cold glycerol-saline: the promising quenching solution for accurate intracellular metabolite analysis of microbial cells Anal Biochem 370 1 87 97 10.1016/j.ab.2007.06.028 1:CAS:528: DC%2BD2sXhtVOmur3I (Pubitemid 47404490)
-
(2007)
Analytical Biochemistry
, vol.370
, Issue.1
, pp. 87-97
-
-
Villas-Boas, S.G.1
Bruheim, P.2
-
94
-
-
0037144089
-
Rapid sampling for analysis of in vivo kinetics using the BioScope: A system for continuous-pulse experiments
-
DOI 10.1002/bit.10328
-
D Visser GA van Zuylen JC van Dam A Oudshoorn MR Eman C Ras WM van Gulik J Frank GW van Dedem JJ Heijnen 2002 Rapid sampling for analysis of in vivo kinetics using the BioScope: a system for continuous-pulse experiments Biotechnol Bioeng 79 6 674 681 10.1002/bit.10328 1:CAS:528:DC%2BD38XmslSktL4%3D (Pubitemid 34966466)
-
(2002)
Biotechnology and Bioengineering
, vol.79
, Issue.6
, pp. 674-681
-
-
Visser, D.1
Van Zuylen, G.A.2
Van Dam, J.C.3
Oudshoorn, A.4
Eman, M.R.5
Ras, C.6
Van Gulik, W.M.7
Frank, J.8
Van Dedem, G.W.K.9
Heijnen, J.J.10
-
96
-
-
33746623003
-
Unravelling the regulatory structure of biochemical networks using stimulus response experiments and large-scale model selection
-
DOI 10.1049/ip-syb:20050089
-
SA Wahl MD Haunschild M Oldiges W Wiechert 2006 Unravelling the regulatory structure of biochemical networks using stimulus response experiments and large-scale model selection IEE Proc Syst Biol 153 4 275 285 10.1049/ip-syb:20050089 1:STN:280:DC%2BD28rmtFWqtw%3D%3D (Pubitemid 44151487)
-
(2006)
IEE Proceedings: Systems Biology
, vol.153
, Issue.4
, pp. 275-285
-
-
Wahl, S.A.1
Haunschild, M.D.2
Oldiges, M.3
Wiechert, W.4
-
97
-
-
43149099413
-
13C labeling experiments at metabolic nonstationary conditions: An exploratory study
-
DOI 10.1186/1471-2105-9-152
-
13C labeling experiments at metabolic nonstationary conditions: an exploratory study BMC Bioinforma 9 152 10.1186/1471-2105-9-152 (Pubitemid 351639555)
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 152
-
-
Wahl, S.A.1
Noh, K.2
Wiechert, W.3
-
98
-
-
41049107411
-
The topology of metabolic isotope labeling networks
-
DOI 10.1186/1471-2105-8-315
-
M Weitzel W Wiechert K Nöh 2007 The topology of metabolic isotope labeling networks BMC Bioinforma 8 315 10.1186/1471-2105-8-315 (Pubitemid 351659007)
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 315
-
-
Weitzel, M.1
Wiechert, W.2
Noh, K.3
-
99
-
-
0028304634
-
Metabolic channeling versus free diffusion: Transition-time analysis
-
DOI 10.1016/0968-0004(94)90019-1
-
GR Welch JS Easterby 1994 Metabolic channeling versus free diffusion: transition-time analysis Trends Biochem Sci 19 5 193 197 1:CAS:528: DyaK2MXhsVejsg%3D%3D (Pubitemid 24187239)
-
(1994)
Trends in Biochemical Sciences
, vol.19
, Issue.5
, pp. 193-197
-
-
Welch, G.R.1
Easterby, J.S.2
-
100
-
-
0034741983
-
13C metabolic flux analysis
-
DOI 10.1006/mben.2001.0187
-
13C metabolic flux analysis Metab Eng 3 3 195 206 10.1006/mben.2001.0187 1:CAS:528:DC%2BD3MXlt1Cls78%3D (Pubitemid 32748163)
-
(2001)
Metabolic Engineering
, vol.3
, Issue.3
, pp. 195-206
-
-
Wiechert, W.1
-
101
-
-
0036371291
-
13C metabolic flux analysis
-
1:CAS:528:DC%2BD3sXit1Ortbg%3D
-
13C metabolic flux analysis Genet Eng (N Y) 24 215 238 1:CAS:528:DC%2BD3sXit1Ortbg%3D
-
(2002)
Genet Eng (N Y)
, vol.24
, pp. 215-238
-
-
Wiechert, W.1
-
102
-
-
34548811453
-
The thermodynamic meaning of metabolic exchange fluxes
-
DOI 10.1529/biophysj.106.099895
-
W Wiechert 2007 The thermodynamic meaning of metabolic exchange fluxes Biophys J 93 6 2255 2264 10.1529/biophysj.106.099895 1:CAS:528: DC%2BD2sXhtVSqur3O (Pubitemid 47437608)
-
(2007)
Biophysical Journal
, vol.93
, Issue.6
, pp. 2255-2264
-
-
Wiechert, W.1
-
104
-
-
17144387903
-
From stationary to instationary metabolic flux analysis
-
Technology Transfer in Biotechnology: From lab to Industry to Production
-
W Wiechert K Nöh 2005 From stationary to instationary metabolic flux analysis Adv Biochem Eng Biotechnol 92 145 172 1:CAS:528:DC%2BD2MXktlertL8%3D (Pubitemid 44617157)
-
(2005)
Advances in Biochemical Engineering/Biotechnology
, vol.92
, pp. 145-172
-
-
Wiechert, W.1
Noh, K.2
-
105
-
-
0035101471
-
Metabolic isotopomer labeling systems part I: Global dynamic behavior
-
DOI 10.1016/S0025-5564(00)00059-6, PII S0025556400000596
-
W Wiechert M Wurzel 2001 Metabolic isotopomer labeling systems. Part I: global dynamic behavior Math Biosci 169 2 173 205 1:CAS:528: DC%2BD3MXpsFSjsg%3D%3D (Pubitemid 32164715)
-
(2001)
Mathematical Biosciences
, vol.169
, Issue.2
, pp. 173-205
-
-
Wiechert, W.1
Wurzel, M.2
-
106
-
-
0343267841
-
Bidirectional reaction steps in metabolic networks: III. Explicit solution and analysis of isotopomer labeling systems
-
DOI 10.1002/(SICI)1097-0290(1999)66:2<69::AID-BIT1>3.0.CO;2-6
-
W Wiechert M Möllney N Isermann M Wurzel AA de Graaf 1999 Bidirectional reaction steps in metabolic networks: III. Explicit solution and analysis of isotopomer labeling systems Biotechnol Bioeng 66 2 69 85 1:CAS:528:DyaK1MXnvFyltrk%3D (Pubitemid 32262268)
-
(1999)
Biotechnology and Bioengineering
, vol.66
, Issue.2
, pp. 69-85
-
-
Wiechert, W.1
Mollney, M.2
Isermann, N.3
Wurzel, M.4
De Graaf, A.A.5
-
108
-
-
0037102384
-
In vivo analysis of intracellular amino acid labelings by GC/MS
-
DOI 10.1016/S0003-2697(02)00030-1, PII S0003269702000301
-
C Wittmann M Hans E Heinzle 2002 In vivo analysis of intracellular amino acid labelings by GC/MS Anal Biochem 307 2 379 382 1:CAS:528: DC%2BD38XmsV2rsL4%3D (Pubitemid 35026214)
-
(2002)
Analytical Biochemistry
, vol.307
, Issue.2
, pp. 379-382
-
-
Wittmann, C.1
Hans, M.2
Heinzle, E.3
-
109
-
-
1642374638
-
Impact of the cold shock phenomenon on quantification of intracellular metabolites in bacteria
-
DOI 10.1016/j.ab.2004.01.002, PII S0003269704000740
-
C Wittmann JO Krömer P Kiefer T Binz E Heinzle 2004 Impact of the cold shock phenomenon on quantification of intracellular metabolites in bacteria Anal Biochem 327 1 135 139 10.1016/J.Ab.2004.01.002 1:CAS:528: DC%2BD2cXitFKht7g%3D (Pubitemid 38367993)
-
(2004)
Analytical Biochemistry
, vol.327
, Issue.1
, pp. 135-139
-
-
Wittmann, C.1
Kromer, J.O.2
Kiefer, P.3
Binz, T.4
Heinzle, E.5
-
110
-
-
42649132891
-
13C metabolic flux analysis using systems parametrized by compactification
-
DOI 10.1186/1752-0509-2-29
-
13C metabolic flux analysis using systems parametrized by compactification BMC Syst Biol 2 29 10.1186/1752-0509-2-29 (Pubitemid 351597467)
-
(2008)
BMC Systems Biology
, vol.2
, pp. 29
-
-
Yang, T.H.1
Frick, O.2
Heinzle, E.3
-
111
-
-
38449111120
-
An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis
-
DOI 10.1002/bit.21632
-
JD Young JL Walther MR Antoniewicz H Yoo G Stephanopoulos 2008 An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis Biotechnol Bioeng 99 3 686 699 10.1002/bit.21632 1:CAS:528: DC%2BD1cXns1Wisg%3D%3D (Pubitemid 351158266)
-
(2008)
Biotechnology and Bioengineering
, vol.99
, Issue.3
, pp. 686-699
-
-
Young, J.D.1
Walther, J.L.2
Antoniewicz, M.R.3
Yoo, H.4
Stephanopoulos, G.5
-
112
-
-
50349092706
-
Kinetic flux profiling for quantitation of cellular metabolic fluxes
-
10.1038/nprot.2008.131 1:CAS:528:DC%2BD1cXhtVSisLnO
-
J Yuan BD Bennett JD Rabinowitz 2008 Kinetic flux profiling for quantitation of cellular metabolic fluxes Nat Protoc 3 8 1328 1340 10.1038/nprot.2008.131 1:CAS:528:DC%2BD1cXhtVSisLnO
-
(2008)
Nat Protoc
, vol.3
, Issue.8
, pp. 1328-1340
-
-
Yuan, J.1
Bennett, B.D.2
Rabinowitz, J.D.3
-
113
-
-
77953023574
-
13C metabolic flux analysis for larger scale cultivation using gas chromatography-combustion-isotope ratio mass spectrometry
-
10.1016/j.ymben.2010.02.001 1:CAS:528:DC%2BC3cXntVegtrg%3D
-
13C metabolic flux analysis for larger scale cultivation using gas chromatography-combustion-isotope ratio mass spectrometry Metab Eng 12 4 392 400 10.1016/j.ymben.2010.02.001 1:CAS:528:DC%2BC3cXntVegtrg%3D
-
(2010)
Metab Eng
, vol.12
, Issue.4
, pp. 392-400
-
-
Yuan, Y.1
Yang, T.H.2
Heinzle, E.3
-
114
-
-
79551508527
-
13C metabolic flux analysis in complex systems
-
10.1016/j.copbio.2010.08.009 1:CAS:528:DC%2BC3MXhs1egsbo%3D
-
13C metabolic flux analysis in complex systems Curr Opin Biotechnol 22 1 103 108 10.1016/j.copbio.2010.08.009 1:CAS:528:DC%2BC3MXhs1egsbo%3D
-
(2011)
Curr Opin Biotechnol
, vol.22
, Issue.1
, pp. 103-108
-
-
Zamboni, N.1
-
116
-
-
66749182798
-
13C-based metabolic flux analysis
-
10.1038/nprot.2009.58 1:CAS:528:DC%2BD1MXmsVyqtLw%3D
-
13C-based metabolic flux analysis Nat Protoc 4 6 878 892 10.1038/nprot.2009.58 1:CAS:528:DC%2BD1MXmsVyqtLw%3D
-
(2009)
Nat Protoc
, vol.4
, Issue.6
, pp. 878-892
-
-
Zamboni, N.1
Fendt, S.M.2
Rühl, M.3
Sauer, U.4
-
117
-
-
44849135488
-
13C gluconate tracer method for accurate determination of the pentose phosphate pathway split-ratio in Penicillium chrysogenum
-
DOI 10.1016/j.ymben.2008.04.003, PII S1096717608000177
-
13C gluconate tracer method for accurate determination of the pentose phosphate pathway split-ratio in Penicillium chrysogenum Metab Eng 10 3-4 178 186 10.1016/j.ymben.2008.04.003 1:CAS:528:DC%2BD1cXnt1ektbk%3D (Pubitemid 351794567)
-
(2008)
Metabolic Engineering
, vol.10
, Issue.3-4
, pp. 178-186
-
-
Zhao, Z.1
Kuijvenhoven, K.2
Ras, C.3
Van Gulik, W.M.4
Heijnen, J.J.5
Verheijen, P.J.T.6
Van Winden, W.A.7
|