-
1
-
-
0016610491
-
Computer simulation of protein folding
-
Levitt M., and Warshel A. Computer simulation of protein folding. Nature 253 (1975) 694-698
-
(1975)
Nature
, vol.253
, pp. 694-698
-
-
Levitt, M.1
Warshel, A.2
-
2
-
-
0016696599
-
Studies on protein folding, unfolding and fluctuations by computer simulation. 1. The effect of specific amino acid sequence represented by specific inter-unit interactions
-
Taketomi H., Ueda Y., and Gō N. Studies on protein folding, unfolding and fluctuations by computer simulation. 1. The effect of specific amino acid sequence represented by specific inter-unit interactions. Int. J. Pept. Protein Res. 7 (1975) 445-459
-
(1975)
Int. J. Pept. Protein Res.
, vol.7
, pp. 445-459
-
-
Taketomi, H.1
Ueda, Y.2
Go, N.3
-
3
-
-
0028947257
-
Funnels, pathways, and the energy landscape of protein folding: a synthesis
-
Bryngelson J.D., Onuchic J.N., Socci N.D., and Wolynes P.G. Funnels, pathways, and the energy landscape of protein folding: a synthesis. Proteins Struct. Funct. Genet. 21 (1995) 167-195
-
(1995)
Proteins Struct. Funct. Genet.
, vol.21
, pp. 167-195
-
-
Bryngelson, J.D.1
Onuchic, J.N.2
Socci, N.D.3
Wolynes, P.G.4
-
4
-
-
0028929556
-
Principles of protein folding-a perspective from simple exact models
-
Dill K.A., Bromberg S., Yue K., Fiebig K.M., Yee D.P., Thomas P.D., and Chan H.S. Principles of protein folding-a perspective from simple exact models. Protein Sci. 4 (1995) 561-602
-
(1995)
Protein Sci.
, vol.4
, pp. 561-602
-
-
Dill, K.A.1
Bromberg, S.2
Yue, K.3
Fiebig, K.M.4
Yee, D.P.5
Thomas, P.D.6
Chan, H.S.7
-
5
-
-
0001103473
-
Kinetics of folding of proteins and RNA
-
Thirumalai D., and Woodson S.A. Kinetics of folding of proteins and RNA. Acc. Chem. Res. 29 (1996) 433-439
-
(1996)
Acc. Chem. Res.
, vol.29
, pp. 433-439
-
-
Thirumalai, D.1
Woodson, S.A.2
-
6
-
-
1842298212
-
From Levinthal to pathways to funnels
-
Dill K.A., and Chan H.S. From Levinthal to pathways to funnels. Nat. Struct. Biol. 4 (1997) 10-19
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 10-19
-
-
Dill, K.A.1
Chan, H.S.2
-
8
-
-
1542319916
-
Cooperativity principles in protein folding
-
Chan H.S., Shimizu S., and Kaya H. Cooperativity principles in protein folding. Methods Enzymol. 380 (2004) 350-379
-
(2004)
Methods Enzymol.
, vol.380
, pp. 350-379
-
-
Chan, H.S.1
Shimizu, S.2
Kaya, H.3
-
10
-
-
19444371858
-
A critical assessment of the topomer search model of protein folding using a continuum explicit-chain model with extensive conformational sampling
-
Wallin S., and Chan H.S. A critical assessment of the topomer search model of protein folding using a continuum explicit-chain model with extensive conformational sampling. Protein Sci. 14 (2005) 1643-1660
-
(2005)
Protein Sci.
, vol.14
, pp. 1643-1660
-
-
Wallin, S.1
Chan, H.S.2
-
11
-
-
33646931471
-
Protein folding thermodynamics and dynamics: where physics, chemistry, and biology meet
-
Shakhnovich E. Protein folding thermodynamics and dynamics: where physics, chemistry, and biology meet. Chem. Rev. 106 (2006) 1559-1588
-
(2006)
Chem. Rev.
, vol.106
, pp. 1559-1588
-
-
Shakhnovich, E.1
-
12
-
-
0032574811
-
The sequences of small proteins are not extensively optimized for rapid folding by natural selection
-
Kim D.E., Gu H., and Baker D. The sequences of small proteins are not extensively optimized for rapid folding by natural selection. Proc. Natl Acad. Sci. USA 95 (1998) 4982-4986
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 4982-4986
-
-
Kim, D.E.1
Gu, H.2
Baker, D.3
-
13
-
-
0036172116
-
Hydrophobic core packing in the SH3 domain folding transition state
-
Northey J.G.B., Di Nardo A.A., and Davidson A.R. Hydrophobic core packing in the SH3 domain folding transition state. Nat. Struct. Biol. 9 (2002) 126-130
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 126-130
-
-
Northey, J.G.B.1
Di Nardo, A.A.2
Davidson, A.R.3
-
14
-
-
0026345750
-
Folding of chymotrypsin inhibitor 2. 1. Evidence for a two-state transition
-
Jackson S.E., and Fersht A.R. Folding of chymotrypsin inhibitor 2. 1. Evidence for a two-state transition. Biochemistry 30 (1991) 10428-10435
-
(1991)
Biochemistry
, vol.30
, pp. 10428-10435
-
-
Jackson, S.E.1
Fersht, A.R.2
-
16
-
-
1842609484
-
Early collapse is not an obligate step in protein folding
-
Jacob J., Krantz B., Dothager R.S., Thiyagarajan P., and Sosnick T.R. Early collapse is not an obligate step in protein folding. J. Mol. Biol. 338 (2004) 369-382
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 369-382
-
-
Jacob, J.1
Krantz, B.2
Dothager, R.S.3
Thiyagarajan, P.4
Sosnick, T.R.5
-
17
-
-
0023358977
-
Mutant sequences as probes of protein folding mechanisms
-
Matthews C.R., and Hurle M.R. Mutant sequences as probes of protein folding mechanisms. BioEssays 6 (1987) 254-257
-
(1987)
BioEssays
, vol.6
, pp. 254-257
-
-
Matthews, C.R.1
Hurle, M.R.2
-
18
-
-
0024417964
-
The molten globule state as a clue for understanding the folding and cooperativity of globular protein structure
-
Kuwajima K. The molten globule state as a clue for understanding the folding and cooperativity of globular protein structure. Proteins: Struct. Funct. Genet. 6 (1989) 87-103
-
(1989)
Proteins: Struct. Funct. Genet.
, vol.6
, pp. 87-103
-
-
Kuwajima, K.1
-
19
-
-
0025345415
-
Intermediates in the folding reactions of small proteins
-
Kim P.S., and Baldwin R.L. Intermediates in the folding reactions of small proteins. Annu. Rev. Biochem. 59 (1990) 631-660
-
(1990)
Annu. Rev. Biochem.
, vol.59
, pp. 631-660
-
-
Kim, P.S.1
Baldwin, R.L.2
-
20
-
-
0027313673
-
Pathways of protein folding
-
Matthews C.R. Pathways of protein folding. Annu. Rev. Biochem. 62 (1993) 653-683
-
(1993)
Annu. Rev. Biochem.
, vol.62
, pp. 653-683
-
-
Matthews, C.R.1
-
21
-
-
33746102627
-
Atom-by-atom analysis of global downhill protein folding
-
Sadqi M., Fushman D., and Muñoz V. Atom-by-atom analysis of global downhill protein folding. Nature 442 (2006) 317-321
-
(2006)
Nature
, vol.442
, pp. 317-321
-
-
Sadqi, M.1
Fushman, D.2
Muñoz, V.3
-
22
-
-
34250161638
-
6-85 towards downhill folding at its melting temperature
-
6-85 towards downhill folding at its melting temperature. J. Mol. Biol. 370 (2007) 574-584
-
(2007)
J. Mol. Biol.
, vol.370
, pp. 574-584
-
-
Liu, F.1
Gruebele, M.2
-
23
-
-
0031815749
-
How do small single-domain proteins fold?
-
Jackson S.E. How do small single-domain proteins fold?. Folding Des. 3 (1998) R81-R91
-
(1998)
Folding Des.
, vol.3
-
-
Jackson, S.E.1
-
24
-
-
0034604105
-
A surprising simplicity to protein folding
-
Baker D. A surprising simplicity to protein folding. Nature 405 (2000) 39-42
-
(2000)
Nature
, vol.405
, pp. 39-42
-
-
Baker, D.1
-
25
-
-
62449160383
-
What have we learned from the studies of two-state folders, and what are the unanswered questions about two-state protein folding?
-
Barrick D. What have we learned from the studies of two-state folders, and what are the unanswered questions about two-state protein folding?. Phys. Biol. 6 (2009) 015001
-
(2009)
Phys. Biol.
, vol.6
, pp. 015001
-
-
Barrick, D.1
-
26
-
-
0032502839
-
Contact order, transition state placement and the refolding rates of single domain proteins
-
Plaxco K.W., Simons K.T., and Baker D. Contact order, transition state placement and the refolding rates of single domain proteins. J. Mol. Biol. 227 (1998) 985-994
-
(1998)
J. Mol. Biol.
, vol.227
, pp. 985-994
-
-
Plaxco, K.W.1
Simons, K.T.2
Baker, D.3
-
27
-
-
33645294148
-
Conformational entropic barriers in topology-dependent protein folding: perspectives from a simple native-centric polymer model
-
Wallin S., and Chan H.S. Conformational entropic barriers in topology-dependent protein folding: perspectives from a simple native-centric polymer model. J. Phys.: Condens. Matter 18 (2006) S307-S328
-
(2006)
J. Phys.: Condens. Matter
, vol.18
-
-
Wallin, S.1
Chan, H.S.2
-
28
-
-
0032559928
-
Matching speed and locality
-
Chan H.S. Matching speed and locality. Nature 392 (1998) 761-763
-
(1998)
Nature
, vol.392
, pp. 761-763
-
-
Chan, H.S.1
-
29
-
-
0000355428
-
Respective roles of short- and long-range interactions in protein folding
-
Gō N., and Taketomi H. Respective roles of short- and long-range interactions in protein folding. Proc. Natl Acad. Sci. USA 75 (1978) 559-563
-
(1978)
Proc. Natl Acad. Sci. USA
, vol.75
, pp. 559-563
-
-
Go, N.1
Taketomi, H.2
-
30
-
-
0033613255
-
Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures
-
Alm E., and Baker D. Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures. Proc. Natl Acad. Sci. USA 96 (1999) 11305-11310
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 11305-11310
-
-
Alm, E.1
Baker, D.2
-
31
-
-
0033613165
-
A simple model for calculating the kinetics of protein folding from three-dimensional structures
-
Muñoz V., and Eaton W.A. A simple model for calculating the kinetics of protein folding from three-dimensional structures. Proc. Natl Acad. Sci. USA 96 (1999) 11311-11316
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 11311-11316
-
-
Muñoz, V.1
Eaton, W.A.2
-
32
-
-
0034284366
-
Modeling protein density of states: additive hydrophobic effects are insufficient for calorimetric two-state cooperativity
-
Chan H.S. Modeling protein density of states: additive hydrophobic effects are insufficient for calorimetric two-state cooperativity. Proteins: Struct. Funct. Genet. 40 (2000) 543-571
-
(2000)
Proteins: Struct. Funct. Genet.
, vol.40
, pp. 543-571
-
-
Chan, H.S.1
-
33
-
-
0242330738
-
The importance of explicit chain representation in protein folding models: an examination of Ising-like models
-
Karanicolas J., and Brooks C.L. The importance of explicit chain representation in protein folding models: an examination of Ising-like models. Proteins: Struct. Funct. Genet. 53 (2003) 740-747
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.53
, pp. 740-747
-
-
Karanicolas, J.1
Brooks, C.L.2
-
34
-
-
18344391877
-
Protein structures and optimal folding from a geometrical variational principle
-
Micheletti C., Banavar J.R., Maritan A., and Seno F. Protein structures and optimal folding from a geometrical variational principle. Phys. Rev. Lett. 82 (1999) 3372-3375
-
(1999)
Phys. Rev. Lett.
, vol.82
, pp. 3372-3375
-
-
Micheletti, C.1
Banavar, J.R.2
Maritan, A.3
Seno, F.4
-
35
-
-
0033607208
-
Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A
-
Shea J.-E., Onuchic J.N., and Brooks C.L. Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A. Proc. Natl Acad. Sci. USA 96 (1999) 12512-12517
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 12512-12517
-
-
Shea, J.-E.1
Onuchic, J.N.2
Brooks, C.L.3
-
36
-
-
0034685604
-
Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins
-
Clementi C., Nymeyer H., and Onuchic J.N. Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins. J. Mol. Biol. 298 (2000) 937-953
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 937-953
-
-
Clementi, C.1
Nymeyer, H.2
Onuchic, J.N.3
-
37
-
-
0035850732
-
Roles of native topology and chain-length scaling in protein folding: a simulation study with a Gō-like model
-
Koga N., and Takada S. Roles of native topology and chain-length scaling in protein folding: a simulation study with a Gō-like model. J. Mol. Biol. 313 (2001) 171-180
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 171-180
-
-
Koga, N.1
Takada, S.2
-
38
-
-
0037423710
-
Cooperativity, smooth energy landscapes and the origins of topology-dependent protein folding rates
-
Jewett A.I., Pande V.S., and Plaxco K.W. Cooperativity, smooth energy landscapes and the origins of topology-dependent protein folding rates. J. Mol. Biol. 326 (2003) 247-253
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 247-253
-
-
Jewett, A.I.1
Pande, V.S.2
Plaxco, K.W.3
-
39
-
-
0042631521
-
Contact order dependent protein folding rates: kinetic consequences of a cooperative interplay between favorable nonlocal interactions and local conformations preferences
-
Kaya H., and Chan H.S. Contact order dependent protein folding rates: kinetic consequences of a cooperative interplay between favorable nonlocal interactions and local conformations preferences. Proteins: Struct. Funct. Genet. 52 (2003) 524-533
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.52
, pp. 524-533
-
-
Kaya, H.1
Chan, H.S.2
-
40
-
-
0034284060
-
Polymer principles of protein calorimetric two-state cooperativity
-
[Erratum: 43, 523 (2001)]
-
Kaya H., and Chan H.S. Polymer principles of protein calorimetric two-state cooperativity. Proteins: Struct. Funct. Genet. 40 (2000) 637-661 [Erratum: 43, 523 (2001)]
-
(2000)
Proteins: Struct. Funct. Genet.
, vol.40
, pp. 637-661
-
-
Kaya, H.1
Chan, H.S.2
-
41
-
-
0037459035
-
Solvation effects and driving forces for protein thermodynamic and kinetic cooperativity: how adequate is native-centric topological modeling?
-
[Corrigendum: 337, 1069-1070 (2004)]
-
Kaya H., and Chan H.S. Solvation effects and driving forces for protein thermodynamic and kinetic cooperativity: how adequate is native-centric topological modeling?. J. Mol. Biol. 326 (2003) 911-931 [Corrigendum: 337, 1069-1070 (2004)]
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 911-931
-
-
Kaya, H.1
Chan, H.S.2
-
42
-
-
67749106309
-
Theory for protein folding cooperativity: helix bundles
-
Ghosh K., and Dill K.A. Theory for protein folding cooperativity: helix bundles. J. Am. Chem. Soc. 131 (2009) 2306-2312
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 2306-2312
-
-
Ghosh, K.1
Dill, K.A.2
-
43
-
-
10844267966
-
Explicit-chain model of native-state hydrogen exchange: implications for event ordering and cooperativity in protein folding
-
Kaya H., and Chan H.S. Explicit-chain model of native-state hydrogen exchange: implications for event ordering and cooperativity in protein folding. Proteins: Struct. Funct. Bioinf. 58 (2005) 31-44
-
(2005)
Proteins: Struct. Funct. Bioinf.
, vol.58
, pp. 31-44
-
-
Kaya, H.1
Chan, H.S.2
-
44
-
-
4644259872
-
Three-body interactions improve the prediction of rate and mechanism in protein folding models
-
Ejtehadi M.R., Avall S.P., and Plotkin S.S. Three-body interactions improve the prediction of rate and mechanism in protein folding models. Proc. Natl Acad. Sci. USA 101 (2004) 15088-15093
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 15088-15093
-
-
Ejtehadi, M.R.1
Avall, S.P.2
Plotkin, S.S.3
-
45
-
-
24344449144
-
The cooperative nature of hydrophobic forces and protein folding kinetics
-
Wang J., Lee C., and Stell G. The cooperative nature of hydrophobic forces and protein folding kinetics. Chem. Phys. 316 (2005) 53-60
-
(2005)
Chem. Phys.
, vol.316
, pp. 53-60
-
-
Wang, J.1
Lee, C.2
Stell, G.3
-
46
-
-
34547466590
-
Excluded volume, local structural cooperativity, and the polymer physics of protein folding rates
-
Qi X., and Portman J.J. Excluded volume, local structural cooperativity, and the polymer physics of protein folding rates. Proc. Natl Acad. Sci. USA 104 (2007) 10841-10846
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 10841-10846
-
-
Qi, X.1
Portman, J.J.2
-
47
-
-
0029155772
-
Impact of local and nonlocal interactions on thermodynamics and kinetics of protein folding
-
Abkevich V.I., Gutin A.M., and Shakhnovich E.I. Impact of local and nonlocal interactions on thermodynamics and kinetics of protein folding. J. Mol. Biol. 252 (1995) 460-471
-
(1995)
J. Mol. Biol.
, vol.252
, pp. 460-471
-
-
Abkevich, V.I.1
Gutin, A.M.2
Shakhnovich, E.I.3
-
48
-
-
0032725441
-
Folding alphabets
-
Chan H.S. Folding alphabets. Nat. Struct. Biol. 6 (1999) 994-996
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 994-996
-
-
Chan, H.S.1
-
49
-
-
0002134029
-
Computational methods for protein folding: scaling a hierarchy of complexities
-
Jiang T., Xu Y., and Zhang M.Q. (Eds), The MIT Press, Cambridge, MA chapt. 16
-
Chan H.S., Kaya H., and Shimizu S. Computational methods for protein folding: scaling a hierarchy of complexities. In: Jiang T., Xu Y., and Zhang M.Q. (Eds). Current Topics in Computational Molecular Biology (2002), The MIT Press, Cambridge, MA 403-447 chapt. 16
-
(2002)
Current Topics in Computational Molecular Biology
, pp. 403-447
-
-
Chan, H.S.1
Kaya, H.2
Shimizu, S.3
-
50
-
-
0042093787
-
Origins of chevron rollovers in non-two-state protein folding kinetics
-
Kaya H., and Chan H.S. Origins of chevron rollovers in non-two-state protein folding kinetics. Phys. Rev. Lett. 90 (2003) 258104
-
(2003)
Phys. Rev. Lett.
, vol.90
, pp. 258104
-
-
Kaya, H.1
Chan, H.S.2
-
51
-
-
0037612553
-
Temperature dependence of the distribution of the first passage time: results from discontinuous molecular dynamics simulations of an all-atom model of the second β-hairpin fragment of protein G
-
Zhou Y., Zhang C., Stell G., and Wang J. Temperature dependence of the distribution of the first passage time: results from discontinuous molecular dynamics simulations of an all-atom model of the second β-hairpin fragment of protein G. J. Am. Chem. Soc. 125 (2003) 6300-6305
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 6300-6305
-
-
Zhou, Y.1
Zhang, C.2
Stell, G.3
Wang, J.4
-
52
-
-
54949099933
-
Probing possible downhill folding: native contact topology likely places a significant constraint on the folding cooperativity of proteins with ∼40 residues
-
Badasyan A., Liu Z., and Chan H.S. Probing possible downhill folding: native contact topology likely places a significant constraint on the folding cooperativity of proteins with ∼40 residues. J. Mol. Biol. 384 (2008) 512-530
-
(2008)
J. Mol. Biol.
, vol.384
, pp. 512-530
-
-
Badasyan, A.1
Liu, Z.2
Chan, H.S.3
-
53
-
-
0031052147
-
A desolvation barrier to hydrophobic cluster formation may contribute to the rate-limiting step in protein folding
-
Rank J.A., and Baker D. A desolvation barrier to hydrophobic cluster formation may contribute to the rate-limiting step in protein folding. Protein Sci. 6 (1997) 347-354
-
(1997)
Protein Sci.
, vol.6
, pp. 347-354
-
-
Rank, J.A.1
Baker, D.2
-
54
-
-
0037154268
-
Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapse
-
Cheung M.S., García A.E., and Onuchic J.N. Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapse. Proc. Natl Acad. Sci. USA 99 (2002) 685-690
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 685-690
-
-
Cheung, M.S.1
García, A.E.2
Onuchic, J.N.3
-
55
-
-
0036785556
-
The origins of asymmetry in the folding transition states of protein L and protein G
-
Karanicolas J., and Brooks C.L. The origins of asymmetry in the folding transition states of protein L and protein G. Protein Sci. 11 (2002) 2351-2361
-
(2002)
Protein Sci.
, vol.11
, pp. 2351-2361
-
-
Karanicolas, J.1
Brooks, C.L.2
-
56
-
-
5444256313
-
Water as a conformational editor in protein folding
-
Sessions R.B., Thomas G.L., and Parker M.J. Water as a conformational editor in protein folding. J. Mol. Biol. 343 (2004) 1125-1133
-
(2004)
J. Mol. Biol.
, vol.343
, pp. 1125-1133
-
-
Sessions, R.B.1
Thomas, G.L.2
Parker, M.J.3
-
57
-
-
19444381093
-
Chevron behavior and isostable enthalpic barriers in protein folding: successes and limitations of simple Gō-like modeling
-
Kaya H., Liu Z., and Chan H.S. Chevron behavior and isostable enthalpic barriers in protein folding: successes and limitations of simple Gō-like modeling. Biophys. J. 89 (2005) 520-535
-
(2005)
Biophys. J.
, vol.89
, pp. 520-535
-
-
Kaya, H.1
Liu, Z.2
Chan, H.S.3
-
58
-
-
19444384541
-
Desolvation is a likely origin of robust enthalpic barriers to protein folding
-
Liu Z., and Chan H.S. Desolvation is a likely origin of robust enthalpic barriers to protein folding. J. Mol. Biol. 349 (2005) 872-889
-
(2005)
J. Mol. Biol.
, vol.349
, pp. 872-889
-
-
Liu, Z.1
Chan, H.S.2
-
59
-
-
27744500841
-
Solvation and desolvation effects in protein folding: native flexibility, kinetic cooperativity, and enthalpic barriers under isostability conditions
-
Liu Z., and Chan H.S. Solvation and desolvation effects in protein folding: native flexibility, kinetic cooperativity, and enthalpic barriers under isostability conditions. Phys. Biol. 2 (2005) S75-S85
-
(2005)
Phys. Biol.
, vol.2
-
-
Liu, Z.1
Chan, H.S.2
-
60
-
-
65649134590
-
-
Ferguson, A., Liu, Z. & Chan, H. S. (2007). Desolvation effects and topology-dependent protein folding. 2007 American Physical Society March Meeting Abstract BAPS.2007.MAR.D26.3. http://meetings.aps.org/link/BAPS.2007.MAR.D26.3.
-
Ferguson, A., Liu, Z. & Chan, H. S. (2007). Desolvation effects and topology-dependent protein folding. 2007 American Physical Society March Meeting Abstract BAPS.2007.MAR.D26.3. http://meetings.aps.org/link/BAPS.2007.MAR.D26.3.
-
-
-
-
61
-
-
0036183221
-
Im7 folding mechanism: misfolding on a path to the native state
-
Capaldi A.P., Kleanthous C., and Radford S.E. Im7 folding mechanism: misfolding on a path to the native state. Nat. Struct. Biol. 9 (2002) 209-216
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 209-216
-
-
Capaldi, A.P.1
Kleanthous, C.2
Radford, S.E.3
-
62
-
-
0037117477
-
Unspecific hydrophobic stabilization of folding transition states
-
Viguera A.R., Vega C., and Serrano L. Unspecific hydrophobic stabilization of folding transition states. Proc. Natl Acad. Sci. USA 99 (2002) 5349-5354
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 5349-5354
-
-
Viguera, A.R.1
Vega, C.2
Serrano, L.3
-
63
-
-
0242318402
-
Specific non-native hydrophobic interactions in a hidden folding intermediate: implications for protein folding
-
Feng H., Takei J., Lipsitz R., Tjandra N., and Bai Y. Specific non-native hydrophobic interactions in a hidden folding intermediate: implications for protein folding. Biochemistry 42 (2003) 12461-12465
-
(2003)
Biochemistry
, vol.42
, pp. 12461-12465
-
-
Feng, H.1
Takei, J.2
Lipsitz, R.3
Tjandra, N.4
Bai, Y.5
-
64
-
-
1942521649
-
Thermodynamics and kinetics of non-native interactions in protein folding: a single point mutant significantly stabilizes the N-terminal domain of L9 by modulating non-native interactions in the denatured state
-
Cho J.H., Sato S., and Raleigh D.P. Thermodynamics and kinetics of non-native interactions in protein folding: a single point mutant significantly stabilizes the N-terminal domain of L9 by modulating non-native interactions in the denatured state. J. Mol. Biol. 338 (2004) 827-837
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 827-837
-
-
Cho, J.H.1
Sato, S.2
Raleigh, D.P.3
-
65
-
-
35548965931
-
Structural analysis of kinetic folding intermediates for a TIM barrel protein, indole-3-glycerol phosphate synthase, by hydrogen exchange mass spectrometry and Gō model simulation
-
Gu Z., Rao M.K., Forsyth W.R., Finke J.M., and Matthews C.R. Structural analysis of kinetic folding intermediates for a TIM barrel protein, indole-3-glycerol phosphate synthase, by hydrogen exchange mass spectrometry and Gō model simulation. J. Mol. Biol. 374 (2007) 528-546
-
(2007)
J. Mol. Biol.
, vol.374
, pp. 528-546
-
-
Gu, Z.1
Rao, M.K.2
Forsyth, W.R.3
Finke, J.M.4
Matthews, C.R.5
-
66
-
-
48249138078
-
Theoretical and experimental demonstration of the importance of specific nonnative interactions in protein folding
-
Zarrine-Afsar A., Wallin S., Neculai A.M., Neudecker P., Howell P.L., Davidson A.R., and Chan H.S. Theoretical and experimental demonstration of the importance of specific nonnative interactions in protein folding. Proc. Natl Acad. Sci. USA 105 (2008) 9999-10004
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 9999-10004
-
-
Zarrine-Afsar, A.1
Wallin, S.2
Neculai, A.M.3
Neudecker, P.4
Howell, P.L.5
Davidson, A.R.6
Chan, H.S.7
-
67
-
-
61549141060
-
Native topology of the designed protein Top7 is not conducive to cooperative folding
-
Zhang Z., and Chan H.S. Native topology of the designed protein Top7 is not conducive to cooperative folding. Biophys. J. 96 (2009) L25-L27
-
(2009)
Biophys. J.
, vol.96
-
-
Zhang, Z.1
Chan, H.S.2
-
68
-
-
65649143356
-
Liaison amid disorder: non-native interactions may underpin long-range coupling in proteins
-
Chan H.S., and Zhang Z. Liaison amid disorder: non-native interactions may underpin long-range coupling in proteins. J. Biol. 8 (2009) 27
-
(2009)
J. Biol.
, vol.8
, pp. 27
-
-
Chan, H.S.1
Zhang, Z.2
-
69
-
-
0032539561
-
Molecular picture of folding of a small α/β protein
-
Sheinerman F.B., and Brooks C.L. Molecular picture of folding of a small α/β protein. Proc. Natl Acad. Sci. USA 95 (1998) 1562-1567
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 1562-1567
-
-
Sheinerman, F.B.1
Brooks, C.L.2
-
70
-
-
2342448436
-
Simulations of the role of water in the protein-folding mechanism
-
Rhee Y.M., Sorin E.J., Jayachandran G., Lindahl E., and Pande V.S. Simulations of the role of water in the protein-folding mechanism. Proc. Natl Acad. Sci. USA 101 (2004) 6456-6461
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 6456-6461
-
-
Rhee, Y.M.1
Sorin, E.J.2
Jayachandran, G.3
Lindahl, E.4
Pande, V.S.5
-
71
-
-
0036643497
-
Anti-cooperativity and cooperativity in hydrophobic interactions: three-body free energy landscapes and comparison with implicit-solvent potential functions for proteins
-
[Erratum: 49, 294 (2002)]
-
Shimizu S., and Chan H.S. Anti-cooperativity and cooperativity in hydrophobic interactions: three-body free energy landscapes and comparison with implicit-solvent potential functions for proteins. Proteins: Struct. Funct. Genet. 48 (2002) 15-30 [Erratum: 49, 294 (2002)]
-
(2002)
Proteins: Struct. Funct. Genet.
, vol.48
, pp. 15-30
-
-
Shimizu, S.1
Chan, H.S.2
-
72
-
-
0036891682
-
Origins of protein denatured state compactness and hydrophobic clustering in aqueous urea: inferences from nonpolar potentials of mean force
-
Shimizu S., and Chan H.S. Origins of protein denatured state compactness and hydrophobic clustering in aqueous urea: inferences from nonpolar potentials of mean force. Proteins Struct. Funct. Genet. 49 (2002) 560-566
-
(2002)
Proteins Struct. Funct. Genet.
, vol.49
, pp. 560-566
-
-
Shimizu, S.1
Chan, H.S.2
-
73
-
-
11844285690
-
Temperature dependence of three-body hydrophobic interactions: potential of mean force, enthalpy, entropy, heat capacity, and nonadditivity
-
[Correction: 127, 2363 (2005)]
-
Moghaddam M.S., Shimizu S., and Chan H.S. Temperature dependence of three-body hydrophobic interactions: potential of mean force, enthalpy, entropy, heat capacity, and nonadditivity. J. Am. Chem. Soc. 127 (2005) 303-316 [Correction: 127, 2363 (2005)]
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 303-316
-
-
Moghaddam, M.S.1
Shimizu, S.2
Chan, H.S.3
-
74
-
-
33745032291
-
Water mediation in protein folding and molecular recognition
-
Levy Y., and Onuchic J.N. Water mediation in protein folding and molecular recognition. Annu. Rev. Biophys. Biomol. Struct. 35 (2006) 389-415
-
(2006)
Annu. Rev. Biophys. Biomol. Struct.
, vol.35
, pp. 389-415
-
-
Levy, Y.1
Onuchic, J.N.2
-
75
-
-
41149129250
-
Protein folding kinetics under force from molecular simulation
-
Best R.B., and Hummer G. Protein folding kinetics under force from molecular simulation. J. Am. Chem. Soc. 130 (2008) 3706-3707
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 3706-3707
-
-
Best, R.B.1
Hummer, G.2
-
77
-
-
58149129069
-
Between-species variation in the kinetic stability of TIM proteins linked to solvation-barrier free energies
-
Costas M., Rodríguez-Larrea D., De Maria L., Borchert T.V., Gómez-Puyou A., and Sanchez-Ruiz J.M. Between-species variation in the kinetic stability of TIM proteins linked to solvation-barrier free energies. J. Mol. Biol. 385 (2009) 924-937
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 924-937
-
-
Costas, M.1
Rodríguez-Larrea, D.2
De Maria, L.3
Borchert, T.V.4
Gómez-Puyou, A.5
Sanchez-Ruiz, J.M.6
-
78
-
-
34547516861
-
Hydrophobic association of α-helices, steric dewetting and enthalpic barriers to protein folding
-
[Correction: 105, 19561 (2008)]
-
MacCallum J.L., Sabaye Moghaddam M., Chan H.S., and Tieleman D.P. Hydrophobic association of α-helices, steric dewetting and enthalpic barriers to protein folding. Proc. Natl. Acad. Sci. USA 104 (2007) 6206-6210 [Correction: 105, 19561 (2008)]
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 6206-6210
-
-
MacCallum, J.L.1
Sabaye Moghaddam, M.2
Chan, H.S.3
Tieleman, D.P.4
-
79
-
-
36749120002
-
Theory of hydrophobic effect
-
Pratt L.R., and Chandler D. Theory of hydrophobic effect. J. Chem. Phys. 67 (1977) 3683-3704
-
(1977)
J. Chem. Phys.
, vol.67
, pp. 3683-3704
-
-
Pratt, L.R.1
Chandler, D.2
-
80
-
-
0034272188
-
Temperature dependence of hydrophobic interactions: a mean force perspective, effects of water density, and nonadditivity of thermodynamic signatures
-
[Erratum: 116, 8636 (2002)]
-
Shimizu S., and Chan H.S. Temperature dependence of hydrophobic interactions: a mean force perspective, effects of water density, and nonadditivity of thermodynamic signatures. J. Chem. Phys. 113 (2000) 4683-4700 [Erratum: 116, 8636 (2002)]
-
(2000)
J. Chem. Phys.
, vol.113
, pp. 4683-4700
-
-
Shimizu, S.1
Chan, H.S.2
-
81
-
-
0024977347
-
Low-temperature unfolding of a mutant of phage-T4 lysozyme. 2. Kinetic investigations
-
Chen B.-L., Baase W.A., and Schellman J.A. Low-temperature unfolding of a mutant of phage-T4 lysozyme. 2. Kinetic investigations. Biochemistry 28 (1989) 691-699
-
(1989)
Biochemistry
, vol.28
, pp. 691-699
-
-
Chen, B.-L.1
Baase, W.A.2
Schellman, J.A.3
-
82
-
-
0028981210
-
Negative activation enthalpies in the kinetics of protein folding
-
Oliveberg M., Tan Y.-J., and Fersht A.R. Negative activation enthalpies in the kinetics of protein folding. Proc. Natl Acad. Sci. USA 92 (1995) 8926-8929
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 8926-8929
-
-
Oliveberg, M.1
Tan, Y.-J.2
Fersht, A.R.3
-
83
-
-
0030984109
-
Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability
-
Scalley M.L., and Baker D. Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability. Proc. Natl Acad. Sci. USA 94 (1997) 10636-10640
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 10636-10640
-
-
Scalley, M.L.1
Baker, D.2
-
86
-
-
0030624384
-
Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties
-
Veitshans T., Klimov D., and Thirumalai D. Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties. Folding Des. 2 (1997) 1-22
-
(1997)
Folding Des.
, vol.2
, pp. 1-22
-
-
Veitshans, T.1
Klimov, D.2
Thirumalai, D.3
-
87
-
-
0000152754
-
A guide to Monte Carlo for statistical mechanics: 2. Byways
-
Berne B.J. (Ed), Plenum Press, New York chapt. 5
-
Valleau J.P., and Torrie G.M. A guide to Monte Carlo for statistical mechanics: 2. Byways. In: Berne B.J. (Ed). Statistical Mechanics, Part A: Equilibrium Techniques (1977), Plenum Press, New York 169-194 chapt. 5
-
(1977)
Statistical Mechanics, Part A: Equilibrium Techniques
, pp. 169-194
-
-
Valleau, J.P.1
Torrie, G.M.2
-
88
-
-
0024578173
-
Free-energy via molecular simulation - Applications to chemical and biomolecular system
-
Beveridge D.L., and DiCapua F.M. Free-energy via molecular simulation - Applications to chemical and biomolecular system. Annu. Rev. Biophys. Biophys. Chem. 18 (1989) 431-492
-
(1989)
Annu. Rev. Biophys. Biophys. Chem.
, vol.18
, pp. 431-492
-
-
Beveridge, D.L.1
DiCapua, F.M.2
-
89
-
-
0031144465
-
Hyperdynamics: accelerated molecular dynamics of infrequent events
-
Voter A.F. Hyperdynamics: accelerated molecular dynamics of infrequent events. Phys. Rev. Lett. 78 (1997) 3908-3911
-
(1997)
Phys. Rev. Lett.
, vol.78
, pp. 3908-3911
-
-
Voter, A.F.1
-
90
-
-
0026511656
-
The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding
-
Fersht A.R., Matouschek A., and Serrano L. The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding. J. Mol. Biol. 224 (1992) 771-782
-
(1992)
J. Mol. Biol.
, vol.224
, pp. 771-782
-
-
Fersht, A.R.1
Matouschek, A.2
Serrano, L.3
-
91
-
-
0034581629
-
Barriers in protein folding reactions
-
Bilsel O., and Matthews C.R. Barriers in protein folding reactions. Adv. Protein Chem. 53 (2000) 153-207
-
(2000)
Adv. Protein Chem.
, vol.53
, pp. 153-207
-
-
Bilsel, O.1
Matthews, C.R.2
-
92
-
-
0003166498
-
Protein folding in the landscape perspective: chevron plots and non-Arrhenius kinetics
-
Chan H.S., and Dill K.A. Protein folding in the landscape perspective: chevron plots and non-Arrhenius kinetics. Proteins: Struct. Funct. Genet. 30 (1998) 2-33
-
(1998)
Proteins: Struct. Funct. Genet.
, vol.30
, pp. 2-33
-
-
Chan, H.S.1
Dill, K.A.2
-
93
-
-
0035868526
-
Microscopic theory of protein folding rates. II. Local reaction coordinates and chain dynamics
-
Portman J.J., Takada S., and Wolynes P.G. Microscopic theory of protein folding rates. II. Local reaction coordinates and chain dynamics. J. Chem. Phys. 114 (2001) 5082-5096
-
(2001)
J. Chem. Phys.
, vol.114
, pp. 5082-5096
-
-
Portman, J.J.1
Takada, S.2
Wolynes, P.G.3
-
94
-
-
0036304480
-
Towards a consistent modeling of protein thermodynamic and kinetic cooperativity: how applicable is the transition state picture to folding and unfolding?
-
Kaya H., and Chan H.S. Towards a consistent modeling of protein thermodynamic and kinetic cooperativity: how applicable is the transition state picture to folding and unfolding?. J. Mol. Biol. 315 (2002) 899-909
-
(2002)
J. Mol. Biol.
, vol.315
, pp. 899-909
-
-
Kaya, H.1
Chan, H.S.2
-
96
-
-
33744952224
-
Diffusive model of protein folding dynamics with Kramers turnover in rate
-
Best R.B., and Hummer G. Diffusive model of protein folding dynamics with Kramers turnover in rate. Phys. Rev. Lett. 96 (2006) 228104
-
(2006)
Phys. Rev. Lett.
, vol.96
, pp. 228104
-
-
Best, R.B.1
Hummer, G.2
-
97
-
-
35548963462
-
Configuration-dependent diffusion can shift the kinetic transition state and barrier height of protein folding
-
Chahine J., Oliveira R.J., Leite V.B.P., and Wang J. Configuration-dependent diffusion can shift the kinetic transition state and barrier height of protein folding. Proc. Natl Acad. Sci. USA 104 (2007) 14646-14651
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 14646-14651
-
-
Chahine, J.1
Oliveira, R.J.2
Leite, V.B.P.3
Wang, J.4
-
98
-
-
0345583701
-
Protein folding as a diffusional process
-
Jacob M., and Schmid F.X. Protein folding as a diffusional process. Biochemistry 38 (1999) 13773-13779
-
(1999)
Biochemistry
, vol.38
, pp. 13773-13779
-
-
Jacob, M.1
Schmid, F.X.2
-
99
-
-
0042130544
-
Simple two-state protein folding kinetics requires near-Levinthal thermodynamic cooperativity
-
Kaya H., and Chan H.S. Simple two-state protein folding kinetics requires near-Levinthal thermodynamic cooperativity. Proteins: Struct. Funct. Genet. 52 (2003) 510-523
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.52
, pp. 510-523
-
-
Kaya, H.1
Chan, H.S.2
-
100
-
-
3142782241
-
Quantifying the roughness on the free energy landscape: entropic bottlenecks and protein folding rates
-
Chavez L.L., Onuchic J.N., and Clementi C. Quantifying the roughness on the free energy landscape: entropic bottlenecks and protein folding rates. J. Am. Chem. Soc. 126 (2004) 8426-8432
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 8426-8432
-
-
Chavez, L.L.1
Onuchic, J.N.2
Clementi, C.3
-
101
-
-
5244245983
-
A correlation of reaction rates
-
Hammond G.S. A correlation of reaction rates. J. Am. Chem. Soc. 77 (1955) 334-338
-
(1955)
J. Am. Chem. Soc.
, vol.77
, pp. 334-338
-
-
Hammond, G.S.1
-
102
-
-
0037155413
-
Structural and energetic heterogeneity in protein folding. I. Theory
-
Plotkin S.S., and Onuchic J.N. Structural and energetic heterogeneity in protein folding. I. Theory. J. Chem. Phys. 116 (2002) 5263-5283
-
(2002)
J. Chem. Phys.
, vol.116
, pp. 5263-5283
-
-
Plotkin, S.S.1
Onuchic, J.N.2
-
103
-
-
1942473645
-
Critical nucleation size in the folding of small apparently two-state proteins
-
Bai Y., Zhou H., and Zhou Y. Critical nucleation size in the folding of small apparently two-state proteins. Protein Sci. 13 (2004) 1173-1181
-
(2004)
Protein Sci.
, vol.13
, pp. 1173-1181
-
-
Bai, Y.1
Zhou, H.2
Zhou, Y.3
-
104
-
-
36749066113
-
Loop-closure principles in protein folding
-
Weikl T.R. Loop-closure principles in protein folding. Arch. Biochem. Biophys. 469 (2008) 67-75
-
(2008)
Arch. Biochem. Biophys.
, vol.469
, pp. 67-75
-
-
Weikl, T.R.1
-
105
-
-
0035967862
-
Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction
-
Gromiha M.M., and Selvaraj S. Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction. J. Mol. Biol. 310 (2001) 27-32
-
(2001)
J. Mol. Biol.
, vol.310
, pp. 27-32
-
-
Gromiha, M.M.1
Selvaraj, S.2
-
106
-
-
0036215854
-
Folding rate prediction using total contact distance
-
Zhou H., and Zhou Y. Folding rate prediction using total contact distance. Biophys. J. 82 (2002) 458-463
-
(2002)
Biophys. J.
, vol.82
, pp. 458-463
-
-
Zhou, H.1
Zhou, Y.2
-
107
-
-
0042510944
-
Contact order revisited: influence of protein size on the folding rate
-
Ivankov D.N., Garbuzynskiy S.O., Alm E., Plaxco K.W., Baker D., and Finkelstein A.V. Contact order revisited: influence of protein size on the folding rate. Protein Sci. 12 (2003) 2057-2062
-
(2003)
Protein Sci.
, vol.12
, pp. 2057-2062
-
-
Ivankov, D.N.1
Garbuzynskiy, S.O.2
Alm, E.3
Plaxco, K.W.4
Baker, D.5
Finkelstein, A.V.6
-
108
-
-
0037375366
-
Prediction of folding rates and transition-state placement from native-state geometry
-
Micheletti C. Prediction of folding rates and transition-state placement from native-state geometry. Proteins Struct. Funct. Genet. 51 (2003) 74-84
-
(2003)
Proteins Struct. Funct. Genet.
, vol.51
, pp. 74-84
-
-
Micheletti, C.1
-
109
-
-
0037432567
-
Local secondary structure content predicts folding rates for simple, two-state proteins
-
Gong H., Isom D.G., Srinivasan R., and Rose G.D. Local secondary structure content predicts folding rates for simple, two-state proteins. J. Mol. Biol. 327 (2003) 1149-1154
-
(2003)
J. Mol. Biol.
, vol.327
, pp. 1149-1154
-
-
Gong, H.1
Isom, D.G.2
Srinivasan, R.3
Rose, G.D.4
-
110
-
-
33746828217
-
Small proteins fold through transition states with native-like topologies
-
Pandit A.D., Jha A., Freed K.F., and Sosnick T.R. Small proteins fold through transition states with native-like topologies. J. Mol. Biol. 361 (2006) 755-770
-
(2006)
J. Mol. Biol.
, vol.361
, pp. 755-770
-
-
Pandit, A.D.1
Jha, A.2
Freed, K.F.3
Sosnick, T.R.4
-
111
-
-
48749087319
-
Quantifying the structural requirements of the folding transition state of protein A and other systems
-
Baxa M.C., Freed K.F., and Sosnick T.R. Quantifying the structural requirements of the folding transition state of protein A and other systems. J. Mol. Biol. 381 (2008) 1362-1381
-
(2008)
J. Mol. Biol.
, vol.381
, pp. 1362-1381
-
-
Baxa, M.C.1
Freed, K.F.2
Sosnick, T.R.3
-
112
-
-
24044551638
-
Transition state contact orders correlate with protein folding rates
-
Paci E., Lindorff-Larsen K., Dobson C.M., Karplus M., and Vendruscolo M. Transition state contact orders correlate with protein folding rates. J. Mol. Biol. 352 (2005) 495-500
-
(2005)
J. Mol. Biol.
, vol.352
, pp. 495-500
-
-
Paci, E.1
Lindorff-Larsen, K.2
Dobson, C.M.3
Karplus, M.4
Vendruscolo, M.5
-
113
-
-
0842332830
-
Commitment and nucleation in the protein G transition state
-
Hubner I.A., Shimada J., and Shakhnovich E.I. Commitment and nucleation in the protein G transition state. J. Mol. Biol. 336 (2004) 745-761
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 745-761
-
-
Hubner, I.A.1
Shimada, J.2
Shakhnovich, E.I.3
-
114
-
-
65649104671
-
Interplaying roles of native topology and chain length in marginally cooperative and noncooperative folding of small protein fragments
-
In press. doi:10.1002/qua.22272
-
Badasyan, A., Liu, Z. & Chan, H. S. (2009). Interplaying roles of native topology and chain length in marginally cooperative and noncooperative folding of small protein fragments. Int. J. Quantum Chem. In press. doi:10.1002/qua.22272.
-
(2009)
Int. J. Quantum Chem
-
-
Badasyan, A.1
Liu, Z.2
Chan, H.S.3
-
115
-
-
7044226061
-
The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties
-
Scott K.A., Batey S., Hooton K.A., and Clarke J. The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties. J. Mol. Biol. 344 (2004) 195-205
-
(2004)
J. Mol. Biol.
, vol.344
, pp. 195-205
-
-
Scott, K.A.1
Batey, S.2
Hooton, K.A.3
Clarke, J.4
-
116
-
-
0036829967
-
Complete change of the protein folding transition state upon circular permutation
-
Lindberg M., Tangrot J., and Oliveberg M. Complete change of the protein folding transition state upon circular permutation. Nat. Struct. Biol. 9 (2002) 818-822
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 818-822
-
-
Lindberg, M.1
Tangrot, J.2
Oliveberg, M.3
-
117
-
-
0036678120
-
Experimental evaluation of topological parameters determining protein-folding rates
-
Miller E.J., Fischer K.F., and Marqusee S. Experimental evaluation of topological parameters determining protein-folding rates. Proc. Natl Acad. Sci. USA 99 (2002) 10359-10363
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 10359-10363
-
-
Miller, E.J.1
Fischer, K.F.2
Marqusee, S.3
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