-
2
-
-
0008849934
-
A study of the pressure dependence of the partial specific volume of macromolecules in solution by compression measurements in the range 1-8000 atm
-
Andersson GR. 1963. A study of the pressure dependence of the partial specific volume of macromolecules in solution by compression measurements in the range 1-8000 atm. Ark. Kemi 20:513-71
-
(1963)
Ark. Kemi
, vol.20
, pp. 513-571
-
-
Andersson, G.R.1
-
3
-
-
0034581327
-
Role of the molten globule state in protein folding
-
Arai M, Kuwajima K. 2000. Role of the molten globule state in protein folding. Adv. Protein Chem. 53:209-82
-
(2000)
Adv. Protein Chem.
, vol.53
, pp. 209-282
-
-
Arai, M.1
Kuwajima, K.2
-
4
-
-
0001384941
-
The velocity of sound in electrolytic solutions
-
Barnatt S. 1952. The velocity of sound in electrolytic solutions. J. Chem. Phys. 20:278-79
-
(1952)
J. Chem. Phys.
, vol.20
, pp. 278-279
-
-
Barnatt, S.1
-
6
-
-
0014952474
-
Thermodynamics of protein denaturation. Effect of pressure on the denaturation of ribonuclease A
-
Brandts JF, Oliveira RJ, Westort C. 1970. Thermodynamics of protein denaturation. Effect of pressure on the denaturation of ribonuclease A. Biochemistry. 9:1038-47
-
(1970)
Biochemistry
, vol.9
, pp. 1038-1047
-
-
Brandts, J.F.1
Oliveira, R.J.2
Westort, C.3
-
7
-
-
0014289884
-
Temperature coefficients of protein partial volumes
-
Bull HB, Breese K. 1968. Temperature coefficients of protein partial volumes. J. Phys. Chem. 72:1817-19
-
(1968)
J. Phys. Chem.
, vol.72
, pp. 1817-1819
-
-
Bull, H.B.1
Breese, K.2
-
8
-
-
0015713752
-
Temperature dependence of partial volumes of proteins
-
Bull HB, Breese K. 1973. Temperature dependence of partial volumes of proteins. Biopolymers 12:2351-58
-
(1973)
Biopolymers
, vol.12
, pp. 2351-2358
-
-
Bull, H.B.1
Breese, K.2
-
9
-
-
0034704986
-
Calorimetric evidence for a native-like conformation of hen egg-white lysozyme dissolved in glycerol
-
Burova TV, Grinberg NV, Grinberg VY, Rariy RV, Klibanov AM. 2000. Calorimetric evidence for a native-like conformation of hen egg-white lysozyme dissolved in glycerol. Biochim. Biophys. Acta 1478:309-17
-
(2000)
Biochim. Biophys. Acta
, vol.1478
, pp. 309-317
-
-
Burova, T.V.1
Grinberg, N.V.2
Grinberg, V.Y.3
Rariy, R.V.4
Klibanov, A.M.5
-
10
-
-
9944232242
-
Group contributions to the thermodynamic properties of non-ionic organic solutes in dilute aqueous solution
-
Cabani S, Gianni P, Mollica V, Lepori L. 1981. Group contributions to the thermodynamic properties of non-ionic organic solutes in dilute aqueous solution. J. Solut. Chem. 10:563-95
-
(1981)
J. Solut. Chem.
, vol.10
, pp. 563-595
-
-
Cabani, S.1
Gianni, P.2
Mollica, V.3
Lepori, L.4
-
11
-
-
0035924822
-
Structural thermodynamics of hydration
-
Chalikian TV. 2001. Structural thermodynamics of hydration. J. Phys. Chem. B 105:12566-78
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 12566-12578
-
-
Chalikian, T.V.1
-
12
-
-
0030034601
-
Compressibility as a means to detect and characterize globular protein states
-
Chalikian TV, Breslauer KJ. 1996. Compressibility as a means to detect and characterize globular protein states. Proc. Natl. Acad. Sci. USA 93:1012-14
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 1012-1014
-
-
Chalikian, T.V.1
Breslauer, K.J.2
-
13
-
-
0030298077
-
On volume changes accompanying conformational transitions of biopolymers
-
Chalikian TV, Breslauer KJ. 1996. On volume changes accompanying conformational transitions of biopolymers. Biopolymers 39:619-26
-
(1996)
Biopolymers
, vol.39
, pp. 619-626
-
-
Chalikian, T.V.1
Breslauer, K.J.2
-
14
-
-
0031790423
-
Thermodynamic analysis of biomolecules: A volumetric approach
-
Chalikian TV, Breslauer KJ. 1998. Thermodynamic analysis of biomolecules: a volumetric approach. Curr. Opin. Struct. Biol. 8:657-64
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 657-664
-
-
Chalikian, T.V.1
Breslauer, K.J.2
-
15
-
-
0000137680
-
Volumetric properties of nucleic acids
-
Chalikian TV, Breslauer KJ. 1998. Volumetric properties of nucleic acids. Biopolymers 48:264-80
-
(1998)
Biopolymers
, vol.48
, pp. 264-280
-
-
Chalikian, T.V.1
Breslauer, K.J.2
-
16
-
-
0029011017
-
Volumetric characterizations of the native, molten globule, and unfolded states of cytochrome c at acidic pH
-
Chalikian TV, Gindikin VS, Breslauer KJ. 1995. Volumetric characterizations of the native, molten globule, and unfolded states of cytochrome c at acidic pH. J. Mol. Biol. 250:291-306
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 291-306
-
-
Chalikian, T.V.1
Gindikin, V.S.2
Breslauer, K.J.3
-
17
-
-
0030059691
-
Spectroscopic and volumetric investigation of cytochrome c unfolding at alkaline ph: Characterization of the base induced unfolded state at 25°C
-
Chalikian TV, Gindikin VS, Breslauer KJ. 1996. Spectroscopic and volumetric investigation of cytochrome c unfolding at alkaline pH: characterization of the base induced unfolded state at 25°C. FASEB J. 10:164-70
-
(1996)
FASEB J.
, vol.10
, pp. 164-170
-
-
Chalikian, T.V.1
Gindikin, V.S.2
Breslauer, K.J.3
-
18
-
-
0031709390
-
Hydration of diglycyl tripeptides with non-polar side chains: A volumetric study
-
Chalikian TV, Gindikin VS, Breslauer KJ. 1998. Hydration of diglycyl tripeptides with non-polar side chains: a volumetric study. Biophys. Chem. 75:57-71
-
(1998)
Biophys. Chem.
, vol.75
, pp. 57-71
-
-
Chalikian, T.V.1
Gindikin, V.S.2
Breslauer, K.J.3
-
19
-
-
0001174307
-
Ultrasonic study of proton-transfer reactions in aqueous solutions of amino acids
-
Chalikian TV, Kharakoz DP, Sarvazyan AP, Cain CA, McGough RJ, et al. 1992. Ultrasonic study of proton-transfer reactions in aqueous solutions of amino acids. J. Phys. Chem. 96:876-83
-
(1992)
J. Phys. Chem.
, vol.96
, pp. 876-883
-
-
Chalikian, T.V.1
Kharakoz, D.P.2
Sarvazyan, A.P.3
Cain, C.A.4
McGough, R.J.5
-
21
-
-
0028413422
-
Partial molar volumes, expansibilities, and compressibilities of oligoglycines in aqueous solutions at 18-55°C
-
Chalikian TV, Sarvazyan AP, Funck T, Breslauer KJ. 1994. Partial molar volumes, expansibilities, and compressibilities of oligoglycines in aqueous solutions at 18-55°C. Biopolymers 34:541-53
-
(1994)
Biopolymers
, vol.34
, pp. 541-553
-
-
Chalikian, T.V.1
Sarvazyan, A.P.2
Funck, T.3
Breslauer, K.J.4
-
22
-
-
0008047756
-
Hydration of globular proteins as derived from the volume and compressibility measurements: Cross correlating thermodynamic and structural data
-
Chalikian TV, Totrov M, Abagyan R, Breslauer KJ. 1996. Hydration of globular proteins as derived from the volume and compressibility measurements: cross correlating thermodynamic and structural data. J. Mol. Biol. 260:588-603
-
(1996)
J. Mol. Biol.
, vol.260
, pp. 588-603
-
-
Chalikian, T.V.1
Totrov, M.2
Abagyan, R.3
Breslauer, K.J.4
-
23
-
-
0343247668
-
The native and the heat-induced denatured states of α -chymotrypsinogen A: A thermodynamic and spectroscopic study
-
Chalikian TV, ViSlker J, Anafi D, Breslauer KJ. 1997. The native and the heat-induced denatured states of α-chymotrypsinogen A: a thermodynamic and spectroscopic study. J. Mol. Biol. 274:237-52
-
(1997)
J. Mol. Biol.
, vol.274
, pp. 237-252
-
-
Chalikian, T.V.1
ViSlker, J.2
Anafi, D.3
Breslauer, K.J.4
-
24
-
-
12044254701
-
A direct measure of the contribution of solvent reorganization to the enthalpy of ligand-binding
-
Chervenak MC, Toone EJ. 1994. A direct measure of the contribution of solvent reorganization to the enthalpy of ligand-binding. J. Am. Chem. Soc. 116:10533-39
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 10533-10539
-
-
Chervenak, M.C.1
Toone, E.J.2
-
25
-
-
0021118508
-
Principles that determine the structure of proteins
-
Chothia C. 1984. Principles that determine the structure of proteins. Annu. Rev. Biochem. 53:537-72
-
(1984)
Annu. Rev. Biochem.
, vol.53
, pp. 537-572
-
-
Chothia, C.1
-
26
-
-
0000538815
-
Analytical molecular surface calculation
-
Connolly MJ. 1983. Analytical molecular surface calculation. J. Appl. Crystallogr. 16:548-58
-
(1983)
J. Appl. Crystallogr.
, vol.16
, pp. 548-558
-
-
Connolly, M.J.1
-
27
-
-
0021107965
-
Solvent-accessible surfaces of proteins and nucleic acids
-
Connolly MJ. 1983. Solvent-accessible surfaces of proteins and nucleic acids. Science 221:709-13
-
(1983)
Science
, vol.221
, pp. 709-713
-
-
Connolly, M.J.1
-
28
-
-
0000725483
-
Thermodynamic fluctuations in protein molecules
-
Cooper A. 1976. Thermodynamic fluctuations in protein molecules. Proc. Natl. Acad. Sci. USA 73:2740-41
-
(1976)
Proc. Natl. Acad. Sci. USA
, vol.73
, pp. 2740-2741
-
-
Cooper, A.1
-
29
-
-
0021726687
-
Protein fluctuations and the thermodynamic uncertainty principle
-
Cooper A. 1984. Protein fluctuations and the thermodynamic uncertainty principle. Prog. Biophys. Mol. Biol. 44:181-214
-
(1984)
Prog. Biophys. Mol. Biol.
, vol.44
, pp. 181-214
-
-
Cooper, A.1
-
30
-
-
20644465398
-
Insights into protein compressibility from molecular dynamics simulations
-
Dadarlat VM, Post CB. 2001. Insights into protein compressibility from molecular dynamics simulations. J. Phys. Chem. B 105:715-24
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 715-724
-
-
Dadarlat, V.M.1
Post, C.B.2
-
31
-
-
0039011892
-
Relation between molal volumes and molal compressibilities from viewpoint of scaled-particle theory. Prediction of apparent molal compressibilities of transfer
-
Desrosiers N, Lucas M. 1974. Relation between molal volumes and molal compressibilities from viewpoint of scaled-particle theory. Prediction of apparent molal compressibilities of transfer. J. Phys. Chem. 78:2367-69
-
(1974)
J. Phys. Chem.
, vol.78
, pp. 2367-2369
-
-
Desrosiers, N.1
Lucas, M.2
-
33
-
-
0000493265
-
The role of water in protein-ligand interactions: Volumetric characterizations of the binding of 2′-CMP and 3′-CMP to ribonuclease A
-
Dubins DN, Filfil R, Macgregor RB Jr, Chalikian TV. 2000. The role of water in protein-ligand interactions: volumetric characterizations of the binding of 2′-CMP and 3′-CMP to ribonuclease A. J. Phys. Chem. B 104:390-401
-
(2000)
J. Phys. Chem. B
, vol.104
, pp. 390-401
-
-
Dubins, D.N.1
Filfil, R.2
Macgregor R.B., Jr.3
Chalikian, T.V.4
-
35
-
-
0033975702
-
Structural energetics of protein folding and binding
-
Edgcomb SP, Murphy KP. 2000. Structural energetics of protein folding and binding. Curr. Opin. Biotechnol. 11:62-66
-
(2000)
Curr. Opin. Biotechnol.
, vol.11
, pp. 62-66
-
-
Edgcomb, S.P.1
Murphy, K.P.2
-
36
-
-
0015700007
-
Ultrasonic measurements with milliliter liquid samples in the 0.5-100 MHz range
-
Eggers F, Funck Th. 1973. Ultrasonic measurements with milliliter liquid samples in the 0.5-100 MHz range. Rev. Sci. Instrum. 44:969-78
-
(1973)
Rev. Sci. Instrum.
, vol.44
, pp. 969-978
-
-
Eggers, F.1
Funck, Th.2
-
37
-
-
0038914607
-
Broad-band ultrasonic measurement techniques for liquids
-
Eggers F, Kaatze U. 1996. Broad-band ultrasonic measurement techniques for liquids. Meas. Sci. Technol. 7:1-19
-
(1996)
Meas. Sci. Technol.
, vol.7
, pp. 1-19
-
-
Eggers, F.1
Kaatze, U.2
-
40
-
-
0034625325
-
Volumetric and spectroscopic characterizations of the native and acid-induced denatured states of staphylococcal nuclease
-
Filfil R, Chalikian TV. 2000. Volumetric and spectroscopic characterizations of the native and acid-induced denatured states of staphylococcal nuclease. J. Mol. Biol. 299:829-44
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 829-844
-
-
Filfil, R.1
Chalikian, T.V.2
-
41
-
-
0023652260
-
Thermal expansion of a protein
-
Frauenfelder H, Hartmann H, Karplus M, Kuntz ID, Kuriyan J, et al. 1987. Thermal expansion of a protein. Biochemistry 26:254-61
-
(1987)
Biochemistry
, vol.26
, pp. 254-261
-
-
Frauenfelder, H.1
Hartmann, H.2
Karplus, M.3
Kuntz, I.D.4
Kuriyan, J.5
-
42
-
-
0029132790
-
Thermodynamics of partly folded intermediates in proteins
-
Freire E. 1995. Thermodynamics of partly folded intermediates in proteins. Annu. Rev. Biophys. Biomol. Struct. 24:141-65
-
(1995)
Annu. Rev. Biophys. Biomol. Struct.
, vol.24
, pp. 141-165
-
-
Freire, E.1
-
43
-
-
0029737544
-
Testing the correlation between ΔA and ΔV of protein unfolding using m value mutants of staphylococcal nuclease
-
Frye KJ, Perman CS, Royer CA. 1996. Testing the correlation between ΔA and ΔV of protein unfolding using m value mutants of staphylococcal nuclease. Biochemistry 35:10234-39
-
(1996)
Biochemistry
, vol.35
, pp. 10234-10239
-
-
Frye, K.J.1
Perman, C.S.2
Royer, C.A.3
-
44
-
-
0032516448
-
562 examined by the dependence of hydrogen exchange on hydrostatic pressure
-
562 examined by the dependence of hydrogen exchange on hydrostatic pressure. Biochemistry 37:9877-83
-
(1998)
Biochemistry
, vol.37
, pp. 9877-9883
-
-
Fuentes, E.J.1
Wand, A.J.2
-
45
-
-
0026060563
-
Flexibility of globular proteins in water as revealed by compressibility
-
ed. H Levine, L Slade. New York: Plenum
-
Gekko K. 1991. Flexibility of globular proteins in water as revealed by compressibility. In Water Relationships in Food, ed. H Levine, L Slade, pp. 753-71. New York: Plenum
-
(1991)
Water Relationships in Food
, pp. 753-771
-
-
Gekko, K.1
-
46
-
-
0022999267
-
Compressibility-structure relationship of globular proteins
-
Gekko K, Hasegawa Y. 1986. Compressibility-structure relationship of globular proteins. Biochemistry 25:6563-71
-
(1986)
Biochemistry
, vol.25
, pp. 6563-6571
-
-
Gekko, K.1
Hasegawa, Y.2
-
47
-
-
0000092070
-
Effect of temperature on the compressibility of native globular proteins
-
Gekko K, Hasegawa Y. 1989. Effect of temperature on the compressibility of native globular proteins. J. Phys. Chem. 93:426-29
-
(1989)
J. Phys. Chem.
, vol.93
, pp. 426-429
-
-
Gekko, K.1
Hasegawa, Y.2
-
48
-
-
33845561444
-
Compressibility of globular proteins in water at 25°C
-
Gekko K, Noguchi H. 1979. Compressibility of globular proteins in water at 25°C. J. Phys. Chem. 83:2706-14
-
(1979)
J. Phys. Chem.
, vol.83
, pp. 2706-2714
-
-
Gekko, K.1
Noguchi, H.2
-
49
-
-
0032347515
-
Compressibility and volume changes of lysozyme due to inhibitor binding
-
Gekko K, Yamagami K. 1998. Compressibility and volume changes of lysozyme due to inhibitor binding. Chem. Lett. pp. 839-40
-
(1998)
Chem. Lett.
, pp. 839-840
-
-
Gekko, K.1
Yamagami, K.2
-
51
-
-
0039712663
-
Group contributions to the partial molar volume of organic solutes in aqueous solution
-
Gianni P, Lepori L. 1996. Group contributions to the partial molar volume of organic solutes in aqueous solution. J. Solut. Chem. 25:1-42
-
(1996)
J. Solut. Chem.
, vol.25
, pp. 1-42
-
-
Gianni, P.1
Lepori, L.2
-
52
-
-
0039283337
-
The partial molar heat capacity and volume of the peptide backbone of proteins in aqueous solution
-
Häckel M, Hedwig GR, Hinz H-J. 1998. The partial molar heat capacity and volume of the peptide backbone of proteins in aqueous solution. Biophys. Chem. 73:163-77
-
(1998)
Biophys. Chem.
, vol.73
, pp. 163-177
-
-
Häckel, M.1
Hedwig, G.R.2
Hinz, H.-J.3
-
53
-
-
0037605067
-
Partial molar volumes of proteins: Amino acid side-chain contributions derived from the partial molar volumes of some tripeptides over temperature range 10-90°C
-
Häckel M, Hinz H-J, Hedwig GR. 1999. Partial molar volumes of proteins: amino acid side-chain contributions derived from the partial molar volumes of some tripeptides over temperature range 10-90°C. Biophys. Chem. 82:35-50
-
(1999)
Biophys. Chem.
, vol.82
, pp. 35-50
-
-
Häckel, M.1
Hinz, H.-J.2
Hedwig, G.R.3
-
54
-
-
0034327382
-
The partial molar volumes of some tetra- and pentapeptides in aqueous solution: A test of amino acid side-chain additivity for unfolded proteins
-
Häckel M, Hinz H-J, Hedwig GR. 2000. The partial molar volumes of some tetra- and pentapeptides in aqueous solution: a test of amino acid side-chain additivity for unfolded proteins. Phys. Chem. Chem. Phys. 2:4843-49
-
(2000)
Phys. Chem. Chem. Phys.
, vol.2
, pp. 4843-4849
-
-
Häckel, M.1
Hinz, H.-J.2
Hedwig, G.R.3
-
56
-
-
0030606335
-
Thermodynamics of sequence-specific protein-DNA interactions
-
Härd T, Lundbäck T. 1996. Thermodynamics of sequence-specific protein-DNA interactions. Biophys. Chem. 62:121-39
-
(1996)
Biophys. Chem.
, vol.62
, pp. 121-139
-
-
Härd, T.1
Lundbäck, T.2
-
57
-
-
0015236387
-
Reversible pressure-temperature denaturation of chymotrypsinogen
-
Hawley SA. 1971. Reversible pressure-temperature denaturation of chymotrypsinogen. Biochemistry 10:2436-42
-
(1971)
Biochemistry
, vol.10
, pp. 2436-2442
-
-
Hawley, S.A.1
-
58
-
-
34249928742
-
Thermodynamic properties of peptide solutions. 7. Partial molar isentropic pressure coefficients of some dipeptides in aqueous solutions
-
Hedwig GR, Høiland H. 1991. Thermodynamic properties of peptide solutions. 7. Partial molar isentropic pressure coefficients of some dipeptides in aqueous solutions. J. Solut. Chem. 20:1113-27
-
(1991)
J. Solut. Chem.
, vol.20
, pp. 1113-1127
-
-
Hedwig, G.R.1
Høiland, H.2
-
59
-
-
0028209746
-
Thermodynamic properties of peptide solutions. Part 11. Partial molar isentropic pressure coefficients in aqueous solutions of some tripeptides that model protein side-chains
-
Hedwig GR, Høiland H. 1994. Thermodynamic properties of peptide solutions. Part 11. Partial molar isentropic pressure coefficients in aqueous solutions of some tripeptides that model protein side-chains. Biophys. Chem. 49:175-81
-
(1994)
Biophys. Chem.
, vol.49
, pp. 175-181
-
-
Hedwig, G.R.1
Høiland, H.2
-
60
-
-
0020017199
-
High pressure effects on proteins and other biomolecules
-
Heremans K. 1982. High pressure effects on proteins and other biomolecules. Annu. Rev. Biophys. Bioeng. 11:1-21
-
(1982)
Annu. Rev. Biophys. Bioeng.
, vol.11
, pp. 1-21
-
-
Heremans, K.1
-
61
-
-
0031714901
-
Protein structure and dynamics at high pressure
-
Heremans K, Smeller L. 1998. Protein structure and dynamics at high pressure. Biochim. Biophys. Acta 1386:353-70
-
(1998)
Biochim. Biophys. Acta
, vol.1386
, pp. 353-370
-
-
Heremans, K.1
Smeller, L.2
-
62
-
-
0026416498
-
Anomalous temperature dependence of the thermal expansion of proteins
-
Hiebl M, Maksymiw R. 1991. Anomalous temperature dependence of the thermal expansion of proteins. Biopolymers 31:161-67
-
(1991)
Biopolymers
, vol.31
, pp. 161-167
-
-
Hiebl, M.1
Maksymiw, R.2
-
64
-
-
0000345310
-
Pressure dependence of the volumes of ionization of carboxylic acids at 25, 35, 45°C and 1-200 bar
-
Høiland H. 1974. Pressure dependence of the volumes of ionization of carboxylic acids at 25, 35, 45°C and 1-200 bar. J. Chem. Soc. Faraday Trans. 1 70:1180-85
-
(1974)
J. Chem. Soc. Faraday Trans. 1
, vol.70
, pp. 1180-1185
-
-
Høiland, H.1
-
65
-
-
37049117838
-
Volumes of ionization of dicarboxylic acids in aqueous solution from density measurements at 25°C
-
Høiland H. 1975. Volumes of ionization of dicarboxylic acids in aqueous solution from density measurements at 25°C. J. Chem. Soc. Faraday Trans. 1 71:797-802
-
(1975)
J. Chem. Soc. Faraday Trans. 1
, vol.71
, pp. 797-802
-
-
Høiland, H.1
-
68
-
-
37049129080
-
Partial molal volumes and volumes of ionization of hydrocarboxylic acids in aqueous solution at 25, 30, and 35°C
-
Høiland H, Vikingstad E. 1975. Partial molal volumes and volumes of ionization of hydrocarboxylic acids in aqueous solution at 25, 30, and 35°C. J. Chem. Soc. Faraday Trans. 1 71:2007-16
-
(1975)
J. Chem. Soc. Faraday Trans. 1
, vol.71
, pp. 2007-2016
-
-
Høiland, H.1
Vikingstad, E.2
-
69
-
-
0000918206
-
Isentropic apparent molal compressibilities and compressibilities of ionization of carboxylic acids in aqueous solution
-
Høiland H, Vikingstad E. 1976. Isentropic apparent molal compressibilities and compressibilities of ionization of carboxylic acids in aqueous solution. J. Chem. Soc. Faraday Trans. 1 72:1441-47
-
(1976)
J. Chem. Soc. Faraday Trans. 1
, vol.72
, pp. 1441-1447
-
-
Høiland, H.1
Vikingstad, E.2
-
70
-
-
0033934245
-
Pressure-induced local unfolding of the Ras binding domain of Ra1GDS
-
Inoue K, Yamada H, Akasaka K, Hermann C, Kremer W, et al. 2000. Pressure-induced local unfolding of the Ras binding domain of Ra1GDS. Nat. Struct. Biol. 7:547-50
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 547-550
-
-
Inoue, K.1
Yamada, H.2
Akasaka, K.3
Hermann, C.4
Kremer, W.5
-
71
-
-
0001689633
-
Volumetric properties of aqueous solutions of bovine serum albumin, human serum albumin, and human hemoglobin
-
Iqbal M, Verrall RE. 1987. Volumetric properties of aqueous solutions of bovine serum albumin, human serum albumin, and human hemoglobin. J. Phys. Chem. 91:1935-41
-
(1987)
J. Phys. Chem.
, vol.91
, pp. 1935-1941
-
-
Iqbal, M.1
Verrall, R.E.2
-
72
-
-
0024296532
-
Implications of protein folding. Additivity schemes for volumes and compressibilities
-
Iqbal M, Verrall RE. 1988. Implications of protein folding. Additivity schemes for volumes and compressibilities. J. Biol. Chem. 263:4159-65
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 4159-4165
-
-
Iqbal, M.1
Verrall, R.E.2
-
73
-
-
0001028096
-
On the adiabatic compressibility of aqueous solutions
-
Jacobson B. 1950. On the adiabatic compressibility of aqueous solutions. Ark. Kemi 2:177-210
-
(1950)
Ark. Kemi
, vol.2
, pp. 177-210
-
-
Jacobson, B.1
-
74
-
-
0030736323
-
Protein-DNA recognition complexes: Conservation of structure and binding energy in the transition state
-
Jen-Jacobson L. 1997. Protein-DNA recognition complexes: conservation of structure and binding energy in the transition state. Biopolymers 44:153-80
-
(1997)
Biopolymers
, vol.44
, pp. 153-180
-
-
Jen-Jacobson, L.1
-
75
-
-
0034436051
-
Buried charged surface in proteins
-
Kajander T, Kahn PC, Passila SH, Cohen DC, Lehtiö L, et al. 2000. Buried charged surface in proteins. Structure 8:1203-14
-
(2000)
Structure
, vol.8
, pp. 1203-1214
-
-
Kajander, T.1
Kahn, P.C.2
Passila, S.H.3
Cohen, D.C.4
Lehtiö, L.5
-
76
-
-
21944444619
-
Compressibility and volume changes of lysozyme due to guanidine hydrochloride denaturation
-
Kamiyama T, Gekko K. 1997. Compressibility and volume changes of lysozyme due to guanidine hydrochloride denaturation. Chem. Lett. 1063-64
-
(1997)
Chem. Lett.
, pp. 1063-1064
-
-
Kamiyama, T.1
Gekko, K.2
-
77
-
-
0034704984
-
Effect of ligand binding on the flexibility of dihydrofolate reductase as revealed by compressibility
-
Kamiyama T, Gekko K. 2000. Effect of ligand binding on the flexibility of dihydrofolate reductase as revealed by compressibility. Biochim. Biophys. Acta 1478:257-66
-
(2000)
Biochim. Biophys. Acta
, vol.1478
, pp. 257-266
-
-
Kamiyama, T.1
Gekko, K.2
-
78
-
-
0032754813
-
Polyol-induced molten globule of cytochrome c: An evidence for stabilization by hydrophobic interaction
-
Kamiyama T, Sadahide Y, Nogusa Y, Gekko K. 1999. Polyol-induced molten globule of cytochrome c: an evidence for stabilization by hydrophobic interaction. Biochim. Biophys. Acta 1434:44-57
-
(1999)
Biochim. Biophys. Acta
, vol.1434
, pp. 44-57
-
-
Kamiyama, T.1
Sadahide, Y.2
Nogusa, Y.3
Gekko, K.4
-
79
-
-
0000108733
-
Compressibility of lysozyme protein crystals by X-ray diffraction
-
Katrusiak A, Dauter Z. 1996. Compressibility of lysozyme protein crystals by X-ray diffraction. Acta Crystallogr. D 52:607-8
-
(1996)
Acta Crystallogr. D
, vol.52
, pp. 607-608
-
-
Katrusiak, A.1
Dauter, Z.2
-
80
-
-
36849150819
-
Protein stabilization - Thermodynamics of unfolding
-
Kauzmann W. 1987. Protein stabilization - thermodynamics of unfolding. Nature 325:763-64
-
(1987)
Nature
, vol.325
, pp. 763-764
-
-
Kauzmann, W.1
-
81
-
-
0001129819
-
Volume changes in protein reactions. II. Comparison of ionization reactions in proteins and small molecules
-
Kauzmann W, Bodanszky A, Rasper J. 1962. Volume changes in protein reactions. II. Comparison of ionization reactions in proteins and small molecules. J. Am. Chem. Soc. 84:1777-88
-
(1962)
J. Am. Chem. Soc.
, vol.84
, pp. 1777-1788
-
-
Kauzmann, W.1
Bodanszky, A.2
Rasper, J.3
-
82
-
-
0024438754
-
Volumetric properties of proteins and their analogues in diluted water solutions. 1. Partial volumes of amino acids at 15-55°C
-
Kharakoz DP. 1989. Volumetric properties of proteins and their analogues in diluted water solutions. 1. Partial volumes of amino acids at 15-55°C. Biophys. Chem. 34:115-25
-
(1989)
Biophys. Chem.
, vol.34
, pp. 115-125
-
-
Kharakoz, D.P.1
-
83
-
-
33751499294
-
Volumetric properties of proteins and their analogues in diluted water solutions. 2. Partial adiabatic compressibilities of amino acids at 15-70°C
-
Kharakoz DP. 1991. Volumetric properties of proteins and their analogues in diluted water solutions. 2. Partial adiabatic compressibilities of amino acids at 15-70°C. J. Phys. Chem. 95:5634-42
-
(1991)
J. Phys. Chem.
, vol.95
, pp. 5634-5642
-
-
Kharakoz, D.P.1
-
84
-
-
0001445637
-
Partial molar volumes of molecules of arbitrary shape and the effect of hydrogen bonding with water
-
Kharakoz DP. 1992. Partial molar volumes of molecules of arbitrary shape and the effect of hydrogen bonding with water. J. Solut. Chem. 21:569-95
-
(1992)
J. Solut. Chem.
, vol.21
, pp. 569-595
-
-
Kharakoz, D.P.1
-
85
-
-
0030787855
-
Partial volumes and compressibilities of extended polypeptide chains in aqueous solution: Additivity scheme and implication of protein unfolding at normal and high pressure
-
Kharakoz DP. 1997. Partial volumes and compressibilities of extended polypeptide chains in aqueous solution: additivity scheme and implication of protein unfolding at normal and high pressure. Biochemistry 36:10276-85
-
(1997)
Biochemistry
, vol.36
, pp. 10276-10285
-
-
Kharakoz, D.P.1
-
86
-
-
0033932840
-
Protein compressibility, dynamics, and pressure
-
Kharakoz DP. 2000. Protein compressibility, dynamics, and pressure. Biophys. J. 79:511-25
-
(2000)
Biophys. J.
, vol.79
, pp. 511-525
-
-
Kharakoz, D.P.1
-
87
-
-
0031019791
-
Molten globule of human α-lactalbumin: Hydration, density, and compressibility of the interior
-
Kharakoz DP, Bychkova VE. 1997. Molten globule of human α-lactalbumin: hydration, density, and compressibility of the interior. Biochemistry 36:1882-90
-
(1997)
Biochemistry
, vol.36
, pp. 1882-1890
-
-
Kharakoz, D.P.1
Bychkova, V.E.2
-
88
-
-
0027535729
-
Hydrational and intrinsic compressibilities of globular proteins
-
Kharakoz DP, Sarvazyan AP. 1993. Hydrational and intrinsic compressibilities of globular proteins. Biopolymers 33:11-26
-
(1993)
Biopolymers
, vol.33
, pp. 11-26
-
-
Kharakoz, D.P.1
Sarvazyan, A.P.2
-
89
-
-
33947299838
-
Volume changes for ionization of formic, acetic, and n-butyric acids and the glycinium ion in aqueous solution at 25°C
-
King EJ. 1969. Volume changes for ionization of formic, acetic, and n-butyric acids and the glycinium ion in aqueous solution at 25°C. J. Phys. Chem. 73:1220-32
-
(1969)
J. Phys. Chem.
, vol.73
, pp. 1220-1232
-
-
King, E.J.1
-
90
-
-
0031104802
-
Why are enzymes less active in organic solvents than in water?
-
Klibanov AM. 1997. Why are enzymes less active in organic solvents than in water? Trends Biotechnol. 15:97-101
-
(1997)
Trends Biotechnol.
, vol.15
, pp. 97-101
-
-
Klibanov, A.M.1
-
91
-
-
0035843166
-
Improving enzymes by using them in organic solvents
-
Klibanov AM. 2001. Improving enzymes by using them in organic solvents. Nature 409:241-46
-
(2001)
Nature
, vol.409
, pp. 241-246
-
-
Klibanov, A.M.1
-
92
-
-
0033573999
-
Structure, thermostability, and conformational flexibility of hen egg-white lysozyme dissolved in glycerol
-
Knubovets T, Osterhout JJ, Connoly PJ, Klibanov AM. 1999. Structure, thermostability, and conformational flexibility of hen egg-white lysozyme dissolved in glycerol. Proc. Natl. Acad. Sci. USA 96:1262-67
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 1262-1267
-
-
Knubovets, T.1
Osterhout, J.J.2
Connoly, P.J.3
Klibanov, A.M.4
-
93
-
-
0023644307
-
Crystal structure of hen egg-white lysozyme at a hydrostatic pressure of 1000 atmospheres
-
Kundrot CE, Richards FM. 1987. Crystal structure of hen egg-white lysozyme at a hydrostatic pressure of 1000 atmospheres. J. Mol. Biol. 193:157-70
-
(1987)
J. Mol. Biol.
, vol.193
, pp. 157-170
-
-
Kundrot, C.E.1
Richards, F.M.2
-
97
-
-
0026018045
-
Isoenthalpic and isoentropic temperatures and the thermodynamics of protein denaturation
-
Lee B. 1991. Isoenthalpic and isoentropic temperatures and the thermodynamics of protein denaturation. Proc. Natl. Acad. Sci. USA 88:5154-58
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 5154-5158
-
-
Lee, B.1
-
98
-
-
0034349019
-
Partial molar volumes of ionic and nonionic organic solutes in water: A simple additivity scheme based on the intrinsic volume approach
-
Lepori L, Giani P. 2000. Partial molar volumes of ionic and nonionic organic solutes in water: a simple additivity scheme based on the intrinsic volume approach. J. Solut. Chem. 29:405-47
-
(2000)
J. Solut. Chem.
, vol.29
, pp. 405-447
-
-
Lepori, L.1
Giani, P.2
-
99
-
-
0032190305
-
Analytical shape computation of macromolecules. 1. Molecular area and volume through alpha shape
-
Liang J, Edelsbrunner H, Fu P, Sudhakar PV, Subramaniam S. 1998. Analytical shape computation of macromolecules. 1. Molecular area and volume through alpha shape. Proteins Struct. Funct. Genet. 33:1-17
-
(1998)
Proteins Struct. Funct. Genet.
, vol.33
, pp. 1-17
-
-
Liang, J.1
Edelsbrunner, H.2
Fu, P.3
Sudhakar, P.V.4
Subramaniam, S.5
-
102
-
-
0002889522
-
The new paradigm for protein research
-
ed. RB Gregory. New York/Basel/Hong Kong: Marcel Dekker
-
Lumry R. 1995. The new paradigm for protein research. In Protein-Solvent Interactions, ed. RB Gregory, pp. 1-141. New York/Basel/Hong Kong: Marcel Dekker
-
(1995)
Protein-Solvent Interactions
, pp. 1-141
-
-
Lumry, R.1
-
103
-
-
0036088602
-
The linkage between protein folding and functional cooperativity: Two sides of the same coin?
-
Luque I, Leavitt SA, Freire E. 2002. The linkage between protein folding and functional cooperativity: two sides of the same coin? Annu. Rev. Biophys. Biomol. Struct. 31:235-56
-
(2002)
Annu. Rev. Biophys. Biomol. Struct.
, vol.31
, pp. 235-256
-
-
Luque, I.1
Leavitt, S.A.2
Freire, E.3
-
104
-
-
0036215842
-
Dissecting the molecular origins of specific protein-nucleic acid recognition: Hydrostatic pressure and molecular dynamics
-
Lynch TW, Kosztin D, McLean MA, Schulten K, Sligar SG. 2002. Dissecting the molecular origins of specific protein-nucleic acid recognition: hydrostatic pressure and molecular dynamics. Biophys. J. 82:93-98
-
(2002)
Biophys. J.
, vol.82
, pp. 93-98
-
-
Lynch, T.W.1
Kosztin, D.2
McLean, M.A.3
Schulten, K.4
Sligar, S.G.5
-
105
-
-
0025126497
-
Reversible inhibition of EcoRI with elevated pressure
-
Macgregor RB Jr. 1990. Reversible inhibition of EcoRI with elevated pressure. Biochem. Biophys. Res. Commun. 170:775-78
-
(1990)
Biochem. Biophys. Res. Commun.
, vol.170
, pp. 775-778
-
-
Macgregor R.B., Jr.1
-
106
-
-
0006467940
-
Effect of hydrostatic pressure on nucleic acids
-
Macgregor RB Jr. 1998. Effect of hydrostatic pressure on nucleic acids. Biopolymers 48:253-63
-
(1998)
Biopolymers
, vol.48
, pp. 253-263
-
-
Macgregor R.B., Jr.1
-
107
-
-
0037171133
-
The interactions of nucleic acids at elevated hydrostatic pressure
-
Macgregor RB Jr. 2002. The interactions of nucleic acids at elevated hydrostatic pressure. Biochem. Biophys. Acta 1595:266-76
-
(2002)
Biochem. Biophys. Acta
, vol.1595
, pp. 266-276
-
-
Macgregor R.B., Jr.1
-
109
-
-
0025610122
-
Partial molar volumes of polypeptides and their constituent groups in aqueous solution over a broad temperature range
-
Makhatadze GI, Medvedkin VN, Privalov PL. 1990. Partial molar volumes of polypeptides and their constituent groups in aqueous solution over a broad temperature range. Biopolymers 30:1001-10
-
(1990)
Biopolymers
, vol.30
, pp. 1001-1010
-
-
Makhatadze, G.I.1
Medvedkin, V.N.2
Privalov, P.L.3
-
110
-
-
0034887146
-
Volume changes accompanying interaction of ligands with nucleic acids
-
Marky LA, Kupke DW, Kankia BI. 2001. Volume changes accompanying interaction of ligands with nucleic acids. Methods Enzymol. 340:149-65
-
(2001)
Methods Enzymol.
, vol.340
, pp. 149-165
-
-
Marky, L.A.1
Kupke, D.W.2
Kankia, B.I.3
-
111
-
-
37049117585
-
2O solvent isotope effects in adiabatic compressibility and volume of electrolytes and non-electrolytes: Relation to specificities of ionic solvation
-
2O solvent isotope effects in adiabatic compressibility and volume of electrolytes and non-electrolytes: relation to specificities of ionic solvation. J. Chem. Soc. Faraday Trans. 1 70:752-68
-
(1974)
J. Chem. Soc. Faraday Trans. 1
, vol.70
, pp. 752-768
-
-
Mathieson, J.G.1
Conway, B.E.2
-
112
-
-
0037117502
-
Is the first hydration shell of lysozyme of higher density than bulk water?
-
Merzel F, Smith JC. 2002. Is the first hydration shell of lysozyme of higher density than bulk water? Proc. Natl. Acad. Sci. USA 99:5378-83
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 5378-5383
-
-
Merzel, F.1
Smith, J.C.2
-
114
-
-
33947091942
-
The apparent molal volumes and adiabatic compressibilities of aqueous amino acids at 25°C
-
Millero FJ, Lo Surdo A, Shin C. 1978. The apparent molal volumes and adiabatic compressibilities of aqueous amino acids at 25°C. J. Phys. Chem. 82:784-92
-
(1978)
J. Phys. Chem.
, vol.82
, pp. 784-792
-
-
Millero, F.J.1
Lo Surdo, A.2
Shin, C.3
-
115
-
-
0001529341
-
Protein hydration and unfolding - Insights from experimental partial specific volumes and unfolded protein models
-
Murphy LR, Matubayasi N, Payne VA, Levy RM. 1998. Protein hydration and unfolding - insights from experimental partial specific volumes and unfolded protein models. Fold. Des. 3:105-18
-
(1998)
Fold. Des.
, vol.3
, pp. 105-118
-
-
Murphy, L.R.1
Matubayasi, N.2
Payne, V.A.3
Levy, R.M.4
-
118
-
-
0042702283
-
Use of an acoustic method to study the interaction between lysozyme and sodium dodecyl-sulfate
-
Nikitina TK, Nikitin SY. 1990. Use of an acoustic method to study the interaction between lysozyme and sodium dodecyl-sulfate. Mol. Biol. 24:656-61
-
(1990)
Mol. Biol.
, vol.24
, pp. 656-661
-
-
Nikitina, T.K.1
Nikitin, S.Y.2
-
119
-
-
0027373133
-
Adiabatic compressibility of molten globules
-
Nölting B, Sligar SG. 1993. Adiabatic compressibility of molten globules. Biochemistry 32:12319-23
-
(1993)
Biochemistry
, vol.32
, pp. 12319-12323
-
-
Nölting, B.1
Sligar, S.G.2
-
120
-
-
0001054914
-
Standard partial molal compressibilities by ultrasonics. 1. Sodium chloride and potassium chloride at 25°C
-
Owen BB, Simons HL. 1957. Standard partial molal compressibilities by ultrasonics. 1. Sodium chloride and potassium chloride at 25°C. J. Phys. Chem. 61:479-82
-
(1957)
J. Phys. Chem.
, vol.61
, pp. 479-482
-
-
Owen, B.B.1
Simons, H.L.2
-
121
-
-
0029859688
-
Intrinsic compressibility and volume compression in solvated proteins by molecular dynamics simulations at high pressure
-
Paci E, Marchi M. 1996. Intrinsic compressibility and volume compression in solvated proteins by molecular dynamics simulations at high pressure. Proc. Natl. Acad. Sci. USA 93:11609-14
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 11609-11614
-
-
Paci, E.1
Marchi, M.2
-
122
-
-
0031172372
-
On the volume of macromolecules
-
Paci E, Velikson B. 1997. On the volume of macromolecules. Biopolymers 41:785-97
-
(1997)
Biopolymers
, vol.41
, pp. 785-797
-
-
Paci, E.1
Velikson, B.2
-
123
-
-
0034700971
-
Pressure-induced unfolding/refolding of ribonuclease A: Static and kinetic Fourier transform infrared spectroscopy study
-
Panick G, Winter R. 2000. Pressure-induced unfolding/refolding of ribonuclease A: static and kinetic Fourier transform infrared spectroscopy study. Biochemistry 39:1862-69
-
(2000)
Biochemistry
, vol.39
, pp. 1862-1869
-
-
Panick, G.1
Winter, R.2
-
124
-
-
0029130871
-
Macromolecules and water: Probing with osmotic stress
-
Parsegian VA, Rand RP, Rau DC. 1995. Macromolecules and water: probing with osmotic stress. Methods Enzymol. 259:43-94
-
(1995)
Methods Enzymol
, vol.259
, pp. 43-94
-
-
Parsegian, V.A.1
Rand, R.P.2
Rau, D.C.3
-
125
-
-
0029619776
-
A novel basis for capsid stabilization by antiviral compounds
-
Phelps DK, Post CB. 1995. A novel basis for capsid stabilization by antiviral compounds. J. Mol. Biol. 254:544-51
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 544-551
-
-
Phelps, D.K.1
Post, C.B.2
-
126
-
-
9444282012
-
Aqueous solutions of nonpolar gases
-
Pierotti RA. 1965. Aqueous solutions of nonpolar gases. J. Phys. Chem. 69:281-88
-
(1965)
J. Phys. Chem.
, vol.69
, pp. 281-288
-
-
Pierotti, R.A.1
-
127
-
-
33747754400
-
A scaled particle theory of aqueous and nonaqueous solutions
-
Pierotti RA. 1976. A scaled particle theory of aqueous and nonaqueous solutions. Chem. Rev. 6:717-26
-
(1976)
Chem. Rev.
, vol.6
, pp. 717-726
-
-
Pierotti, R.A.1
-
128
-
-
0032574699
-
Pressure denaturation of proteins: Evaluation of compressibility effects
-
Prehoda KE, Mooberry ES, Markley JL. 1998. Pressure denaturation of proteins: evaluation of compressibility effects. Biochemistry 37:5785-90
-
(1998)
Biochemistry
, vol.37
, pp. 5785-5790
-
-
Prehoda, K.E.1
Mooberry, E.S.2
Markley, J.L.3
-
129
-
-
0030028764
-
Glycerol decreases the volume and compressibility of protein interior
-
Priev A, Almagor A, Yedgar S, Gavish B. 1996. Glycerol decreases the volume and compressibility of protein interior. Biochemistry 35:2061-66
-
(1996)
Biochemistry
, vol.35
, pp. 2061-2066
-
-
Priev, A.1
Almagor, A.2
Yedgar, S.3
Gavish, B.4
-
130
-
-
0030010408
-
Intermediate states in protein folding
-
Privalov PL. 1996. Intermediate states in protein folding. J. Mol. Biol. 258:707-25
-
(1996)
J. Mol. Biol.
, vol.258
, pp. 707-725
-
-
Privalov, P.L.1
-
132
-
-
0023051843
-
Internal cavities and buried waters in globular proteins
-
Rashin AA, Iofin M, Honig B. 1986. Internal cavities and buried waters in globular proteins. Biochemistry 25:3619-25
-
(1986)
Biochemistry
, vol.25
, pp. 3619-3625
-
-
Rashin, A.A.1
Iofin, M.2
Honig, B.3
-
133
-
-
0007285494
-
Volume changes in protein reactions. I. Ionization reactions of proteins
-
Rasper J, Kauzmarm W. 1962. Volume changes in protein reactions. I. Ionization reactions of proteins. J. Am. Chem. Soc. 84:1771-77
-
(1962)
J. Am. Chem. Soc.
, vol.84
, pp. 1771-1777
-
-
Rasper, J.1
Kauzmarm, W.2
-
134
-
-
0017429069
-
Areas, volumes, packing, and protein structure
-
Richards FM. 1977. Areas, volumes, packing, and protein structure. Annu. Rev. Biophys. Bioeng. 6:151-76
-
(1977)
Annu. Rev. Biophys. Bioeng.
, vol.6
, pp. 151-176
-
-
Richards, F.M.1
-
135
-
-
0022328790
-
Calculation of molecular volumes and areas for structures of known geometry
-
Richards FM. 1985. Calculation of molecular volumes and areas for structures of known geometry. Methods Enzymol. 115:440-64
-
(1985)
Methods Enzymol.
, vol.115
, pp. 440-464
-
-
Richards, F.M.1
-
136
-
-
0001775540
-
Folded and unfolded proteins - An introduction
-
ed. TE Creighton. New York: Freeman
-
Richards FM. 1992. Folded and unfolded proteins - an introduction. In Protein Folding, ed. TE Creighton, pp. 1-58. New York: Freeman
-
(1992)
Protein Folding
, pp. 1-58
-
-
Richards, F.M.1
-
137
-
-
0027815614
-
An analysis of packing in the protein folding problem
-
Richards FM, Lim WA. 1994. An analysis of packing in the protein folding problem. Q. Rev. Biophys. 26:423-98
-
(1994)
Q. Rev. Biophys.
, vol.26
, pp. 423-498
-
-
Richards, F.M.1
Lim, W.A.2
-
138
-
-
0029144073
-
Hydrostatic and osmotic pressure as tools to study macromolecular recognition
-
Robinson CR, Sligar SG. 1995. Hydrostatic and osmotic pressure as tools to study macromolecular recognition. Methods Enzymol. 259:395-427
-
(1995)
Methods Enzymol.
, vol.259
, pp. 395-427
-
-
Robinson, C.R.1
Sligar, S.G.2
-
139
-
-
0032478266
-
Changes in solvation during DNA binding and cleavage are critical to altered specificity of the EcoRI endonuclease
-
Robinson CR, Sligar SG. 1998. Changes in solvation during DNA binding and cleavage are critical to altered specificity of the EcoRI endonuclease. Proc. Natl. Acad. Sci. USA 95:2186-91
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 2186-2191
-
-
Robinson, C.R.1
Sligar, S.G.2
-
140
-
-
0029149109
-
Application of pressure to biochemical equilibria: The other thermodynamic variable
-
Royer CA. 1995. Application of pressure to biochemical equilibria: the other thermodynamic variable. Methods Enzymol. 259:357-77
-
(1995)
Methods Enzymol.
, vol.259
, pp. 357-377
-
-
Royer, C.A.1
-
141
-
-
0037171140
-
Revisiting volume changes in pressure-induced protein unfolding
-
Royer CA. 2002. Revisiting volume changes in pressure-induced protein unfolding. Biochim. Biophys. Acta 1595:201-9
-
(2002)
Biochim. Biophys. Acta
, vol.1595
, pp. 201-209
-
-
Royer, C.A.1
-
143
-
-
0020156572
-
Development of methods of precise ultrasonic measurements in small volumes of liquids
-
Sarvazyan AP. 1982. Development of methods of precise ultrasonic measurements in small volumes of liquids. Ultrasonics 20:151-54
-
(1982)
Ultrasonics
, vol.20
, pp. 151-154
-
-
Sarvazyan, A.P.1
-
144
-
-
0008826543
-
Ultrasonic velocimetry of biological compounds
-
Sarvazyan AP. 1983. Ultrasonic velocimetry of biological compounds. Mol. Biol. 17:916-27
-
(1983)
Mol. Biol.
, vol.17
, pp. 916-927
-
-
Sarvazyan, A.P.1
-
145
-
-
0025855018
-
Ultrasonic velocimetry of biological compounds
-
Sarvazyan AP. 1991. Ultrasonic velocimetry of biological compounds. Ann. Rev. Biophys. Biophys. Chem. 20:321-42
-
(1991)
Ann. Rev. Biophys. Biophys. Chem.
, vol.20
, pp. 321-342
-
-
Sarvazyan, A.P.1
-
146
-
-
84985713724
-
Relaxational contributions to protein compressibility from ultrasonic data
-
Sarvazyan AP, Hemmes P. 1979. Relaxational contributions to protein compressibility from ultrasonic data. Biopolymers 18:3015-24
-
(1979)
Biopolymers
, vol.18
, pp. 3015-3024
-
-
Sarvazyan, A.P.1
Hemmes, P.2
-
147
-
-
0035815110
-
Volume, expansivity, and isothermal compressibility changes associated with temperature and pressure unfolding of staphylococcal nuclease
-
Seemann H, Winter R, Royer CA. 2001. Volume, expansivity, and isothermal compressibility changes associated with temperature and pressure unfolding of staphylococcal nuclease. J. Mol. Biol. 307:1091-102
-
(2001)
J. Mol. Biol.
, vol.307
, pp. 1091-1102
-
-
Seemann, H.1
Winter, R.2
Royer, C.A.3
-
148
-
-
0035919635
-
Persistence of native-like topology in a denatured protein in 8 M urea
-
Shortle D, Ackerman MS. 2001. Persistence of native-like topology in a denatured protein in 8 M urea. Science 293:487-89
-
(2001)
Science
, vol.293
, pp. 487-489
-
-
Shortle, D.1
Ackerman, M.S.2
-
149
-
-
0035919819
-
Linkage of EcoRI dissociation from its specific DNA recognition site to water activity, salt concentration, and pH: Separating their roles in specific and non-specific binding
-
Sidorova NY, Rau DC. 2001. Linkage of EcoRI dissociation from its specific DNA recognition site to water activity, salt concentration, and pH: separating their roles in specific and non-specific binding. J. Mol. Biol. 310:801-16
-
(2001)
J. Mol. Biol.
, vol.310
, pp. 801-816
-
-
Sidorova, N.Y.1
Rau, D.C.2
-
150
-
-
0035478292
-
Pressure provides new insights into protein folding, dynamics, and structure
-
Silva JL, Foguel D, Royer CA. 2001. Pressure provides new insights into protein folding, dynamics, and structure. Trends Biochem. Sci. 26:612-18
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 612-618
-
-
Silva, J.L.1
Foguel, D.2
Royer, C.A.3
-
152
-
-
0036220998
-
The enzyme horseradish peroxidase is less compressible at high pressures
-
Smeller L, Fidy J. 2002. The enzyme horseradish peroxidase is less compressible at high pressures. Biophys. J. 82:426-36
-
(2002)
Biophys. J.
, vol.82
, pp. 426-436
-
-
Smeller, L.1
Fidy, J.2
-
153
-
-
34250434907
-
Structure in aqueous solutions of nonpolar solutes from the standpoint of scaled-particle theory
-
Stillinger FH. 1973. Structure in aqueous solutions of nonpolar solutes from the standpoint of scaled-particle theory. J. Solut. Chem. 2:141-58
-
(1973)
J. Solut. Chem.
, vol.2
, pp. 141-158
-
-
Stillinger, F.H.1
-
154
-
-
0000372879
-
Protein-protein interactions: Interface structure, binding thermodynamics, and mutational analysis
-
Stites WE. 1997. Protein-protein interactions: interface structure, binding thermodynamics, and mutational analysis. Chem. Rev. 97:1233-50
-
(1997)
Chem. Rev.
, vol.97
, pp. 1233-1250
-
-
Stites, W.E.1
-
155
-
-
0032478214
-
Protein hydration in solution: Experimental observation by X-ray and neutron scattering
-
Svergun DI, Richard S, Koch MHJ, Sayers Z, Kuprin S, Zaccai G. 1998. Protein hydration in solution: experimental observation by X-ray and neutron scattering. Proc. Natl. Acad. Sci. USA 95:2267-72
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 2267-2272
-
-
Svergun, D.I.1
Richard, S.2
Koch, M.H.J.3
Sayers, Z.4
Kuprin, S.5
Zaccai, G.6
-
156
-
-
0030783569
-
Molecular and biological constraints on ligand-binding affinity and specificity
-
Szwajkajzer D, Carey J. 1997. Molecular and biological constraints on ligand-binding affinity and specificity. Biopolymers 44:181-98
-
(1997)
Biopolymers
, vol.44
, pp. 181-198
-
-
Szwajkajzer, D.1
Carey, J.2
-
157
-
-
0033636872
-
Molecular dynamics simulation shows large volume fluctuations of proteins
-
Tama F, Myashita O, Kitao A, Go N. 2000. Molecular dynamics simulation shows large volume fluctuations of proteins. Eur. Biophys. J. 29:472-80
-
(2000)
Eur. Biophys. J.
, vol.29
, pp. 472-480
-
-
Tama, F.1
Myashita, O.2
Kitao, A.3
Go, N.4
-
158
-
-
0028925816
-
Compactness of thermally and chemically denatured ribonuclease A as revealed by volume and compressibility
-
Tamura Y, Gekko K. 1995. Compactness of thermally and chemically denatured ribonuclease A as revealed by volume and compressibility. Biochemistry 34:1878-84
-
(1995)
Biochemistry
, vol.34
, pp. 1878-1884
-
-
Tamura, Y.1
Gekko, K.2
-
159
-
-
0027517403
-
Adiabatic compressibility of myosin subfragment-1 and heavy meromyosin with and without nucleotide
-
Tamura Y, Suzuki N, Mihashi K. 1993. Adiabatic compressibility of myosin subfragment-1 and heavy meromyosin with and without nucleotide. Biophys. J. 65:1899-905
-
(1993)
Biophys. J.
, vol.65
, pp. 1899-1905
-
-
Tamura, Y.1
Suzuki, N.2
Mihashi, K.3
-
160
-
-
0342325481
-
Pressure inactivation of α-chymotrypsin
-
Taniguchi Y, Suzuki K. 1983. Pressure inactivation of α-chymotrypsin. J. Phys. Chem. 87:5185-93
-
(1983)
J. Phys. Chem.
, vol.87
, pp. 5185-5193
-
-
Taniguchi, Y.1
Suzuki, K.2
-
161
-
-
0035824880
-
Characterization of pH-induced transitions of β-lactoglobulin: Ultrasonic, densimetric, and spectroscopic studies
-
Taulier N, Chalikian TV. 2001. Characterization of pH-induced transitions of β-lactoglobulin: ultrasonic, densimetric, and spectroscopic studies. J. Mol. Biol. 314:873-89
-
(2001)
J. Mol. Biol.
, vol.314
, pp. 873-889
-
-
Taulier, N.1
Chalikian, T.V.2
-
163
-
-
0026606219
-
Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K
-
Tilton RF, Dewan JC, Petsko GA. 1992. Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K. Biochemistry 31:2469-81
-
(1992)
Biochemistry
, vol.31
, pp. 2469-2481
-
-
Tilton, R.F.1
Dewan, J.C.2
Petsko, G.A.3
-
164
-
-
0036128797
-
Natively unfolded proteins: A point where biology waits for physics
-
Uversky VN. 2002. Natively unfolded proteins: a point where biology waits for physics. Protein Sci. 11:739-56
-
(2002)
Protein Sci.
, vol.11
, pp. 739-756
-
-
Uversky, V.N.1
-
165
-
-
0036153571
-
What does it mean to be natively unfolded?
-
Uversky VN. 2002. What does it mean to be natively unfolded? Eur. J. Biochem. 269:2-12
-
(2002)
Eur. J. Biochem.
, vol.269
, pp. 2-12
-
-
Uversky, V.N.1
-
166
-
-
0034669882
-
Why are "natively unfolded" proteins unstructured under physiologic conditions?
-
Uversky VN, Gillespie JR, Fink AL. 2000. Why are "natively unfolded" proteins unstructured under physiologic conditions? Proteins Struct. Funct. Genet. 41:415-27
-
(2000)
Proteins Struct. Funct. Genet.
, vol.41
, pp. 415-427
-
-
Uversky, V.N.1
Gillespie, J.R.2
Fink, A.L.3
-
167
-
-
0031714899
-
The protein state of matter
-
Vanderkooi JM. 1998. The protein state of matter. Biochim. Biophys. Acta 1386:241-53
-
(1998)
Biochim. Biophys. Acta
, vol.1386
, pp. 241-253
-
-
Vanderkooi, J.M.1
-
168
-
-
0035910479
-
The key to solving the protein-folding problem lies in an accurate description of the denatured state
-
Van Gunsteren WF, Bürgi R, Peter C, Daura X. 2001. The key to solving the protein-folding problem lies in an accurate description of the denatured state. Angew. Chem. Int. Ed. 40:352-55
-
(2001)
Angew. Chem. Int. Ed.
, vol.40
, pp. 352-355
-
-
Van Gunsteren, W.F.1
Bürgi, R.2
Peter, C.3
Daura, X.4
-
169
-
-
0031837399
-
Determination of the volume changes for pressure-induced transitions of apomyoglobin between the native, molten globule, and unfolded states
-
Vidugiris GJA, Royer CA. 1998. Determination of the volume changes for pressure-induced transitions of apomyoglobin between the native, molten globule, and unfolded states. Biophys. J. 75:463-70
-
(1998)
Biophys. J.
, vol.75
, pp. 463-470
-
-
Vidugiris, G.J.A.1
Royer, C.A.2
-
170
-
-
0000109395
-
Thermodynamics of the association and the pressure dissociation of oligomeric proteins
-
Weber G. 1993. Thermodynamics of the association and the pressure dissociation of oligomeric proteins. J. Phys. Chem. 97:7108-15
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 7108-7115
-
-
Weber, G.1
-
171
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
Wright PE, Dyson HJ. 1999. Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm. J. Mol. Biol. 293:321-31
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
172
-
-
0015498124
-
Apparent molal volume of glycine, glycolamide, alanine, lactamide, and glycylglycine in aqueous solution at 25°C and high pressures
-
Yayanos AA. 1972. Apparent molal volume of glycine, glycolamide, alanine, lactamide, and glycylglycine in aqueous solution at 25°C and high pressures. J. Phys. Chem. 76:1783-92
-
(1972)
J. Phys. Chem.
, vol.76
, pp. 1783-1792
-
-
Yayanos, A.A.1
-
173
-
-
0028013478
-
Thermal expansion of hen eggwhite lysozyme. Comparison of the 1.9 Å resolution structures of the tetragonal form of the enzyme at 100 K and 298 K
-
Young ACM, Tilton RF, Dewan JC. 1994. Thermal expansion of hen eggwhite lysozyme. Comparison of the 1.9 Å resolution structures of the tetragonal form of the enzyme at 100 K and 298 K. J. Mol. Biol. 235:302-17
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 302-317
-
-
Young, A.C.M.1
Tilton, R.F.2
Dewan, J.C.3
-
174
-
-
0021195067
-
Amino acid, peptide, and protein volume in solution
-
Zamyatnin AA. 1984. Amino acid, peptide, and protein volume in solution. Annu. Rev. Biophys. Bioeng. 13:145-65
-
(1984)
Annu. Rev. Biophys. Bioeng.
, vol.13
, pp. 145-165
-
-
Zamyatnin, A.A.1
-
175
-
-
33847089407
-
On the volume changes upon protonation of n-alkylcarboxylate ions and n-alkylamines in aqueous solutions. Extension to the interpretation of volumic effects observed in solutions of molecular ions, polyelectrolytes, micellar detergents, and proteins
-
Zana R. 1977. On the volume changes upon protonation of n-alkylcarboxylate ions and n-alkylamines in aqueous solutions. Extension to the interpretation of volumic effects observed in solutions of molecular ions, polyelectrolytes, micellar detergents, and proteins. J. Phys. Chem. 81:1817-22
-
(1977)
J. Phys. Chem.
, vol.81
, pp. 1817-1822
-
-
Zana, R.1
-
176
-
-
0015820466
-
Pressure denaturation of metmyoglobin
-
Zipp A, Kauzmann W. 1973. Pressure denaturation of metmyoglobin. Biochemistry 12:4217-28
-
(1973)
Biochemistry
, vol.12
, pp. 4217-4228
-
-
Zipp, A.1
Kauzmann, W.2
-
177
-
-
0001669980
-
Photochemical holes under pressure: Compressibility and volume fluctuations of a protein
-
Zollfrank J, Friedrich J, Fidy J, Vanderkooi JM. 1991. Photochemical holes under pressure: compressibility and volume fluctuations of a protein. J. Chem. Phys. 94:8600-3
-
(1991)
J. Chem. Phys.
, vol.94
, pp. 8600-8603
-
-
Zollfrank, J.1
Friedrich, J.2
Fidy, J.3
Vanderkooi, J.M.4
|