Non-coding snoRNA host genes in Drosophila: Expression strategies for modification guide snoRNAs

European Journal of Cell Biology

Volumn 80, Issue 2, 2001, Pages 119-125

  Tycowski, Kazimierz T ^a   Steitz, Joan A ^a  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Guide RNA; RNA modification; SnoRNA host gene; TOP sequence

Indexed keywords

NUCLEOTIDE; PROTEIN; PYRIMIDINE; SMALL NUCLEOLAR RNA;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; GENE EXPRESSION; GENE LOCATION; GENETIC CODE; GENETIC CONSERVATION; GENETIC ORGANIZATION; GENETIC STABILITY; HOST; INTRON; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RNA PROCESSING; RNA SEQUENCE; RNA SPLICING; TRANSCRIPTION INITIATION;

ANIMALIA; DROSOPHILA; DROSOPHILA MELANOGASTER; EUKARYOTA; MELANOGASTER; VERTEBRATA;

EID: 0035109393     PISSN: 01719335     EISSN: None     Source Type: Journal    
DOI: 10.1078/0171-9335-00150     Document Type: Article

References (41)

1. Functions of the exosome in rRNA, snoRNA and snRNA synthesis
2. TOP genes: A translationally controlled class of genes including those coding for ribosomal proteins
3. Human U19 intron-encoded snoRNA is processed from a long primary transcript that possesses little potential for protein coding
4. In vitro study of processing of the intron-encoded U16 small nucleolar RNA in Xenopus laevis
5. Processing of the intron-encoded U16 and U18 snoRNAs: The conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA
6. Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism
7. Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1
8. Processing of eukaryotic ribosomal RNA
9. RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site
10. Nucleolar factors direct the 2′-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA
11. Minifly, a Drosophila gene required for ribosome biogenesis
12. Functional dissection of a mouse ribosomal protein promoter: Significance of the polypyrimidine initiator and an element in the TATA-box region
13. X-linked dyskeratosis congenita is caused by mutations in a highly conserved gene with putative nucleolar functions
14. Two genes encode related cytoplasmic elongation factors 1 alpha (EF-1 alpha) in Drosophila melanogaster with continuous and stage specific expression
15. Translational initiation factor expression and ribosomal protein gene expression are repressed coordinately but by different mechanisms in murine lymphosarcoma cells treated with glucocorticoids
16. U14 snoRNAs are encoded in introns of human ribosomal protein S13 gene
17. The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase
18. Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAs
19. Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene
20. A computational screen for methylation guide snoRNAs in yeast
21. The numerous modified nucleotides in eukaryotic ribosomal RNA
22. Pseudouridine mapping in the Saccharomyces cerevisiae spliceosomal U small nuclear RNAs (snRNAs) reveals that pseudouridine synthase pus1p exhibits a dual substrate specificity for U2 snRNA and tRNA
23. The small nucleolar RNAs
24. Erratum
25. NAP57, a mammalian nucleolar protein with a putative homolog in yeast and bacteria
26. Translational control of ribosomal protein mRNAs in Eukaryotes
27. Intronic snoRNA biosynthesis in Saccharomyces cerevisiae depends on the lariat-debranching enzyme: Intron length effects and activity of a precursor snoRNA
28. RNA processing: Pocket guides to ribosomal RNA
29. Ribosomal RNA: Small nucleolar RNAs make their mark
30. The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5′-terminal oligopyrimidine gene family
31. Processing of the precursors to small nucleolar RNAs and rRNAs requires common components
32. The Nop60B gene of Drosophila encodes an essential nucleolar protein that functions in yeast
33. SnoRNA U21 is also intron-encoded in Drosophila melanogaster but in a different host-gene as compared to warm-blooded vertebrates
34. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5′-terminal oligopyrimidine gene family reveals common features of snoRNA host genes
35. Sno storm in the nucleolus: New roles for myriad small RNPs
36. A mammalian gene with introns instead of exons generating stable RNA products
37. A small nucleolar RNA is processed from an intron of the human gene encoding ribosomal protein S3
38. Modification of U6 spliceosomal RNA is guided by other small RNAs
39. Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activities
40. Guided tours: From precursor snoRNA to functional snoRNP
41. Point mutations in yeast CBF5 can abolish in vivo pseudouridylation of rRNA