메뉴 건너뛰기




Volumn 23, Issue 1, 2011, Pages 94-106

Nuclear architecture in developmental biology and cell specialisation

Author keywords

3D electron microscopy; chromosome territory; in vitro fertilisation; nuclear organisation; preimplantation embryos; spatially assigned localisation microscopy; structured illumination microscopy

Indexed keywords

CELL DIFFERENTIATION; CELL SPECIFICITY; CELL TRANSFER; CONFERENCE PAPER; COW; CYTOARCHITECTURE; DEVELOPMENTAL BIOLOGY; ELECTRON MICROSCOPY; EMBRYO DEVELOPMENT; FERTILIZATION IN VITRO; FLUORESCENCE MICROSCOPY; HUMAN; NONHUMAN; PHENOTYPE; PREIMPLANTATION EMBRYO; RABBIT; TOPOGRAPHY; ZYGOTE;

EID: 78650113662     PISSN: 10313613     EISSN: None     Source Type: Journal    
DOI: 10.1071/RD10249     Document Type: Conference Paper
Times cited : (16)

References (107)
  • 1
    • 77956272401 scopus 로고    scopus 로고
    • Global chromatin architecture reflects pluripotency and lineage commitment in the early mouse embryo
    • doi:10.1371/JOURNAL.PONE.0010531
    • Ahmed, K., Dehghani, H., Rugg-Gunn, P., Fussner, E., Rossant, J., and Bazett-Jones, D. P. (2010). Global chromatin architecture reflects pluripotency and lineage commitment in the early mouse embryo. PLoS ONE 5(5), e10531. doi:10.1371/JOURNAL.PONE.0010531
    • (2010) PLoS ONE , vol.5 , Issue.5
    • Ahmed, K.1    Dehghani, H.2    Rugg-Gunn, P.3    Fussner, E.4    Rossant, J.5    Bazett-Jones, D.P.6
  • 3
    • 0042349278 scopus 로고    scopus 로고
    • Response to X-ray-and cis Pt-induced DNA damage in Stylo-nychia lemnae (Ciliata, Protozoa)
    • doi:10.1078/0932-4739-00911
    • Ammermann, D., Hellmer, K. H., Zassoukhina, I., and Skovorodkin, I. (2003). Response to X-ray-and cis Pt-induced DNA damage in Stylo-nychia lemnae (Ciliata, Protozoa). Eur. J. Protistol. 39, 223-230. doi:10.1078/0932-4739-00911
    • (2003) Eur. J. Protistol. , vol.39 , pp. 223-230
    • Ammermann, D.1    Hellmer, K.H.2    Zassoukhina, I.3    Skovorodkin, I.4
  • 4
    • 36849038994 scopus 로고    scopus 로고
    • Sensing X chromosome pairs before X inactivation via a novel X-pairing region of the Xic
    • doi:10.1126/SCIENCE.1149420
    • Augui, S., Filion, G. J., Huart, S., Nora, E., Guggiari, M., Maresca, M., Stewart, A. F., and Heard, E. (2007). Sensing X chromosome pairs before X inactivation via a novel X-pairing region of the Xic. Science 318(5856), 1632-1636. doi:10.1126/SCIENCE.1149420
    • (2007) Science , vol.318 , Issue.5856 , pp. 1632-1636
    • Augui, S.1    Filion, G.J.2    Huart, S.3    Nora, E.4    Guggiari, M.5    Maresca, M.6    Stewart, A.F.7    Heard, E.8
  • 5
    • 47249136130 scopus 로고    scopus 로고
    • Histone modifications and nuclear architecture: A review
    • doi:10.1369/JHC.2008.951251
    • Bártová, E., Krejc?́?, J., Harnic?arová,A., Galiova, G., and Kozubek,S.(2008). Histone modifications and nuclear architecture: a review. J. Histochem. Cytochem. 56(8), 711-721. doi:10.1369/JHC.2008.951251
    • (2008) J. Histochem. Cytochem. , vol.56 , Issue.8 , pp. 711-721
    • Bártová, E.1    Krejć, J.2    Harnicarová, A.3    Galiova, G.4    Kozubek, S.5
  • 6
    • 34249299791 scopus 로고    scopus 로고
    • The complex language of chromatin regulation during transcription
    • doi:10.1038/NATURE05915
    • Berger, S. L. (2007). The complex language of chromatin regulation during transcription.Nature447(7143), 407-412. doi:10.1038/NATURE05915
    • (2007) Nature , vol.447 , Issue.7143 , pp. 407-412
    • Berger, S.L.1
  • 8
    • 33646729244 scopus 로고    scopus 로고
    • Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations
    • doi:10.1371/JOURNAL.PBIO.0040138
    • Branco, M. R., and Pombo, A. (2006). Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations. PLoS Biol. 4(5), e138. doi:10.1371/JOURNAL.PBIO.0040138
    • (2006) PLoS Biol. , vol.4 , Issue.5
    • Branco, M.R.1    Pombo, A.2
  • 9
    • 38049100990 scopus 로고    scopus 로고
    • Chromosome neighbourhood composition determines trans-location outcomes after exposure to high-dose radiation in primary cells
    • doi:10.1007/S10577-007-1181-7
    • Brianna Caddle, L., Grant, J. L., Szatkiewicz, J., van Hase, J., Shirley, B. J., Bewersdorf, J., Cremer, C., Arneodo, A., Khalil, A., and Mills, K. D. (2007). Chromosome neighbourhood composition determines trans-location outcomes after exposure to high-dose radiation in primary cells. Chromosome Res. 15(8), 1061-1073. doi:10.1007/S10577-007-1181-7
    • (2007) Chromosome Res. , vol.15 , Issue.8 , pp. 1061-1073
    • Brianna Caddle, L.1    Grant, J.L.2    Szatkiewicz, J.3    Van Hase, J.4    Shirley, B.J.5    Bewersdorf, J.6    Cremer, C.7    Arneodo, A.8    Khalil, A.9    Mills, K.D.10
  • 10
    • 2442695407 scopus 로고    scopus 로고
    • Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription
    • doi:10.1101/GAD. 292104
    • Chambeyron, S., and Bickmore, W. A. (2004). Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription. Genes Dev. 18(10), 1119-1130. doi:10.1101/GAD. 292104
    • (2004) Genes Dev. , vol.18 , Issue.10 , pp. 1119-1130
    • Chambeyron, S.1    Bickmore, W.A.2
  • 11
    • 19744379789 scopus 로고    scopus 로고
    • Nuclear re-organisation of the Hoxb complex during mouse embryonic development
    • doi:10.1242/DEV.01813
    • Chambeyron, S., Da Silva, N. R., Lawson, K. A., and Bickmore, W. A. (2005). Nuclear re-organisation of the Hoxb complex during mouse embryonic development. Development 132(9), 2215-2223. doi:10.1242/DEV.01813
    • (2005) Development , vol.132 , Issue.9 , pp. 2215-2223
    • Chambeyron, S.1    Da Silva, N.R.2    Lawson, K.A.3    Bickmore, W.A.4
  • 12
    • 35648941611 scopus 로고    scopus 로고
    • Moving chromatin within the interphase nucleus-controlled transitions?Semin
    • doi:10.1016/J.SEMCDB.2007.08.012
    • Chuang, C. H., and Belmont, A. S. (2007). Moving chromatin within the interphase nucleus-controlled transitions?Semin. Cell Dev. Biol.18(5), 698-706. doi:10.1016/J.SEMCDB.2007.08.012
    • (2007) Cell Dev. Biol. , vol.18 , Issue.5 , pp. 698-706
    • Chuang, C.H.1    Belmont, A.S.2
  • 13
    • 33646021963 scopus 로고    scopus 로고
    • Long-range directional movement of an interphase chromosome site
    • doi:10.1016/J.CUB.2006.03.059
    • Chuang, C. H., Carpenter, A. E., Fuchsova, B., Johnson, T., de Lanerolle, P., and Belmont, A. S. (2006). Long-range directional movement of an interphase chromosome site. Curr. Biol. 16(8), 825-831. doi:10.1016/J.CUB.2006.03.059
    • (2006) Curr. Biol. , vol.16 , Issue.8 , pp. 825-831
    • Chuang, C.H.1    Carpenter, A.E.2    Fuchsova, B.3    Johnson, T.4    De Lanerolle, P.5    Belmont, A.S.6
  • 14
    • 0037459063 scopus 로고    scopus 로고
    • Considering nuclear compart-mentalization in the light of nuclear dynamics
    • doi:10.1016/S0092-8674(03)00078-3
    • Chubb, J. R., and Bickmore, W. A. (2003). Considering nuclear compart-mentalization in the light of nuclear dynamics. Cell 112(4), 403-406. doi:10.1016/S0092-8674(03)00078-3
    • (2003) Cell , vol.112 , Issue.4 , pp. 403-406
    • Chubb, J.R.1    Bickmore, W.A.2
  • 15
    • 77954899586 scopus 로고    scopus 로고
    • Epigenetic reprogramming: Enforcer or enabler of developmental fate?
    • doi:10.1111/J.1440-169X.2010.01185.X
    • Combes, A. N., and Whitelaw, E. (2010). Epigenetic reprogramming: enforcer or enabler of developmental fate? Dev. Growth Differ. 52(6), 483-491. doi:10.1111/J.1440-169X.2010.01185.X
    • (2010) Dev. Growth Differ. , vol.52 , Issue.6 , pp. 483-491
    • Combes, A.N.1    Whitelaw, E.2
  • 17
    • 0018072546 scopus 로고
    • Considerations on a laser-scanning microscope with high resolution and depth of field
    • Cremer, C., and Cremer, T. (1978). Considerations on a laser-scanning microscope with high resolution and depth of field. Microsc. Acta 81(1), 31-44.
    • (1978) Microsc. Acta , vol.81 , Issue.1 , pp. 31-44
    • Cremer, C.1    Cremer, T.2
  • 18
    • 0035316574 scopus 로고    scopus 로고
    • Chromosome territories, nuclear architecture and gene regulation in mammalian cells
    • doi:10.1038/35066075
    • Cremer, T., and Cremer, C. (2001). Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nat. Rev. Genet. 2(4), 292-301. doi:10.1038/35066075
    • (2001) Nat. Rev. Genet. , vol.2 , Issue.4 , pp. 292-301
    • Cremer, T.1    Cremer, C.2
  • 19
    • 33847775659 scopus 로고    scopus 로고
    • Rise, fall and resurrection of chromosome territories: A historical perspective. Part II. Fall and resurrection of chromosome territories during the 1950sto 1980s. Part III. Chromosome territories and the functional nuclear architecture: Experiments and models from the 1990stothe present
    • Cremer, T., and Cremer, C. (2006). Rise, fall and resurrection of chromosome territories: a historical perspective. Part II. Fall and resurrection of chromosome territories during the 1950sto 1980s. Part III. Chromosome territories and the functional nuclear architecture: experiments and models from the 1990stothe present.Eur. J. Histochem.50(4), 223-272.
    • (2006) Eur. J. Histochem. , vol.50 , Issue.4 , pp. 223-272
    • Cremer, T.1    Cremer, C.2
  • 20
    • 77954457349 scopus 로고    scopus 로고
    • Chromosome territories
    • doi:10.1101/CSHPERSPECT. A003889
    • Cremer, T., and Cremer, M. (2010). Chromosome territories. Cold Spring Harb. Perspect. Biol. 2(3), a003889. doi:10.1101/CSHPERSPECT. A003889
    • (2010) Cold Spring Harb. Perspect. Biol. , vol.2 , Issue.3
    • Cremer, T.1    Cremer, M.2
  • 21
    • 0033758019 scopus 로고    scopus 로고
    • Chromosome territories, interchromatin domain compartment, and nuclear matrix: An integrated view of the functional nuclear architecture
    • Cremer, T., Kreth, G., Koester, H., Fink, R. H., Heintzmann, R., Cremer, M., Solovei, I., Zink, D., and Cremer, C. (2000). Chromosome territories, interchromatin domain compartment, and nuclear matrix: an integrated view of the functional nuclear architecture. Crit. Rev. Eukaryot. Gene Expr. 10(2), 179-212
    • (2000) Crit. Rev. Eukaryot. Gene Expr. , vol.10 , Issue.2 , pp. 179-212
    • Cremer, T.1    Kreth, G.2    Koester, H.3    Fink, R.H.4    Heintzmann, R.5    Cremer, M.6    Solovei, I.7    Zink, D.8    Cremer, C.9
  • 22
    • 58749089649 scopus 로고    scopus 로고
    • Chromatin position in human HepG2 cells: Although being non-random, significantly changed in daughter cells
    • doi:10.1016/J.JSB.2008.10.007
    • Cvac?ková, Z., Mas?ata, M., Stane?k, D., Fidlerová, H., and Ras?ka, I. (2009). Chromatin position in human HepG2 cells: although being non-random, significantly changed in daughter cells. J. Struct. Biol. 165(2), 107-117. doi:10.1016/J.JSB.2008.10.007
    • (2009) J. Struct. Biol. , vol.165 , Issue.2 , pp. 107-117
    • Cvacková, Z.1    Masata, M.2    Stanek, D.3    Fidlerová, H.4    Raska, I.5
  • 23
    • 0023767293 scopus 로고
    • Chromatin motion in interphase nuclei, its modulation and its potential role in gene expression
    • De Boni, U. (1988). Chromatin motion in interphase nuclei, its modulation and its potential role in gene expression. Anticancer Res. 8(5A), 885-898.
    • (1988) Anticancer Res. , vol.8 , Issue.5 A , pp. 885-898
    • De Boni, U.1
  • 24
    • 0023000055 scopus 로고
    • Curvilinear, three-dimensional motion of chromatin domains and nucleoli in neuronal interphase nuclei
    • doi:10.1126/SCIENCE.3775367
    • De Boni, U., and Mintz, A.H. (1986). Curvilinear, three-dimensional motion of chromatin domains and nucleoli in neuronal interphase nuclei. Science 234(4778), 863-866. doi:10.1126/SCIENCE.3775367
    • (1986) Science , vol.234 , Issue.4778 , pp. 863-866
    • De Boni, U.1    Mintz, A.H.2
  • 25
    • 0037083376 scopus 로고    scopus 로고
    • Capturing chromosome conformation
    • doi:10.1126/SCIENCE.1067799
    • Dekker, J., Rippe, K., Dekker, M., and Kleckner, N. (2002). Capturing chromosome conformation. Science 295(5558), 1306-1311. doi:10.1126/SCIENCE. 1067799
    • (2002) Science , vol.295 , Issue.5558 , pp. 1306-1311
    • Dekker, J.1    Rippe, K.2    Dekker, M.3    Kleckner, N.4
  • 26
    • 15644364244 scopus 로고    scopus 로고
    • Separate and variably shaped chromosome arm domains are disclosed by chromosome arm painting in human cell nuclei
    • doi:10.1023/A:1009262223693
    • Dietzel, S., Jauch, A., Kienle, D., Qu, G., Holtgreve-Grez, H., et al. (1998). Separate and variably shaped chromosome arm domains are disclosed by chromosome arm painting in human cell nuclei. Chromosome Res. 6(1), 25-33. doi:10.1023/A:1009262223693
    • (1998) Chromosome Res. , vol.6 , Issue.1 , pp. 25-33
    • Dietzel, S.1    Jauch, A.2    Kienle, D.3    Qu, G.4    Holtgreve-Grez, H.5
  • 27
    • 77954499400 scopus 로고    scopus 로고
    • Influence of nuclear geometry on the formation of genetic rearrangements in human cells
    • doi:10.1667/RR2063.1
    • Durante, M., Pignalosa, D., Jansen, J. A., Walboomers, X. F., and Ritter, S. (2010). Influence of nuclear geometry on the formation of genetic rearrangements in human cells. Radiat. Res. 174(1), 20-26. doi:10.1667/RR2063.1
    • (2010) Radiat. Res. , vol.174 , Issue.1 , pp. 20-26
    • Durante, M.1    Pignalosa, D.2    Jansen, J.A.3    Walboomers, X.F.4    Ritter, S.5
  • 28
    • 4544304312 scopus 로고    scopus 로고
    • The functional architecture of the nucleus as analysed by ultrastructural cytochemistry
    • doi:10.1007/S00418-004-0681-1
    • Fakan, S. (2004). The functional architecture of the nucleus as analysed by ultrastructural cytochemistry. Histochem. Cell Biol. 122(2), 83-93. doi:10.1007/S00418-004-0681-1
    • (2004) Histochem. Cell Biol. , vol.122 , Issue.2 , pp. 83-93
    • Fakan, S.1
  • 29
    • 35649020707 scopus 로고    scopus 로고
    • The perichromatin region: A functional compartment in the nucleus that determines large-scale chromatin folding
    • doi:10.1016/J.SEMCDB. 2007.08.010
    • Fakan, S., and van Driel, R. (2007). The perichromatin region: a functional compartment in the nucleus that determines large-scale chromatin folding. Semin. Cell Dev. Biol. 18(5), 676-681. doi:10.1016/J.SEMCDB. 2007.08.010
    • (2007) Semin. Cell Dev. Biol. , vol.18 , Issue.5 , pp. 676-681
    • Fakan, S.1    Van Driel, R.2
  • 31
    • 34249307315 scopus 로고    scopus 로고
    • Nuclear organization of the genome and the potential for gene regulation
    • doi:10.1038/NATURE05916
    • Fraser, P., and Bickmore, W. (2007). Nuclear organization of the genome and the potential for gene regulation. Nature 447(7143), 413-417. doi:10.1038/NATURE05916
    • (2007) Nature , vol.447 , Issue.7143 , pp. 413-417
    • Fraser, P.1    Bickmore, W.2
  • 32
    • 0037165965 scopus 로고    scopus 로고
    • Visualizing chromatin dynamics in interphase nuclei
    • doi:10.1126/SCIENCE.1067703
    • Gasser, S. M. (2002). Visualizing chromatin dynamics in interphase nuclei. Science 296(5572), 1412-1416. doi:10.1126/SCIENCE.1067703
    • (2002) Science , vol.296 , Issue.5572 , pp. 1412-1416
    • Gasser, S.M.1
  • 33
    • 70249136846 scopus 로고    scopus 로고
    • Chromosome crosstalk in three dimensions
    • doi:10.1038/NATURE08453
    • Göndör, A., and Ohlsson, R. (2009). Chromosome crosstalk in three dimensions. Nature 461(7261), 212-217. doi:10.1038/NATURE08453
    • (2009) Nature , vol.461 , Issue.7261 , pp. 212-217
    • Göndör, A.1    Ohlsson, R.2
  • 34
    • 39449139894 scopus 로고    scopus 로고
    • High-resolution circular chromosome conformation capture assay
    • doi:10.1038/NPROT.2007.540
    • Göndör, A., Rougier, C., and Ohlsson, R. (2008). High-resolution circular chromosome conformation capture assay. Nat. Protoc. 3(2), 303-313. doi:10.1038/NPROT.2007.540
    • (2008) Nat. Protoc. , vol.3 , Issue.2 , pp. 303-313
    • Göndör, A.1    Rougier, C.2    Ohlsson, R.3
  • 35
    • 0000038626 scopus 로고
    • Studies on nuclear structure and function in Tetrahymena pyriformis: I. RNA synthesis in macro-and micro-nuclei
    • doi:10.1083/JCB.42.3.673
    • Gorovsky, M. A., and Woodard, J. (1969). Studies on nuclear structure and function in Tetrahymena pyriformis: I. RNA synthesis in macro-and micro-nuclei. J. Cell Biol. 42(3), 673-682. doi:10.1083/JCB.42.3.673
    • (1969) J. Cell Biol. , vol.42 , Issue.3 , pp. 673-682
    • Gorovsky, M.A.1    Woodard, J.2
  • 36
    • 45149084413 scopus 로고    scopus 로고
    • Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
    • doi:10.1038/NATURE06947
    • Guelen, L., Pagie, L., Brasset, E., Meuleman, W., Faza, M. B., et al. (2008). Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions. Nature 453(7197), 948-951. doi:10.1038/NATURE06947
    • (2008) Nature , vol.453 , Issue.7197 , pp. 948-951
    • Guelen, L.1    Pagie, L.2    Brasset, E.3    Meuleman, W.4    Faza, M.B.5
  • 37
    • 55949134303 scopus 로고    scopus 로고
    • DNA methylomes, histone codes and miRNAs: Tying it all together
    • doi:10.1016/J.BIOCEL.2008.09.005
    • Guil, S., and Esteller, M. (2009). DNA methylomes, histone codes and miRNAs: tying it all together. Int. J. Biochem. Cell Biol. 41(1), 87-95. doi:10.1016/J.BIOCEL.2008.09.005
    • (2009) Int. J. Biochem. Cell Biol. , vol.41 , Issue.1 , pp. 87-95
    • Guil, S.1    Esteller, M.2
  • 39
    • 77954816725 scopus 로고    scopus 로고
    • Epigenetic reprogramming-taking a lesson from the embryo
    • doi:10.1016/J.CEB. 2010.04.011
    • Hajkova, P. (2010). Epigenetic reprogramming-taking a lesson from the embryo. Curr. Opin. Cell Biol. 22(3), 342-350. doi:10.1016/J.CEB. 2010.04.011
    • (2010) Curr. Opin. Cell Biol. , vol.22 , Issue.3 , pp. 342-350
    • Hajkova, P.1
  • 40
    • 34249945258 scopus 로고    scopus 로고
    • Far-field optical nanoscopy
    • doi:10.1126/SCIENCE.1137395
    • Hell, S. W. (2007). Far-field optical nanoscopy. Science 316(5828), 1153-1158. doi:10.1126/SCIENCE.1137395
    • (2007) Science , vol.316 , Issue.5828 , pp. 1153-1158
    • Hell, S.W.1
  • 41
    • 58049208232 scopus 로고    scopus 로고
    • Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules
    • doi:10.1073/PNAS.0810634105
    • Hu, Q., Kwon, Y.S., Nunez, E., Cardamone, M.D., Hutt,K. R., et al. (2008). Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules. Proc. Natl. Acad. Sci. USA 105(49), 19199-19 204. doi:10.1073/PNAS.0810634105
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , Issue.49 , pp. 19199-19204
    • Hu, Q.1    Kwon, Y.S.2    Nunez, E.3    Cardamone, M.D.4    Huttk., R.5
  • 42
    • 77952936833 scopus 로고    scopus 로고
    • Chromatin dynamics
    • doi:10.1146/ANNUREV.BIOPHYS.093008. 131348
    • Hübner, M. R., and Spector, D. L. (2010). Chromatin dynamics. Annu. Rev.Biophys. 39, 471-489. doi:10.1146/ANNUREV.BIOPHYS.093008. 131348
    • (2010) Annu. Rev.Biophys. , vol.39 , pp. 471-489
    • Hübner, M.R.1    Spector, D.L.2
  • 43
    • 0035839136 scopus 로고    scopus 로고
    • Translating the histone code
    • doi:10.1126/SCIENCE.1063127
    • Jenuwein, T., and Allis, C. D. (2001). Translating the histone code. Science 293(5532), 1074-1080. doi:10.1126/SCIENCE.1063127
    • (2001) Science , vol.293 , Issue.5532 , pp. 1074-1080
    • Jenuwein, T.1    Allis, C.D.2
  • 44
    • 60349089645 scopus 로고    scopus 로고
    • Nucleosome positioning and gene regulation: Advances through genomics
    • doi:10.1038/NRG2522
    • Jiang, C., and Pugh, B. F. (2009). Nucleosome positioning and gene regulation: advances through genomics. Nat. Rev. Genet. 10(3), 161-172. doi:10.1038/NRG2522
    • (2009) Nat. Rev. Genet. , vol.10 , Issue.3 , pp. 161-172
    • Jiang, C.1    Pugh, B.F.2
  • 45
    • 77952356340 scopus 로고    scopus 로고
    • Activation of oestrogen-responsive genes does not require their nuclear co-localization
    • doi:10.1371/JOURNAL.PGEN.1000922
    • Kocanova, S., Kerr, E. A., Rafique, S., Boyle, S., Katz, E., Caze-Subra, S., Bickmore, W. A., and Bystricky, K. (2010). Activation of oestrogen-responsive genes does not require their nuclear co-localization. PLoS Genet. 6(4), e1000922. doi:10.1371/JOURNAL.PGEN.1000922
    • (2010) PLoS Genet. , vol.6 , Issue.4
    • Kocanova, S.1    Kerr, E.A.2    Rafique, S.3    Boyle, S.4    Katz, E.5    Caze-Subra, S.6    Bickmore, W.A.7    Bystricky, K.8
  • 46
    • 67349252324 scopus 로고    scopus 로고
    • Changes of higher-order chromatin arrangements during major genome activationin bovine preimplantation embryos
    • doi:10.1016/J.YEXCR.2009.02.016
    • Koehler, D., Zakhartchenko, V., Froenicke, L., Stone, G., Stanyon, R., Wolf, E., Cremer, T., and Brero, A. (2009). Changes of higher-order chromatin arrangements during major genome activationin bovine preimplantation embryos. Exp. Cell Res. 315(12), 2053-2063. doi:10.1016/J.YEXCR.2009.02.016
    • (2009) Exp. Cell Res. , vol.315 , Issue.12 , pp. 2053-2063
    • Koehler, D.1    Zakhartchenko, V.2    Froenicke, L.3    Stone, G.4    Stanyon, R.5    Wolf, E.6    Cremer, T.7    Brero, A.8
  • 47
    • 2942679507 scopus 로고    scopus 로고
    • Form follows function: The genomic organization of cellular differentiation
    • doi:10.1101/GAD.1209304
    • Kosak, S. T., and Groudine, M. (2004a). Form follows function: the genomic organization of cellular differentiation. Genes Dev. 18(12), 1371-1384. doi:10.1101/GAD.1209304
    • (2004) Genes Dev. , vol.18 , Issue.12 , pp. 1371-1384
    • Kosak, S.T.1    Groudine, M.2
  • 48
    • 7444260237 scopus 로고    scopus 로고
    • Gene order and dynamic domains
    • doi:10.1126/SCIENCE.1103864
    • Kosak, S. T., and Groudine, M. (2004b). Gene order and dynamic domains. Science 306(5696), 644-647. doi:10.1126/SCIENCE.1103864
    • (2004) Science , vol.306 , Issue.5696 , pp. 644-647
    • Kosak, S.T.1    Groudine, M.2
  • 49
    • 34249945361 scopus 로고    scopus 로고
    • Cell type-specific quantitative predictions of radiation-induced chromosome aberrations: A computer model approach
    • doi:10.1667/RR0691.1
    • Kreth, G., Pazhanisamy, S. K., Hausmann, M., and Cremer, C. (2007). Cell type-specific quantitative predictions of radiation-induced chromosome aberrations: a computer model approach. Radiat. Res. 167(5), 515-525. doi:10.1667/RR0691.1
    • (2007) Radiat. Res. , vol.167 , Issue.5 , pp. 515-525
    • Kreth, G.1    Pazhanisamy, S.K.2    Hausmann, M.3    Cremer, C.4
  • 50
    • 33846283384 scopus 로고    scopus 로고
    • Dynamic genome architecture in the nuclear space: Regulation of gene expression in three dimensions
    • doi:10.1038/NRG2041
    • Lanctôt, C., Cheutin, T., Cremer, M., Cavalli, G., and Cremer, T. (2007a). Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions. Nat. Rev. Genet. 8(2), 104-115. doi:10.1038/NRG2041
    • (2007) Nat. Rev. Genet. , vol.8 , Issue.2 , pp. 104-115
    • Lanctôt, C.1    Cheutin, T.2    Cremer, M.3    Cavalli, G.4    Cremer, T.5
  • 51
    • 33947712256 scopus 로고    scopus 로고
    • Positioning of the mouse Hox gene clusters in the nuclei of developing embryos and differentiating embryoid bodies
    • doi:10.1016/J.YEXCR.2007.01.027
    • Lanctôt, C., Kaspar, C., and Cremer, T. (2007b). Positioning of the mouse Hox gene clusters in the nuclei of developing embryos and differentiating embryoid bodies. Exp. Cell Res. 313(7), 1449-1459. doi:10.1016/J.YEXCR.2007.01. 027
    • (2007) Exp. Cell Res. , vol.313 , Issue.7 , pp. 1449-1459
    • Lanctôt, C.1    Kaspar, C.2    Cremer, T.3
  • 52
    • 0030043993 scopus 로고    scopus 로고
    • Homologous association of oppositely imprinted chromosomal domains
    • doi:10.1126/SCIENCE.272.5262.725
    • LaSalle, J. M., and Lalande, M. (1996). Homologous association of oppositely imprinted chromosomal domains. Science 272(5262), 725-728. doi:10.1126/SCIENCE.272.5262.725
    • (1996) Science , vol.272 , Issue.5262 , pp. 725-728
    • Lasalle, J.M.1    Lalande, M.2
  • 54
    • 70349873824 scopus 로고    scopus 로고
    • Comprehensive mapping of long-range interactions reveals folding principles of the human genome
    • doi:10.1126/SCIENCE.1181369
    • Lieberman-Aiden, E., van Berkum, N. L., Williams, L., Imakaev, M., Ragoczy, T., et al. (2009). Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science 326(5950), 289-293. doi:10.1126/SCIENCE.1181369
    • (2009) Science , vol.326 , Issue.5950 , pp. 289-293
    • Lieberman-Aiden, E.1    Van Berkum, N.L.2    Williams, L.3    Imakaev, M.4    Ragoczy, T.5
  • 55
    • 0021235210 scopus 로고
    • Different central nervous system cell types display distinct and non-random arrangements of satellite DNA sequences
    • doi:10.1073/PNAS.81. 10.3123
    • Manuelidis, L. (1984). Different central nervous system cell types display distinct and non-random arrangements of satellite DNA sequences. Proc. Natl. Acad. Sci. USA 81(10), 3123-3127. doi:10.1073/PNAS.81. 10.3123
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , Issue.10 , pp. 3123-3127
    • Manuelidis, L.1
  • 56
    • 33746631685 scopus 로고    scopus 로고
    • Architectural reorganization of the nuclei upon transfer into oocytes accompanies genome reprogramming
    • doi:10.1002/MRD.20506
    • Martin, C., Brochard, V., Migne, C., Zink, D., Debey, P., and Beaujean, N. (2006). Architectural reorganization of the nuclei upon transfer into oocytes accompanies genome reprogramming. Mol. Reprod. Dev. 73(9), 1102-1111. doi:10.1002/MRD.20506
    • (2006) Mol. Reprod. Dev. , vol.73 , Issue.9 , pp. 1102-1111
    • Martin, C.1    Brochard, V.2    Migne, C.3    Zink, D.4    Debey, P.5    Beaujean, N.6
  • 57
    • 0034630503 scopus 로고    scopus 로고
    • Nuclear topology of murine, cerebellar Purkinje neurons: Changes as a function of development
    • doi:10.1006/EXCR.1999.4793
    • Martou, G., and De Boni, U. (2000). Nuclear topology of murine, cerebellar Purkinje neurons: changes as a function of development. Exp. Cell Res. 256(1), 131-139. doi:10.1006/EXCR.1999.4793
    • (2000) Exp. Cell Res. , vol.256 , Issue.1 , pp. 131-139
    • Martou, G.1    De Boni, U.2
  • 59
    • 62649137535 scopus 로고    scopus 로고
    • Spatially confined folding of chromatin in the interphase nucleus
    • doi:10.1073/PNAS.0809501106
    • Mateos-Langerak, J., Bohn, M., de Leeuw, W., Giromus, O., Manders, E. M., et al. (2009). Spatially confined folding of chromatin in the interphase nucleus. Proc. Natl. Acad. Sci. USA 106(10), 3812-3817. doi:10.1073/PNAS. 0809501106
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , Issue.10 , pp. 3812-3817
    • Mateos-Langerak, J.1    Bohn, M.2    De Leeuw, W.3    Giromus, O.4    Manders, E.M.5
  • 60
    • 77954819820 scopus 로고    scopus 로고
    • Chromatin plasticity and genome organization in pluripotent embryonic stem cells
    • doi:10.1016/J.CEB.2010.02.001
    • Mattout, A., and Meshorer, E. (2010). Chromatin plasticity and genome organization in pluripotent embryonic stem cells. Curr. Opin. Cell Biol. 22(3), 334-341. doi:10.1016/J.CEB.2010.02.001
    • (2010) Curr. Opin. Cell Biol. , vol.22 , Issue.3 , pp. 334-341
    • Mattout, A.1    Meshorer, E.2
  • 61
    • 77950920142 scopus 로고    scopus 로고
    • The spatial dynamics of tissue-specific promoters during C. elegans development
    • doi:10.1101/GAD.559610
    • Meister, P., Towbin, B. D., Pike, B. L., Ponti, A., and Gasser, S. M. (2010). The spatial dynamics of tissue-specific promoters during C. elegans development. Genes Dev. 24(8), 766-782. doi:10.1101/GAD.559610
    • (2010) Genes Dev. , vol.24 , Issue.8 , pp. 766-782
    • Meister, P.1    Towbin, B.D.2    Pike, B.L.3    Ponti, A.4    Gasser, S.M.5
  • 62
    • 34248162957 scopus 로고    scopus 로고
    • Epigenomic differentiationin mouse preimplantation nuclei of biparental, parthenote and cloned embryos
    • Merico, V., Barbieri, J., Zuccotti, M., Joffe, B., Cremer, T., Redi, C. A., Solovei, I., and Garagna,S. (2007). Epigenomic differentiationin mouse preimplantation nuclei of biparental, parthenote and cloned embryos. Chromosome Res. 15(3), 341-360.
    • (2007) Chromosome Res. , vol.15 , Issue.3 , pp. 341-360
    • Merico, V.1    Barbieri, J.2    Zuccotti, M.3    Joffe, B.4    Cremer, T.5    Redi, C.A.6    Solovei, I.7    Garagna, S.8
  • 63
    • 33847077659 scopus 로고    scopus 로고
    • Beyond the sequence: Cellular organization of genome function
    • doi:10.1016/J.CELL.2007.01.028
    • Misteli, T. (2007). Beyond the sequence: cellular organization of genome function. Cell 128(4), 787-800. doi:10.1016/J.CELL.2007.01.028
    • (2007) Cell , vol.128 , Issue.4 , pp. 787-800
    • Misteli, T.1
  • 64
    • 34248593510 scopus 로고    scopus 로고
    • Nuclear reorganisation and chromatin decondensation are conserved, but distinct, mechanisms linked to Hox gene activation
    • doi:10.1242/DEV.02779
    • Morey, C., Da Silva, N. R., Perry, P., and Bickmore, W. A. (2007). Nuclear reorganisation and chromatin decondensation are conserved, but distinct, mechanisms linked to Hox gene activation. Development 134(5), 909-919. doi:10.1242/DEV.02779
    • (2007) Development , vol.134 , Issue.5 , pp. 909-919
    • Morey, C.1    Da Silva, N.R.2    Perry, P.3    Bickmore, W.A.4
  • 65
    • 67650064596 scopus 로고    scopus 로고
    • Lack of bystander activation shows that localization exterior to chromosome territories is not sufficient to up-regulate gene expression
    • doi:10.1101/GR.089045.108
    • Morey, C., Kress, C., and Bickmore, W. A. (2009). Lack of bystander activation shows that localization exterior to chromosome territories is not sufficient to up-regulate gene expression. Genome Res. 19(7), 1184-1194. doi:10.1101/GR.089045.108
    • (2009) Genome Res. , vol.19 , Issue.7 , pp. 1184-1194
    • Morey, C.1    Kress, C.2    Bickmore, W.A.3
  • 66
    • 77955393744 scopus 로고    scopus 로고
    • Stable morphology, but dynamic internal reorganisation, of interphase human chromosomes in living cells
    • doi:10.1371/JOURNAL.PONE.0011560
    • Müller, I., Boyle, S., Singer, R. H., Bickmore, W. A., and Chubb, J. R. (2010). Stable morphology, but dynamic internal reorganisation, of interphase human chromosomes in living cells. PLoS ONE 5(7), e11560. doi:10.1371/JOURNAL.PONE.0011560
    • (2010) PLoS ONE , vol.5 , Issue.7
    • Müller, I.1    Boyle, S.2    Singer, R.H.3    Bickmore, W.A.4    Chubb, J.R.5
  • 67
    • 0033593366 scopus 로고    scopus 로고
    • Compartmentalization of inter-phase chromosomes observed in simulation and experiment
    • doi:10.1006/JMBI.1998.2361
    • Münkel, C., Eils, R., Dietzel, S., Zink, D., Mehring, C., Wedemann, G., Cremer, T., and Langowski, J. (1999). Compartmentalization of inter-phase chromosomes observed in simulation and experiment. J. Mol. Biol. 285(3), 1053-1065. doi:10.1006/JMBI.1998.2361
    • (1999) J. Mol. Biol. , vol.285 , Issue.3 , pp. 1053-1065
    • Münkel, C.1    Eils, R.2    Dietzel, S.3    Zink, D.4    Mehring, C.5    Wedemann, G.6    Cremer, T.7    Langowski, J.8
  • 68
    • 59849126153 scopus 로고    scopus 로고
    • Histone modifications dictate specific biological readouts
    • doi:10.1016/S1673-8527(08)60094-6
    • Munshi, A., Shafi, G., Aliya, N., and Jyothy, A. (2009). Histone modifications dictate specific biological readouts. J. Genet. Genomics 36(2), 75-88. doi:10.1016/S1673-8527(08)60094-6
    • (2009) J. Genet. Genomics , vol.36 , Issue.2 , pp. 75-88
    • Munshi, A.1    Shafi, G.2    Aliya, N.3    Jyothy, A.4
  • 70
    • 34548210885 scopus 로고    scopus 로고
    • Myc dynamically and preferentially relocates to a transcription factory occupied by Igh
    • doi:10.1371/JOURNAL.PBIO. 0050192
    • Osborne, C. S., Chakalova, L., Mitchell, J. A., Horton, A., et al. (2007). Myc dynamically and preferentially relocates to a transcription factory occupied by Igh. PLoS Biol. 5(8), e192. doi:10.1371/JOURNAL.PBIO. 0050192
    • (2007) PLoS Biol. , vol.5 , Issue.8
    • Osborne, C.S.1    Chakalova, L.2    Mitchell, J.A.3    Horton, A.4
  • 71
    • 33646532278 scopus 로고    scopus 로고
    • Nucleus and gene regulation
    • doi:10.1016/J.CEB.2006.04.004
    • Pederson, T., and Singer, R. H. (2006). Nucleus and gene regulation. Curr. Opin. Cell Biol. 18(3), 229-230. doi:10.1016/J.CEB.2006.04.004
    • (2006) Curr. Opin. Cell Biol. , vol.18 , Issue.3 , pp. 229-230
    • Pederson, T.1    Singer, R.H.2
  • 72
    • 75149189172 scopus 로고    scopus 로고
    • Dynamics of constitutive heterochromatin: Two contrasted kineticsof genome restructuring in early cloned bovine embryos
    • doi:10.1530/REP-08-0435
    • Pichugin, A., Le Bourhis, D., Adenot, P., Lehmann, G., Audouard, C., Renard, J. P., Vignon, X., and Beaujean, N. (2010). Dynamics of constitutive heterochromatin: two contrasted kineticsof genome restructuring in early cloned bovine embryos. Reproduction 139(1), 129-137. doi:10.1530/REP-08-0435
    • Reproduction , vol.139 , Issue.1 , pp. 129-137
    • Pichugin, A.1    Le Bourhis, D.2    Adenot, P.3    Lehmann, G.4    Audouard, C.5    Renard, J.P.6    Vignon, X.7
  • 73
    • 33748289518 scopus 로고    scopus 로고
    • Characterization of the Drosophila melanogaster genome at the nuclear lamina
    • doi:10.1038/NG1852
    • Pickersgill, H., Kalverda, B., de Wit, E., Talhout, W., Fornerod, M., and van Steensel, B. (2006). Characterization of the Drosophila melanogaster genome at the nuclear lamina. Nat. Genet. 38(9), 1005-1014. doi:10.1038/NG1852
    • (2006) Nat. Genet. , vol.38 , Issue.9 , pp. 1005-1014
    • Pickersgill, H.1    Kalverda, B.2    De Wit, E.3    Talhout, W.4    Fornerod, M.5    Van Steensel, B.6
  • 74
    • 77249148019 scopus 로고    scopus 로고
    • Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency
    • doi:10.1038/NATURE08829
    • Popp, C., Dean, W., Feng, S., Cokus, S. J., Andrews, S., Pellegrini, M., Jacobsen, S. E., and Reik, W. (2010). Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency. Nature 463(7284), 1101-1105. doi:10.1038/NATURE08829
    • (2010) Nature , vol.463 , Issue.7284 , pp. 1101-1105
    • Popp, C.1    Dean, W.2    Feng, S.3    Cokus, S.J.4    Andrews, S.5    Pellegrini, M.6    Jacobsen, S.E.7    Reik, W.8
  • 75
    • 26244452986 scopus 로고    scopus 로고
    • Exploiting nuclear duality of ciliates to analyse topological requirements for DNA replication and transcription
    • doi:10.1242/JCS.02497
    • Postberg, J., Alexandrova, O., Cremer, T., and Lipps, H. J. (2005). Exploiting nuclear duality of ciliates to analyse topological requirements for DNA replication and transcription. J. Cell Sci. 118(17), 3973-3983. doi:10.1242/JCS.02497
    • (2005) J. Cell Sci. , vol.118 , Issue.17 , pp. 3973-3983
    • Postberg, J.1    Alexandrova, O.2    Cremer, T.3    Lipps, H.J.4
  • 76
    • 59949100423 scopus 로고    scopus 로고
    • Spatial and temporal plasticity of chromatin during programmed DNA reorganization in Stylonychia macronuclear development
    • doi:10.1186/1756-8935-1-3
    • Postberg, J., Heyse, K., Cremer, M., Cremer, T., and Lipps, H. J. (2008). Spatial and temporal plasticity of chromatin during programmed DNA reorganization in Stylonychia macronuclear development. Epigenetics Chromatin 1(1), 3. doi:10.1186/1756-8935-1-3
    • (2008) Epigenetics Chromatin , vol.1 , Issue.1 , pp. 3
    • Postberg, J.1    Heyse, K.2    Cremer, M.3    Cremer, T.4    Lipps, H.J.5
  • 77
    • 84879171166 scopus 로고    scopus 로고
    • Evolutionary origin of the cell nucleus and its functional architecture
    • doi:10.1042/BSE0480001
    • Postberg, J., Lipps, H. J., and Cremer, T. (2010). Evolutionary origin of the cell nucleus and its functional architecture.Essays Biochem.48(1), 1-24. doi:10.1042/BSE0480001
    • (2010) Essays Biochem , vol.48 , Issue.1 , pp. 1-24
    • Postberg, J.1    Lipps, H.J.2    Cremer, T.3
  • 79
    • 35548948498 scopus 로고    scopus 로고
    • Dynamic organization of the cell nucleus
    • doi:10.1016/J.GDE.2007.08.007
    • Rippe, K. (2007). Dynamic organization of the cell nucleus. Curr. Opin. Genet. Dev. 17(5), 373-380. doi:10.1016/J.GDE.2007.08.007
    • (2007) Curr. Opin. Genet. Dev. , vol.17 , Issue.5 , pp. 373-380
    • Rippe, K.1
  • 80
    • 43149102089 scopus 로고    scopus 로고
    • Spatial quantitative analysis of fluorescently labelled nuclear structures: Problems, methods, pitfalls
    • doi:10.1007/S10577-008-1236-4
    • Ronneberger, O., Baddeley, D., Scheipl, F., Verveer, P. J., Burkhardt, H., Cremer, C., Fahrmeir, L., Cremer, T., and Joffe, B. (2008). Spatial quantitative analysis of fluorescently labelled nuclear structures: problems, methods, pitfalls. Chromosome Res. 16, 523-562. doi:10.1007/S10577-008-1236-4
    • (2008) Chromosome Res. , vol.16 , pp. 523-562
    • Ronneberger, O.1    Baddeley, D.2    Scheipl, F.3    Verveer, P.J.4    Burkhardt, H.5    Cremer, C.6    Fahrmeir, L.7    Cremer, T.8    Joffe, B.9
  • 81
    • 77953012431 scopus 로고    scopus 로고
    • Looping probabilities in model interphase chromosomes
    • doi:10.1016/J.BPJ.2010.01.054
    • Rosa, A., Becker, N. B., and Everaers, R. (2010). Looping probabilities in model interphase chromosomes. Biophys. J. 98(11), 2410-2419. doi:10.1016/J.BPJ.2010.01.054
    • (2010) Biophys. J. , vol.98 , Issue.11 , pp. 2410-2419
    • Rosa, A.1    Becker, N.B.2    Everaers, R.3
  • 82
    • 70349847560 scopus 로고    scopus 로고
    • Revealing the high-resolution three-dimensional network of chromatin and interchromatin space: A novel electron-microscopic approach to reconstructing nuclear architecture
    • doi:10.1007/S10577-009-9070-X
    • Rouquette, J., Genoud, C., Vazquez-Nin, G. H., Kraus, B., Cremer, T., and Fakan, S. (2009). Revealing the high-resolution three-dimensional network of chromatin and interchromatin space: a novel electron-microscopic approach to reconstructing nuclear architecture. Chromosome Res. 17(6), 801-810. doi:10.1007/S10577-009-9070-X
    • (2009) Chromosome Res. , vol.17 , Issue.6 , pp. 801-810
    • Rouquette, J.1    Genoud, C.2    Vazquez-Nin, G.H.3    Kraus, B.4    Cremer, T.5    Fakan, S.6
  • 83
    • 77954457057 scopus 로고    scopus 로고
    • Functional nuclear architecture studied by microscopy: Present and future
    • doi:10.1016/S1937-6448(10)82001-5
    • Rouquette, J., Cremer, C., Cremer, T., and Fakan, S. (2010). Functional nuclear architecture studied by microscopy: present and future. Int. Rev. Cell Mol. Biol. 282(3), 1-90. doi:10.1016/S1937-6448(10)82001-5
    • (2010) Int. Rev. Cell Mol. Biol. , vol.282 , Issue.3 , pp. 1-90
    • Rouquette, J.1    Cremer, C.2    Cremer, T.3    Fakan, S.4
  • 84
    • 0028965156 scopus 로고
    • A random-walk/giant-loop model for interphase chromosomes
    • doi:10.1073/PNAS.92.7.2710
    • Sachs, R.K., van den Engh, G., Trask, B., Yokota, H., and Hearst, J.E.(1995). A random-walk/giant-loop model for interphase chromosomes. Proc. Natl. Acad. Sci. USA 92(7), 2710-2714. doi:10.1073/PNAS.92.7.2710
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , Issue.7 , pp. 2710-2714
    • Sachs, R.K.1    Van Den Engh, G.2    Trask, B.3    Yokota, H.4    Hearst, J.E.5
  • 85
    • 45549091077 scopus 로고    scopus 로고
    • Subdiffraction multicolour imaging of the nuclear periphery with 3D structured-illumination microscopy
    • doi:10.1126/SCIENCE.1156947
    • Schermelleh, L., Carlton,P.M., Haase, S., Shao, L., Winoto, L.,et al.(2008). Subdiffraction multicolour imaging of the nuclear periphery with 3D structured-illumination microscopy. Science 320(5881), 1332-1336. doi:10.1126/SCIENCE.1156947
    • (2008) Science , vol.320 , Issue.5881 , pp. 1332-1336
    • Schermelleh, L.1    Carlto, P.M.2    Haase, S.3    Shao, L.4    Winoto, L.5
  • 86
    • 77954995399 scopus 로고    scopus 로고
    • A guide to super-resolution fluorescence microscopy
    • doi:10.1083/JCB.201002018
    • Schermelleh, L., Heintzmann, R., and Leonhardt, H. (2010). A guide to super-resolution fluorescence microscopy. J. Cell Biol. 190(2), 165-175. doi:10.1083/JCB.201002018
    • (2010) J. Cell Biol. , vol.190 , Issue.2 , pp. 165-175
    • Schermelleh, L.1    Heintzmann, R.2    Leonhardt, H.3
  • 87
    • 73349090560 scopus 로고    scopus 로고
    • Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells
    • doi:10.1038/NG.496
    • Schoenfelder, S., Sexton, T., Chakalova, L., Cope, N. F., Horton, A., et al. (2010a). Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells. Nat. Genet. 42(1), 53-61. doi:10.1038/NG.496
    • (2010) Nat. Genet. , vol.42 , Issue.1 , pp. 53-61
    • Schoenfelder, S.1    Sexton, T.2    Chakalova, L.3    Cope, N.F.4    Horton, A.5
  • 88
    • 77952242784 scopus 로고    scopus 로고
    • The transcriptional interactome: Gene expression in 3D
    • doi:10.1016/J.GDE.2010.02.002
    • Schoenfelder, S., Clay, I., and Fraser, P. (2010b). The transcriptional interactome: gene expression in 3D. Curr. Opin. Genet. Dev. 20(2), 127-133. doi:10.1016/J.GDE.2010.02.002
    • Curr. Opin. Genet. Dev. , vol.20 , Issue.2 , pp. 127-133
    • Schoenfelder, S.1    Clay, I.2
  • 89
    • 0141706933 scopus 로고    scopus 로고
    • Clustering of multiple specific genes and gene-rich R-bands around SC-35 domains: Evidence for local euchromatic neighbourhoods
    • doi:10.1083/JCB.200303131
    • Shopland, L. S., Johnson, C. V., Byron, M., McNeil, J., and Lawrence, J. B. (2003). Clustering of multiple specific genes and gene-rich R-bands around SC-35 domains: evidence for local euchromatic neighbourhoods. J. Cell Biol. 162(6), 981-990. doi:10.1083/JCB.200303131
    • (2003) J. Cell Biol. , vol.162 , Issue.6 , pp. 981-990
    • Shopland, L.S.1    Johnson, C.V.2    Byron, M.3    McNeil, J.4    Lawrence, J.B.5
  • 90
    • 0036349409 scopus 로고    scopus 로고
    • Spatial preservation of nuclear chromatin architecture during three-dimensional fluorescence in situ hybridization (3D-FISH
    • doi:10.1006/EXCR.2002.5513
    • Solovei, I., Cavallo, A., Schermelleh, L., Jaunin, F., Scasselati, C., Cmarko, D., Cremer, C., Fakan, S., and Cremer, T. (2002). Spatial preservation of nuclear chromatin architecture during three-dimensional fluorescence in situ hybridization (3D-FISH). Exp. Cell Res. 276(1), 10-23. doi:10.1006/EXCR.2002. 5513
    • (2002) Exp. Cell Res. , vol.276 , Issue.1 , pp. 10-23
    • Solovei, I.1    Cavallo, A.2    Schermelleh, L.3    Jaunin, F.4    Scasselati, C.5    Cmarko, D.6    Cremer, C.7    Fakan, S.8    Cremer, T.9
  • 91
    • 3543046143 scopus 로고    scopus 로고
    • Differences in centromere positioning of cycling and postmitotic human cell types
    • doi:10.1007/S00412-004-0287-3
    • Solovei, I., Schermelleh, L., Düring, K., Engelhardt, A., Stein, S., Cremer, C., and Cremer, T. (2004). Differences in centromere positioning of cycling and postmitotic human cell types. Chromosoma 112(8), 410-423. doi:10.1007/S00412-004-0287-3
    • (2004) Chromosoma , vol.112 , Issue.8 , pp. 410-423
    • Solovei, I.1    Schermelleh, L.2    Düring, K.3    Engelhardt, A.4    Stein, S.5    Cremer, C.6    Cremer, T.7
  • 92
    • 64249139170 scopus 로고    scopus 로고
    • Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution
    • doi:10.1016/J.CELL.2009.01.052
    • Solovei, I., Kreysing, M., Lanctôt, C., Kösem, S., Peichl, L., Cremer, T., Guck, J., and Joffe, B. (2009). Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution. Cell 137(2), 356-368. doi:10.1016/J.CELL.2009.01.052
    • (2009) Cell , vol.137 , Issue.2 , pp. 356-368
    • Solovei, I.1    Kreysing, M.2    Lanctôt, C.3    Kösem, S.4    Peichl, L.5    Cremer, T.6    Guck, J.7    Joffe, B.8
  • 93
    • 0042767995 scopus 로고    scopus 로고
    • The dynamics of chromosome organization and gene regulation
    • doi:10.1146/ANNUREV.BIOCHEM.72.121801.161724
    • Spector, D. L. (2003). The dynamics of chromosome organization and gene regulation. Annu. Rev. Biochem. 72, 573-608. doi:10.1146/ANNUREV.BIOCHEM.72. 121801.161724
    • (2003) Annu. Rev. Biochem. , vol.72 , pp. 573-608
    • Spector, D.L.1
  • 94
    • 20444494936 scopus 로고    scopus 로고
    • Interchromosomal associations between alternatively expressed loci
    • doi:10.1038/NATURE03574
    • Spilianakis, C. G., Lalioti, M. D., Town, T., Lee, G. R., and Flavell, R. A. (2005). Interchromosomal associations between alternatively expressed loci. Nature 435(7042), 637-645. doi:10.1038/NATURE03574
    • (2005) Nature , vol.435 , Issue.7042 , pp. 637-645
    • Spilianakis, C.G.1    Lalioti, M.D.2    Town, T.3    Lee, G.R.4    Flavell, R.5
  • 95
    • 0034610814 scopus 로고    scopus 로고
    • The language of covalent histone odifications
    • doi:10.1038/47412
    • Strahl, B. D., and Allis, C. D. (2000). The language of covalent histone odifications. Nature 403(6765), 41-45. doi:10.1038/47412
    • (2000) Nature , vol.403 , Issue.6765 , pp. 41-45
    • Strahl, B.D.1    Allis, C.D.2
  • 96
    • 77954457403 scopus 로고    scopus 로고
    • 4D chromatin dynamics in cycling cells: Theodor Boveri's hypotheses revisited
    • doi:10.4161/NUCL.1.3.11969
    • Strickfaden, H., Zunhammer, A., van Koningsbruggen, S., Köhler, D., and Cremer, T. (2010). 4D chromatin dynamics in cycling cells: Theodor Boveri's hypotheses revisited. Nucleus 1(3), 284-297. doi:10.4161/NUCL.1.3.11969
    • (2010) Nucleus , vol.1 , Issue.3 , pp. 284-297
    • Strickfaden, H.1    Zunhammer, A.2    Van Koningsbruggen, S.3    Köhler, D.4    Cremer, T.5
  • 97
    • 10944252995 scopus 로고    scopus 로고
    • The function of nuclear architecture: A genetic approach
    • doi:10.1146/ANNUREV.GENET.37.110801.142705
    • Taddei, A., Hediger, F., Neumann, F. R., and Gasser, S. M. (2004). The function of nuclear architecture: a genetic approach. Annu. Rev. Genet. 38, 305-345. doi:10.1146/ANNUREV.GENET.37.110801.142705
    • (2004) Annu. Rev. Genet. , vol.38 , pp. 305-345
    • Taddei, A.1    Hediger, F.2    Neumann, F.R.3    Gasser, S.M.4
  • 98
    • 52949133457 scopus 로고    scopus 로고
    • The meaning of gene positioning
    • doi:10.1016/J.CELL.2008.09.026
    • Takizawa, T., Meaburn, K. J., and Misteli, T. (2008). The meaning of gene positioning. Cell 135(1), 9-13. doi:10.1016/J.CELL.2008.09.026
    • (2008) Cell , vol.135 , Issue.1 , pp. 9-13
    • Takizawa, T.1    Meaburn, K.J.2    Misteli, T.3
  • 99
    • 35448988085 scopus 로고    scopus 로고
    • Maintenance of imprinting and nuclear architecture in cycling cells
    • doi:10.1073/PNAS.0704285104
    • Teller, K., Solovei, I., Buiting, K., Horsthemke, B., and Cremer, T. (2007). Maintenance of imprinting and nuclear architecture in cycling cells. Proc. Natl. Acad. Sci. USA 104(38), 14970-14 975. doi:10.1073/PNAS.0704285104
    • Proc. Natl. Acad. Sci. USA , vol.104 , Issue.38 , pp. 14970-14975
    • Teller, K.1    Solovei, I.2    Buiting, K.3    Horsthemke, B.4
  • 100
    • 1142281997 scopus 로고    scopus 로고
    • The radial positioning of chromatin is not inherited through mitosis but is established de novo in early G1
    • doi:10.1016/J.CUB.2003.12.024
    • Thomson, I., Gilchrist, S., Bickmore, W. A., and Chubb, J. R. (2004). The radial positioning of chromatin is not inherited through mitosis but is established de novo in early G1. Curr. Biol. 14(2), 166-172. doi:10.1016/J.CUB.2003.12.024
    • (2004) Curr. Biol. , vol.14 , Issue.2 , pp. 166-172
    • Thomson, I.1    Gilchrist, S.2    Bickmore, W.A.3    Chubb, J.R.4
  • 101
    • 44449114549 scopus 로고    scopus 로고
    • Nuclear functions in space and time: Gene expression in a dynamic, constrained environment
    • doi:10.1016/J.FEBSLET.2008.04.029
    • Trinkle-Mulcahy, L., and Lamond, A. I. (2008). Nuclear functions in space and time: gene expression in a dynamic, constrained environment. FEBS Lett. 582(14), 1960-1970. doi:10.1016/J.FEBSLET.2008.04.029
    • (2008) FEBS Lett. , vol.582 , Issue.14 , pp. 1960-1970
    • Trinkle-Mulcahy, L.1    Lamond, A.I.2
  • 102
    • 0034007256 scopus 로고    scopus 로고
    • Identification of in vivo DNA targets of chromatin proteins using tethered dam methyltransferase
    • doi:10.1038/74487
    • Van Steensel, B., and Henikoff, S. (2000). Identification of in vivo DNA targets of chromatin proteins using tethered dam methyltransferase. Nat. Biotechnol. 18(4), 424-428. doi:10.1038/74487
    • (2000) Nat. Biotechnol. , vol.18 , Issue.4 , pp. 424-428
    • Van Steensel, B.1    Henikoff, S.2
  • 103
    • 33644855266 scopus 로고    scopus 로고
    • Regulation of higher-order chromatin structures by nucleosome-remodelling factors
    • doi:10.1016/J.GDE.2006.02.006
    • Varga-Weisz, P. D., and Becker, P. B. (2006). Regulation of higher-order chromatin structures by nucleosome-remodelling factors. Curr. Opin. Genet. Dev. 16(2), 151-156. doi:10.1016/J.GDE.2006.02.006
    • (2006) Curr. Opin. Genet. Dev. , vol.16 , Issue.2 , pp. 151-156
    • Varga-Weisz, P.D.1    Becker, P.B.2
  • 104
    • 0037416135 scopus 로고    scopus 로고
    • Chromosome order in HeLa cells changes during mitosis and early G1, but is stably maintained during subsequent interphase stages
    • doi:10.1083/JCB.200211103
    • Walter, J., Schermelleh, L., Cremer, M., Tashiro, S., and Cremer, T. (2003). Chromosome order in HeLa cells changes during mitosis and early G1, but is stably maintained during subsequent interphase stages. J. Cell Biol. 160(5), 685-697. doi:10.1083/JCB.200211103
    • (2003) J. Cell Biol. , vol.160 , Issue.5 , pp. 685-697
    • Walter, J.1    Schermelleh, L.2    Cremer, M.3    Tashiro, S.4    Cremer, T.5
  • 105
    • 44149106396 scopus 로고    scopus 로고
    • Similar active genes cluster in specialized transcription factories
    • doi:10.1083/JCB. 200710053
    • Xu, M., and Cook, P. R. (2008). Similar active genes cluster in specialized transcription factories. J. Cell Biol. 181(4), 615-623. doi:10.1083/JCB. 200710053
    • (2008) J. Cell Biol. , vol.181 , Issue.4 , pp. 615-623
    • Xu, M.1    Cook, P.R.2
  • 106
    • 69249234735 scopus 로고    scopus 로고
    • A probabilistic model for the arrangement of a subset of human chromosome territories in WI38 human fibroblasts
    • doi:10.1002/JCP.21842
    • Zeitz, M. J., Mukherjee, L., Bhattacharya, S., Xu, J., and Berezney, R. (2009). A probabilistic model for the arrangement of a subset of human chromosome territories in WI38 human fibroblasts. J. Cell. Physiol. 221(1), 120-129. doi:10.1002/JCP.21842
    • (2009) J. Cell. Physiol. , vol.221 , Issue.1 , pp. 120-129
    • Zeitz, M.J.1    Mukherjee, L.2    Bhattacharya, S.3    Xu, J.4    Berezney, R.5
  • 107
    • 0034920314 scopus 로고    scopus 로고
    • Developmental potential of mouse embryos reconstructed from metaphase embryonic stem cell nuclei
    • Zhou, Q., Jouneau, A., Brochard, V., Adenot, P., and Renard, J. P. (2001). Developmental potential of mouse embryos reconstructed from metaphase embryonic stem cell nuclei. Biol. Reprod. 65(2), 412-419.
    • (2001) Biol. Reprod. , vol.65 , Issue.2 , pp. 412-419
    • Zhou, Q.1    Jouneau, A.2    Brochard, V.3    Adenot, P.4    Renard, J.P.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.