메뉴 건너뛰기




Volumn 171, Issue 2, 2017, Pages 287-304.e15

Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome

(113)  Bowman, John L a   Kohchi, Takayuki b   Yamato, Katsuyuki T c   Jenkins, Jerry d,e   Shu, Shengqiang d   Ishizaki, Kimitsune f   Yamaoka, Shohei b   Nishihama, Ryuichi b   Nakamura, Yasukazu g   Berger, Frédéric h   Adam, Catherine d   Aki, Shiori Sugamata i   Althoff, Felix j   Araki, Takashi b   Arteaga Vazquez, Mario A k   Balasubrmanian, Sureshkumar a   Barry, Kerrie d   Bauer, Diane d   Boehm, Christian R l   Briginshaw, Liam a   more..


Author keywords

auxin; charophycean algae; land plant evolution; Marchantia polymorpha; sex chromosome

Indexed keywords

ABSCISIC ACID; REPETITIVE DNA; TRANSCRIPTION FACTOR;

EID: 85030527411     PISSN: 00928674     EISSN: 10974172     Source Type: Journal    
DOI: 10.1016/j.cell.2017.09.030     Document Type: Article
Times cited : (849)

References (171)
  • 1
    • 84904479962 scopus 로고    scopus 로고
    • Abscisic acid-induced rearrangement of intracellular structures associated with freezing and desiccation stress tolerance in the liverwort Marchantia polymorpha
    • Akter, K., Kato, M., Sato, Y., Kaneko, Y., Takezawa, D., Abscisic acid-induced rearrangement of intracellular structures associated with freezing and desiccation stress tolerance in the liverwort Marchantia polymorpha. J. Plant Physiol. 171 (2014), 1334–1343.
    • (2014) J. Plant Physiol. , vol.171 , pp. 1334-1343
    • Akter, K.1    Kato, M.2    Sato, Y.3    Kaneko, Y.4    Takezawa, D.5
  • 3
    • 0001255423 scopus 로고
    • A chromosome difference correlated with sex differences in sphærocarpos
    • Allen, C.E., A chromosome difference correlated with sex differences in sphærocarpos. Science 46 (1917), 466–467.
    • (1917) Science , vol.46 , pp. 466-467
    • Allen, C.E.1
  • 4
    • 84964885207 scopus 로고
    • The Occurrence of Polyploidy in Sphaerocarpos
    • Allen, C.E., The Occurrence of Polyploidy in Sphaerocarpos. Am. J. Bot. 22 (1935), 664–680.
    • (1935) Am. J. Bot. , vol.22 , pp. 664-680
    • Allen, C.E.1
  • 7
    • 84996192056 scopus 로고
    • The chromosome numbers of liverworts (Hepaticae and Anthocerotae)
    • Berrie, G.K., The chromosome numbers of liverworts (Hepaticae and Anthocerotae). Trans. Brit. Bryol. Soc. 3 (1960), 688–705.
    • (1960) Trans. Brit. Bryol. Soc. , vol.3 , pp. 688-705
    • Berrie, G.K.1
  • 8
    • 0039950014 scopus 로고
    • Experimental Studies on Polyploidy in Liverworts I. The Riccia fluitans Complex
    • Berrie, G.K., Experimental Studies on Polyploidy in Liverworts I. The Riccia fluitans Complex. Bryologist 67 (1964), 146–152.
    • (1964) Bryologist , vol.67 , pp. 146-152
    • Berrie, G.K.1
  • 9
    • 0035875867 scopus 로고    scopus 로고
    • Dosage-dependent gene regulation in multicellular eukaryotes: implications for dosage compensation, aneuploid syndromes, and quantitative traits
    • Birchler, J.A., Bhadra, U., Bhadra, M.P., Auger, D.L., Dosage-dependent gene regulation in multicellular eukaryotes: implications for dosage compensation, aneuploid syndromes, and quantitative traits. Dev. Biol. 234 (2001), 275–288.
    • (2001) Dev. Biol. , vol.234 , pp. 275-288
    • Birchler, J.A.1    Bhadra, U.2    Bhadra, M.P.3    Auger, D.L.4
  • 11
    • 0003959750 scopus 로고
    • Origin of a land flora: a theory based on the facts of alternation
    • MacMillan and Co. London
    • Bower, F.O., Origin of a land flora: a theory based on the facts of alternation. 1908, MacMillan and Co., London.
    • (1908)
    • Bower, F.O.1
  • 12
    • 84964863415 scopus 로고    scopus 로고
    • A Brief History of Marchantia from Greece to Genomics
    • Bowman, J.L., A Brief History of Marchantia from Greece to Genomics. Plant Cell Physiol. 57 (2016), 210–229.
    • (2016) Plant Cell Physiol. , vol.57 , pp. 210-229
    • Bowman, J.L.1
  • 15
    • 0002828825 scopus 로고
    • Polar organizers mark division axis prior to preprophase band formation in mitosis of the hepatic Reboulia hemisphaerica (Bryophyta)
    • Brown, R.C., Lemmon, B.E., Polar organizers mark division axis prior to preprophase band formation in mitosis of the hepatic Reboulia hemisphaerica (Bryophyta). Protoplasma 156 (1990), 74–81.
    • (1990) Protoplasma , vol.156 , pp. 74-81
    • Brown, R.C.1    Lemmon, B.E.2
  • 16
    • 84999040357 scopus 로고    scopus 로고
    • Plasmodesmata enable multicellularity: new insights into their evolution, biogenesis, and functions in development and immunity
    • Brunkard, J.O., Zambryski, P.C., Plasmodesmata enable multicellularity: new insights into their evolution, biogenesis, and functions in development and immunity. Curr. Opin. Plant Biol. 35 (2017), 76–83.
    • (2017) Curr. Opin. Plant Biol. , vol.35 , pp. 76-83
    • Brunkard, J.O.1    Zambryski, P.C.2
  • 17
    • 0008556126 scopus 로고
    • Sex Chromosomes in Haploid Dioecy- A Unique Contrast to Muller's Theory for Diploid Dioecy
    • Bull, J.J., Sex Chromosomes in Haploid Dioecy- A Unique Contrast to Muller's Theory for Diploid Dioecy. Am. Nat. 112 (1978), 245–250.
    • (1978) Am. Nat. , vol.112 , pp. 245-250
    • Bull, J.J.1
  • 18
    • 84954120300 scopus 로고    scopus 로고
    • Microtubule dynamics of the centrosome-like polar organizers from the basal land plant Marchantia polymorpha
    • Buschmann, H., Holtmannspötter, M., Borchers, A., O'Donoghue, M.T., Zachgo, S., Microtubule dynamics of the centrosome-like polar organizers from the basal land plant Marchantia polymorpha. New Phytol. 209 (2016), 999–1013.
    • (2016) New Phytol. , vol.209 , pp. 999-1013
    • Buschmann, H.1    Holtmannspötter, M.2    Borchers, A.3    O'Donoghue, M.T.4    Zachgo, S.5
  • 19
    • 0000970706 scopus 로고
    • Gas Chromatographic-Mass Spectrometric Studies of Long-Chain Hydroxy-Acids 0.7. Cutin Acids from Bryophytes - Omega-1 Hydroxy Alkanoic Acid in 2 Liverwort Species
    • Caldicott, A.B., Eglinton, G., Gas Chromatographic-Mass Spectrometric Studies of Long-Chain Hydroxy-Acids 0.7. Cutin Acids from Bryophytes - Omega-1 Hydroxy Alkanoic Acid in 2 Liverwort Species. Phytochemistry 15 (1976), 1139–1143.
    • (1976) Phytochemistry , vol.15 , pp. 1139-1143
    • Caldicott, A.B.1    Eglinton, G.2
  • 20
    • 84926095890 scopus 로고
    • Mosses and Ferns
    • 2nd ed. The Macmillan Company New York
    • Campbell, D.H., Mosses and Ferns. 2nd ed., 1918, The Macmillan Company, New York.
    • (1918)
    • Campbell, D.H.1
  • 21
    • 84994501833 scopus 로고    scopus 로고
    • The Stepwise Increase in the Number of Transcription Factor Families in the Precambrian Predated the Diversification of Plants On Land
    • Catarino, B., Hetherington, A.J., Emms, D.M., Kelly, S., Dolan, L., The Stepwise Increase in the Number of Transcription Factor Families in the Precambrian Predated the Diversification of Plants On Land. Mol. Biol. Evol. 33 (2016), 2815–2819.
    • (2016) Mol. Biol. Evol. , vol.33 , pp. 2815-2819
    • Catarino, B.1    Hetherington, A.J.2    Emms, D.M.3    Kelly, S.4    Dolan, L.5
  • 22
    • 33644787447 scopus 로고    scopus 로고
    • OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
    • Chen, F., Mackey, A.J., Stoeckert, C.J. Jr., Roos, D.S., OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups. Nucleic Acids Res. 34 (2006), D363–D368.
    • (2006) Nucleic Acids Res. , vol.34 , pp. D363-D368
    • Chen, F.1    Mackey, A.J.2    Stoeckert, C.J.3    Roos, D.S.4
  • 25
    • 0031751579 scopus 로고    scopus 로고
    • Structural similarities between surface layers of selected charophycean algae and bryophytes and the cuticles of vascular plants
    • Cook, M.E., Graham, L.E., Structural similarities between surface layers of selected charophycean algae and bryophytes and the cuticles of vascular plants. Int. J. Plant Sci. 159 (1998), 780–787.
    • (1998) Int. J. Plant Sci. , vol.159 , pp. 780-787
    • Cook, M.E.1    Graham, L.E.2
  • 26
    • 85030566288 scopus 로고    scopus 로고
    • Green algal transcriptomes for phylogenetics and comparative genomics
    • figshare.
    • Cooper, E., and Delwiche, C. (2016). Green algal transcriptomes for phylogenetics and comparative genomics. figshare. https://figshare.com/articles/Green_algal_transcriptomes_for_phylogenetics_and_comparative_genomics/1604778.
    • (2016)
    • Cooper, E.1    Delwiche, C.2
  • 27
    • 84954551949 scopus 로고    scopus 로고
    • PpASCL, the Physcomitrella patens Anther-Specific Chalcone Synthase-Like Enzyme Implicated in Sporopollenin Biosynthesis, Is Needed for Integrity of the Moss Spore Wall and Spore Viability
    • Daku, R.M., Rabbi, F., Buttigieg, J., Coulson, I.M., Horne, D., Martens, G., Ashton, N.W., Suh, D.Y., PpASCL, the Physcomitrella patens Anther-Specific Chalcone Synthase-Like Enzyme Implicated in Sporopollenin Biosynthesis, Is Needed for Integrity of the Moss Spore Wall and Spore Viability. PLoS ONE, 11, 2016, e0146817.
    • (2016) PLoS ONE , vol.11 , pp. e0146817
    • Daku, R.M.1    Rabbi, F.2    Buttigieg, J.3    Coulson, I.M.4    Horne, D.5    Martens, G.6    Ashton, N.W.7    Suh, D.Y.8
  • 30
    • 84943412492 scopus 로고    scopus 로고
    • The Evolutionary Origin of a Terrestrial Flora
    • Delwiche, C.F., Cooper, E.D., The Evolutionary Origin of a Terrestrial Flora. Curr. Biol. 25 (2015), R899–R910.
    • (2015) Curr. Biol. , vol.25 , pp. R899-R910
    • Delwiche, C.F.1    Cooper, E.D.2
  • 34
    • 84930945498 scopus 로고    scopus 로고
    • The Evolutionary History of R2R3-MYB Proteins Across 50 Eukaryotes: New Insights Into Subfamily Classification and Expansion
    • Du, H., Liang, Z., Zhao, S., Nan, M.G., Tran, L.S.P., Lu, K., Huang, Y.B., Li, J.N., The Evolutionary History of R2R3-MYB Proteins Across 50 Eukaryotes: New Insights Into Subfamily Classification and Expansion. Sci. Rep., 5, 2015, 11037.
    • (2015) Sci. Rep. , vol.5 , pp. 11037
    • Du, H.1    Liang, Z.2    Zhao, S.3    Nan, M.G.4    Tran, L.S.P.5    Lu, K.6    Huang, Y.B.7    Li, J.N.8
  • 36
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar, R.C., MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32 (2004), 1792–1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 37
    • 70349682921 scopus 로고    scopus 로고
    • Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes
    • Edger, P.P., Pires, J.C., Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes. Chromosome Res. 17 (2009), 699–717.
    • (2009) Chromosome Res. , vol.17 , pp. 699-717
    • Edger, P.P.1    Pires, J.C.2
  • 38
    • 0028975258 scopus 로고
    • Hepatic Characters in the Earliest Land Plants
    • Edwards, D., Duckett, J.G., Richardson, J.B., Hepatic Characters in the Earliest Land Plants. Nature 374 (1995), 635–636.
    • (1995) Nature , vol.374 , pp. 635-636
    • Edwards, D.1    Duckett, J.G.2    Richardson, J.B.3
  • 41
    • 39749179047 scopus 로고    scopus 로고
    • LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
    • Ellinghaus, D., Kurtz, S., Willhoeft, U., LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons. BMC Bioinformatics, 9, 2008, 18.
    • (2008) BMC Bioinformatics , vol.9 , pp. 18
    • Ellinghaus, D.1    Kurtz, S.2    Willhoeft, U.3
  • 42
    • 63349084133 scopus 로고    scopus 로고
    • A horizontal gene transfer at the origin of phenylpropanoid metabolism: a key adaptation of plants to land
    • Emiliani, G., Fondi, M., Fani, R., Gribaldo, S., A horizontal gene transfer at the origin of phenylpropanoid metabolism: a key adaptation of plants to land. Biol. Direct, 4, 2009, 7.
    • (2009) Biol. Direct , vol.4 , pp. 7
    • Emiliani, G.1    Fondi, M.2    Fani, R.3    Gribaldo, S.4
  • 43
    • 9744270364 scopus 로고
    • On Spore-Formation and Nuclear Division in the Hepaticae
    • Farmer, J.B., On Spore-Formation and Nuclear Division in the Hepaticae. Ann. Bot. (Lond.) 9 (1895), 469–523.
    • (1895) Ann. Bot. (Lond.) , vol.9 , pp. 469-523
    • Farmer, J.B.1
  • 44
    • 84919683107 scopus 로고    scopus 로고
    • First evidence of mutualism between ancient plant lineages (Haplomitriopsida liverworts) and Mucoromycotina fungi and its response to simulated Palaeozoic changes in atmospheric CO2
    • Field, K.J., Rimington, W.R., Bidartondo, M.I., Allinson, K.E., Beerling, D.J., Cameron, D.D., Duckett, J.G., Leake, J.R., Pressel, S., First evidence of mutualism between ancient plant lineages (Haplomitriopsida liverworts) and Mucoromycotina fungi and its response to simulated Palaeozoic changes in atmospheric CO2. New Phytol. 205 (2015), 743–756.
    • (2015) New Phytol. , vol.205 , pp. 743-756
    • Field, K.J.1    Rimington, W.R.2    Bidartondo, M.I.3    Allinson, K.E.4    Beerling, D.J.5    Cameron, D.D.6    Duckett, J.G.7    Leake, J.R.8    Pressel, S.9
  • 46
    • 84930800851 scopus 로고    scopus 로고
    • A Simple Auxin Transcriptional Response System Regulates Multiple Morphogenetic Processes in the Liverwort Marchantia polymorpha
    • Flores-Sandoval, E., Eklund, D.M., Bowman, J.L., A Simple Auxin Transcriptional Response System Regulates Multiple Morphogenetic Processes in the Liverwort Marchantia polymorpha. PLoS Genet., 11, 2015, e1005207.
    • (2015) PLoS Genet. , vol.11 , pp. e1005207
    • Flores-Sandoval, E.1    Eklund, D.M.2    Bowman, J.L.3
  • 47
    • 84964852740 scopus 로고    scopus 로고
    • Efficient and Inducible Use of Artificial MicroRNAs in Marchantia polymorpha
    • Flores-Sandoval, E., Dierschke, T., Fisher, T.J., Bowman, J.L., Efficient and Inducible Use of Artificial MicroRNAs in Marchantia polymorpha. Plant Cell Physiol. 57 (2016), 281–290.
    • (2016) Plant Cell Physiol. , vol.57 , pp. 281-290
    • Flores-Sandoval, E.1    Dierschke, T.2    Fisher, T.J.3    Bowman, J.L.4
  • 48
    • 33846187675 scopus 로고    scopus 로고
    • The ancestral developmental tool kit of land plants
    • Floyd, S.K., Bowman, J.L., The ancestral developmental tool kit of land plants. Int. J. Plant Sci. 168 (2007), 1–35.
    • (2007) Int. J. Plant Sci. , vol.168 , pp. 1-35
    • Floyd, S.K.1    Bowman, J.L.2
  • 49
    • 79957886185 scopus 로고    scopus 로고
    • The evolution of RNA editing and pentatricopeptide repeat genes
    • Fujii, S., Small, I., The evolution of RNA editing and pentatricopeptide repeat genes. New Phytol. 191 (2011), 37–47.
    • (2011) New Phytol. , vol.191 , pp. 37-47
    • Fujii, S.1    Small, I.2
  • 50
    • 0035671697 scopus 로고    scopus 로고
    • Isolation of X and Y chromosome-specific DNA markers from a liverwort, Marchantia polymorpha, by representational difference analysis
    • Fujisawa, M., Hayashi, K., Nishio, T., Bando, T., Okada, S., Yamato, K.T., Fukuzawa, H., Ohyama, K., Isolation of X and Y chromosome-specific DNA markers from a liverwort, Marchantia polymorpha, by representational difference analysis. Genetics 159 (2001), 981–985.
    • (2001) Genetics , vol.159 , pp. 981-985
    • Fujisawa, M.1    Hayashi, K.2    Nishio, T.3    Bando, T.4    Okada, S.5    Yamato, K.T.6    Fukuzawa, H.7    Ohyama, K.8
  • 51
    • 0033634664 scopus 로고    scopus 로고
    • FLS2: an LRR receptor-like kinase involved in the perception of the bacterial elicitor flagellin in Arabidopsis
    • Gómez-Gómez, L., Boller, T., FLS2: an LRR receptor-like kinase involved in the perception of the bacterial elicitor flagellin in Arabidopsis. Mol. Cell 5 (2000), 1003–1011.
    • (2000) Mol. Cell , vol.5 , pp. 1003-1011
    • Gómez-Gómez, L.1    Boller, T.2
  • 53
    • 12344335569 scopus 로고    scopus 로고
    • DAGchainer: a tool for mining segmental genome duplications and synteny
    • Haas, B.J., Delcher, A.L., Wortman, J.R., Salzberg, S.L., DAGchainer: a tool for mining segmental genome duplications and synteny. Bioinformatics 20 (2004), 3643–3646.
    • (2004) Bioinformatics , vol.20 , pp. 3643-3646
    • Haas, B.J.1    Delcher, A.L.2    Wortman, J.R.3    Salzberg, S.L.4
  • 54
    • 57749085421 scopus 로고    scopus 로고
    • Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli
    • Hanada, K., Zou, C., Lehti-Shiu, M.D., Shinozaki, K., Shiu, S.H., Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli. Plant Physiol. 148 (2008), 993–1003.
    • (2008) Plant Physiol. , vol.148 , pp. 993-1003
    • Hanada, K.1    Zou, C.2    Lehti-Shiu, M.D.3    Shinozaki, K.4    Shiu, S.H.5
  • 55
    • 84958055274 scopus 로고    scopus 로고
    • Why Plants Were Terrestrial from the Beginning
    • Harholt, J., Moestrup, Ø., Ulvskov, P., Why Plants Were Terrestrial from the Beginning. Trends Plant Sci. 21 (2016), 96–101.
    • (2016) Trends Plant Sci. , vol.21 , pp. 96-101
    • Harholt, J.1    Moestrup, Ø.2    Ulvskov, P.3
  • 56
    • 34347197269 scopus 로고
    • Beiträge zur Zytologie der Gattung Marchantia I
    • Haupt, G., Beiträge zur Zytologie der Gattung Marchantia I. Z. Indukt. Abstamm. Vererbungsl. 62 (1932), 367–428.
    • (1932) Z. Indukt. Abstamm. Vererbungsl. , vol.62 , pp. 367-428
    • Haupt, G.1
  • 58
    • 84960089630 scopus 로고    scopus 로고
    • BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS
    • Hoff, K.J., Lange, S., Lomsadze, A., Borodovsky, M., Stanke, M., BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS. Bioinformatics 32 (2016), 767–769.
    • (2016) Bioinformatics , vol.32 , pp. 767-769
    • Hoff, K.J.1    Lange, S.2    Lomsadze, A.3    Borodovsky, M.4    Stanke, M.5
  • 59
    • 0003413451 scopus 로고
    • On the germination, development, and fructification of the higher Cryptogamia, and on the fructification of the Coniferae
    • Ray Society London
    • Hofmeister, W.F.B., On the germination, development, and fructification of the higher Cryptogamia, and on the fructification of the Coniferae. 1862, Ray Society, London.
    • (1862)
    • Hofmeister, W.F.B.1
  • 60
    • 84864485913 scopus 로고    scopus 로고
    • Demethylesterification of the primary wall by PECTIN METHYLESTERASE35 provides mechanical support to the Arabidopsis stem
    • Hongo, S., Sato, K., Yokoyama, R., Nishitani, K., Demethylesterification of the primary wall by PECTIN METHYLESTERASE35 provides mechanical support to the Arabidopsis stem. Plant Cell 24 (2012), 2624–2634.
    • (2012) Plant Cell , vol.24 , pp. 2624-2634
    • Hongo, S.1    Sato, K.2    Yokoyama, R.3    Nishitani, K.4
  • 62
    • 84964914976 scopus 로고    scopus 로고
    • Molecular Genetic Tools and Techniques for Marchantia polymorpha Research
    • Ishizaki, K., Nishihama, R., Yamato, K.T., Kohchi, T., Molecular Genetic Tools and Techniques for Marchantia polymorpha Research. Plant Cell Physiol. 57 (2016), 262–270.
    • (2016) Plant Cell Physiol. , vol.57 , pp. 262-270
    • Ishizaki, K.1    Nishihama, R.2    Yamato, K.T.3    Kohchi, T.4
  • 66
    • 84930798009 scopus 로고    scopus 로고
    • Auxin-Mediated Transcriptional System with a Minimal Set of Components Is Critical for Morphogenesis through the Life Cycle in Marchantia polymorpha
    • Kato, H., Ishizaki, K., Kouno, M., Shirakawa, M., Bowman, J.L., Nishihama, R., Kohchi, T., Auxin-Mediated Transcriptional System with a Minimal Set of Components Is Critical for Morphogenesis through the Life Cycle in Marchantia polymorpha. PLoS Genet., 11, 2015, e1005084.
    • (2015) PLoS Genet. , vol.11 , pp. e1005084
    • Kato, H.1    Ishizaki, K.2    Kouno, M.3    Shirakawa, M.4    Bowman, J.L.5    Nishihama, R.6    Kohchi, T.7
  • 67
    • 0036226603 scopus 로고    scopus 로고
    • BLAT-the BLAST-like alignment tool
    • Kent, W.J., BLAT-the BLAST-like alignment tool. Genome Res. 12 (2002), 656–664.
    • (2002) Genome Res. , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 68
    • 85030529160 scopus 로고    scopus 로고
    • (2011)
    • Taxonomic identification of chloroplast genome of Marchantia polymorpha using DNA barcode sequences. In Fourth International Barcode of Life Conference, pp. A43.
    • Kisiel, K., Miwa, H., and Odrzykoski, I.J. (2011). Taxonomic identification of chloroplast genome of Marchantia polymorpha using DNA barcode sequences. In Fourth International Barcode of Life Conference, pp. A43.
    • Kisiel, K.1    Miwa, H.2    Odrzykoski, I.J.3
  • 71
    • 34249734822 scopus 로고    scopus 로고
    • Gepard: a rapid and sensitive tool for creating dotplots on genome scale
    • Krumsiek, J., Arnold, R., Rattei, T., Gepard: a rapid and sensitive tool for creating dotplots on genome scale. Bioinformatics 23 (2007), 1026–1028.
    • (2007) Bioinformatics , vol.23 , pp. 1026-1028
    • Krumsiek, J.1    Arnold, R.2    Rattei, T.3
  • 73
    • 0027951157 scopus 로고
    • Riccionidins a and b, anthocyanidins from the cell walls of the liverwort Ricciocarpos natans
    • Kunz, S., Burkhardt, G., Becker, H., Riccionidins a and b, anthocyanidins from the cell walls of the liverwort Ricciocarpos natans. Phytochemistry 35 (1993), 233–235.
    • (1993) Phytochemistry , vol.35 , pp. 233-235
    • Kunz, S.1    Burkhardt, G.2    Becker, H.3
  • 76
    • 2142735678 scopus 로고
    • Auxin Inhibition in the Liverwort Lunularia
    • LaRue, C.D., Narayanaswami, S., Auxin Inhibition in the Liverwort Lunularia. New Phytol. 56 (1957), 61–70.
    • (1957) New Phytol. , vol.56 , pp. 61-70
    • LaRue, C.D.1    Narayanaswami, S.2
  • 77
    • 84865071857 scopus 로고    scopus 로고
    • Diversity, classification and function of the plant protein kinase superfamily
    • Lehti-Shiu, M.D., Shiu, S.H., Diversity, classification and function of the plant protein kinase superfamily. Philos. Trans. R. Soc. Lond. B Biol. Sci. 367 (2012), 2619–2639.
    • (2012) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.367 , pp. 2619-2639
    • Lehti-Shiu, M.D.1    Shiu, S.H.2
  • 78
    • 85004010418 scopus 로고    scopus 로고
    • Diversity, expansion, and evolutionary novelty of plant DNA-binding transcription factor families
    • Lehti-Shiu, M.D., Panchy, N., Wang, P., Uygun, S., Shiu, S.-H., Diversity, expansion, and evolutionary novelty of plant DNA-binding transcription factor families. Biochim. Biophys. Acta. 1860 (2017), 3–20.
    • (2017) Biochim. Biophys. Acta. , vol.1860 , pp. 3-20
    • Lehti-Shiu, M.D.1    Panchy, N.2    Wang, P.3    Uygun, S.4    Shiu, S.-H.5
  • 79
    • 77952670452 scopus 로고    scopus 로고
    • Identifying repeats and transposable elements in sequenced genomes: how to find your way through the dense forest of programs
    • Lerat, E., Identifying repeats and transposable elements in sequenced genomes: how to find your way through the dense forest of programs. Heredity (Edinb) 104 (2010), 520–533.
    • (2010) Heredity (Edinb) , vol.104 , pp. 520-533
    • Lerat, E.1
  • 80
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li, H., Durbin, R., Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25 (2009), 1754–1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 81
    • 0028041998 scopus 로고
    • Abscisic-Acid Is Present in Liverworts
    • Li, X., Wurtele, E.S., Lamotte, C.E., Abscisic-Acid Is Present in Liverworts. Phytochemistry 37 (1994), 625–627.
    • (1994) Phytochemistry , vol.37 , pp. 625-627
    • Li, X.1    Wurtele, E.S.2    Lamotte, C.E.3
  • 82
    • 0141519279 scopus 로고    scopus 로고
    • OrthoMCL: identification of ortholog groups for eukaryotic genomes
    • Li, L., Stoeckert, C.J. Jr., Roos, D.S., OrthoMCL: identification of ortholog groups for eukaryotic genomes. Genome Res. 13 (2003), 2178–2189.
    • (2003) Genome Res. , vol.13 , pp. 2178-2189
    • Li, L.1    Stoeckert, C.J.2    Roos, D.S.3
  • 87
    • 0343710420 scopus 로고
    • Untersuchungen über Reduktionsteilung und Geschlechtsbestimmung bei Lebermoosen
    • Lorbeer, G., Untersuchungen über Reduktionsteilung und Geschlechtsbestimmung bei Lebermoosen. Z. Indukt. Abstamm. Vererbungsl. 44 (1927), 1–109.
    • (1927) Z. Indukt. Abstamm. Vererbungsl. , vol.44 , pp. 1-109
    • Lorbeer, G.1
  • 88
    • 57749096814 scopus 로고    scopus 로고
    • The value of nonmodel genomes and an example using SynMap within CoGe to dissect the hexaploidy that predates the rosids
    • Lyons, E., Pedersen, B., Kane, J., Freeling, M., The value of nonmodel genomes and an example using SynMap within CoGe to dissect the hexaploidy that predates the rosids. Trop. Plant Biol. 1 (2008), 181–190.
    • (2008) Trop. Plant Biol. , vol.1 , pp. 181-190
    • Lyons, E.1    Pedersen, B.2    Kane, J.3    Freeling, M.4
  • 89
    • 4344699457 scopus 로고    scopus 로고
    • ‘Why polyploidy is rarer in animals than in plants': myths and mechanisms
    • Mable, B.K., ‘Why polyploidy is rarer in animals than in plants': myths and mechanisms. Biol. J. Linn. Soc. Lond. 82 (2004), 453–466.
    • (2004) Biol. J. Linn. Soc. Lond. , vol.82 , pp. 453-466
    • Mable, B.K.1
  • 91
    • 2142843063 scopus 로고
    • Polarity and Localization of Auxin Movement in Hepatic, Marchantia polymorpha
    • Maravolo, N.C., Polarity and Localization of Auxin Movement in Hepatic, Marchantia polymorpha. Am. J. Bot. 63 (1976), 526–531.
    • (1976) Am. J. Bot. , vol.63 , pp. 526-531
    • Maravolo, N.C.1
  • 94
    • 84899751488 scopus 로고    scopus 로고
    • Posttranslationally modified small-peptide signals in plants
    • Matsubayashi, Y., Posttranslationally modified small-peptide signals in plants. Annu. Rev. Plant Biol. 65 (2014), 385–413.
    • (2014) Annu. Rev. Plant Biol. , vol.65 , pp. 385-413
    • Matsubayashi, Y.1
  • 95
    • 84907528769 scopus 로고    scopus 로고
    • Differential retention and divergent resolution of duplicate genes following whole-genome duplication
    • McGrath, C.L., Gout, J.F., Johri, P., Doak, T.G., Lynch, M., Differential retention and divergent resolution of duplicate genes following whole-genome duplication. Genome Res. 24 (2014), 1665–1675.
    • (2014) Genome Res. , vol.24 , pp. 1665-1675
    • McGrath, C.L.1    Gout, J.F.2    Johri, P.3    Doak, T.G.4    Lynch, M.5
  • 98
    • 69449106863 scopus 로고    scopus 로고
    • Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution
    • Mosquna, A., Katz, A., Decker, E.L., Rensing, S.A., Reski, R., Ohad, N., Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution. Development 136 (2009), 2433–2444.
    • (2009) Development , vol.136 , pp. 2433-2444
    • Mosquna, A.1    Katz, A.2    Decker, E.L.3    Rensing, S.A.4    Reski, R.5    Ohad, N.6
  • 99
    • 84944484267 scopus 로고
    • A gene for the fourth chromosome of Drosophila
    • Muller, H.J., A gene for the fourth chromosome of Drosophila. J. Exp. Zool. 17 (1914), 325–336.
    • (1914) J. Exp. Zool. , vol.17 , pp. 325-336
    • Muller, H.J.1
  • 100
    • 0001732966 scopus 로고
    • Why polyploidy is rarer in animals than in plants
    • Muller, H.J., Why polyploidy is rarer in animals than in plants. Am. Nat. 59 (1925), 346–353.
    • (1925) Am. Nat. , vol.59 , pp. 346-353
    • Muller, H.J.1
  • 101
    • 0033604914 scopus 로고    scopus 로고
    • Expressed sequence tags from immature female sexual organ of a liverwort, Marchantia polymorpha
    • Nagai, J., Yamato, K.T., Sakaida, M., Yoda, H., Fukuzawa, H., Ohyama, K., Expressed sequence tags from immature female sexual organ of a liverwort, Marchantia polymorpha. DNA Res. 6 (1999), 1–11.
    • (1999) DNA Res. , vol.6 , pp. 1-11
    • Nagai, J.1    Yamato, K.T.2    Sakaida, M.3    Yoda, H.4    Fukuzawa, H.5    Ohyama, K.6
  • 106
    • 84883257856 scopus 로고    scopus 로고
    • Genome-wide transcriptomic analysis of the sporophyte of the moss Physcomitrella patens
    • O'Donoghue, M.T., Chater, C., Wallace, S., Gray, J.E., Beerling, D.J., Fleming, A.J., Genome-wide transcriptomic analysis of the sporophyte of the moss Physcomitrella patens. J. Exp. Bot. 64 (2013), 3567–3581.
    • (2013) J. Exp. Bot. , vol.64 , pp. 3567-3581
    • O'Donoghue, M.T.1    Chater, C.2    Wallace, S.3    Gray, J.E.4    Beerling, D.J.5    Fleming, A.J.6
  • 107
    • 0026558482 scopus 로고
    • Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome
    • Oda, K., Yamato, K., Ohta, E., Nakamura, Y., Takemura, M., Nozato, N., Akashi, K., Kanegae, T., Ogura, Y., Kohchi, T., et al. Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome. J. Mol. Biol. 223 (1992), 1–7.
    • (1992) J. Mol. Biol. , vol.223 , pp. 1-7
    • Oda, K.1    Yamato, K.2    Ohta, E.3    Nakamura, Y.4    Takemura, M.5    Nozato, N.6    Akashi, K.7    Kanegae, T.8    Ogura, Y.9    Kohchi, T.10
  • 108
    • 85021826857 scopus 로고    scopus 로고
    • Primitive Auxin Response without TIR1 and Aux/IAA in the Charophyte Alga Klebsormidium nitens
    • Ohtaka, K., Hori, K., Kanno, Y., Seo, M., Ohta, H., Primitive Auxin Response without TIR1 and Aux/IAA in the Charophyte Alga Klebsormidium nitens. Plant Physiol. 174 (2017), 1621–1632.
    • (2017) Plant Physiol. , vol.174 , pp. 1621-1632
    • Ohtaka, K.1    Hori, K.2    Kanno, Y.3    Seo, M.4    Ohta, H.5
  • 109
    • 0022546644 scopus 로고
    • Chloroplast Gene Organization Deduced from Complete Sequence of Liverwort Marchantia polymorpha Chloroplast DNA
    • Ohyama, K., Fukuzawa, H., Kohchi, T., Shirai, H., Sano, T., Sano, S., Umesono, K., Shiki, Y., Takeuchi, M., Chang, Z., et al. Chloroplast Gene Organization Deduced from Complete Sequence of Liverwort Marchantia polymorpha Chloroplast DNA. Nature 322 (1986), 572–574.
    • (1986) Nature , vol.322 , pp. 572-574
    • Ohyama, K.1    Fukuzawa, H.2    Kohchi, T.3    Shirai, H.4    Sano, T.5    Sano, S.6    Umesono, K.7    Shiki, Y.8    Takeuchi, M.9    Chang, Z.10
  • 110
    • 70349507539 scopus 로고    scopus 로고
    • A polycomb repressive complex 2 gene regulates apogamy and gives evolutionary insights into early land plant evolution
    • Okano, Y., Aono, N., Hiwatashi, Y., Murata, T., Nishiyama, T., Ishikawa, T., Kubo, M., Hasebe, M., A polycomb repressive complex 2 gene regulates apogamy and gives evolutionary insights into early land plant evolution. Proc. Natl. Acad. Sci. USA 106 (2009), 16321–16326.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 16321-16326
    • Okano, Y.1    Aono, N.2    Hiwatashi, Y.3    Murata, T.4    Nishiyama, T.5    Ishikawa, T.6    Kubo, M.7    Hasebe, M.8
  • 111
    • 0003220989 scopus 로고
    • The Bryophytes of Paleozoic and the Mesozoic
    • Oostendorp, C., The Bryophytes of Paleozoic and the Mesozoic. Bryophyt. Bibl. 34 (1987), 1–110.
    • (1987) Bryophyt. Bibl. , vol.34 , pp. 1-110
    • Oostendorp, C.1
  • 114
    • 84982899807 scopus 로고    scopus 로고
    • Evolution of Gene Duplication in Plants
    • Panchy, N., Lehti-Shiu, M., Shiu, S.H., Evolution of Gene Duplication in Plants. Plant Physiol. 171 (2016), 2294–2316.
    • (2016) Plant Physiol. , vol.171 , pp. 2294-2316
    • Panchy, N.1    Lehti-Shiu, M.2    Shiu, S.H.3
  • 115
    • 0038157152 scopus 로고    scopus 로고
    • Dosage sensitivity and the evolution of gene families in yeast
    • Papp, B., Pál, C., Hurst, L.D., Dosage sensitivity and the evolution of gene families in yeast. Nature 424 (2003), 194–197.
    • (2003) Nature , vol.424 , pp. 194-197
    • Papp, B.1    Pál, C.2    Hurst, L.D.3
  • 116
    • 0000292359 scopus 로고
    • The evolution of the mitotic apparatus: an attempt at comparative ultrastructuralcytology in the dividing plant cells
    • Pickett-Heaps, J.D., The evolution of the mitotic apparatus: an attempt at comparative ultrastructuralcytology in the dividing plant cells. Cytobios 1 (1969), 257–280.
    • (1969) Cytobios , vol.1 , pp. 257-280
    • Pickett-Heaps, J.D.1
  • 117
    • 79955414634 scopus 로고    scopus 로고
    • Strigolactones regulate protonema branching and act as a quorum sensing-like signal in the moss Physcomitrella patens
    • Proust, H., Hoffmann, B., Xie, X., Yoneyama, K., Schaefer, D.G., Yoneyama, K., Nogué, F., Rameau, C., Strigolactones regulate protonema branching and act as a quorum sensing-like signal in the moss Physcomitrella patens. Development 138 (2011), 1531–1539.
    • (2011) Development , vol.138 , pp. 1531-1539
    • Proust, H.1    Hoffmann, B.2    Xie, X.3    Yoneyama, K.4    Schaefer, D.G.5    Yoneyama, K.6    Nogué, F.7    Rameau, C.8
  • 119
    • 85030537753 scopus 로고    scopus 로고
    • FigTree-v1.4.2.
    • Rambaut, A. (2014). FigTree-v1.4.2. http://treebioedacuk/software/figtree/.
    • (2014)
    • Rambaut, A.1
  • 122
    • 84887460677 scopus 로고
    • Zur Entwicklungsgeschichte, Physiologie und Genetik der Lebermoosgattungen Anthoceros und Aspiromitus
    • Rink, W., Zur Entwicklungsgeschichte, Physiologie und Genetik der Lebermoosgattungen Anthoceros und Aspiromitus. Flora 130 (1935), 87–130.
    • (1935) Flora , vol.130 , pp. 87-130
    • Rink, W.1
  • 123
    • 33749357831 scopus 로고    scopus 로고
    • Striking similarities in the genomic distribution of tandemly arrayed genes in Arabidopsis and rice
    • Rizzon, C., Ponger, L., Gaut, B.S., Striking similarities in the genomic distribution of tandemly arrayed genes in Arabidopsis and rice. PLoS Comput. Biol., 2, 2006, e115.
    • (2006) PLoS Comput. Biol. , vol.2 , pp. e115
    • Rizzon, C.1    Ponger, L.2    Gaut, B.S.3
  • 125
    • 79960859584 scopus 로고    scopus 로고
    • The Arabidopsis leucine-rich repeat receptor-like kinases BAK1/SERK3 and BKK1/SERK4 are required for innate immunity to hemibiotrophic and biotrophic pathogens
    • Roux, M., Schwessinger, B., Albrecht, C., Chinchilla, D., Jones, A., Holton, N., Malinovsky, F.G., Tör, M., de Vries, S., Zipfel, C., The Arabidopsis leucine-rich repeat receptor-like kinases BAK1/SERK3 and BKK1/SERK4 are required for innate immunity to hemibiotrophic and biotrophic pathogens. Plant Cell 23 (2011), 2440–2455.
    • (2011) Plant Cell , vol.23 , pp. 2440-2455
    • Roux, M.1    Schwessinger, B.2    Albrecht, C.3    Chinchilla, D.4    Jones, A.5    Holton, N.6    Malinovsky, F.G.7    Tör, M.8    de Vries, S.9    Zipfel, C.10
  • 126
    • 84979735760 scopus 로고    scopus 로고
    • Marchantia MpRKD Regulates the Gametophyte-Sporophyte Transition by Keeping Egg Cells Quiescent in the Absence of Fertilization
    • Rövekamp, M., Bowman, J.L., Grossniklaus, U., Marchantia MpRKD Regulates the Gametophyte-Sporophyte Transition by Keeping Egg Cells Quiescent in the Absence of Fertilization. Curr. Biol. 26 (2016), 1782–1789.
    • (2016) Curr. Biol. , vol.26 , pp. 1782-1789
    • Rövekamp, M.1    Bowman, J.L.2    Grossniklaus, U.3
  • 127
    • 45849098234 scopus 로고    scopus 로고
    • Organellar RNA editing and plant-specific extensions of pentatricopeptide repeat proteins in jungermanniid but not in marchantiid liverworts
    • Rüdinger, M., Polsakiewicz, M., Knoop, V., Organellar RNA editing and plant-specific extensions of pentatricopeptide repeat proteins in jungermanniid but not in marchantiid liverworts. Mol. Biol. Evol. 25 (2008), 1405–1414.
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 1405-1414
    • Rüdinger, M.1    Polsakiewicz, M.2    Knoop, V.3
  • 128
    • 84923299074 scopus 로고    scopus 로고
    • ABA as a Universal Plant Hormone
    • Sakata, Y., Komatsu, K., Takezawa, D., ABA as a Universal Plant Hormone. Prog. Bot. 75 (2014), 57–96.
    • (2014) Prog. Bot. , vol.75 , pp. 57-96
    • Sakata, Y.1    Komatsu, K.2    Takezawa, D.3
  • 129
    • 0034065724 scopus 로고    scopus 로고
    • Ab initio gene finding in Drosophila genomic DNA
    • Salamov, A.A., Solovyev, V.V., Ab initio gene finding in Drosophila genomic DNA. Genome Res. 10 (2000), 516–522.
    • (2000) Genome Res. , vol.10 , pp. 516-522
    • Salamov, A.A.1    Solovyev, V.V.2
  • 130
    • 34250682971 scopus 로고    scopus 로고
    • Increases in the number of SNARE genes parallels the rise of multicellularity among the green plants
    • Sanderfoot, A., Increases in the number of SNARE genes parallels the rise of multicellularity among the green plants. Plant Physiol. 144 (2007), 6–17.
    • (2007) Plant Physiol. , vol.144 , pp. 6-17
    • Sanderfoot, A.1
  • 131
    • 84958523930 scopus 로고    scopus 로고
    • Comparative analysis of plant immune receptor architectures uncovers host proteins likely targeted by pathogens
    • Sarris, P.F., Cevik, V., Dagdas, G., Jones, J.D.G., Krasileva, K.V., Comparative analysis of plant immune receptor architectures uncovers host proteins likely targeted by pathogens. BMC Biol., 14, 2016, 8.
    • (2016) BMC Biol. , vol.14 , pp. 8
    • Sarris, P.F.1    Cevik, V.2    Dagdas, G.3    Jones, J.D.G.4    Krasileva, K.V.5
  • 132
    • 0006319712 scopus 로고
    • Hydrophobic cuticular ledges prevent water entering the air pores of liverwort thalli
    • Schönherr, J., Ziegler, H., Hydrophobic cuticular ledges prevent water entering the air pores of liverwort thalli. Planta 124 (1975), 51–60.
    • (1975) Planta , vol.124 , pp. 51-60
    • Schönherr, J.1    Ziegler, H.2
  • 135
    • 84964879082 scopus 로고    scopus 로고
    • Marchantia polymorpha: Taxonomy, Phylogeny and Morphology of a Model System
    • Shimamura, M., Marchantia polymorpha: Taxonomy, Phylogeny and Morphology of a Model System. Plant Cell Physiol. 57 (2016), 230–256.
    • (2016) Plant Cell Physiol. , vol.57 , pp. 230-256
    • Shimamura, M.1
  • 136
    • 0035845575 scopus 로고    scopus 로고
    • Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases
    • Shiu, S.H., Bleecker, A.B., Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases. Proc. Natl. Acad. Sci. USA 98 (2001), 10763–10768.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 10763-10768
    • Shiu, S.H.1    Bleecker, A.B.2
  • 138
    • 85030555129 scopus 로고    scopus 로고
    • RepeatModeler Open-1.0. <>.
    • Smit, A.F.A., and Hubley, R. (2008–2015). RepeatModeler Open-1.0. < http://www.repeatmasker.org>.
    • (2008)
    • Smit, A.F.A.1    Hubley, R.2
  • 139
    • 85030544420 scopus 로고    scopus 로고
    • RepeatMasker Open-4.0. <>.
    • Smit, A.F.A., Hubley, R., and Green, P. (2013–2015). RepeatMasker Open-4.0. < http://www.repeatmasker.org>.
    • (2013)
    • Smit, A.F.A.1    Hubley, R.2    Green, P.3
  • 140
    • 85020190676 scopus 로고    scopus 로고
    • Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny
    • Smith, S.A., Pease, J.B., Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny. Brief. Bioinform. 18 (2017), 451–457.
    • (2017) Brief. Bioinform. , vol.18 , pp. 451-457
    • Smith, S.A.1    Pease, J.B.2
  • 141
    • 84899553363 scopus 로고    scopus 로고
    • RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
    • Stamatakis, A., RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30 (2014), 1312–1313.
    • (2014) Bioinformatics , vol.30 , pp. 1312-1313
    • Stamatakis, A.1
  • 142
    • 75349090212 scopus 로고    scopus 로고
    • Fine-grained annotation and classification of de novo predicted LTR retrotransposons
    • Steinbiss, S., Willhoeft, U., Gremme, G., Kurtz, S., Fine-grained annotation and classification of de novo predicted LTR retrotransposons. Nucleic Acids Res. 37 (2009), 7002–7013.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 7002-7013
    • Steinbiss, S.1    Willhoeft, U.2    Gremme, G.3    Kurtz, S.4
  • 143
    • 77958591658 scopus 로고    scopus 로고
    • The moss Physcomitrella patens contains cyclopentenones but no jasmonates: mutations in allene oxide cyclase lead to reduced fertility and altered sporophyte morphology
    • Stumpe, M., Göbel, C., Faltin, B., Beike, A.K., Hause, B., Himmelsbach, K., Bode, J., Kramell, R., Wasternack, C., Frank, W., et al. The moss Physcomitrella patens contains cyclopentenones but no jasmonates: mutations in allene oxide cyclase lead to reduced fertility and altered sporophyte morphology. New Phytol. 188 (2010), 740–749.
    • (2010) New Phytol. , vol.188 , pp. 740-749
    • Stumpe, M.1    Göbel, C.2    Faltin, B.3    Beike, A.K.4    Hause, B.5    Himmelsbach, K.6    Bode, J.7    Kramell, R.8    Wasternack, C.9    Frank, W.10
  • 145
    • 0033738298 scopus 로고    scopus 로고
    • Cellular localization of isoprenoid biosynthetic enzymes in Marchantia polymorpha. Uncovering a new role of oil bodies
    • Suire, C., Bouvier, F., Backhaus, R.A., Bégu, D., Bonneu, M., Camara, B., Cellular localization of isoprenoid biosynthetic enzymes in Marchantia polymorpha. Uncovering a new role of oil bodies. Plant Physiol. 124 (2000), 971–978.
    • (2000) Plant Physiol. , vol.124 , pp. 971-978
    • Suire, C.1    Bouvier, F.2    Backhaus, R.A.3    Bégu, D.4    Bonneu, M.5    Camara, B.6
  • 148
    • 84978008054 scopus 로고    scopus 로고
    • Evolutionary patterns of genic DNA methylation vary across land plants
    • Takuno, S., Ran, J.H., Gaut, B.S., Evolutionary patterns of genic DNA methylation vary across land plants. Nat Plants, 2, 2016, 15222.
    • (2016) Nat Plants , vol.2 , pp. 15222
    • Takuno, S.1    Ran, J.H.2    Gaut, B.S.3
  • 150
    • 85002783739 scopus 로고    scopus 로고
    • Direct evidence of specific localization of sesquiterpenes and marchantin A in oil body cells of Marchantia polymorpha L
    • Tanaka, M., Esaki, T., Kenmoku, H., Koeduka, T., Kiyoyama, Y., Masujima, T., Asakawa, Y., Matsui, K., Direct evidence of specific localization of sesquiterpenes and marchantin A in oil body cells of Marchantia polymorpha L. Phytochemistry 130 (2016), 77–84.
    • (2016) Phytochemistry , vol.130 , pp. 77-84
    • Tanaka, M.1    Esaki, T.2    Kenmoku, H.3    Koeduka, T.4    Kiyoyama, Y.5    Masujima, T.6    Asakawa, Y.7    Matsui, K.8
  • 151
    • 80052969570 scopus 로고    scopus 로고
    • The evolutionary origin of orphan genes
    • Tautz, D., Domazet-Lošo, T., The evolutionary origin of orphan genes. Nat. Rev. Genet. 12 (2011), 692–702.
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 692-702
    • Tautz, D.1    Domazet-Lošo, T.2
  • 152
    • 77949516011 scopus 로고    scopus 로고
    • Evolutionarily conserved regulatory mechanisms of abscisic acid signaling in land plants: characterization of ABSCISIC ACID INSENSITIVE1-like type 2C protein phosphatase in the liverwort Marchantia polymorpha
    • Tougane, K., Komatsu, K., Bhyan, S.B., Sakata, Y., Ishizaki, K., Yamato, K.T., Kohchi, T., Takezawa, D., Evolutionarily conserved regulatory mechanisms of abscisic acid signaling in land plants: characterization of ABSCISIC ACID INSENSITIVE1-like type 2C protein phosphatase in the liverwort Marchantia polymorpha. Plant Physiol. 152 (2010), 1529–1543.
    • (2010) Plant Physiol. , vol.152 , pp. 1529-1543
    • Tougane, K.1    Komatsu, K.2    Bhyan, S.B.3    Sakata, Y.4    Ishizaki, K.5    Yamato, K.T.6    Kohchi, T.7    Takezawa, D.8
  • 156
  • 157
    • 84949255601 scopus 로고    scopus 로고
    • Divergence times and the evolution of morphological complexity in an early land plant lineage (Marchantiopsida) with a slow molecular rate
    • Villarreal A, J.C., Crandall-Stotler, B.J., Hart, M.L., Long, D.G., Forrest, L.L., Divergence times and the evolution of morphological complexity in an early land plant lineage (Marchantiopsida) with a slow molecular rate. New Phytol. 209 (2016), 1734–1746.
    • (2016) New Phytol. , vol.209 , pp. 1734-1746
    • Villarreal A, J.C.1    Crandall-Stotler, B.J.2    Hart, M.L.3    Long, D.G.4    Forrest, L.L.5
  • 158
    • 33746685034 scopus 로고    scopus 로고
    • Comparative analysis of expressed sequences reveals a conserved pattern of optimal codon usage in plants
    • Wang, L., Roossinck, M.J., Comparative analysis of expressed sequences reveals a conserved pattern of optimal codon usage in plants. Plant Mol. Biol. 61 (2006), 699–710.
    • (2006) Plant Mol. Biol. , vol.61 , pp. 699-710
    • Wang, L.1    Roossinck, M.J.2
  • 159
    • 84923658595 scopus 로고    scopus 로고
    • Insights into the origin and evolution of the plant hormone signaling machinery
    • Wang, C., Liu, Y., Li, S.S., Han, G.Z., Insights into the origin and evolution of the plant hormone signaling machinery. Plant Physiol. 167 (2015), 872–886.
    • (2015) Plant Physiol. , vol.167 , pp. 872-886
    • Wang, C.1    Liu, Y.2    Li, S.S.3    Han, G.Z.4
  • 160
    • 77951682635 scopus 로고    scopus 로고
    • KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies
    • Wang, D., Zhang, Y., Zhang, S., Zhu, J., Yu, J., KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies. Genomics Proteomics Bioinformatics 8 (2010), 77–80.
    • (2010) Genomics Proteomics Bioinformatics , vol.8 , pp. 77-80
    • Wang, D.1    Zhang, Y.2    Zhang, S.3    Zhu, J.4    Yu, J.5
  • 161
    • 84856660311 scopus 로고    scopus 로고
    • A catalogue of eukaryotic transcription factor types, their evolutionary origin, and species distribution
    • Weirauch, M.T., Hughes, T.R., A catalogue of eukaryotic transcription factor types, their evolutionary origin, and species distribution. Subcell. Biochem. 52 (2011), 25–73.
    • (2011) Subcell. Biochem. , vol.52 , pp. 25-73
    • Weirauch, M.T.1    Hughes, T.R.2
  • 162
    • 0141828151 scopus 로고    scopus 로고
    • Fragments of the earliest land plants
    • Wellman, C.H., Osterloff, P.L., Mohiuddin, U., Fragments of the earliest land plants. Nature 425 (2003), 282–285.
    • (2003) Nature , vol.425 , pp. 282-285
    • Wellman, C.H.1    Osterloff, P.L.2    Mohiuddin, U.3
  • 163
    • 0034045712 scopus 로고    scopus 로고
    • Molecular Phylogenetic Reconstructions of the Marchantioid Liverwort Radiation
    • Wheeler, J.A., Molecular Phylogenetic Reconstructions of the Marchantioid Liverwort Radiation. Bryologist 103 (2000), 314–333.
    • (2000) Bryologist , vol.103 , pp. 314-333
    • Wheeler, J.A.1
  • 169
    • 0035002015 scopus 로고    scopus 로고
    • Computational inference of homologous gene structures in the human genome
    • Yeh, R.F., Lim, L.P., Burge, C.B., Computational inference of homologous gene structures in the human genome. Genome Res. 11 (2001), 803–816.
    • (2001) Genome Res. , vol.11 , pp. 803-816
    • Yeh, R.F.1    Lim, L.P.2    Burge, C.B.3
  • 170
    • 84869409983 scopus 로고    scopus 로고
    • Widespread impact of horizontal gene transfer on plant colonization of land
    • Yue, J., Hu, X., Sun, H., Yang, Y., Huang, J., Widespread impact of horizontal gene transfer on plant colonization of land. Nat. Commun., 3, 2012, 1152.
    • (2012) Nat. Commun. , vol.3 , pp. 1152
    • Yue, J.1    Hu, X.2    Sun, H.3    Yang, Y.4    Huang, J.5
  • 171
    • 33646525169 scopus 로고    scopus 로고
    • Perception of the bacterial PAMP EF-Tu by the receptor EFR restricts Agrobacterium-mediated transformation
    • Zipfel, C., Kunze, G., Chinchilla, D., Caniard, A., Jones, J.D.G., Boller, T., Felix, G., Perception of the bacterial PAMP EF-Tu by the receptor EFR restricts Agrobacterium-mediated transformation. Cell 125 (2006), 749–760.
    • (2006) Cell , vol.125 , pp. 749-760
    • Zipfel, C.1    Kunze, G.2    Chinchilla, D.3    Caniard, A.4    Jones, J.D.G.5    Boller, T.6    Felix, G.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.