메뉴 건너뛰기




Volumn 33, Issue 11, 2016, Pages 2815-2819

The Stepwise Increase in the Number of Transcription Factor Families in the Precambrian Predated the Diversification of Plants on Land

Author keywords

bHLH; Homeodomain; plant evolution; transcription factors

Indexed keywords

HELIX LOOP HELIX PROTEIN; TRANSCRIPTION FACTOR; DNA BINDING PROTEIN;

EID: 84994501833     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msw155     Document Type: Article
Times cited : (70)

References (39)
  • 2
    • 58349101981 scopus 로고    scopus 로고
    • The puzzle of plastid evolution
    • Archibald JM. 2009. The puzzle of plastid evolution. Curr Biol. 19:81-88.
    • (2009) Curr Biol , vol.19 , pp. 81-88
    • Archibald, J.M.1
  • 4
    • 0035931911 scopus 로고    scopus 로고
    • Chance and necessity: The evolution of morphological complexity and diversity
    • Carroll SB. 2001. Chance and necessity: the evolution of morphological complexity and diversity. Nature 409:1102-1109.
    • (2001) Nature , vol.409 , pp. 1102-1109
    • Carroll, S.B.1
  • 6
    • 84894600564 scopus 로고    scopus 로고
    • Conflicting phylogenies for early land plants are caused by composition biases among synonymous substitutions
    • Cox CJ, Li B, Foster PG, Embley TM, Civan P. 2014. Conflicting phylogenies for early land plants are caused by composition biases among synonymous substitutions. Syst Biol. 63:272-279.
    • (2014) Syst Biol , vol.63 , pp. 272-279
    • Cox, C.J.1    Li, B.2    Foster, P.G.3    Embley, T.M.4    Civan, P.5
  • 10
    • 84928245679 scopus 로고    scopus 로고
    • The advent of animals: The view from the Ediacaran
    • Droser ML, Gehling JG. 2015. The advent of animals: the view from the Ediacaran. Proc Natl Acad Sci. 112:4865-4870.
    • (2015) Proc Natl Acad Sci , vol.112 , pp. 4865-4870
    • Droser, M.L.1    Gehling, J.G.2
  • 11
    • 82255195530 scopus 로고    scopus 로고
    • The Cambrian conundrum: Early divergence and later ecological success in the early history of animals
    • Erwin DH, Laflamme M, Tweedt SM, Sperling EA, Pisani D, Peterson KJ. 2011. The Cambrian conundrum: early divergence and later ecological success in the early history of animals. Science 334:1091-1097.
    • (2011) Science , vol.334 , pp. 1091-1097
    • Erwin, D.H.1    Laflamme, M.2    Tweedt, S.M.3    Sperling, E.A.4    Pisani, D.5    Peterson, K.J.6
  • 12
    • 78650511270 scopus 로고    scopus 로고
    • Multigene phylogeny of the green lineage reveals the origin and diversification of land plants
    • Finet C, Timme RE, Delwiche CF, Marletaz F. 2010. Multigene phylogeny of the green lineage reveals the origin and diversification of land plants. Curr Biol. 20:2217-2222.
    • (2010) Curr Biol , vol.20 , pp. 2217-2222
    • Finet, C.1    Timme, R.E.2    Delwiche, C.F.3    Marletaz, F.4
  • 14
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon S, Dufayard J-F, Lefort V, Anisimova M, Hordijk W, Gascuel O. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 59:307-321.
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.-F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 15
    • 0034712758 scopus 로고    scopus 로고
    • The origin of plants: Body plan changes contributing to a major evolutionary radiation
    • Graham LE, Cook ME, Busse JS. 2000. The origin of plants: body plan changes contributing to a major evolutionary radiation. Proc Natl Acad Sci USA. 97:4535-4540.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 4535-4540
    • Graham, L.E.1    Cook, M.E.2    Busse, J.S.3
  • 16
    • 84897508478 scopus 로고    scopus 로고
    • A genome-wide survey of bHLH transcription factors in the Placozoan Trichoplax adhaerens reveals the ancient repertoire of this gene family in metazoan
    • Gyoja F. 2014. A genome-wide survey of bHLH transcription factors in the Placozoan Trichoplax adhaerens reveals the ancient repertoire of this gene family in metazoan. Gene 542:29-37.
    • (2014) Gene , vol.542 , pp. 29-37
    • Gyoja, F.1
  • 19
    • 84891810676 scopus 로고    scopus 로고
    • PlantTFDB 3.0: A portal for the functional and evolutionary study of plant transcription factors
    • Jin J, Zhang H, Kong L, Gao G, LuoJ. 2014. PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors. Nucleic Acids Res. 42:1-6.
    • (2014) Nucleic Acids Res , vol.42 , pp. 1-6
    • Jin, J.1    Zhang, H.2    Kong, L.3    Gao, G.4    Luo, J.5
  • 21
    • 0030885968 scopus 로고    scopus 로고
    • The origin and early evolution of plants on land
    • Kenrick P, Crane PR. 1997b. The origin and early evolution of plants on land. Nature 389:33-39.
    • (1997) Nature , vol.389 , pp. 33-39
    • Kenrick, P.1    Crane, P.R.2
  • 23
    • 79952734017 scopus 로고    scopus 로고
    • Sequence and function of basic helix-loop-helix proteins required for stomatal development in Arabidopsis are deeply conserved in land plants
    • MacAlister CA, Bergmann DC. 2011. Sequence and function of basic helix-loop-helix proteins required for stomatal development in Arabidopsis are deeply conserved in land plants. Evol Dev. 13:182-192.
    • (2011) Evol Dev , vol.13 , pp. 182-192
    • MacAlister, C.A.1    Bergmann, D.C.2
  • 25
    • 70450265540 scopus 로고    scopus 로고
    • A comprehensive classification and evolutionary analysis of plant homeobox genes
    • Mukherjee K, Brocchieri L, Bürglin TR. 2009. A comprehensive classification and evolutionary analysis of plant homeobox genes. Mol Biol Evol. 26:2775-2794.
    • (2009) Mol Biol Evol , vol.26 , pp. 2775-2794
    • Mukherjee, K.1    Brocchieri, L.2    Bürglin, T.R.3
  • 26
    • 27844524905 scopus 로고    scopus 로고
    • Evolutionary change of the numbers of homeobox genes in bilateral animals
    • Nam J, Nei M. 2005. Evolutionary change of the numbers of homeobox genes in bilateral animals. Mol Biol Evol. 22:2386-2394.
    • (2005) Mol Biol Evol , vol.22 , pp. 2386-2394
    • Nam, J.1    Nei, M.2
  • 27
    • 0033638953 scopus 로고    scopus 로고
    • Multigene phylog-eny of land plants with special reference to bryophytes and the earliest land plants
    • Nickrent DL, Parkinson CL, Palmer JD, Duff RJ. 2000. Multigene phylog-eny of land plants with special reference to bryophytes and the earliest land plants. Mol Biol Evol. 17:1885-1895.
    • (2000) Mol Biol Evol , vol.17 , pp. 1885-1895
    • Nickrent, D.L.1    Parkinson, C.L.2    Palmer, J.D.3    Duff, R.J.4
  • 28
    • 80052019696 scopus 로고    scopus 로고
    • Estimating the timing of early eukaryotic diversification with multigene molecular clocks
    • Parfrey LW, Lahr DJG, Knoll AH, Katz LA. 2011. Estimating the timing of early eukaryotic diversification with multigene molecular clocks. Proc Natl Acad Sci U S A. 108:13624-13629.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 13624-13629
    • Parfrey, L.W.1    Lahr, D.J.G.2    Knoll, A.H.3    Katz, L.A.4
  • 29
    • 33846666466 scopus 로고    scopus 로고
    • Termination of asymmetric cell division and differentiation of stomata
    • Pillitteri LJ, Sloan DB, Bogenschutz NL, Torii KU. 2007. Termination of asymmetric cell division and differentiation of stomata. Nature 445:501-505.
    • (2007) Nature , vol.445 , pp. 501-505
    • Pillitteri, L.J.1    Sloan, D.B.2    Bogenschutz, N.L.3    Torii, K.U.4
  • 30
    • 77952222149 scopus 로고    scopus 로고
    • Origin and diversification of basic-helix-loop-helix proteins in plants
    • Pires N, Dolan L. 2010. Origin and diversification of basic-helix-loop-helix proteins in plants. Mol Biol Evol. 27:862-874.
    • (2010) Mol Biol Evol , vol.27 , pp. 862-874
    • Pires, N.1    Dolan, L.2
  • 31
    • 84878717968 scopus 로고    scopus 로고
    • Recruitment and remodeling of an ancient gene regulatory network during land plant evolution
    • Pires ND, Yi K, Breuninger H, Catarino B, Menand B, Dolan L. 2013. Recruitment and remodeling of an ancient gene regulatory network during land plant evolution. Proc Natl Acad Sci. 110:9571-9576.
    • (2013) Proc Natl Acad Sci , vol.110 , pp. 9571-9576
    • Pires, N.D.1    Yi, K.2    Breuninger, H.3    Catarino, B.4    Menand, B.5    Dolan, L.6
  • 32
    • 84874959840 scopus 로고    scopus 로고
    • Increase in evenness and sampled alpha diversity through the Phanerozoic: Comparison of early Paleozoic and Cenozoic marine fossil assemblages
    • Powell MG, Kowalewski M. 2002. Increase in evenness and sampled alpha diversity through the Phanerozoic: comparison of early Paleozoic and Cenozoic marine fossil assemblages. Geology 30:331-334.
    • (2002) Geology , vol.30 , pp. 331-334
    • Powell, M.G.1    Kowalewski, M.2
  • 34
    • 79955094039 scopus 로고    scopus 로고
    • The homeodomain complement of the ctenophore Mnemiopsis leidyi suggests that Ctenophora and Porifera diverged prior to the ParaHoxozoa
    • Ryan JF, Pang K, Mullikin JC, Martindale MQ, Baxevanis AD. 2010. The homeodomain complement of the ctenophore Mnemiopsis leidyi suggests that Ctenophora and Porifera diverged prior to the ParaHoxozoa. Evodevo 1:9.
    • (2010) Evodevo , vol.1 , pp. 9
    • Ryan, J.F.1    Pang, K.2    Mullikin, J.C.3    Martindale, M.Q.4    Baxevanis, A.D.5
  • 35
    • 84968820949 scopus 로고    scopus 로고
    • Chapter One-technological innovations give rise to a new era of plant evolutionary developmental biology
    • Rensing S, editor London: Elsevier Ltd.
    • Sakakibara K. 2016. Chapter One-technological innovations give rise to a new era of plant evolutionary developmental biology. In: Rensing S, editor. Genomes and evolution of charophytes, bryophytes, lyco-phytes and ferns. London: Elsevier Ltd. p. 3-35.
    • (2016) Genomes and Evolution of Charophytes, Bryophytes, Lyco-phytes and Ferns , pp. 3-35
    • Sakakibara, K.1
  • 37
    • 84937719596 scopus 로고    scopus 로고
    • Conserved regulatory mechanism controls the development of cells with rooting functions in land plants
    • Tam THY, Catarino B, Dolan L. 2015. Conserved regulatory mechanism controls the development of cells with rooting functions in land plants. Proc Natl Acad Sci. 112:E3959-E3968.
    • (2015) Proc Natl Acad Sci , vol.112 , pp. E3959-E3968
    • Tam, T.H.Y.1    Catarino, B.2    Dolan, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.