-
1
-
-
12344262805
-
A computational search for box C/D snoRNA genes in the D. melanogaster genome
-
Accardo MC et al (2004) A computational search for box C/D snoRNA genes in the D. melanogaster genome. Bioinformatics 20:3293-3301
-
(2004)
Bioinformatics
, vol.20
, pp. 3293-3301
-
-
Accardo, M.C.1
-
2
-
-
0034708480
-
The genome sequence of Drosophila melanogaster
-
Adams MD et al (2000) The genome sequence of Drosophila melanogaster. Science 287:2185-2195
-
(2000)
Science
, vol.287
, pp. 2185-2195
-
-
Adams, M.D.1
-
3
-
-
0033567131
-
The yeast exosome and human PM-Scl are related complexes of 3′ → 5′ exonucleases
-
Allmang C, Petfalski E, Podtelejnikov A, Mann M, Tollervey D, Mitchell P (1999) The yeast exosome and human PM-Scl are related complexes of 3′ → 5′ exonucleases. Genes Dev 13:2148-2158
-
(1999)
Genes Dev
, vol.13
, pp. 2148-2158
-
-
Allmang, C.1
Petfalski, E.2
Podtelejnikov, A.3
Mann, M.4
Tollervey, D.5
Mitchell, P.6
-
4
-
-
3142726606
-
Identification of microRNAs and other tiny noncoding RNAs by cDNA clothing
-
In: Gott JM (ed) Human Press, Totowa
-
Ambros V, Lee RC (2004) Identification of microRNAs and other tiny noncoding RNAs by cDNA clothing. In: Gott JM (ed) RNA interferance, editing, and modification. Human Press, Totowa, pp 131-158
-
(2004)
RNA Interferance, Editing, and Modification
, pp. 131-158
-
-
Ambros, V.1
Lee, R.C.2
-
5
-
-
0037737975
-
MicroRNAs and other tiny endogenous RNAs in C. elegans
-
Ambros V, Lee RC, Lavanway A, Williams PT, Jewell D (2003) MicroRNAs and other tiny endogenous RNAs in C. elegans. Curr Biol 13:807-818
-
(2003)
Curr Biol
, vol.13
, pp. 807-818
-
-
Ambros, V.1
Lee, R.C.2
Lavanway, A.3
Williams, P.T.4
Jewell, D.5
-
6
-
-
33644876507
-
The tmRDB and SRPDB resources
-
Andersen ES et al (2006) The tmRDB and SRPDB resources. Nucleic Acids Res 34:D163-D168
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Andersen, E.S.1
-
7
-
-
23944470910
-
RNA turnover: Unexpected consequences of being tailed
-
Anderson JT (2005) RNA turnover: Unexpected consequences of being tailed. Curr Biol 15:R635-638
-
(2005)
Curr Biol
, vol.15
-
-
Anderson, J.T.1
-
8
-
-
26944443861
-
Identification and characterization of small RNAs involved in RNA silencing
-
Aravin A, Tuschl T (2005) Identification and characterization of small RNAs involved in RNA silencing. FEBS Lett 579:5830-5840
-
(2005)
FEBS Lett
, vol.579
, pp. 5830-5840
-
-
Aravin, A.1
Tuschl, T.2
-
9
-
-
33745402414
-
A novel class of small RNAs bind to MILI protein in mouse testes
-
Aravin A et al (2006) A novel class of small RNAs bind to MILI protein in mouse testes. Nature 442:203-207
-
(2006)
Nature
, vol.442
, pp. 203-207
-
-
Aravin, A.1
-
10
-
-
0035058293
-
The endogenous fibroblast growth factor-2 antisense gene product regulates pituitary cell growth and hormone production
-
Asa SL, Ramyar L, Murphy PR, Li AW, Ezzat S (2001) The endogenous fibroblast growth factor-2 antisense gene product regulates pituitary cell growth and hormone production. Mol Endocrinol 15:589-599
-
(2001)
Mol Endocrinol
, vol.15
, pp. 589-599
-
-
Asa, S.L.1
Ramyar, L.2
Murphy, P.R.3
Li, A.W.4
Ezzat, S.5
-
11
-
-
4344560867
-
Novel non-coding RNAs in Dictyostelium discoideum and their expression during development
-
Aspegren A, Hinas A, Larsson P, Larsson A, Söderbom F (2004) Novel non-coding RNAs in Dictyostelium discoideum and their expression during development. Nucleic Acids Res 32:4646-4656
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 4646-4656
-
-
Aspegren, A.1
Hinas, A.2
Larsson, P.3
Larsson, A.4
Söderbom, F.5
-
12
-
-
0029040719
-
Antisense snoRNAs: A family of nucleolar RNAs with long complementarities to rRNA
-
Bachellerie JP, Michot B, Nicoloso M, Balakin A, Ni J, Fournier MJ (1995) Antisense snoRNAs: A family of nucleolar RNAs with long complementarities to rRNA. Trends Biochem Sci 20:261-264
-
(1995)
Trends Biochem Sci
, vol.20
, pp. 261-264
-
-
Bachellerie, J.P.1
Michot, B.2
Nicoloso, M.3
Balakin, A.4
Ni, J.5
Fournier, M.J.6
-
14
-
-
33645538592
-
Chemotaxis: Moving forward and holding on to the past
-
Bagorda A, Mihaylov VA, Parent CA (2006) Chemotaxis: Moving forward and holding on to the past. Thromb Haemost 95:12-21
-
(2006)
Thromb Haemost
, vol.95
, pp. 12-21
-
-
Bagorda, A.1
Mihaylov, V.A.2
Parent, C.A.3
-
15
-
-
0037022379
-
The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba
-
Bapteste E et al (2002) The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba. Proc Natl Acad Sci USA 99:1414-1419
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 1414-1419
-
-
Bapteste, E.1
-
16
-
-
27144541056
-
Elucidating the role of H/ACA-like RNAs in trans-splicing and rRNA processing via RNA interference silencing of the Trypanosoma brucei CBF5 pseudouridine synthase
-
Barth S, Hury A, Liang XH, Michaeli S (2005) Elucidating the role of H/ ACA-like RNAs in trans-splicing and rRNA processing via RNA interference silencing of the Trypanosoma brucei CBF5 pseudouridine synthase. J Biol Chem 280:34558-34568
-
(2005)
J Biol Chem
, vol.280
, pp. 34558-34568
-
-
Barth, S.1
Hury, A.2
Liang, X.H.3
Michaeli, S.4
-
17
-
-
23844550243
-
Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs
-
Baumberger N, Baulcombe DC (2005) Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs. Proc Natl Acad Sci USA 102:11928-11933
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11928-11933
-
-
Baumberger, N.1
Baulcombe, D.C.2
-
18
-
-
0035905766
-
Role for a bidentate ribonuclease in the initiation step of RNA interference
-
Bernstein E, Caudy AA, Hammond SM, Hannon GJ (2001) Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409:363-366
-
(2001)
Nature
, vol.409
, pp. 363-366
-
-
Bernstein, E.1
Caudy, A.A.2
Hammond, S.M.3
Hannon, G.J.4
-
19
-
-
10644237968
-
RNAi-mediated pathways in the nucleus
-
Birchler JA, Matzke MA (2005) RNAi-mediated pathways in the nucleus. Nat Rev Genet 6:24-35
-
(2005)
Nat Rev Genet
, vol.6
, pp. 24-35
-
-
Birchler, J.A.1
Matzke, M.A.2
-
20
-
-
0025189769
-
A model for RNA editing in kinetoplastid mitochondria: "Guide" RNA molecules transcribed from maxicircle DNA provide the edited information
-
Blum B, Bakalara N, Simpson L (1990) A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information. Cell 60:189-198
-
(1990)
Cell
, vol.60
, pp. 189-198
-
-
Blum, B.1
Bakalara, N.2
Simpson, L.3
-
21
-
-
33645582003
-
Aberrant stalk development and breakdown of tip dominance in Dictyostelium cell lines with RNAi-silenced expression of calcineurin B
-
Boeckeler K, Tischendorf G, Mutzel R, Weissenmayer B (2006) Aberrant stalk development and breakdown of tip dominance in Dictyostelium cell lines with RNAi-silenced expression of calcineurin B. BMC Dev Biol 6:12
-
(2006)
BMC Dev Biol
, vol.6
, pp. 12
-
-
Boeckeler, K.1
Tischendorf, G.2
Mutzel, R.3
Weissenmayer, B.4
-
22
-
-
0037264089
-
Plant snoRNAs: Functional evolution and new modes of gene expression
-
Brown JW, Echeverria M, Qu LH (2003) Plant snoRNAs: Functional evolution and new modes of gene expression. Trends Plant Sci 8:42-49
-
(2003)
Trends Plant Sci
, vol.8
, pp. 42-49
-
-
Brown, J.W.1
Echeverria, M.2
Qu, L.H.3
-
23
-
-
0022157359
-
Sequence of Dictyostelium DIRS-1: An apparent retrotransposon with inverted terminal repeats and an internal circle junction sequence
-
Cappello J, Handelsman K, Lodish HF (1985) Sequence of Dictyostelium DIRS-1: An apparent retrotransposon with inverted terminal repeats and an internal circle junction sequence. Cell 43:105-115
-
(1985)
Cell
, vol.43
, pp. 105-115
-
-
Cappello, J.1
Handelsman, K.2
Lodish, H.F.3
-
24
-
-
0036828639
-
The Argonaute family: Tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis
-
Carmell MA, Xuan Z, Zhang MQ, Hannon GJ (2002) The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. Genes Dev. 16:2733
-
(2002)
Genes Dev
, vol.16
, pp. 2733
-
-
Carmell, M.A.1
Xuan, Z.2
Zhang, M.Q.3
Hannon, G.J.4
-
25
-
-
33644857025
-
Gene regulation by microRNAs
-
Carthew RW (2006) Gene regulation by microRNAs. Curr Opin Genet Dev 16:203-208
-
(2006)
Curr Opin Genet Dev
, vol.16
, pp. 203-208
-
-
Carthew, R.W.1
-
26
-
-
0029808113
-
Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides
-
Cavaillé J, Nicoloso M, Bachellerie JP (1996) Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides. Nature 383:732-735
-
(1996)
Nature
, vol.383
, pp. 732-735
-
-
Cavaillé, J.1
Nicoloso, M.2
Bachellerie, J.P.3
-
27
-
-
0034687740
-
Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization
-
Cavaillé J et al (2000) Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. Proc Natl Acad Sci USA 97:14311-14316
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 14311-14316
-
-
Cavaillé, J.1
-
28
-
-
33745951984
-
On the origin and functions of RNA-mediated silencing: From protists to man
-
Cerutti H, Casas-Mollano JA (2006) On the origin and functions of RNA-mediated silencing: From protists to man. Curr Genet 50:81-99
-
(2006)
Curr Genet
, vol.50
, pp. 81-99
-
-
Cerutti, H.1
Casas-Mollano, J.A.2
-
29
-
-
33644874168
-
Dictybase, the model organism database for Dictyostelium discoideum
-
Chisholm RL et al (2006) dictyBase, the model organism database for Dictyostelium discoideum. Nucleic Acids Res 34:D423-427
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Chisholm, R.L.1
-
31
-
-
0035890644
-
Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp
-
Clouet d'Orval B, Bortolin ML, Gaspin C, Bachellerie JP (2001) Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp. Nucleic Acids Res 29:4518-4529
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4518-4529
-
-
Clouet d'Orval, B.1
Bortolin, M.L.2
Gaspin, C.3
Bachellerie, J.P.4
-
32
-
-
0030784958
-
Mechanism and regulation of mRNA polyadenylation
-
Colgan DF, Manley JL (1997) Mechanism and regulation of mRNA polyadenylation. Genes Dev 11:2755-2766
-
(1997)
Genes Dev
, vol.11
, pp. 2755-2766
-
-
Colgan, D.F.1
Manley, J.L.2
-
33
-
-
0022313127
-
Phenocopy of discoidin I-minus mutants by antisense transformation in Dictyostelium
-
Crowley TE, Nellen W, Gomer RH, Firtel RA (1985) Phenocopy of discoidin I-minus mutants by antisense transformation in Dictyostelium. Cell 43:633-641
-
(1985)
Cell
, vol.43
, pp. 633-641
-
-
Crowley, T.E.1
Nellen, W.2
Gomer, R.H.3
Firtel, R.A.4
-
34
-
-
0035989971
-
Sno-capped: 5′ ends of preribosomal RNAs are decorated with a U3 SnoRNP
-
Culver GM (2002) Sno-capped: 5′ ends of preribosomal RNAs are decorated with a U3 SnoRNP. Chem Biol 9:777
-
(2002)
Chem Biol
, vol.9
, pp. 777
-
-
Culver, G.M.1
-
35
-
-
30044435097
-
Organization of the Caenorhabditis elegans small non-coding transcriptome: Genomic features, biogenesis, and expression
-
Deng W et al (2006) Organization of the Caenorhabditis elegans small non-coding transcriptome: Genomic features, biogenesis, and expression. Genome Res 16:20-29
-
(2006)
Genome Res
, vol.16
, pp. 20-29
-
-
Deng, W.1
-
36
-
-
32644435694
-
Degradation of RNA in bacteria: Comparison of mRNA and stable RNA
-
Deutscher MP (2006) Degradation of RNA in bacteria: Comparison of mRNA and stable RNA. Nucleic Acids Res 34:659-666
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 659-666
-
-
Deutscher, M.P.1
-
37
-
-
28044455435
-
Microprimer: The biogenesis and function of microRNA
-
Du T, Zamore PD (2005) Microprimer: The biogenesis and function of microRNA. Development 132:4645-4652
-
(2005)
Development
, vol.132
, pp. 4645-4652
-
-
Du, T.1
Zamore, P.D.2
-
38
-
-
31044452870
-
Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways
-
Duchaine TF et al (2006) Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Cell 124:343-354
-
(2006)
Cell
, vol.124
, pp. 343-354
-
-
Duchaine, T.F.1
-
39
-
-
0037133945
-
Computational genomics of noncoding RNA genes
-
Eddy SR (2002) Computational genomics of noncoding RNA genes. Cell 109:137-140
-
(2002)
Cell
, vol.109
, pp. 137-140
-
-
Eddy, S.R.1
-
41
-
-
18344395923
-
The genome of the social amoeba Dictyostelium discoideum
-
Eichinger L et al (2005) The genome of the social amoeba Dictyostelium discoideum. Nature 435:43-57
-
(2005)
Nature
, vol.435
, pp. 43-57
-
-
Eichinger, L.1
-
42
-
-
0033954323
-
Non-coding, mRNA-like RNAs database Y2K
-
Erdmann VA, Szymanski M, Hochberg A, Groot N, Barciszewski J (2000) Non-coding, mRNA-like RNAs database Y2K. Nucleic Acids Res 28:197-200
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 197-200
-
-
Erdmann, V.A.1
Szymanski, M.2
Hochberg, A.3
Groot, N.4
Barciszewski, J.5
-
43
-
-
0346433692
-
Dictyostelium discoideum developmentally regulated genes whose expression is dependent on MADS box transcription factor SrfA
-
Escalante R, Moreno N, Sastre L (2003) Dictyostelium discoideum developmentally regulated genes whose expression is dependent on MADS box transcription factor SrfA. Eukaryot Cell 2:1327-1335
-
(2003)
Eukaryot Cell
, vol.2
, pp. 1327-1335
-
-
Escalante, R.1
Moreno, N.2
Sastre, L.3
-
44
-
-
33645294070
-
Oncomirs - MicroRNAs with a role in cancer
-
Esquela-Kerscher A, Slack FJ (2006) Oncomirs - MicroRNAs with a role in cancer. Nat Rev Cancer 6:259-269
-
(2006)
Nat Rev Cancer
, vol.6
, pp. 259-269
-
-
Esquela-Kerscher, A.1
Slack, F.J.2
-
45
-
-
33644829758
-
Dictyostelium transcriptional host cell response upon infection with Legionella
-
Farbrother P et al (2006) Dictyostelium transcriptional host cell response upon infection with Legionella. Cellular Microbiol 8:438-456
-
(2006)
Cellular Microbiol
, vol.8
, pp. 438-456
-
-
Farbrother, P.1
-
46
-
-
0032545933
-
Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
-
Fire A, Xu S, Montgomery MK, Kostas SA, Driver SE, Mello CC (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391:806
-
(1998)
Nature
, vol.391
, pp. 806
-
-
Fire, A.1
Xu, S.2
Montgomery, M.K.3
Kostas, S.A.4
Driver, S.E.5
Mello, C.C.6
-
47
-
-
23644443393
-
Genomics: The amazing complexity of the human transcriptome
-
Frith MC, Pheasant M, Mattick JS (2005) Genomics: The amazing complexity of the human transcriptome. Eur J Hum Genet 13:894
-
(2005)
Eur J Hum Genet
, vol.13
, pp. 894
-
-
Frith, M.C.1
Pheasant, M.2
Mattick, J.S.3
-
48
-
-
0030711050
-
Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs
-
Ganot P, Bortolin ML, Kiss T (1997) Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. Cell 89:799-809
-
(1997)
Cell
, vol.89
, pp. 799-809
-
-
Ganot, P.1
Bortolin, M.L.2
Kiss, T.3
-
49
-
-
0344289534
-
Nucleolar factors direct the 2′-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA
-
Ganot P, Jády BE, Bortolin ML, Darzacq X, Kiss T (1999) Nucleolar factors direct the 2′-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA. Mol Cell Biol 19:6906-6917
-
(1999)
Mol Cell Biol
, vol.19
, pp. 6906-6917
-
-
Ganot, P.1
Jády, B.E.2
Bortolin, M.L.3
Darzacq, X.4
Kiss, T.5
-
50
-
-
23944483216
-
Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs
-
Gasciolli V, Mallory AC, Bartel DP, Vaucheret H (2005) Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs. Curr Biol 15:1494-1500
-
(2005)
Curr Biol
, vol.15
, pp. 1494-1500
-
-
Gasciolli, V.1
Mallory, A.C.2
Bartel, D.P.3
Vaucheret, H.4
-
51
-
-
33745336617
-
A germline-specific class of small RNAs binds mammalian Piwi proteins
-
Girard A, Sachidanandam R, Hannon GJ, Carmell MA (2006) A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature 442:199-202
-
(2006)
Nature
, vol.442
, pp. 199-202
-
-
Girard, A.1
Sachidanandam, R.2
Hannon, G.J.3
Carmell, M.A.4
-
52
-
-
10244239321
-
Life with 6000 genes
-
Goffeau A et al (1996) Life with 6000 genes. Science 274:546, 563-547
-
(1996)
Science
, vol.274
, Issue.546
, pp. 547-563
-
-
Goffeau, A.1
-
53
-
-
0032863688
-
Gene identification by shotgun antisense
-
Gomer RH (1999) Gene identification by shotgun antisense. Methods 18:311
-
(1999)
Methods
, vol.18
, pp. 311
-
-
Gomer, R.H.1
-
54
-
-
33748303049
-
Non-coding-RNA regulators of RNA polymerase II transcription
-
Goodrich JA, Kugel JF (2006) Non-coding-RNA regulators of RNA polymerase II transcription. Nat Rev Mol Cell Biol 7:612-616
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 612-616
-
-
Goodrich, J.A.1
Kugel, J.F.2
-
55
-
-
20644462362
-
Micros for microbes: Non-coding regulatory RNAs in bacteria
-
Gottesman S (2005) Micros for microbes: Non-coding regulatory RNAs in bacteria. Trends Genet 21:399-404
-
(2005)
Trends Genet
, vol.21
, pp. 399-404
-
-
Gottesman, S.1
-
56
-
-
0025093878
-
The molecular basis for alternative splicing of the CABP1 transcripts in Dictyostelium discoideum
-
Grant CE, Bain G, Tsang A (1990) The molecular basis for alternative splicing of the CABP1 transcripts in Dictyostelium discoideum. Nucleic Acids Res 18:5457-5463
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 5457-5463
-
-
Grant, C.E.1
Bain, G.2
Tsang, A.3
-
57
-
-
0022555863
-
The role of antisense RNA in gene regulation
-
Green PJ, Pines O, Inouye M (1986) The role of antisense RNA in gene regulation. Ann Rev Biochem 55:569-597
-
(1986)
Ann Rev Biochem
, vol.55
, pp. 569-597
-
-
Green, P.J.1
Pines, O.2
Inouye, M.3
-
58
-
-
13444252847
-
Rfam: Annotating non-coding RNAs in complete genomes
-
(database issue)
-
Griffiths-Jones S, Moxon S, Marshall M, Khanna A, Eddy SR, Bateman A (2005) Rfam: Annotating non-coding RNAs in complete genomes. Nucleic Acids Res 33:D121-D124 (database issue)
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Griffiths-Jones, S.1
Moxon, S.2
Marshall, M.3
Khanna, A.4
Eddy, S.R.5
Bateman, A.6
-
59
-
-
0021013526
-
The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
-
Guerrier-Takada C, Gardiner K, Marsh T, Pace N, Altman S (1983) The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell 35:849-857
-
(1983)
Cell
, vol.35
, pp. 849-857
-
-
Guerrier-Takada, C.1
Gardiner, K.2
Marsh, T.3
Pace, N.4
Altman, S.5
-
60
-
-
13844266603
-
The signal recognition particle and its interactions during protein targeting
-
Halic M, Beckmann R (2005) The signal recognition particle and its interactions during protein targeting. Curr Opin Struct Biol 15:116
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 116
-
-
Halic, M.1
Beckmann, R.2
-
61
-
-
0033615491
-
A species of small antisense RNA in posttranscriptional gene silencing in plants
-
Hamilton AJ, Baulcombe DC (1999) A species of small antisense RNA in posttranscriptional gene silencing in plants. Science 286:950-952
-
(1999)
Science
, vol.286
, pp. 950-952
-
-
Hamilton, A.J.1
Baulcombe, D.C.2
-
62
-
-
0034673638
-
An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells
-
Hammond SM, Bernstein E, Beach D, Hannon GJ (2000) An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells. Nature 404:293-296
-
(2000)
Nature
, vol.404
, pp. 293-296
-
-
Hammond, S.M.1
Bernstein, E.2
Beach, D.3
Hannon, G.J.4
-
63
-
-
0141450351
-
The enigma of ribonuclease P evolution
-
Hartmann E, Hartmann RK (2003) The enigma of ribonuclease P evolution. Trends Genet 19:561
-
(2003)
Trends Genet
, vol.19
, pp. 561
-
-
Hartmann, E.1
Hartmann, R.K.2
-
64
-
-
15244363004
-
SL trans-splicing: Easy come or easy go?
-
Hastings KEM (2005) SL trans-splicing: Easy come or easy go? Trends Genet 21:240-247
-
(2005)
Trends Genet
, vol.21
, pp. 240-247
-
-
Hastings, K.E.M.1
-
65
-
-
24344454298
-
Delving into the diversity of facultative heterochromatin: The epigenetics of the inactive X chromosome
-
Heard E (2005) Delving into the diversity of facultative heterochromatin: The epigenetics of the inactive X chromosome. Curr Opin Genet Dev 15:482
-
(2005)
Curr Opin Genet Dev
, vol.15
, pp. 482
-
-
Heard, E.1
-
66
-
-
0029016821
-
An upstream U-snRNA gene-like promoter is required for transcription of the Arabidopsis thaliana 7SL RNA gene
-
Heard DJ, Filipowicz W, Marques JP, Palme K, Gualberto JM (1995) An upstream U-snRNA gene-like promoter is required for transcription of the Arabidopsis thaliana 7SL RNA gene. Nucleic Acids Res 23:1970-1976
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 1970-1976
-
-
Heard, D.J.1
Filipowicz, W.2
Marques, J.P.3
Palme, K.4
Gualberto, J.M.5
-
67
-
-
0035920155
-
Small nuclear RNA genes: A model system to study fundamental mechanisms of transcription
-
Hernandez N (2001) Small nuclear RNA genes: A model system to study fundamental mechanisms of transcription. J Biol Chem 276:26733-26736
-
(2001)
J Biol Chem
, vol.276
, pp. 26733-26736
-
-
Hernandez, N.1
-
69
-
-
0026770382
-
Differential antisense transcription from the Dictyostelium EB4 gene locus: Implications on antisense-mediated regulation of mRNA stability
-
Hildebrandt M, Nellen W (1992) Differential antisense transcription from the Dictyostelium EB4 gene locus: Implications on antisense-mediated regulation of mRNA stability. Cell 69:197-204
-
(1992)
Cell
, vol.69
, pp. 197-204
-
-
Hildebrandt, M.1
Nellen, W.2
-
70
-
-
33745153118
-
Identification of the major spliceosomal RNAs in Dictyostelium discoideum reveals developmentally regulated U2 variants and polyadenylated snRNAs
-
Hinas A, Larsson P, Avesson L, Kirsebom LA, Virtanen A, Söderbom F (2006) Identification of the major spliceosomal RNAs in Dictyostelium discoideum reveals developmentally regulated U2 variants and polyadenylated snRNAs. Eukaryot Cell 5:924-934
-
(2006)
Eukaryot Cell
, vol.5
, pp. 924-934
-
-
Hinas, A.1
Larsson, P.2
Avesson, L.3
Kirsebom, L.A.4
Virtanen, A.5
Söderbom, F.6
-
71
-
-
23644457818
-
Genome-wide analyses of two families of snoRNA genes from Drosophila melanogaster, demonstrating the extensive utilization of introns for coding of snoRNAs
-
Huang ZP, Zhou H, He HL, Chen CL, Liang D, Qu LH (2005) Genome-wide analyses of two families of snoRNA genes from Drosophila melanogaster, demonstrating the extensive utilization of introns for coding of snoRNAs. RNA 11:1303-1316
-
(2005)
RNA
, vol.11
, pp. 1303-1316
-
-
Huang, Z.P.1
Zhou, H.2
He, H.L.3
Chen, C.L.4
Liang, D.5
Qu, L.H.6
-
72
-
-
0142184341
-
Global analysis of protein localization in budding yeast
-
Huh WK et al (2003) Global analysis of protein localization in budding yeast. Nature 425:686-691
-
(2003)
Nature
, vol.425
, pp. 686-691
-
-
Huh, W.K.1
-
73
-
-
7244245762
-
Finishing the euchromatic sequence of the human genome
-
Human Genome Sequencing C
-
Human Genome Sequencing C (2004) Finishing the euchromatic sequence of the human genome. Nature 431:931
-
(2004)
Nature
, vol.431
, pp. 931
-
-
-
74
-
-
33646883455
-
The principles of guiding by RNA: Chimeric RNA-protein enzymes
-
Hüttenhofer A, Schattner P (2006) The principles of guiding by RNA: chimeric RNA-protein enzymes. Nat Rev Genet 7:475-482
-
(2006)
Nat Rev Genet
, vol.7
, pp. 475-482
-
-
Hüttenhofer, A.1
Schattner, P.2
-
75
-
-
32644439243
-
Experimental approaches to identify non-coding RNAs
-
Hüttenhofer A, Vogel J (2006) Experimental approaches to identify non-coding RNAs. Nucleic Acids Res 34:635
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 635
-
-
Hüttenhofer, A.1
Vogel, J.2
-
76
-
-
0035355205
-
RNomics: An experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse
-
Hüttenhofer A et al (2001) RNomics: An experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J 20:2943-2953
-
(2001)
EMBO J
, vol.20
, pp. 2943-2953
-
-
Hüttenhofer, A.1
-
78
-
-
0035253857
-
A small nucleolar guide RNA functions both in 2′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA
-
Jády BE, Kiss T (2001) A small nucleolar guide RNA functions both in 2′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA. EMBO J 20:541-551
-
(2001)
EMBO J
, vol.20
, pp. 541-551
-
-
Jády, B.E.1
Kiss, T.2
-
79
-
-
18844373039
-
Exploring the functions of RNA interference pathway proteins: Some functions are more RISCy than others?
-
Jaronczyk K, Carmichael JB, Hobman TC (2005) Exploring the functions of RNA interference pathway proteins: Some functions are more RISCy than others? Biochem J 387:561-571
-
(2005)
Biochem J
, vol.387
, pp. 561-571
-
-
Jaronczyk, K.1
Carmichael, J.B.2
Hobman, T.C.3
-
80
-
-
0021100021
-
Nucleotide sequence of Dictyostelium small nuclear RNA Dd8 not homologous to any other sequenced small nuclear RNA
-
Kaneda S, Gotoh O, Seno T, Takeishi K (1983) Nucleotide sequence of Dictyostelium small nuclear RNA Dd8 not homologous to any other sequenced small nuclear RNA. J Biol Chem 258:10606-10613
-
(1983)
J Biol Chem
, vol.258
, pp. 10606-10613
-
-
Kaneda, S.1
Gotoh, O.2
Seno, T.3
Takeishi, K.4
-
81
-
-
30944458014
-
Developmentally regulated DNA methylation in Dictyostelium discoideum
-
Katoh M, Curk T, Xu Q, Zupan B, Kuspa A, Shaulsky G (2006) Developmentally regulated DNA methylation in Dictyostelium discoideum. Eukaryot Cell 5:18-25
-
(2006)
Eukaryot Cell
, vol.5
, pp. 18-25
-
-
Katoh, M.1
Curk, T.2
Xu, Q.3
Zupan, B.4
Kuspa, A.5
Shaulsky, G.6
-
82
-
-
1342346710
-
A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans
-
Kennedy S, Wang D, Ruvkun G (2004) A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans. Nature 427:645-649
-
(2004)
Nature
, vol.427
, pp. 645-649
-
-
Kennedy, S.1
Wang, D.2
Ruvkun, G.3
-
84
-
-
0024424453
-
An antisense mRNA directs the covalent modification of the transcript encoding fibroblast growth factor in Xenopus oocytes
-
Kimelman D, Kirschner MW (1989) An antisense mRNA directs the covalent modification of the transcript encoding fibroblast growth factor in Xenopus oocytes. Cell 59:687
-
(1989)
Cell
, vol.59
, pp. 687
-
-
Kimelman, D.1
Kirschner, M.W.2
-
85
-
-
30844442607
-
The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C
-
Kishore S, Stamm S (2006) The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C. Science 311:230-232
-
(2006)
Science
, vol.311
, pp. 230-232
-
-
Kishore, S.1
Stamm, S.2
-
86
-
-
0037133942
-
Small nucleolar RNAs: An abundant group of noncoding RNAs with diverse cellular functions
-
Kiss T (2002) Small nucleolar RNAs: An abundant group of noncoding RNAs with diverse cellular functions. Cell 109:145-148
-
(2002)
Cell
, vol.109
, pp. 145-148
-
-
Kiss, T.1
-
87
-
-
0026670514
-
7-2/MRP RNAs in plant and mammalian cells: Association with higher order structures in the nucleolus
-
Kiss T, Marshallsay C, Filipowicz W (1992) 7-2/MRP RNAs in plant and mammalian cells: Association with higher order structures in the nucleolus. EMBO J 11:3737-3746
-
(1992)
EMBO J
, vol.11
, pp. 3737-3746
-
-
Kiss, T.1
Marshallsay, C.2
Filipowicz, W.3
-
88
-
-
0030604698
-
Site-specific ribose methylation of preribosomal RNA: A novel function for small nucleolar RNAs
-
Kiss-László Z, Henry Y, Bachellerie JP, Caizergues-Ferrer M, Kiss T (1996) Site-specific ribose methylation of preribosomal RNA: A novel function for small nucleolar RNAs. Cell 85:1077-1088
-
(1996)
Cell
, vol.85
, pp. 1077-1088
-
-
Kiss-László, Z.1
Henry, Y.2
Bachellerie, J.P.3
Caizergues-Ferrer, M.4
Kiss, T.5
-
90
-
-
28544445987
-
Silencing of retrotransposons in Dictyostelium by DNA methylation and RNAi
-
Kuhlmann M et al (2005) Silencing of retrotransposons in Dictyostelium by DNA methylation and RNAi. Nucleic Acids Res 33:6405-6417
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 6405-6417
-
-
Kuhlmann, M.1
-
91
-
-
0028802622
-
RNA polymerase II transcribes Dictyostelium untranslatable gene, dutA, specifically in the developmental phase
-
Kumimoto H, Yoshida H, Okamoto K (1995) RNA polymerase II transcribes Dictyostelium untranslatable gene, dutA, specifically in the developmental phase. Biochem Biophys Res Commun 216:273-278
-
(1995)
Biochem Biophys Res Commun
, vol.216
, pp. 273-278
-
-
Kumimoto, H.1
Yoshida, H.2
Okamoto, K.3
-
92
-
-
0029619118
-
Analysis of gene function in Dictyostelium
-
Kuspa A, Dingermann T, Nellen W (1995) Analysis of gene function in Dictyostelium. Experientia 51:1116-1123
-
(1995)
Experientia
, vol.51
, pp. 1116-1123
-
-
Kuspa, A.1
Dingermann, T.2
Nellen, W.3
-
93
-
-
33746527679
-
Characterization of the piRNA complex from rat testes
-
Lau NC et al (2006) Characterization of the piRNA complex from rat testes. Science 313:363-367
-
(2006)
Science
, vol.313
, pp. 363-367
-
-
Lau, N.C.1
-
94
-
-
0035955366
-
An extensive class of small RNAs in Caenorhabditis elegans
-
Lee RC, Ambros V (2001) An extensive class of small RNAs in Caenorhabditis elegans. Science 294:862-864
-
(2001)
Science
, vol.294
, pp. 862-864
-
-
Lee, R.C.1
Ambros, V.2
-
95
-
-
29944442623
-
Two classes of endogenous small RNAs in Tetrahymena thermophila
-
Lee SR, Collins K (2006) Two classes of endogenous small RNAs in Tetrahymena thermophila. Genes Dev 20:28-33
-
(2006)
Genes Dev
, vol.20
, pp. 28-33
-
-
Lee, S.R.1
Collins, K.2
-
96
-
-
0027751663
-
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
Lee RC, Feinbaum RL, Ambros V (1993) The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75:843-854
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
Feinbaum, R.L.2
Ambros, V.3
-
97
-
-
17444368294
-
Dictyostelium CBP3 associates with actin cytoskeleton and is related to slug migration
-
Lee CH et al (2005) Dictyostelium CBP3 associates with actin cytoskeleton and is related to slug migration. Biochim Biophys Acta 1743:281-290
-
(2005)
Biochim Biophys Acta
, vol.1743
, pp. 281-290
-
-
Lee, C.H.1
-
98
-
-
33645464445
-
Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans
-
Lee RC, Hammell CM, Ambros V (2006) Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans. RNA 12:589-597
-
(2006)
RNA
, vol.12
, pp. 589-597
-
-
Lee, R.C.1
Hammell, C.M.2
Ambros, V.3
-
99
-
-
0000341684
-
Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus
-
Lerner MR, Steitz JA (1979) Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus. Proc Natl Acad Sci USA 76:5495-5499
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 5495-5499
-
-
Lerner, M.R.1
Steitz, J.A.2
-
100
-
-
0019829528
-
Snurps and scyrps
-
Lerner MR, Steitz JA (1981) Snurps and scyrps. Cell 25:298-300
-
(1981)
Cell
, vol.25
, pp. 298-300
-
-
Lerner, M.R.1
Steitz, J.A.2
-
101
-
-
0018872571
-
Are snRNPs involved in splicing?
-
Lerner MR, Boyle JA, Mount SM, Wolin SL, Steitz JA (1980) Are snRNPs involved in splicing? Nature 283:220-224
-
(1980)
Nature
, vol.283
, pp. 220-224
-
-
Lerner, M.R.1
Boyle, J.A.2
Mount, S.M.3
Wolin, S.L.4
Steitz, J.A.5
-
102
-
-
26944434790
-
Antiviral silencing in animals
-
Li HW, Ding SW (2005) Antiviral silencing in animals. FEBS Lett 579:5965-5973
-
(2005)
FEBS Lett
, vol.579
, pp. 5965-5973
-
-
Li, H.W.1
Ding, S.W.2
-
103
-
-
0036218355
-
The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA
-
Liang XH, Xu YX, Michaeli S (2002) The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA. RNA 8:237-246
-
(2002)
RNA
, vol.8
, pp. 237-246
-
-
Liang, X.H.1
Xu, Y.X.2
Michaeli, S.3
-
104
-
-
4444368187
-
Argonaute2 is the catalytic engine of mammalian RNAi
-
Liu J et al (2004) Argonaute2 is the catalytic engine of mammalian RNAi. Science 305:1437-1441
-
(2004)
Science
, vol.305
, pp. 1437-1441
-
-
Liu, J.1
-
105
-
-
0027241726
-
Two transmembrane signaling mechanisms control expression of the cAMP receptor gene CAR1 during Dictyostelium development
-
Louis JM, Saxe CL 3rd, Kimmel AR (1993) Two transmembrane signaling mechanisms control expression of the cAMP receptor gene CAR1 during Dictyostelium development. Proc Natl Acad Sci USA 90:5969-5973
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 5969-5973
-
-
Louis, J.M.1
Saxe III, C.L.2
Kimmel, A.R.3
-
106
-
-
0033582628
-
A computational screen for methylation guide snoRNAs in yeast
-
Lowe TM, Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283:1168-1171
-
(1999)
Science
, vol.283
, pp. 1168-1171
-
-
Lowe, T.M.1
Eddy, S.R.2
-
107
-
-
33748544977
-
Identification of small non-coding RNAs from mitochondria and chloroplasts
-
Lung B et al (2006) Identification of small non-coding RNAs from mitochondria and chloroplasts. Nucleic Acids Res 34:3842-3852
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3842-3852
-
-
Lung, B.1
-
108
-
-
0028244439
-
The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins
-
Lygerou Z, Mitchell P, Petfalski E, Seraphin B, Tollervey D (1994) The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins. Genes Dev 8:1423-1433
-
(1994)
Genes Dev
, vol.8
, pp. 1423-1433
-
-
Lygerou, Z.1
Mitchell, P.2
Petfalski, E.3
Seraphin, B.4
Tollervey, D.5
-
109
-
-
0029981894
-
Accurate processing of a eukaryotic precursor ribosomal RNA by ribonuclease MRP in vitro
-
Lygerou Z, Allmang C, Tollervey D, Seraphin B (1996) Accurate processing of a eukaryotic precursor ribosomal RNA by ribonuclease MRP in vitro. Science 272:268-270
-
(1996)
Science
, vol.272
, pp. 268-270
-
-
Lygerou, Z.1
Allmang, C.2
Tollervey, D.3
Seraphin, B.4
-
110
-
-
10744225585
-
Changing patterns of gene expression in Dictyostelium prestalk cell subtypes recognized by in situ hybridization with genes from microarray analyses
-
Maeda M et al (2003) Changing patterns of gene expression in Dictyostelium prestalk cell subtypes recognized by in situ hybridization with genes from microarray analyses. Eukaryot Cell 2:627-637
-
(2003)
Eukaryot Cell
, vol.2
, pp. 627-637
-
-
Maeda, M.1
-
111
-
-
33745271035
-
Functions of microRNAs and related small RNAs in plants
-
Mallory AC, Vaucheret H (2006) Functions of microRNAs and related small RNAs in plants. Nat Genet 38(Suppl):S31-36
-
(2006)
Nat Genet
, vol.38
, Issue.SUPPL.
-
-
Mallory, A.C.1
Vaucheret, H.2
-
112
-
-
0036898607
-
Experimental RNomics. Identification of 140 Candidates for Small Non-Messenger RNAs in the Plant Arabidopsis thaliana
-
Marker C et al (2002) Experimental RNomics. Identification of 140 Candidates for Small Non-Messenger RNAs in the Plant Arabidopsis thaliana. Curr Biol 12:2002-2013
-
(2002)
Curr Biol
, vol.12
, pp. 2002-2013
-
-
Marker, C.1
-
113
-
-
17844385813
-
Structural implications of novel diversity in eucaryal RNase P RNA
-
Marquez SM et al (2005) Structural implications of novel diversity in eucaryal RNase P RNA. RNA 11:739-751
-
(2005)
RNA
, vol.11
, pp. 739-751
-
-
Marquez, S.M.1
-
114
-
-
0036179411
-
RNAi in Dictyostelium: The role of RNA-directed RNA polymerases and double-stranded RNase
-
Martens H, Novotny J, Oberstrass J, Steck TL, Postlethwait P, Nellen W (2002) RNAi in Dictyostelium: The role of RNA-directed RNA polymerases and double-stranded RNase. Mol Biol Cell 13:445-453
-
(2002)
Mol Biol Cell
, vol.13
, pp. 445-453
-
-
Martens, H.1
Novotny, J.2
Oberstrass, J.3
Steck, T.L.4
Postlethwait, P.5
Nellen, W.6
-
115
-
-
6344282751
-
Control of cell type proportioning in Dictyostelium discoideum by differentiation-inducing factor as determined by in situ hybridization
-
Maruo T et al (2004) Control of cell type proportioning in Dictyostelium discoideum by differentiation-inducing factor as determined by in situ hybridization. Eukaryot Cell 3:1241-1248
-
(2004)
Eukaryot Cell
, vol.3
, pp. 1241-1248
-
-
Maruo, T.1
-
116
-
-
15944402920
-
Small regulatory RNAs in mammals
-
Mattick JS, Makunin IV (2005) Small regulatory RNAs in mammals. Hum Mol Genet 14(1):R121-R132
-
(2005)
Hum Mol Genet
, vol.14
, Issue.1
-
-
Mattick, J.S.1
Makunin, I.V.2
-
118
-
-
10644237968
-
RNAi-mediated pathways in the nucleus
-
Matzke MA, Birchler JA (2005) RNAi-mediated pathways in the nucleus. Nat Rev Genet 6:24-35
-
(2005)
Nat Rev Genet
, vol.6
, pp. 24-35
-
-
Matzke, M.A.1
Birchler, J.A.2
-
119
-
-
33747706117
-
Non-coding RNAs in the nervous system
-
Mehler MF, Mattick JS (2006) Non-coding RNAs in the nervous system. J Physiol 575:333-341
-
(2006)
J Physiol
, vol.575
, pp. 333-341
-
-
Mehler, M.F.1
Mattick, J.S.2
-
120
-
-
3242736704
-
Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs
-
Meister G, Landthaler M, Patkaniowska A, Dorsett Y, Teng G, Tuschl T (2004) Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs. Mol Cell 15:185-197
-
(2004)
Mol Cell
, vol.15
, pp. 185-197
-
-
Meister, G.1
Landthaler, M.2
Patkaniowska, A.3
Dorsett, Y.4
Teng, G.5
Tuschl, T.6
-
121
-
-
1942535718
-
Small RNAs in genome rearrangement in Tetrahymena
-
Mochizuki K, Gorovsky MA (2004) Small RNAs in genome rearrangement in Tetrahymena. Curr Opin Genet Dev 14:181-187
-
(2004)
Curr Opin Genet Dev
, vol.14
, pp. 181-187
-
-
Mochizuki, K.1
Gorovsky, M.A.2
-
122
-
-
33645702761
-
Fragrep: An efficient search tool for fragmented patterns in genomic sequences
-
Mosig A, Sameith K, Stadler P (2006) Fragrep: An efficient search tool for fragmented patterns in genomic sequences. Genomics Proteomics Bioinformatics 4:56-60
-
(2006)
Genomics Proteomics Bioinformatics
, vol.4
, pp. 56-60
-
-
Mosig, A.1
Sameith, K.2
Stadler, P.3
-
124
-
-
0041813302
-
Structure, function and evolution of the signal recognition particle
-
Nagai K, Oubridge C, Kuglstatter A, Menichelli E, Isel C, Jovine L (2003) Structure, function and evolution of the signal recognition particle. EMBO J 22:3479-3485
-
(2003)
EMBO J
, vol.22
, pp. 3479-3485
-
-
Nagai, K.1
Oubridge, C.2
Kuglstatter, A.3
Menichelli, E.4
Isel, C.5
Jovine, L.6
-
125
-
-
33645958296
-
Virus-encoded microRNAs: Novel regulators of gene expression
-
Nair V, Zavolan M (2006) Virus-encoded microRNAs: Novel regulators of gene expression. Trends Microbiol 14:169-175
-
(2006)
Trends Microbiol
, vol.14
, pp. 169-175
-
-
Nair, V.1
Zavolan, M.2
-
126
-
-
0014408858
-
Studies on nucleolar 4 to 6 S ribonucleic acid of Novikoff hepatoma cells
-
Nakamura T, Prestayko AW, Busch H (1968) Studies on nucleolar 4 to 6 S ribonucleic acid of Novikoff hepatoma cells. J Biol Chem 243:1368-1375
-
(1968)
J Biol Chem
, vol.243
, pp. 1368-1375
-
-
Nakamura, T.1
Prestayko, A.W.2
Busch, H.3
-
127
-
-
9644281575
-
Ribosomal RNA processing and ribosome biogenesis in eukaryotes
-
Nazar RN (2004) Ribosomal RNA processing and ribosome biogenesis in eukaryotes. IUBMB Life 56:457-465
-
(2004)
IUBMB Life
, vol.56
, pp. 457-465
-
-
Nazar, R.N.1
-
128
-
-
0026545703
-
Mechanisms of gene regulation by endogenous and artificially introduced antisense RNA
-
Nellen W et al (1992) Mechanisms of gene regulation by endogenous and artificially introduced antisense RNA. Biochem Soc Trans 20:750-754
-
(1992)
Biochem Soc Trans
, vol.20
, pp. 750-754
-
-
Nellen, W.1
-
129
-
-
0030771087
-
Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA
-
Ni J, Tien AL, Fournier MJ (1997) Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA. Cell 89:565-573
-
(1997)
Cell
, vol.89
, pp. 565-573
-
-
Ni, J.1
Tien, A.L.2
Fournier, M.J.3
-
130
-
-
0030581160
-
Intron-encoded, antisense small nucleolar RNAs: The characterization of nine novel species points to their direct role as guides for the 2′-O-ribose methylation of rRNAs
-
Nicoloso M, Qu LH, Michot B, Bachellerie JP (1996) Intron-encoded, antisense small nucleolar RNAs: The characterization of nine novel species points to their direct role as guides for the 2′-O-ribose methylation of rRNAs. J Mol Biol 260:178-195
-
(1996)
J Mol Biol
, vol.260
, pp. 178-195
-
-
Nicoloso, M.1
Qu, L.H.2
Michot, B.3
Bachellerie, J.P.4
-
131
-
-
0030942115
-
Antisense-mediated regulation of Annexin VII gene expression during the transition from growth to differentiation in Dictyostelium discoideum
-
Okafuji T, Abe F, Maeda Y (1997) Antisense-mediated regulation of Annexin VII gene expression during the transition from growth to differentiation in Dictyostelium discoideum. Gene 189:49
-
(1997)
Gene
, vol.189
, pp. 49
-
-
Okafuji, T.1
Abe, F.2
Maeda, Y.3
-
132
-
-
3142729150
-
Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways
-
Okamura K, Ishizuka A, Siomi H, Siomi MC (2004) Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways. Genes Dev 18:1655-1666
-
(2004)
Genes Dev
, vol.18
, pp. 1655-1666
-
-
Okamura, K.1
Ishizuka, A.2
Siomi, H.3
Siomi, M.C.4
-
133
-
-
0037673518
-
RNA-modifying machines in archaea
-
Omer AD, Ziesche S, Decatur WA, Fournier MJ, Dennis PP (2003) RNA-modifying machines in archaea. Mol Microbiol 48:617-629
-
(2003)
Mol Microbiol
, vol.48
, pp. 617-629
-
-
Omer, A.D.1
Ziesche, S.2
Decatur, W.A.3
Fournier, M.J.4
Dennis, P.P.5
-
134
-
-
14844302397
-
Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation
-
Onodera Y, Haag JR, Ream T, Nunes PC, Pontes O, Pikaard CS (2005) Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120:613
-
(2005)
Cell
, vol.120
, pp. 613
-
-
Onodera, Y.1
Haag, J.R.2
Ream, T.3
Nunes, P.C.4
Pontes, O.5
Pikaard, C.S.6
-
135
-
-
0026662281
-
Structural organization of the genes encoding the small nuclear RNAs U1 to U6 of Tetrahymena thermophila is very similar to that of plant small nuclear RNA genes
-
Orum H, Nielsen H, Engberg J (1992) Structural organization of the genes encoding the small nuclear RNAs U1 to U6 of Tetrahymena thermophila is very similar to that of plant small nuclear RNA genes. J Mol Biol 227:114-121
-
(1992)
J Mol Biol
, vol.227
, pp. 114-121
-
-
Orum, H.1
Nielsen, H.2
Engberg, J.3
-
136
-
-
0033529256
-
RNase P RNAs from some Archaea are catalytically active
-
Pannucci JA, Haas ES, Hall TA, Harris JK, Brown JW (1999) RNase P RNAs from some Archaea are catalytically active. Proc Natl Acad Sci USA 96:7803-7808
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 7803-7808
-
-
Pannucci, J.A.1
Haas, E.S.2
Hall, T.A.3
Harris, J.K.4
Brown, J.W.5
-
137
-
-
33750366095
-
Argonaute: A scaffold for the function of short regulatory RNAs
-
Parker JS, Barford D (2006) Argonaute: A scaffold for the function of short regulatory RNAs. Trends Biochem Sci 31:622-630
-
(2006)
Trends Biochem Sci
, vol.31
, pp. 622-630
-
-
Parker, J.S.1
Barford, D.2
-
138
-
-
0034652838
-
Survey and summary transcription by RNA polymerases I and III
-
Paule MR, White RJ (2000) Survey and summary transcription by RNA polymerases I and III. Nucleic Acids Res 28:1283-1298
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 1283-1298
-
-
Paule, M.R.1
White, R.J.2
-
139
-
-
0031883685
-
Characterization of a novel small RNA encoded by Dictyostelium discoideum mitochondrial DNA
-
Pi M, Morio T, Urushihara H, Tanaka Y (1998) Characterization of a novel small RNA encoded by Dictyostelium discoideum mitochondrial DNA. Mol Gen Genet 257:124-131
-
(1998)
Mol Gen Genet
, vol.257
, pp. 124-131
-
-
Pi, M.1
Morio, T.2
Urushihara, H.3
Tanaka, Y.4
-
140
-
-
23344445110
-
Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes
-
Piccinelli P, Rosenblad MA, Samuelsson T (2005) Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes. Nucleic Acids Res 33:4485-4495
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 4485-4495
-
-
Piccinelli, P.1
Rosenblad, M.A.2
Samuelsson, T.3
-
142
-
-
33644863677
-
HelF, a putative RNA helicase acts as a nuclear suppressor of RNAi but not antisense mediated gene silencing
-
Popova B, Kuhlmann M, Hinas A, Söderbom F, Nellen W (2006) HelF, a putative RNA helicase acts as a nuclear suppressor of RNAi but not antisense mediated gene silencing. Nucleic Acids Res 34:773-784
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 773-784
-
-
Popova, B.1
Kuhlmann, M.2
Hinas, A.3
Söderbom, F.4
Nellen, W.5
-
143
-
-
0014944299
-
Low molecular weight RNA associated with 28 s nucleolar RNA
-
Prestayko AW, Tonato M, Busch H (1970) Low molecular weight RNA associated with 28 s nucleolar RNA. J Mol Biol 47:505-515
-
(1970)
J Mol Biol
, vol.47
, pp. 505-515
-
-
Prestayko, A.W.1
Tonato, M.2
Busch, H.3
-
144
-
-
33644845476
-
Identification of novel Proteins in Dictyostelium discoideum by comparative proteomic approaches
-
Reinders Y, Schulz I, Gräf R, Sickmann A (2006) Identification of novel Proteins in Dictyostelium discoideum by comparative proteomic approaches. J Proteome Res 5:589-598
-
(2006)
J Proteome Res
, vol.5
, pp. 589-598
-
-
Reinders, Y.1
Schulz, I.2
Gräf, R.3
Sickmann, A.4
-
145
-
-
0036046159
-
Worldwide mutation spectrum in cartilage-hair hypoplasia: Ancient founder origin of the major70A → G mutation of the untranslated RMRP
-
Ridanpää M, Sistonen P, Rockas S, Rimoin DL, Makitie O, Kaitila I (2002) Worldwide mutation spectrum in cartilage-hair hypoplasia: Ancient founder origin of the major70A → G mutation of the untranslated RMRP. Eur J Hum Genet 10:439-447
-
(2002)
Eur J Hum Genet
, vol.10
, pp. 439-447
-
-
Ridanpää, M.1
Sistonen, P.2
Rockas, S.3
Rimoin, D.L.4
Makitie, O.5
Kaitila, I.6
-
146
-
-
17744393618
-
Mutations in the RNA component of RNase MRP cause a pleiotropic human disease, cartilage-hair hypoplasia
-
Ridanpää M et al (2001) Mutations in the RNA component of RNase MRP cause a pleiotropic human disease, cartilage-hair hypoplasia. Cell 104:195-203
-
(2001)
Cell
, vol.104
, pp. 195-203
-
-
Ridanpää, M.1
-
148
-
-
33646483181
-
The role of RNAs in the regulation of virulence-gene expression
-
Romby P, Vandenesch F, Wagner EGH (2006) The role of RNAs in the regulation of virulence-gene expression. Curr Opin Microbiol 9:229
-
(2006)
Curr Opin Microbiol
, vol.9
, pp. 229
-
-
Romby, P.1
Vandenesch, F.2
Wagner, E.G.H.3
-
149
-
-
2442651537
-
Identification and comparative analysis of components from the signal recognition particle in protozoa and fungi
-
Rosenblad MA, Zwieb C, Samuelsson T (2004) Identification and comparative analysis of components from the signal recognition particle in protozoa and fungi. BMC Genomics 5:5
-
(2004)
BMC Genomics
, vol.5
, pp. 5
-
-
Rosenblad, M.A.1
Zwieb, C.2
Samuelsson, T.3
-
150
-
-
33747369856
-
Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome
-
Saito K et al (2006) Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome. Genes Dev 20:2214-2222
-
(2006)
Genes Dev
, vol.20
, pp. 2214-2222
-
-
Saito, K.1
-
151
-
-
4043120552
-
Genome-wide searching for pseudouridylation guide snoRNAs: Analysis of the Saccharomyces cerevisiae genome
-
Schattner P, Decatur WA, Davis CA, Ares M Jr, Fournier MJ, Lowe TM (2004) Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome. Nucleic Acids Res 32:4281-4296
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 4281-4296
-
-
Schattner, P.1
Decatur, W.A.2
Davis, C.A.3
Ares Jr., M.4
Fournier, M.J.5
Lowe, T.M.6
-
152
-
-
0027367147
-
Nuclear RNase MRP is required for correct processing of pre-5.8S rRNA in Saccharomyces cerevisiae
-
Schmitt ME, Clayton DA (1993) Nuclear RNase MRP is required for correct processing of pre-5.8S rRNA in Saccharomyces cerevisiae. Mol Cell Biol 13:7935-7941
-
(1993)
Mol Cell Biol
, vol.13
, pp. 7935-7941
-
-
Schmitt, M.E.1
Clayton, D.A.2
-
153
-
-
0037108150
-
Recruitment of RNA polymerase III to its target promoters
-
Schramm L, Hernandez N (2002) Recruitment of RNA polymerase III to its target promoters. Genes Dev 16:2593-2620
-
(2002)
Genes Dev
, vol.16
, pp. 2593-2620
-
-
Schramm, L.1
Hernandez, N.2
-
154
-
-
0037031152
-
Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi
-
Simmer F et al (2002) Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi. Curr Biol 12:1317-1319
-
(2002)
Curr Biol
, vol.12
, pp. 1317-1319
-
-
Simmer, F.1
-
155
-
-
9144256178
-
Sequential 2′-O-methylation of archaeal pre-tRNATrp nucleotides is guided by the intron-encoded but trans-acting box C/D ribonucleoprotein of pre-tRNA
-
Singh SK, Gurha P, Tran EJ, Maxwell ES, Gupta R (2004) Sequential 2′-O-methylation of archaeal pre-tRNATrp nucleotides is guided by the intron-encoded but trans-acting box C/D ribonucleoprotein of pre-tRNA. J Biol Chem 279:47661-47671
-
(2004)
J Biol Chem
, vol.279
, pp. 47661-47671
-
-
Singh, S.K.1
Gurha, P.2
Tran, E.J.3
Maxwell, E.S.4
Gupta, R.5
-
157
-
-
0043269205
-
The RNA polymerase II core promoter
-
Smale ST, Kadonaga JT (2003) The RNA polymerase II core promoter. Ann Rev Biochem 72:449-479
-
(2003)
Ann Rev Biochem
, vol.72
, pp. 449-479
-
-
Smale, S.T.1
Kadonaga, J.T.2
-
158
-
-
33847218363
-
Small nucleolar RNAs: Identification, structure, and function
-
In: Nellen W, Hammann C (eds) Springer Berlin Heidelberg New York
-
Söderbom F (2006) Small nucleolar RNAs: Identification, structure, and function. In: Nellen W, HammAnn C (eds) Small RNAs: analysis and regulatory functions. Springer Berlin Heidelberg New York 31-55
-
(2006)
Small RNAs: Analysis and Regulatory Functions
, pp. 31-55
-
-
Söderbom, F.1
-
159
-
-
0032489021
-
Mechanical devices of the spliceosome: Motors, clocks, springs, and things
-
Staley JP, Guthrie C (1998) Mechanical devices of the spliceosome: motors, clocks, springs, and things. Cell 92:315-326
-
(1998)
Cell
, vol.92
, pp. 315-326
-
-
Staley, J.P.1
Guthrie, C.2
-
160
-
-
0028927259
-
Partial purification and characterization of RNase P from Dictyostelium discoideum
-
Stathopoulos C, Kalpaxis DL, Drainas D (1995) Partial purification and characterization of RNase P from Dictyostelium discoideum. Eur J Biochem 228:976-980
-
(1995)
Eur J Biochem
, vol.228
, pp. 976-980
-
-
Stathopoulos, C.1
Kalpaxis, D.L.2
Drainas, D.3
-
161
-
-
4243088097
-
The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
-
Stein LD et al (2003) The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics. PLoS Biol 1:E45
-
(2003)
PLoS Biol
, vol.1
-
-
Stein, L.D.1
-
162
-
-
14044259997
-
Dictyostelium as host model for pathogenesis
-
Steinert M, Heuner K (2005) Dictyostelium as host model for pathogenesis. Cell Microbiol 7:307-314
-
(2005)
Cell Microbiol
, vol.7
, pp. 307-314
-
-
Steinert, M.1
Heuner, K.2
-
163
-
-
7444233156
-
A gene expression map for the euchromatic genome of Drosophila melanogaster
-
Stolc V et al (2004) A gene expression map for the euchromatic genome of Drosophila melanogaster. Science 306:655-660
-
(2004)
Science
, vol.306
, pp. 655-660
-
-
Stolc, V.1
-
164
-
-
20144386497
-
Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays
-
Stolc V et al (2005) Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays. Proc Natl Acad Sci USA 102:4453-4458
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 4453-4458
-
-
Stolc, V.1
-
167
-
-
14644444517
-
Gene organization features in A/T-rich organisms
-
Szafranski K, Lehmann R, Parra G, Guigo R, Glöckner G (2005) Gene organization features in A/T-rich organisms. J Mol Evol 60:90-98
-
(2005)
J Mol Evol
, vol.60
, pp. 90-98
-
-
Szafranski, K.1
Lehmann, R.2
Parra, G.3
Guigo, R.4
Glöckner, G.5
-
168
-
-
0018587987
-
Low molecular weight nuclear RNA species in Dictyostelium discoideum
-
Takeishi K, Kaneda S (1979) Low molecular weight nuclear RNA species in Dictyostelium discoideum. Nucleic Acids Symp Ser s125-127
-
(1979)
Nucleic Acids Symp Ser
-
-
Takeishi, K.1
Kaneda, S.2
-
169
-
-
0019605657
-
Isolation and characterization of small nuclear RNAs from Dictyostelium discoideum
-
Takeishi K, Kaneda S (1981) Isolation and characterization of small nuclear RNAs from Dictyostelium discoideum. J Biochem. 90:299-308
-
(1981)
J Biochem
, vol.90
, pp. 299-308
-
-
Takeishi, K.1
Kaneda, S.2
-
170
-
-
0037188531
-
Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus
-
Tang TH et al (2002) Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus. Proc Natl Acad Sci USA 99:7536-7541
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 7536-7541
-
-
Tang, T.H.1
-
171
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
The Arabidopsis Genome I
-
The Arabidopsis Genome I (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408:796
-
(2000)
Nature
, vol.408
, pp. 796
-
-
-
172
-
-
27244453149
-
Severely incapacitating mutations in patients with extreme short stature identify RNA-processing endoribonuclease RMRP as an essential cell growth regulator
-
Thiel CT et al (2005) Severely incapacitating mutations in patients with extreme short stature identify RNA-processing endoribonuclease RMRP as an essential cell growth regulator. Am J Hum Genet 77:795-806
-
(2005)
Am J Hum Genet
, vol.77
, pp. 795-806
-
-
Thiel, C.T.1
-
173
-
-
0035109393
-
Non-coding snoRNA host genes in Drosophila: Expression strategies for modification guide snoRNAs
-
Tycowski KT, Steitz JA (2001) Non-coding snoRNA host genes in Drosophila: Expression strategies for modification guide snoRNAs. Eur J Cell Biol 80:119-125
-
(2001)
Eur J Cell Biol
, vol.80
, pp. 119-125
-
-
Tycowski, K.T.1
Steitz, J.A.2
-
174
-
-
0029855867
-
A small nucleolar RNA requirement for site-specific ribose methylation of rRNA in Xenopus
-
Tycowski KT, Smith CM, Shu MD, Steitz JA (1996) A small nucleolar RNA requirement for site-specific ribose methylation of rRNA in Xenopus. Proc Natl Acad Sci USA 93:14480-14485
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 14480-14485
-
-
Tycowski, K.T.1
Smith, C.M.2
Shu, M.D.3
Steitz, J.A.4
-
175
-
-
0032214692
-
Modification of U6 spliceosomal RNA is guided by other small RNAs
-
Tycowski KT, You ZH, Graham PJ, Steitz JA (1998) Modification of U6 spliceosomal RNA is guided by other small RNAs. Mol Cell 2:629-638
-
(1998)
Mol Cell
, vol.2
, pp. 629-638
-
-
Tycowski, K.T.1
You, Z.H.2
Graham, P.J.3
Steitz, J.A.4
-
176
-
-
1542298827
-
Small nucleolar RNAs that guide modification in trypanosomatids: Repertoire, targets, genome organisation, and unique functions
-
Uliel S, Liang XH, Unger R, Michaeli S (2004) Small nucleolar RNAs that guide modification in trypanosomatids: Repertoire, targets, genome organisation, and unique functions. Int J Parasitol 34:445-454
-
(2004)
Int J Parasitol
, vol.34
, pp. 445-454
-
-
Uliel, S.1
Liang, X.H.2
Unger, R.3
Michaeli, S.4
-
177
-
-
27644468494
-
A screen for conserved sequences with biased base composition identifies noncoding RNAs in the A-T rich genome of Plasmodium falciparum
-
Upadhyay R, Bawankar P, Malhotra D, Patankar S (2005) A screen for conserved sequences with biased base composition identifies noncoding RNAs in the A-T rich genome of Plasmodium falciparum. Mol Biochem Parasitol 144:149-158
-
(2005)
Mol Biochem Parasitol
, vol.144
, pp. 149-158
-
-
Upadhyay, R.1
Bawankar, P.2
Malhotra, D.3
Patankar, S.4
-
178
-
-
27744541450
-
snRNAs as the catalysts of pre-mRNA splicing
-
Valadkhan S (2005) snRNAs as the catalysts of pre-mRNA splicing. Curr Opin Chem Biol 9:603
-
(2005)
Curr Opin Chem Biol
, vol.9
, pp. 603
-
-
Valadkhan, S.1
-
180
-
-
0024297392
-
Structure and expression of the U5 snRNA gene of Arabidopsis thaliana. Conserved upstream sequence elements in plant U-RNA genes
-
Vankan P, Edoh D, Filipowicz W (1988) Structure and expression of the U5 snRNA gene of Arabidopsis thaliana. Conserved upstream sequence elements in plant U-RNA genes. Nucleic Acids Res 16:10425-10440
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 10425-10440
-
-
Vankan, P.1
Edoh, D.2
Filipowicz, W.3
-
181
-
-
22844446837
-
RNA polymerase IV and transcriptional silencing
-
Vaucheret H (2005) RNA polymerase IV and transcriptional silencing. Nat Genet 37:659-660
-
(2005)
Nat Genet
, vol.37
, pp. 659-660
-
-
Vaucheret, H.1
-
182
-
-
0344668837
-
Identification of 13 novel human modification guide RNAs
-
Vitali P, Royo H, Seitz H, Bachellerie J-P, Hüttenhofer A, Cavaillé J (2003) Identification of 13 novel human modification guide RNAs. Nucleic Acids Res 31:6543-6551
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6543-6551
-
-
Vitali, P.1
Royo, H.2
Seitz, H.3
Bachellerie, J.-P.4
Hüttenhofer, A.5
Cavaillé, J.6
-
183
-
-
22344445939
-
ADAR2-mediated editing of RNA substrates in the nucleolus is inhibited by C/D small nucleolar RNAs
-
Vitali P et al (2005) ADAR2-mediated editing of RNA substrates in the nucleolus is inhibited by C/D small nucleolar RNAs. J Cell Biol 169:745-753
-
(2005)
J Cell Biol
, vol.169
, pp. 745-753
-
-
Vitali, P.1
-
184
-
-
14344252157
-
Induction and suppression of RNA silencing: Insights from viral infections
-
Voinnet O (2005) Induction and suppression of RNA silencing: Insights from viral infections. Nat Rev Genet 6:206-220
-
(2005)
Nat Rev Genet
, vol.6
, pp. 206-220
-
-
Voinnet, O.1
-
185
-
-
0025363059
-
RNA-polymerase specificity of transcription of Arabidopsis U snRNA genes determined by promoter element spacing
-
Waibel F, Filipowicz W (1990) RNA-polymerase specificity of transcription of Arabidopsis U snRNA genes determined by promoter element spacing. Nature 346:199
-
(1990)
Nature
, vol.346
, pp. 199
-
-
Waibel, F.1
Filipowicz, W.2
-
186
-
-
22144436236
-
The role of the RNAi machinery in heterochromatin formation
-
Wassenegger M (2005) The role of the RNAi machinery in heterochromatin formation. Cell 122:13-16
-
(2005)
Cell
, vol.122
, pp. 13-16
-
-
Wassenegger, M.1
-
187
-
-
33644850032
-
Nomenclature and functions of RNA-directed RNA polymerases
-
Wassenegger M, Krczal G (2006) Nomenclature and functions of RNA-directed RNA polymerases. Trends Plant Sci 11:142-151
-
(2006)
Trends Plant Sci
, vol.11
, pp. 142-151
-
-
Wassenegger, M.1
Krczal, G.2
-
188
-
-
33745599586
-
Identification and characterization of two novel classes of small RNAs in the mouse germline: Retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes
-
Watanabe T et al (2006) Identification and characterization of two novel classes of small RNAs in the mouse germline: Retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes. Genes Dev 20:1732-1743
-
(2006)
Genes Dev
, vol.20
, pp. 1732-1743
-
-
Watanabe, T.1
-
189
-
-
0014387089
-
Small molecular weight monodisperse nuclear RNA
-
Weinberg RA, Penman S (1968) Small molecular weight monodisperse nuclear RNA. J Mol Biol 38:289-304
-
(1968)
J Mol Biol
, vol.38
, pp. 289-304
-
-
Weinberg, R.A.1
Penman, S.2
-
190
-
-
33646158501
-
Natural antisense transcripts: Sound or silence?
-
Werner A, Berdal A (2005) Natural antisense transcripts: Sound or silence? Physiol Genomics 23:125-131
-
(2005)
Physiol Genomics
, vol.23
, pp. 125-131
-
-
Werner, A.1
Berdal, A.2
-
191
-
-
0035370526
-
Spliceosomal UsnRNP biogenesis, structure and function
-
Will CL, Lührmann R (2001) Spliceosomal UsnRNP biogenesis, structure and function. Curr Opin Cell Biol 13:290-301
-
(2001)
Curr Opin Cell Biol
, vol.13
, pp. 290-301
-
-
Will, C.L.1
Lührmann, R.2
-
192
-
-
26844431946
-
Splicing of a rare class of introns by the U12-dependent spliceosome
-
Will CL, Lührmann R (2005) Splicing of a rare class of introns by the U12-dependent spliceosome. Biol Chem 386:713-724
-
(2005)
Biol Chem
, vol.386
, pp. 713-724
-
-
Will, C.L.1
Lührmann, R.2
-
193
-
-
20644454175
-
Manifestations of multicellularity: Dictyostelium reports in
-
Williams JG, Noegel AA, Eichinger L (2005) Manifestations of multicellularity: Dictyostelium reports in. Trends Genet 21:392-398
-
(2005)
Trends Genet
, vol.21
, pp. 392-398
-
-
Williams, J.G.1
Noegel, A.A.2
Eichinger, L.3
-
194
-
-
0019203130
-
Dictyostelium small nuclear RNA D2 is homologous to rat nucleolar RNA U3 and is encoded by a dispersed multigene family
-
Wise JA, Weiner AM (1980) Dictyostelium small nuclear RNA D2 is homologous to rat nucleolar RNA U3 and is encoded by a dispersed multigene family. Cell 22:109-118
-
(1980)
Cell
, vol.22
, pp. 109-118
-
-
Wise, J.A.1
Weiner, A.M.2
-
195
-
-
0019887678
-
The small nuclear RNAs of the cellular slime mold Dictyostelium discoideum
-
Wise JA, Weiner AM (1981) The small nuclear RNAs of the cellular slime mold Dictyostelium discoideum. J Biol Chem 256:956-963
-
(1981)
J Biol Chem
, vol.256
, pp. 956-963
-
-
Wise, J.A.1
Weiner, A.M.2
-
196
-
-
13744262101
-
Identification of 20 snoRNA-like RNAs from the primitive eukaryote, Giardia lamblia
-
Yang C-Y, Zhou H, Luo J, Qu L-H (2005) Identification of 20 snoRNA-like RNAs from the primitive eukaryote, Giardia lamblia. Biochem Biophys Res Commun 328:1224-1231
-
(2005)
Biochem Biophys Res Commun
, vol.328
, pp. 1224-1231
-
-
Yang, C.-Y.1
Zhou, H.2
Luo, J.3
Qu, L.-H.4
-
197
-
-
0025763969
-
DC6, a novel type of Dictyostelium discoideum gene regulated by secreted factors but not by cAMP
-
Yoshida H, Yamada Y, Okamoto K (1991) DC6, a novel type of Dictyostelium discoideum gene regulated by secreted factors but not by cAMP. Differentiation 46:161-166
-
(1991)
Differentiation
, vol.46
, pp. 161-166
-
-
Yoshida, H.1
Yamada, Y.2
Okamoto, K.3
-
198
-
-
0028229882
-
Duta RNA functions as an untranslatable RNA in the development of Dictyostelium discoideum
-
Yoshida H, Kumimoto H, Okamoto K (1994) dutA RNA functions as an untranslatable RNA in the development of Dictyostelium discoideum. Nucleic Acids Res 22:41-46
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 41-46
-
-
Yoshida, H.1
Kumimoto, H.2
Okamoto, K.3
-
199
-
-
0000996356
-
The growing World of small nuclear ribonucleoproteins
-
In: Gesteland RF, Cech TR, Atkins JF (eds) 2nd edn. Cold Spring Harbor Laboratory Press, New York
-
Yu Y-T, Scharl EC, Smith CM, Steitz JA (1999) The growing World of small nuclear ribonucleoproteins. In: Gesteland RF, Cech TR, Atkins JF (eds) The RNA World, 2nd edn. Cold Spring Harbor Laboratory Press, New York, pp 487-524
-
(1999)
The RNA World
, pp. 487-524
-
-
Yu, Y.-T.1
Scharl, E.C.2
Smith, C.M.3
Steitz, J.A.4
-
200
-
-
0038719826
-
RNomics in Drosophila melanogaster: Identification of 66 candidates for novel non-messenger RNAs
-
Yuan G, Klambt C, Bachellerie JP, Brosius J, Hüttenhofer A (2003) RNomics in Drosophila melanogaster: Identification of 66 candidates for novel non-messenger RNAs. Nucleic Acids Res 31:2495-2507
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2495-2507
-
-
Yuan, G.1
Klambt, C.2
Bachellerie, J.P.3
Brosius, J.4
Hüttenhofer, A.5
-
201
-
-
22044445814
-
Plant 7SL RNA genes belong to type 4 of RNA polymerase III-dependent genes that are composed of mixed promoters
-
Yukawa Y et al (2005) Plant 7SL RNA genes belong to type 4 of RNA polymerase III-dependent genes that are composed of mixed promoters. Plant J 43:97-106
-
(2005)
Plant J
, vol.43
, pp. 97-106
-
-
Yukawa, Y.1
-
202
-
-
24644446398
-
Ribo-gnome: The big world of small RNAs
-
Zamore PD, Haley B (2005) Ribo-gnome: The big world of small RNAs. Science 309:1519-1524
-
(2005)
Science
, vol.309
, pp. 1519-1524
-
-
Zamore, P.D.1
Haley, B.2
-
203
-
-
0034737298
-
RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals
-
Zamore PD, Tuschl T, Sharp PA, Bartel DP (2000) RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals. Cell 101:25-33
-
(2000)
Cell
, vol.101
, pp. 25-33
-
-
Zamore, P.D.1
Tuschl, T.2
Sharp, P.A.3
Bartel, D.P.4
-
204
-
-
33646922629
-
Evolution of small nucleolar RNAs in nematodes
-
Zemann A, op de Bekke A, Kiefmann M, Brosius J, Schmitz J (2006) Evolution of small nucleolar RNAs in nematodes. Nucl. Acids Res 34:2676-2685
-
(2006)
Nucl. Acids Res
, vol.34
, pp. 2676-2685
-
-
Zemann, A.1
op de Bekke, A.2
Kiefmann, M.3
Brosius, J.4
Schmitz, J.5
-
205
-
-
0019457902
-
Two groups of small stable RNAs
-
Zieve GW (1981) Two groups of small stable RNAs. Cell 25:296
-
(1981)
Cell
, vol.25
, pp. 296
-
-
Zieve, G.W.1
|