-
1
-
-
31444444162
-
Integration of oxygen signaling at the consensus HRE
-
Wenger, R. H., Stiehl, D. P. and Camenisch, G. (2005) Integration of oxygen signaling at the consensus HRE. Sci. STKE 306, re12
-
(2005)
Sci. STKE
, vol.306
-
-
Wenger, R.H.1
Stiehl, D.P.2
Camenisch, G.3
-
3
-
-
0035917313
-
2 sensing
-
2 sensing. Science 292, 464-468
-
(2001)
Science
, vol.292
, pp. 464-468
-
-
Ivan, M.1
Kondo, K.2
Yang, H.3
Kim, W.4
Valiando, J.5
Ohh, M.6
Salic, A.7
Asara, J.M.8
Lane, W.S.9
Kaelin Jr, W.G.10
-
4
-
-
0035917808
-
2-regulated prolyl hydroxylation
-
2-regulated prolyl hydroxylation. Science 292, 468-472
-
(2001)
Science
, vol.292
, pp. 468-472
-
-
Jaakkola, P.1
Mole, D.R.2
Tian, Y.M.3
Wilson, M.I.4
Gielbert, J.5
Gaskell, S.J.6
Kriegsheim, A.7
Hebestreit, H.F.8
Mukherji, M.9
Schofield, C.J.10
-
5
-
-
17944375360
-
-
Epstein, A. C., Gleadle, J. M., McNeill, L. A., Hewitson, K. S., O'Rourke, J., Mole, D. R., Mukherji, M., Metzen, E., Wilson, M. I., Dhanda, A. et al. (2001) C. elegans EGL-9 and mammalian homologs define a family of dioxygenases that regulate HIF by prolyl hydroxylation. Cell 107, 43-54
-
Epstein, A. C., Gleadle, J. M., McNeill, L. A., Hewitson, K. S., O'Rourke, J., Mole, D. R., Mukherji, M., Metzen, E., Wilson, M. I., Dhanda, A. et al. (2001) C. elegans EGL-9 and mammalian homologs define a family of dioxygenases that regulate HIF by prolyl hydroxylation. Cell 107, 43-54
-
-
-
-
6
-
-
0035834409
-
A conserved family of prolyl-4-hydroxylases that modify HIF
-
Bruick, R. K. and McKnight, S. L. (2001) A conserved family of prolyl-4-hydroxylases that modify HIF. Science 294, 1337-1340
-
(2001)
Science
, vol.294
, pp. 1337-1340
-
-
Bruick, R.K.1
McKnight, S.L.2
-
7
-
-
0037108807
-
Biochemical purification and pharmacological inhibition of a mammalian prolyl hydroxylase acting on hypoxia-inducible factor
-
Ivan, M., Haberberger, T., Gervasi, D. C., Michelson, K. S., Gunzler, V., Kondo, K., Yang, H., Sorokina, I., Conaway, R. C., Conaway, J. W. and Kaelin, Jr, W. G. (2002) Biochemical purification and pharmacological inhibition of a mammalian prolyl hydroxylase acting on hypoxia-inducible factor. Proc. Natl. Acad. Sci. U.S.A. 99, 13459-13464
-
(2002)
Proc. Natl. Acad. Sci. U.S.A
, vol.99
, pp. 13459-13464
-
-
Ivan, M.1
Haberberger, T.2
Gervasi, D.C.3
Michelson, K.S.4
Gunzler, V.5
Kondo, K.6
Yang, H.7
Sorokina, I.8
Conaway, R.C.9
Conaway, J.W.10
Kaelin Jr, W.G.11
-
8
-
-
0035812318
-
Characterization and comparative analysis of the EGLN gene family
-
Taylor, M. S. (2001) Characterization and comparative analysis of the EGLN gene family. Gene 275, 125-132
-
(2001)
Gene
, vol.275
, pp. 125-132
-
-
Taylor, M.S.1
-
9
-
-
0033587146
-
The tumour suppressor protein VHL targets hypoxia-inducible factors for oxygen-dependent proteolysis
-
Maxwell, P. H., Wiesener, M. S., Chang, G. W., Clifford, S. C., Vaux, E. C., Cockman, M. E., Wykoff, C. C., Pugh, C. W., Maher, E. R. and Ratcliffe, P. J. (1999) The tumour suppressor protein VHL targets hypoxia-inducible factors for oxygen-dependent proteolysis. Nature 399, 271-275
-
(1999)
Nature
, vol.399
, pp. 271-275
-
-
Maxwell, P.H.1
Wiesener, M.S.2
Chang, G.W.3
Clifford, S.C.4
Vaux, E.C.5
Cockman, M.E.6
Wykoff, C.C.7
Pugh, C.W.8
Maher, E.R.9
Ratcliffe, P.J.10
-
10
-
-
0043234538
-
Characterization of the human prolyl 4-hydroxylases that modify the hypoxia-inducible factor HIF
-
Hirsilä, M., Koivunen, P., Günzler, V., Kivirikko, K. I. and Myllyharju, J. (2003) Characterization of the human prolyl 4-hydroxylases that modify the hypoxia-inducible factor HIF. J. Biol. Chem. 278, 30772-30780
-
(2003)
J. Biol. Chem
, vol.278
, pp. 30772-30780
-
-
Hirsilä, M.1
Koivunen, P.2
Günzler, V.3
Kivirikko, K.I.4
Myllyharju, J.5
-
11
-
-
33749410367
-
The length of peptide substrates has a marked effect on hydroxylation by the HIF prolyl 4-hydroxylases
-
Koivunen, P., Hirsila, M., Kivirikko, K. I. and Myllyharju, J. (2006) The length of peptide substrates has a marked effect on hydroxylation by the HIF prolyl 4-hydroxylases. J. Biol. Chem. 281, 28712-28720
-
(2006)
J. Biol. Chem
, vol.281
, pp. 28712-28720
-
-
Koivunen, P.1
Hirsila, M.2
Kivirikko, K.I.3
Myllyharju, J.4
-
12
-
-
0035903468
-
Independent function of two destruction domains in hypoxia-inducible factor-α chains activated by prolyl hydroxylation
-
Masson, N., Willam, C., Maxwell, P. H., Pugh, C. W. and Ratcliffe, P. J. (2001) Independent function of two destruction domains in hypoxia-inducible factor-α chains activated by prolyl hydroxylation. EMBO J. 20, 5197-5206
-
(2001)
EMBO J
, vol.20
, pp. 5197-5206
-
-
Masson, N.1
Willam, C.2
Maxwell, P.H.3
Pugh, C.W.4
Ratcliffe, P.J.5
-
13
-
-
0037131159
-
Seguence determinants in hypoxia-inducible factor-1α for hydroxylation by the prolyl hydroxylases PHD1, PHD2, and PHD3
-
Huang, J., Zhao, Q., Mooney, S. M. and Lee, F. S. (2002) Seguence determinants in hypoxia-inducible factor-1α for hydroxylation by the prolyl hydroxylases PHD1, PHD2, and PHD3. J. Biol. Chem. 277, 39792-39800
-
(2002)
J. Biol. Chem
, vol.277
, pp. 39792-39800
-
-
Huang, J.1
Zhao, Q.2
Mooney, S.M.3
Lee, F.S.4
-
14
-
-
11244279649
-
Many amino acid substitutions in a HIF-1α-like peptide cause only minor changes in its hydroxylation by the HIF prolyl 4-hydroxylases: Substitution of 3,4-dehydroproline or azetidine-2-carboxylic acid for the proline leads to a high rate of uncoupled 2-oxoglutarate decarboxylation
-
Li, D., Hirsila, M., Koivunen, P., Brenner, M. C., Xu, L., Yang, C., Kivirikko, K. I. and Myllyharju, J. (2004) Many amino acid substitutions in a HIF-1α-like peptide cause only minor changes in its hydroxylation by the HIF prolyl 4-hydroxylases: substitution of 3,4-dehydroproline or azetidine-2-carboxylic acid for the proline leads to a high rate of uncoupled 2-oxoglutarate decarboxylation. J. Biol. Chem. 279, 55051-55059
-
(2004)
J. Biol. Chem
, vol.279
, pp. 55051-55059
-
-
Li, D.1
Hirsila, M.2
Koivunen, P.3
Brenner, M.C.4
Xu, L.5
Yang, C.6
Kivirikko, K.I.7
Myllyharju, J.8
-
15
-
-
4644318828
-
Differential function of the prolyl hydroxylases PHD1, PHD2 and PHD3 in the regulation of the hypoxia inducible factor
-
Appelhoff, R. J., Tian, Y.-M., Raval, R. R., Turley, H., Harris, A. L., Pugh, C. W., Ratcliffe, P. J. and Gleadle, J. M. (2004) Differential function of the prolyl hydroxylases PHD1, PHD2 and PHD3 in the regulation of the hypoxia inducible factor. J. Biol. Chem. 279, 38458-38465
-
(2004)
J. Biol. Chem
, vol.279
, pp. 38458-38465
-
-
Appelhoff, R.J.1
Tian, Y.-M.2
Raval, R.R.3
Turley, H.4
Harris, A.L.5
Pugh, C.W.6
Ratcliffe, P.J.7
Gleadle, J.M.8
-
16
-
-
33750523633
-
Analysis of HIF-prolyl hydroxylases binding to substrates
-
Landazuri, M. O., Vara-Vega, A., Viton, M., Cuevas, Y. and del Peso, L. (2006) Analysis of HIF-prolyl hydroxylases binding to substrates. Biochem. Biophys. Res. Commun. 351, 313-320
-
(2006)
Biochem. Biophys. Res. Commun
, vol.351
, pp. 313-320
-
-
Landazuri, M.O.1
Vara-Vega, A.2
Viton, M.3
Cuevas, Y.4
del Peso, L.5
-
17
-
-
0026562884
-
Improved method for high efficiency transformation of intact yeast cells
-
Gietz, D., St Jean, A., Woods, R. A. and Schiestl, R. H. (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acid Res. 20, 1425
-
(1992)
Nucleic Acid Res
, vol.20
, pp. 1425
-
-
Gietz, D.1
St Jean, A.2
Woods, R.A.3
Schiestl, R.H.4
-
18
-
-
0035971220
-
Evidence for the involvement of diacylglycerol kinase in the activation of hypoxia-inducible transcription factor 1 by low oxygen tension
-
Aragones, J., Jones, D. R., Martin, S., San Juan, M. A., Alfranca, A., Vidal, F., Vara, A., Merida, I. and Landazuri, M. O. (2001) Evidence for the involvement of diacylglycerol kinase in the activation of hypoxia-inducible transcription factor 1 by low oxygen tension. J. Biol. Chem. 276, 10548-10555
-
(2001)
J. Biol. Chem
, vol.276
, pp. 10548-10555
-
-
Aragones, J.1
Jones, D.R.2
Martin, S.3
San Juan, M.A.4
Alfranca, A.5
Vidal, F.6
Vara, A.7
Merida, I.8
Landazuri, M.O.9
-
19
-
-
0023392945
-
High-efficiency transformation of mammalian cell by plasmid DNA
-
Chen, C. and Okayama, H. (1987) High-efficiency transformation of mammalian cell by plasmid DNA. Mol. Cell. Biol. 7, 2745-2752
-
(1987)
Mol. Cell. Biol
, vol.7
, pp. 2745-2752
-
-
Chen, C.1
Okayama, H.2
-
20
-
-
22544464403
-
Coordinate regulation of the oxygen-dependent degradation domains of hypoxia inducible factor 1α
-
Chan, D. A., Sutphin, P. D., Yen, S.-E. and Giaccia, A. J. (2005) Coordinate regulation of the oxygen-dependent degradation domains of hypoxia inducible factor 1α. Mol. Cell. Biol. 25, 6415-6426
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 6415-6426
-
-
Chan, D.A.1
Sutphin, P.D.2
Yen, S.-E.3
Giaccia, A.J.4
-
21
-
-
33745614894
-
Cellular oxygen sensing: Crystal structure of hypoxia-inducible factor prolyl hydroxylase (PHD2)
-
McDonough, M. A., Li, V., Flashman, E., Chowdhury, R., Mohr, C., Lienard, B. M. R., Zondlo, J., Oldham, N. J., Clifton, I. J., Lewis, J. et al. (2006) Cellular oxygen sensing: crystal structure of hypoxia-inducible factor prolyl hydroxylase (PHD2). Proc. Natl. Acad. Sci. U.S.A. 103, 9814-9819
-
(2006)
Proc. Natl. Acad. Sci. U.S.A
, vol.103
, pp. 9814-9819
-
-
McDonough, M.A.1
Li, V.2
Flashman, E.3
Chowdhury, R.4
Mohr, C.5
Lienard, B.M.R.6
Zondlo, J.7
Oldham, N.J.8
Clifton, I.J.9
Lewis, J.10
-
22
-
-
0035812694
-
Protein structure prediction and structural genomics
-
Baker, D. and Sali, A. (2001) Protein structure prediction and structural genomics. Science 294, 93-96
-
(2001)
Science
, vol.294
, pp. 93-96
-
-
Baker, D.1
Sali, A.2
-
23
-
-
19644376763
-
The candidate tumor suppressor ING4 represses activation of the hypoxia inducible factor (HIF)
-
Ozer, A., Wu, L. C. and Bruick, R. K. (2005) The candidate tumor suppressor ING4 represses activation of the hypoxia inducible factor (HIF). Proc. Natl. Acad. Sci. U.S.A. 102, 7481-7486
-
(2005)
Proc. Natl. Acad. Sci. U.S.A
, vol.102
, pp. 7481-7486
-
-
Ozer, A.1
Wu, L.C.2
Bruick, R.K.3
-
24
-
-
27844577728
-
Suppression of hypoxia-inducible factor 1α (HIF-1α) transcriptional activity by the HIF prolyl hydroxylase EGLN1
-
To, K. K. W. and Huang, L. E. (2005) Suppression of hypoxia-inducible factor 1α (HIF-1α) transcriptional activity by the HIF prolyl hydroxylase EGLN1. J. Biol. Chem. 280, 38102-38107
-
(2005)
J. Biol. Chem
, vol.280
, pp. 38102-38107
-
-
To, K.K.W.1
Huang, L.E.2
-
25
-
-
33751330425
-
The Caenorhabditis elegans rhy-1 gene inhibits HIF-1 hypoxia-inducible factor activity in a negative feedback loop that does not include vhl-1
-
Shen, C., Shao, Z. and Powell-Coffman, J. A. (2006) The Caenorhabditis elegans rhy-1 gene inhibits HIF-1 hypoxia-inducible factor activity in a negative feedback loop that does not include vhl-1. Genetics 174, 1205-1214
-
(2006)
Genetics
, vol.174
, pp. 1205-1214
-
-
Shen, C.1
Shao, Z.2
Powell-Coffman, J.A.3
-
26
-
-
27844605466
-
Inhibition of the catalytic activity of hypoxia-inducible factor-1α prolyl-hydroxylase 2 by a MYND-type zinc finger
-
Choi, K.-O., Lee, T., Lee, N., Kim, J.-H., Yang, E. G., Yoon, J. M., Kim, J. H., Lee, T. G. and Park, H. (2005) Inhibition of the catalytic activity of hypoxia-inducible factor-1α prolyl-hydroxylase 2 by a MYND-type zinc finger. Mol. Pharmacol. 68, 1803-1809
-
(2005)
Mol. Pharmacol
, vol.68
, pp. 1803-1809
-
-
Choi, K.-O.1
Lee, T.2
Lee, N.3
Kim, J.-H.4
Yang, E.G.5
Yoon, J.M.6
Kim, J.H.7
Lee, T.G.8
Park, H.9
-
27
-
-
0038825680
-
2-Oxoglutarate analogue inhibitors of HIF prolyl hydroxylase
-
Mole, D. R., Schlemminger, I., McNeill, L. A., Hewitson, K. S., Pugh, C. W., Ratcliffe, P. J. and Schofield, C. J. (2003) 2-Oxoglutarate analogue inhibitors of HIF prolyl hydroxylase. Bioorg. Med. Chem. Lett. 13, 2677-2680
-
(2003)
Bioorg. Med. Chem. Lett
, vol.13
, pp. 2677-2680
-
-
Mole, D.R.1
Schlemminger, I.2
McNeill, L.A.3
Hewitson, K.S.4
Pugh, C.W.5
Ratcliffe, P.J.6
Schofield, C.J.7
-
28
-
-
0038380470
-
Activation of the hypoxia-inducible factor pathway and stimulation of angiogenesis by application of prolyl hydroxylase inhibitors
-
Warnecke, C., Griethe, W., Weidemann, A., Jürgensen, J. S., Willam, C., Bachmann, S., Ivashchenko, Y., Wagner, I., Frei, U., Wiesener, M. and Eckardt, K.-U. (2003) Activation of the hypoxia-inducible factor pathway and stimulation of angiogenesis by application of prolyl hydroxylase inhibitors. FASEB J. 17, 1186-1188
-
(2003)
FASEB J
, vol.17
, pp. 1186-1188
-
-
Warnecke, C.1
Griethe, W.2
Weidemann, A.3
Jürgensen, J.S.4
Willam, C.5
Bachmann, S.6
Ivashchenko, Y.7
Wagner, I.8
Frei, U.9
Wiesener, M.10
Eckardt, K.-U.11
-
29
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., Gish, W., Miller, W., Meyers, E. W. and Lipman, D. J. (1990) Basic local alignment search tool. J. Mol. Biol. 215, 403-410
-
(1990)
J. Mol. Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Meyers, E.W.4
Lipman, D.J.5
|