The Sequence Alignment/Map format and SAMtools

Bioinformatics

Volumn 25, Issue 16, 2009, Pages 2078-2079

  Li, Heng ^a   Handsaker, Bob ^b   Wysoker, Alec ^b   Fennell, Tim ^b   Ruan, Jue ^c   Homer, Nils ^d   Marth, Gabor ^e   Abecasis, Goncalo ^f   Durbin, Richard ^a  

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^b MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^c Chinese Academy of Sciences and China National Center for Bioinformation   (China)

^d University of California   (United States)

^e BOSTON COLLEGE   (United States)

^f UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ARTICLE; BIOINFORMATICS; COMPUTER ANALYSIS; COMPUTER PROGRAM; COMPUTER SYSTEM; GENOME ANALYSIS; INFORMATION PROCESSING; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS;

ALGORITHMS; BASE SEQUENCE; COMPUTATIONAL BIOLOGY; GENOME; GENOMICS; MOLECULAR SEQUENCE DATA; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 68549104404     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp352     Document Type: Article

References (4)

1. Kent,W.J. et al. (2002) The human genome browser at UCSC. Genome Res., 12, 996-1006.
2. Langmead,B. et al (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10 R25.
3. Li,H. et al (2008) Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res., 18, 1851-1858.
4. Mardis,E.R. (2008) Next-generation DNA sequencing methods. Annu. Rev. Genomics Hum. Genet., 9, 387-402.