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Volumn 12, Issue 2, 2016, Pages

Genomics of Rapid Incipient Speciation in Sympatric Threespine Stickleback

Author keywords

[No Author keywords available]

Indexed keywords

DNA SEQUENCE; ECOTYPE; GENE FLOW; GENOMIC ISLAND; GENOMICS; HABITAT; HIDDEN MARKOV MODEL; QUANTITATIVE TRAIT LOCUS; RESIDENT; RESTRICTION SITE; SINGLE NUCLEOTIDE POLYMORPHISM; SPECIES DIFFERENTIATION; STICKLEBACK; SYMPATRY; ANIMAL; GENE FREQUENCY; GENETIC SELECTION; GENETICS; GENOME; ISLAND (GEOLOGICAL); LAKE; POPULATION GENETICS; RIVER; SMEGMAMORPHA; SWITZERLAND;

EID: 84959917215     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1005887     Document Type: Article
Times cited : (178)

References (171)
  • 2
    • 84938514729 scopus 로고    scopus 로고
    • ().:.
    • Nosil P, (2012) Ecological speciation. Oxford: Oxford University Press.
    • (2012)
    • Nosil, P.1
  • 3
    • 0035677674 scopus 로고    scopus 로고
    • The genic view of the process of speciation
    • ().:–.
    • Wu CI, (2001) The genic view of the process of speciation. J Evol Biol14: 851–865.
    • (2001) J Evol Biol , vol.14 , pp. 851-865
    • Wu, C.I.1
  • 4
    • 52649106377 scopus 로고    scopus 로고
    • Hitching a lift on the road to speciation
    • 19378398, ().:–.
    • Smadja C, Galindo J, Butlin R, (2008) Hitching a lift on the road to speciation. Mol Ecol17: 4177–4180. 19378398
    • (2008) Mol Ecol , vol.17 , pp. 4177-4180
    • Smadja, C.1    Galindo, J.2    Butlin, R.3
  • 5
    • 52649091697 scopus 로고    scopus 로고
    • The genetic mosaic suggests a new role for hitchhiking in ecological speciation
    • 18986504, ().:–.
    • Via S, West J, (2008) The genetic mosaic suggests a new role for hitchhiking in ecological speciation. Mol Ecol17: 4334–4345. doi: 10.1111/j.1365-294X.2008.03921.x18986504
    • (2008) Mol Ecol , vol.17 , pp. 4334-4345
    • Via, S.1    West, J.2
  • 6
    • 84862499260 scopus 로고    scopus 로고
    • The genomics of speciation-with-gene-flow
    • 22520730, ().:–.
    • Feder JL, Egan SP, Nosil P, (2012) The genomics of speciation-with-gene-flow. Trends Genet28: 342–350. doi: 10.1016/j.tig.2012.03.00922520730
    • (2012) Trends Genet , vol.28 , pp. 342-350
    • Feder, J.L.1    Egan, S.P.2    Nosil, P.3
  • 7
    • 84905374931 scopus 로고    scopus 로고
    • Theoretical models of the influence of genomic architecture on the dynamics of speciation
    • 24724861, ().:–.
    • Flaxman SM, Wacholder AC, Feder JL, Nosil P, (2014) Theoretical models of the influence of genomic architecture on the dynamics of speciation. Mol Ecol23: 4074–4088. doi: 10.1111/mec.1275024724861
    • (2014) Mol Ecol , vol.23 , pp. 4074-4088
    • Flaxman, S.M.1    Wacholder, A.C.2    Feder, J.L.3    Nosil, P.4
  • 8
    • 24944471763 scopus 로고    scopus 로고
    • Genomic islands of speciation in Anopheles gambiae
    • 16076241, ().:.
    • Turner TL, Hahn MW, Nuzhdin SV, (2005) Genomic islands of speciation in Anopheles gambiae. PLoS Biol3: e285. 16076241
    • (2005) PLoS Biol , vol.3 , pp. e285
    • Turner, T.L.1    Hahn, M.W.2    Nuzhdin, S.V.3
  • 9
    • 33744816190 scopus 로고    scopus 로고
    • Genomic islands of differentiation between house mouse subspecies
    • 16687734, ().:–.
    • Harr B, (2006) Genomic islands of differentiation between house mouse subspecies. Genome Res16: 730–737. 16687734
    • (2006) Genome Res , vol.16 , pp. 730-737
    • Harr, B.1
  • 10
    • 0000978195 scopus 로고
    • Skepticism towards Santa Rosalia, or why are there so few kinds of animals
    • ().:–.
    • Felsenstein J, (1981) Skepticism towards Santa Rosalia, or why are there so few kinds of animals. Evolution35: 124–138.
    • (1981) Evolution , vol.35 , pp. 124-138
    • Felsenstein, J.1
  • 11
    • 0036182581 scopus 로고    scopus 로고
    • Speciation by natural and sexual selection: models and experiments
    • 18707367, ().:–.
    • Kirkpatrick M, Ravigne V, (2002) Speciation by natural and sexual selection: models and experiments. Am Nat159Suppl 3: S22–35. doi: 10.1086/33837018707367
    • (2002) Am Nat , vol.159 , pp. S22-35
    • Kirkpatrick, M.1    Ravigne, V.2
  • 12
    • 84959903113 scopus 로고    scopus 로고
    • ().:.
    • Gavrilets S, (2004) Fitness landscapes and the origin of species. Princeton, NJ: Princeton University Press.
    • (2004)
    • Gavrilets, S.1
  • 13
    • 79960020226 scopus 로고    scopus 로고
    • The genetic architecture of adaptation under migration-selection balance
    • 21729046, ().:–.
    • Yeaman S, Whitlock MC, (2011) The genetic architecture of adaptation under migration-selection balance. Evolution65: 1897–1911. doi: 10.1111/j.1558-5646.2011.01269.x21729046
    • (2011) Evolution , vol.65 , pp. 1897-1911
    • Yeaman, S.1    Whitlock, M.C.2
  • 14
    • 84255162277 scopus 로고    scopus 로고
    • Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice
    • 22201170, ().:–.
    • Nachman MW, Payseur BA, (2012) Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice. Philos Trans R Soc Lond B Biol Sci367: 409–421. doi: 10.1098/rstb.2011.024922201170
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 409-421
    • Nachman, M.W.1    Payseur, B.A.2
  • 15
    • 33744466839 scopus 로고    scopus 로고
    • Chromosome inversions, local adaptation and speciation
    • 16204214, ().:–.
    • Kirkpatrick M, Barton N, (2006) Chromosome inversions, local adaptation and speciation. Genetics173: 419–434. 16204214
    • (2006) Genetics , vol.173 , pp. 419-434
    • Kirkpatrick, M.1    Barton, N.2
  • 16
    • 84877316373 scopus 로고    scopus 로고
    • Genomic rearrangements and the evolution of clusters of locally adaptive loci
    • 23610436, ().:–.
    • Yeaman S, (2013) Genomic rearrangements and the evolution of clusters of locally adaptive loci. Proc Natl Acad Sci U S A110: E1743–1751. doi: 10.1073/pnas.121938111023610436
    • (2013) Proc Natl Acad Sci U S A , vol.110 , pp. E1743-1751
    • Yeaman, S.1
  • 17
    • 77953625372 scopus 로고    scopus 로고
    • Genomic islands of speciation or genomic islands and speciation?
    • 20456221, ():–.
    • Turner TL, Hahn MW, (2010) Genomic islands of speciation or genomic islands and speciation?Mol Ecol19: 848–850. doi: 10.1111/j.1365-294X.2010.04532.x20456221
    • (2010) Mol Ecol , vol.19 , pp. 848-850
    • Turner, T.L.1    Hahn, M.W.2
  • 18
    • 79955950528 scopus 로고    scopus 로고
    • Ecology, sexual selection and speciation
    • 21375683, ().:–.
    • Maan ME, Seehausen O, (2011) Ecology, sexual selection and speciation. Ecol Lett14: 591–602. doi: 10.1111/j.1461-0248.2011.01606.x21375683
    • (2011) Ecol Lett , vol.14 , pp. 591-602
    • Maan, M.E.1    Seehausen, O.2
  • 19
    • 79960213694 scopus 로고    scopus 로고
    • Magic traits in speciation: 'magic' but not rare?
    • 21592615, ():–.
    • Servedio MR, Van Doorn GS, Kopp M, Frame AM, Nosil P, (2011) Magic traits in speciation: 'magic' but not rare?Trends Ecol Evol26: 389–397. doi: 10.1016/j.tree.2011.04.00521592615
    • (2011) Trends Ecol Evol , vol.26 , pp. 389-397
    • Servedio, M.R.1    Van Doorn, G.S.2    Kopp, M.3    Frame, A.M.4    Nosil, P.5
  • 20
    • 60949088263 scopus 로고    scopus 로고
    • Ecological explanations for (incomplete) speciation
    • 19185951, ().:–.
    • Nosil P, Harmon LJ, Seehausen O, (2009) Ecological explanations for (incomplete) speciation. Trends Ecol Evol24: 145–156. doi: 10.1016/j.tree.2008.10.01119185951
    • (2009) Trends Ecol Evol , vol.24 , pp. 145-156
    • Nosil, P.1    Harmon, L.J.2    Seehausen, O.3
  • 21
    • 84255177701 scopus 로고    scopus 로고
    • Establishment of new mutations under divergence and genome hitchhiking
    • 22201175, ().:–.
    • Feder JL, Gejji R, Yeaman S, Nosil P, (2012) Establishment of new mutations under divergence and genome hitchhiking. Philos Trans R Soc Lond B Biol Sci367: 461–474. doi: 10.1098/rstb.2011.025622201175
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 461-474
    • Feder, J.L.1    Gejji, R.2    Yeaman, S.3    Nosil, P.4
  • 22
    • 84255187761 scopus 로고    scopus 로고
    • Divergence hitchhiking and the spread of genomic isolation during ecological speciation-with-gene-flow
    • 22201174, ().:–.
    • Via S, (2012) Divergence hitchhiking and the spread of genomic isolation during ecological speciation-with-gene-flow. Philos Trans R Soc Lond B Biol Sci367: 451–460. doi: 10.1098/rstb.2011.026022201174
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 451-460
    • Via, S.1
  • 23
    • 77953092533 scopus 로고    scopus 로고
    • Widespread genomic divergence during sympatric speciation
    • 20457907, . ().:–.
    • Michel AP, Sim S, Powell TH, Taylor MS, Nosil P, et al. (2010) Widespread genomic divergence during sympatric speciation. Proc Natl Acad Sci U S A107: 9724–9729. doi: 10.1073/pnas.100093910720457907
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 9724-9729
    • Michel, A.P.1    Sim, S.2    Powell, T.H.3    Taylor, M.S.4    Nosil, P.5
  • 24
    • 77649219524 scopus 로고    scopus 로고
    • Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags
    • 20195501, . ().:.
    • Hohenlohe PA, Bassham S, Etter PD, Stiffler N, Johnson EA, et al. (2010) Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. PLoS Genet6: e1000862. doi: 10.1371/journal.pgen.100086220195501
    • (2010) PLoS Genet , vol.6 , pp. e1000862
    • Hohenlohe, P.A.1    Bassham, S.2    Etter, P.D.3    Stiffler, N.4    Johnson, E.A.5
  • 25
    • 84855708550 scopus 로고    scopus 로고
    • A genome-wide SNP genotyping array reveals patterns of global and repeated species-pair divergence in sticklebacks
    • 22197244, . ().:–.
    • Jones FC, Chan YF, Schmutz J, Grimwood J, Brady SD, et al. (2012) A genome-wide SNP genotyping array reveals patterns of global and repeated species-pair divergence in sticklebacks. Curr Biol22: 83–90. doi: 10.1016/j.cub.2011.11.04522197244
    • (2012) Curr Biol , vol.22 , pp. 83-90
    • Jones, F.C.1    Chan, Y.F.2    Schmutz, J.3    Grimwood, J.4    Brady, S.D.5
  • 26
    • 84859462157 scopus 로고    scopus 로고
    • The genomic basis of adaptive evolution in threespine sticklebacks
    • 22481358, . ().:–.
    • Jones FC, Grabherr MG, Chan YF, Russell P, Mauceli E, et al. (2012) The genomic basis of adaptive evolution in threespine sticklebacks. Nature484: 55–61. doi: 10.1038/nature1094422481358
    • (2012) Nature , vol.484 , pp. 55-61
    • Jones, F.C.1    Grabherr, M.G.2    Chan, Y.F.3    Russell, P.4    Mauceli, E.5
  • 27
    • 84255198561 scopus 로고    scopus 로고
    • Genome-wide patterns of divergence during speciation: the lake whitefish case study
    • 22201165, . ().:–.
    • Renaut S, Maillet N, Normandeau E, Sauvage C, Derome N, et al. (2012) Genome-wide patterns of divergence during speciation: the lake whitefish case study. Philos Trans R Soc Lond B Biol Sci367: 354–363. doi: 10.1098/rstb.2011.019722201165
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 354-363
    • Renaut, S.1    Maillet, N.2    Normandeau, E.3    Sauvage, C.4    Derome, N.5
  • 28
    • 84878589154 scopus 로고    scopus 로고
    • Genomic islands of divergence are not affected by geography of speciation in sunflowers
    • 23652015, . ().:.
    • Renaut S, Grassa CJ, Yeaman S, Moyers BT, Lai Z, et al. (2013) Genomic islands of divergence are not affected by geography of speciation in sunflowers. Nat Commun4: 1827. doi: 10.1038/ncomms283323652015
    • (2013) Nat Commun , vol.4 , pp. 1827
    • Renaut, S.1    Grassa, C.J.2    Yeaman, S.3    Moyers, B.T.4    Lai, Z.5
  • 29
    • 84900439893 scopus 로고    scopus 로고
    • Stick insect genomes reveal natural selection's role in parallel speciation
    • 24833390, . ().:–.
    • Soria-Carrasco V, Gompert Z, Comeault AA, Farkas TE, Parchman TL, et al. (2014) Stick insect genomes reveal natural selection's role in parallel speciation. Science344: 738–742. doi: 10.1126/science.125213624833390
    • (2014) Science , vol.344 , pp. 738-742
    • Soria-Carrasco, V.1    Gompert, Z.2    Comeault, A.A.3    Farkas, T.E.4    Parchman, T.L.5
  • 30
    • 84907867272 scopus 로고    scopus 로고
    • The genomic substrate for adaptive radiation in African cichlid fish
    • 25186727, . ().:–.
    • Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, et al. (2014) The genomic substrate for adaptive radiation in African cichlid fish. Nature513: 375–381. doi: 10.1038/nature1372625186727
    • (2014) Nature , vol.513 , pp. 375-381
    • Brawand, D.1    Wagner, C.E.2    Li, Y.I.3    Malinsky, M.4    Keller, I.5
  • 31
    • 58749092473 scopus 로고    scopus 로고
    • Divergent selection and heterogeneous genomic divergence
    • 19143936, ().:–.
    • Nosil P, Funk DJ, Ortiz-Barrientos D, (2009) Divergent selection and heterogeneous genomic divergence. Mol Ecol18: 375–402. doi: 10.1111/j.1365-294X.2008.03946.x19143936
    • (2009) Mol Ecol , vol.18 , pp. 375-402
    • Nosil, P.1    Funk, D.J.2    Ortiz-Barrientos, D.3
  • 32
    • 84862025426 scopus 로고    scopus 로고
    • Genome divergence during evolutionary diversification as revealed in replicate lake-stream stickleback population pairs
    • 22384978, ().:–.
    • Roesti M, Hendry AP, Salzburger W, Berner D, (2012) Genome divergence during evolutionary diversification as revealed in replicate lake-stream stickleback population pairs. Mol Ecol21: 2852–2862. doi: 10.1111/j.1365-294X.2012.05509.x22384978
    • (2012) Mol Ecol , vol.21 , pp. 2852-2862
    • Roesti, M.1    Hendry, A.P.2    Salzburger, W.3    Berner, D.4
  • 33
    • 84870297139 scopus 로고    scopus 로고
    • The genomic landscape of species divergence in Ficedula flycatchers
    • 23103876, . ().:–.
    • Ellegren H, Smeds L, Burri R, Olason PI, Backstrom N, et al. (2012) The genomic landscape of species divergence in Ficedula flycatchers. Nature491: 756–760. doi: 10.1038/nature1158423103876
    • (2012) Nature , vol.491 , pp. 756-760
    • Ellegren, H.1    Smeds, L.2    Burri, R.3    Olason, P.I.4    Backstrom, N.5
  • 34
    • 84886085175 scopus 로고    scopus 로고
    • Genome-wide evidence for speciation with gene flow in Heliconius butterflies
    • 24045163, . ().:–.
    • Martin SH, Dasmahapatra KK, Nadeau NJ, Salazar C, Walters JR, et al. (2013) Genome-wide evidence for speciation with gene flow in Heliconius butterflies. Genome Res23: 1817–1828. doi: 10.1101/gr.159426.11324045163
    • (2013) Genome Res , vol.23 , pp. 1817-1828
    • Martin, S.H.1    Dasmahapatra, K.K.2    Nadeau, N.J.3    Salazar, C.4    Walters, J.R.5
  • 35
    • 84923353165 scopus 로고    scopus 로고
    • Evolution of Darwin's finches and their beaks revealed by genome sequencing
    • 25686609, . ().:–.
    • Lamichhaney S, Berglund J, Almen MS, Maqbool K, Grabherr M, et al. (2015) Evolution of Darwin's finches and their beaks revealed by genome sequencing. Nature518: 371–375. doi: 10.1038/nature1418125686609
    • (2015) Nature , vol.518 , pp. 371-375
    • Lamichhaney, S.1    Berglund, J.2    Almen, M.S.3    Maqbool, K.4    Grabherr, M.5
  • 36
    • 84924357819 scopus 로고    scopus 로고
    • Genomics of divergence along a continuum of parapatric population differentiation
    • 25679225, . ().:.
    • Feulner PG, Chain FJ, Panchal M, Huang Y, Eizaguirre C, et al. (2015) Genomics of divergence along a continuum of parapatric population differentiation. PLoS Genet11: e1004966. doi: 10.1371/journal.pgen.100496625679225
    • (2015) PLoS Genet , vol.11 , pp. e1004966
    • Feulner, P.G.1    Chain, F.J.2    Panchal, M.3    Huang, Y.4    Eizaguirre, C.5
  • 37
    • 84255187780 scopus 로고    scopus 로고
    • Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes
    • 22201169, ().:–.
    • Hohenlohe PA, Bassham S, Currey M, Cresko WA, (2012) Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes. Philos Trans R Soc Lond B Biol Sci367: 395–408. doi: 10.1098/rstb.2011.024522201169
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 395-408
    • Hohenlohe, P.A.1    Bassham, S.2    Currey, M.3    Cresko, W.A.4
  • 38
    • 42449144387 scopus 로고    scopus 로고
    • Speciation with gene flow could be common
    • 18410295, ().:–.
    • Nosil P, (2008) Speciation with gene flow could be common. Mol Ecol17: 2103–2106. doi: 10.1111/j.1365-294X.2008.03715.x18410295
    • (2008) Mol Ecol , vol.17 , pp. 2103-2106
    • Nosil, P.1
  • 39
    • 70450233628 scopus 로고    scopus 로고
    • Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species
    • 19920849, ().:–.
    • Noor MA, Bennett SM, (2009) Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species. Heredity103: 439–444. doi: 10.1038/hdy.2009.15119920849
    • (2009) Heredity , vol.103 , pp. 439-444
    • Noor, M.A.1    Bennett, S.M.2
  • 40
    • 84903376433 scopus 로고    scopus 로고
    • Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
    • 24845075, ().:–.
    • Cruickshank TE, Hahn MW, (2014) Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow. Mol Ecol23: 3133–3157. doi: 10.1111/mec.1279624845075
    • (2014) Mol Ecol , vol.23 , pp. 3133-3157
    • Cruickshank, T.E.1    Hahn, M.W.2
  • 41
    • 33747180898 scopus 로고    scopus 로고
    • Evolutionary biology: how did the human species form?
    • 16920616, ():–.
    • Barton NH, (2006) Evolutionary biology: how did the human species form?Curr Biol16: R647–650. 16920616
    • (2006) Curr Biol , vol.16 , pp. R647-650
    • Barton, N.H.1
  • 42
    • 84878019197 scopus 로고    scopus 로고
    • Understanding the origin of species with genome-scale data: modelling gene flow
    • 23657479, ().:–.
    • Sousa V, Hey J, (2013) Understanding the origin of species with genome-scale data: modelling gene flow. Nat Rev Genet14: 404–414. doi: 10.1038/nrg344623657479
    • (2013) Nat Rev Genet , vol.14 , pp. 404-414
    • Sousa, V.1    Hey, J.2
  • 43
    • 0036775252 scopus 로고    scopus 로고
    • Speciation in nature: the threespine stickleback model systems
    • ().:–.
    • McKinnon JS, Rundle HD, (2002) Speciation in nature: the threespine stickleback model systems. Trends Ecol Evol17: 480–488.
    • (2002) Trends Ecol Evol , vol.17 , pp. 480-488
    • McKinnon, J.S.1    Rundle, H.D.2
  • 44
    • 84952705304 scopus 로고    scopus 로고
    • Evolution of stickleback in 50 years on earthquake-uplifted islands
    • 26668399, . ().:–.
    • Lescak EA, Bassham SL, Catchen J, Gelmond O, Sherbick ML, et al. (2015) Evolution of stickleback in 50 years on earthquake-uplifted islands. Proc Natl Acad Sci U S A112: E7204–7212. doi: 10.1073/pnas.151202011226668399
    • (2015) Proc Natl Acad Sci U S A , vol.112 , pp. E7204-7212
    • Lescak, E.A.1    Bassham, S.L.2    Catchen, J.3    Gelmond, O.4    Sherbick, M.L.5
  • 45
    • 84908326162 scopus 로고    scopus 로고
    • Fast evolution from precast bricks: genomics of young freshwater populations of threespine stickleback Gasterosteus aculeatus
    • 25299485, . ().:.
    • Terekhanova NV, Logacheva MD, Penin AA, Neretina TV, Barmintseva AE, et al. (2014) Fast evolution from precast bricks: genomics of young freshwater populations of threespine stickleback Gasterosteus aculeatus. PLoS Genet10: e1004696. doi: 10.1371/journal.pgen.100469625299485
    • (2014) PLoS Genet , vol.10 , pp. e1004696
    • Terekhanova, N.V.1    Logacheva, M.D.2    Penin, A.A.3    Neretina, T.V.4    Barmintseva, A.E.5
  • 46
    • 77956575325 scopus 로고    scopus 로고
    • Hybridization between distant lineages increases adaptive variation during a biological invasion: stickleback in Switzerland
    • 20735738, ().:–.
    • Lucek K, Roy D, Bezault E, Sivasundar A, Seehausen O, (2010) Hybridization between distant lineages increases adaptive variation during a biological invasion: stickleback in Switzerland. Mol Ecol19: 3995–4011. doi: 10.1111/j.1365-294X.2010.04781.x20735738
    • (2010) Mol Ecol , vol.19 , pp. 3995-4011
    • Lucek, K.1    Roy, D.2    Bezault, E.3    Sivasundar, A.4    Seehausen, O.5
  • 52
    • 84959908803 scopus 로고
    • Zum Vorkommen des Dreistachligen Stichlings (Gasterosteus aculeatus, Pisces: Gasterosteidae) im österreichischen Donauraum
    • ().:–.
    • Ahnelt H, (1986) Zum Vorkommen des Dreistachligen Stichlings (Gasterosteus aculeatus, Pisces: Gasterosteidae) im österreichischen Donauraum. Annalen des Naturhistorischen Museums in Wien88/89B: 309–314.
    • (1986) Annalen des Naturhistorischen Museums in Wien , vol.88/89B , pp. 309-314
    • Ahnelt, H.1
  • 53
    • 84946782276 scopus 로고    scopus 로고
    • The genomics of ecological vicariance in threespine stickleback fish
    • 26556609, ().:.
    • Roesti M, Kueng B, Moser D, Berner D, (2015) The genomics of ecological vicariance in threespine stickleback fish. Nat Commun6: 8767. doi: 10.1038/ncomms976726556609
    • (2015) Nat Commun , vol.6 , pp. 8767
    • Roesti, M.1    Kueng, B.2    Moser, D.3    Berner, D.4
  • 55
    • 84945299729 scopus 로고    scopus 로고
    • Hybrid 'superswarm' leads to rapid divergence and establishment of populations during a biological invasion
    • 26426979, ().:–.
    • Roy D, Lucek K, Walter RP, Seehausen O, (2015) Hybrid 'superswarm' leads to rapid divergence and establishment of populations during a biological invasion. Mol Ecol24: 5394–5411. doi: 10.1111/mec.1340526426979
    • (2015) Mol Ecol , vol.24 , pp. 5394-5411
    • Roy, D.1    Lucek, K.2    Walter, R.P.3    Seehausen, O.4
  • 56
    • 84870744342 scopus 로고    scopus 로고
    • Repeated lake-stream divergence in stickleback life history within a Central European lake basin
    • 23226528, ().:.
    • Moser D, Roesti M, Berner D, (2012) Repeated lake-stream divergence in stickleback life history within a Central European lake basin. PLoS One7: e50620. doi: 10.1371/journal.pone.005062023226528
    • (2012) PLoS One , vol.7 , pp. e50620
    • Moser, D.1    Roesti, M.2    Berner, D.3
  • 57
    • 78449272899 scopus 로고    scopus 로고
    • Constraints on speciation suggested by comparing lake-stream stickleback divergence across two continents
    • 20964754, ().:–.
    • Berner D, Roesti M, Hendry AP, Salzburger W, (2010) Constraints on speciation suggested by comparing lake-stream stickleback divergence across two continents. Mol Ecol19: 4963–4978. doi: 10.1111/j.1365-294X.2010.04858.x20964754
    • (2010) Mol Ecol , vol.19 , pp. 4963-4978
    • Berner, D.1    Roesti, M.2    Hendry, A.P.3    Salzburger, W.4
  • 58
    • 84869001481 scopus 로고    scopus 로고
    • Evidence of adaptive evolutionary divergence during biological invasion
    • 23152900, ().:.
    • Lucek K, Sivasundar A, Seehausen O, (2012) Evidence of adaptive evolutionary divergence during biological invasion. PLoS One7: e49377. doi: 10.1371/journal.pone.004937723152900
    • (2012) PLoS One , vol.7 , pp. e49377
    • Lucek, K.1    Sivasundar, A.2    Seehausen, O.3
  • 59
    • 84888068262 scopus 로고    scopus 로고
    • Repeated and predictable patterns of ecotypic differentiation during a biological invasion: lake-stream divergence in parapatric Swiss stickleback
    • 24164658, ().:–.
    • Lucek K, Sivasundar A, Roy D, Seehausen O, (2013) Repeated and predictable patterns of ecotypic differentiation during a biological invasion: lake-stream divergence in parapatric Swiss stickleback. J Evol Biol26: 2691–2709. doi: 10.1111/jeb.1226724164658
    • (2013) J Evol Biol , vol.26 , pp. 2691-2709
    • Lucek, K.1    Sivasundar, A.2    Roy, D.3    Seehausen, O.4
  • 60
    • 84939229279 scopus 로고    scopus 로고
    • Divergent macroparasite infections in parapatric Swiss lake-stream pairs of threespine stickleback (Gasterosteus aculeatus)
    • ().in press.
    • Karvonen A, Lucek K, Marques DA, Seehausen O, (2015) Divergent macroparasite infections in parapatric Swiss lake-stream pairs of threespine stickleback (Gasterosteus aculeatus). PLoS One in press.
    • (2015) PLoS One
    • Karvonen, A.1    Lucek, K.2    Marques, D.A.3    Seehausen, O.4
  • 61
    • 0001350117 scopus 로고
    • Evolution of variation and distributional patterns in European populations of 3-spined stickleback, Gasterosteus aculeatus
    • ().:–&.
    • Munzing J, (1963) Evolution of variation and distributional patterns in European populations of 3-spined stickleback, Gasterosteus aculeatus. Evolution17: 320–&.
    • (1963) Evolution , vol.17 , pp. 320
    • Munzing, J.1
  • 62
    • 85026957115 scopus 로고    scopus 로고
    • Welche Stichlingsart kommt in Österreich vor, Gasterosteus aculeatus oder Gasterosteus gymnurus?
    • ():–.
    • Kleinlercher G, Muerth P, Pohl H, Ahnelt H, (2008) Welche Stichlingsart kommt in Österreich vor, Gasterosteus aculeatus oder Gasterosteus gymnurus?Österreichs Fischerei61: 158–161.
    • (2008) Österreichs Fischerei , vol.61 , pp. 158-161
    • Kleinlercher, G.1    Muerth, P.2    Pohl, H.3    Ahnelt, H.4
  • 63
    • 33645864039 scopus 로고    scopus 로고
    • Genetic relationships among marine and freshwater populations of the European three-spined stickleback (Gasterosteus aculeatus) revealed by microsatellites
    • 16629808, ().:–.
    • Makinen HS, Cano JM, Merila J, (2006) Genetic relationships among marine and freshwater populations of the European three-spined stickleback (Gasterosteus aculeatus) revealed by microsatellites. Mol Ecol15: 1519–1534. 16629808
    • (2006) Mol Ecol , vol.15 , pp. 1519-1534
    • Makinen, H.S.1    Cano, J.M.2    Merila, J.3
  • 64
    • 37249086149 scopus 로고    scopus 로고
    • Mitochondrial DNA phylogeography of the three-spined stickleback (Gasterosteus aculeatus) in Europe-evidence for multiple glacial refugia
    • 17716925, ().:–.
    • Makinen HS, Merila J, (2008) Mitochondrial DNA phylogeography of the three-spined stickleback (Gasterosteus aculeatus) in Europe-evidence for multiple glacial refugia. Mol Phylogenet Evol46: 167–182. 17716925
    • (2008) Mol Phylogenet Evol , vol.46 , pp. 167-182
    • Makinen, H.S.1    Merila, J.2
  • 65
    • 84906829507 scopus 로고    scopus 로고
    • Disentangling the role of phenotypic plasticity and genetic divergence in contemporary ecotype formation during a biological invasion
    • 24766190, ().:–.
    • Lucek K, Sivasundar A, Seehausen O, (2014) Disentangling the role of phenotypic plasticity and genetic divergence in contemporary ecotype formation during a biological invasion. Evolution68: 2619–2632. doi: 10.1111/evo.1244324766190
    • (2014) Evolution , vol.68 , pp. 2619-2632
    • Lucek, K.1    Sivasundar, A.2    Seehausen, O.3
  • 66
    • 84871157927 scopus 로고    scopus 로고
    • Parallel and nonparallel ecological, morphological and genetic divergence in lake-stream stickleback from a single catchment
    • 23199201, ().:–.
    • Ravinet M, Prodohl PA, Harrod C, (2013) Parallel and nonparallel ecological, morphological and genetic divergence in lake-stream stickleback from a single catchment. J Evol Biol26: 186–204. doi: 10.1111/jeb.1204923199201
    • (2013) J Evol Biol , vol.26 , pp. 186-204
    • Ravinet, M.1    Prodohl, P.A.2    Harrod, C.3
  • 67
    • 0027444450 scopus 로고
    • Parapatric Lake and Stream Sticklebacks on Northern Vancouver Island—Disjunct Distribution or Parallel Evolution
    • ().:–.
    • Lavin PA, Mcphail JD, (1993) Parapatric Lake and Stream Sticklebacks on Northern Vancouver Island—Disjunct Distribution or Parallel Evolution. Can J Zool71: 11–17.
    • (1993) Can J Zool , vol.71 , pp. 11-17
    • Lavin, P.A.1    Mcphail, J.D.2
  • 68
    • 0035989033 scopus 로고    scopus 로고
    • Adaptive divergence and the balance between selection and gene flow: lake and stream stickleback in the Misty system
    • 12144020, ().:–.
    • Hendry AP, Taylor EB, McPhail JD, (2002) Adaptive divergence and the balance between selection and gene flow: lake and stream stickleback in the Misty system. Evolution56: 1199–1216. 12144020
    • (2002) Evolution , vol.56 , pp. 1199-1216
    • Hendry, A.P.1    Taylor, E.B.2    McPhail, J.D.3
  • 69
    • 67649425415 scopus 로고    scopus 로고
    • Variable progress toward ecological speciation in parapatry: stickleback across eight lake-stream transitions
    • 19228184, ().:–.
    • Berner D, Grandchamp AC, Hendry AP, (2009) Variable progress toward ecological speciation in parapatry: stickleback across eight lake-stream transitions. Evolution63: 1740–1753. doi: 10.1111/j.1558-5646.2009.00665.x19228184
    • (2009) Evolution , vol.63 , pp. 1740-1753
    • Berner, D.1    Grandchamp, A.C.2    Hendry, A.P.3
  • 70
    • 84857599761 scopus 로고    scopus 로고
    • Population genomics of parallel phenotypic evolution in stickleback across stream-lake ecological transitions
    • 21976692, . ().:–.
    • Deagle BE, Jones FC, Chan YF, Absher DM, Kingsley DM, et al. (2012) Population genomics of parallel phenotypic evolution in stickleback across stream-lake ecological transitions. Proc Biol Sci279: 1277–1286. doi: 10.1098/rspb.2011.155221976692
    • (2012) Proc Biol Sci , vol.279 , pp. 1277-1286
    • Deagle, B.E.1    Jones, F.C.2    Chan, Y.F.3    Absher, D.M.4    Kingsley, D.M.5
  • 71
    • 46749155137 scopus 로고    scopus 로고
    • Ecological predictions lead to the discovery of a benthic-limnetic sympatric species pair of threespine stickleback in Little Quarry Lake, British Columbia
    • ().:–.
    • Gow JL, Rogers SM, Jackson M, Schluter D, (2008) Ecological predictions lead to the discovery of a benthic-limnetic sympatric species pair of threespine stickleback in Little Quarry Lake, British Columbia. Can J Zool86: 564–571.
    • (2008) Can J Zool , vol.86 , pp. 564-571
    • Gow, J.L.1    Rogers, S.M.2    Jackson, M.3    Schluter, D.4
  • 72
    • 0034619866 scopus 로고    scopus 로고
    • Historical contingency and ecological determinism interact to prime speciation in sticklebacks, Gasterosteus
    • 11133026, ().:–.
    • Taylor EB, McPhail JD, (2000) Historical contingency and ecological determinism interact to prime speciation in sticklebacks, Gasterosteus. Proc Biol Sci267: 2375–2384. 11133026
    • (2000) Proc Biol Sci , vol.267 , pp. 2375-2384
    • Taylor, E.B.1    McPhail, J.D.2
  • 73
    • 84878461117 scopus 로고    scopus 로고
    • Special features of RAD Sequencing data: implications for genotyping
    • 23110438, . ().:–.
    • Davey JW, Cezard T, Fuentes-Utrilla P, Eland C, Gharbi K, et al. (2013) Special features of RAD Sequencing data: implications for genotyping. Molecular Ecology22: 3151–3164. doi: 10.1111/mec.1208423110438
    • (2013) Molecular Ecology , vol.22 , pp. 3151-3164
    • Davey, J.W.1    Cezard, T.2    Fuentes-Utrilla, P.3    Eland, C.4    Gharbi, K.5
  • 75
    • 84896902748 scopus 로고    scopus 로고
    • Recent novel approaches for population genomics data analysis
    • 24495199, ().:–.
    • Andrews KR, Luikart G, (2014) Recent novel approaches for population genomics data analysis. Molecular Ecology23: 1661–1667. doi: 10.1111/mec.1268624495199
    • (2014) Molecular Ecology , vol.23 , pp. 1661-1667
    • Andrews, K.R.1    Luikart, G.2
  • 76
    • 84858711967 scopus 로고    scopus 로고
    • Evolutionary forces shaping genomic islands of population differentiation in humans
    • 22439654, ().:.
    • Hofer T, Foll M, Excoffier L, (2012) Evolutionary forces shaping genomic islands of population differentiation in humans. BMC Genomics13: 107. doi: 10.1186/1471-2164-13-10722439654
    • (2012) BMC Genomics , vol.13 , pp. 107
    • Hofer, T.1    Foll, M.2    Excoffier, L.3
  • 77
    • 84878444624 scopus 로고    scopus 로고
    • Recombination in the threespine stickleback genome—patterns and consequences
    • 23601112, ().:–.
    • Roesti M, Moser D, Berner D, (2013) Recombination in the threespine stickleback genome—patterns and consequences. Mol Ecol22: 3014–3027. doi: 10.1111/mec.1232223601112
    • (2013) Mol Ecol , vol.22 , pp. 3014-3027
    • Roesti, M.1    Moser, D.2    Berner, D.3
  • 78
    • 0035924332 scopus 로고    scopus 로고
    • The genetic architecture of divergence between threespine stickleback species
    • 11780061, . ().:–.
    • Peichel CL, Nereng KS, Ohgi KA, Cole BL, Colosimo PF, et al. (2001) The genetic architecture of divergence between threespine stickleback species. Nature414: 901–905. 11780061
    • (2001) Nature , vol.414 , pp. 901-905
    • Peichel, C.L.1    Nereng, K.S.2    Ohgi, K.A.3    Cole, B.L.4    Colosimo, P.F.5
  • 79
    • 19344367109 scopus 로고    scopus 로고
    • The genetic architecture of parallel armor plate reduction in threespine sticklebacks
    • 15069472, . ().:.
    • Colosimo PF, Peichel CL, Nereng K, Blackman BK, Shapiro MD, et al. (2004) The genetic architecture of parallel armor plate reduction in threespine sticklebacks. PLoS Biol2: E109. 15069472
    • (2004) PLoS Biol , vol.2 , pp. E109
    • Colosimo, P.F.1    Peichel, C.L.2    Nereng, K.3    Blackman, B.K.4    Shapiro, M.D.5
  • 80
    • 1942469390 scopus 로고    scopus 로고
    • Parallel genetic basis for repeated evolution of armor loss in Alaskan threespine stickleback populations
    • 15069186, . ().:–.
    • Cresko WA, Amores A, Wilson C, Murphy J, Currey M, et al. (2004) Parallel genetic basis for repeated evolution of armor loss in Alaskan threespine stickleback populations. Proc Natl Acad Sci U S A101: 6050–6055. 15069186
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 6050-6055
    • Cresko, W.A.1    Amores, A.2    Wilson, C.3    Murphy, J.4    Currey, M.5
  • 81
    • 1942455815 scopus 로고    scopus 로고
    • Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks
    • 15085123, . ().:–.
    • Shapiro MD, Marks ME, Peichel CL, Blackman BK, Nereng KS, et al. (2004) Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks. Nature428: 717–723. 15085123
    • (2004) Nature , vol.428 , pp. 717-723
    • Shapiro, M.D.1    Marks, M.E.2    Peichel, C.L.3    Blackman, B.K.4    Nereng, K.S.5
  • 82
    • 20144371089 scopus 로고    scopus 로고
    • Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles
    • 15790847, . ().:–.
    • Colosimo PF, Hosemann KE, Balabhadra S, Villarreal G, Jr.Dickson M, et al. (2005) Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles. Science307: 1928–1933. 15790847
    • (2005) Science , vol.307 , pp. 1928-1933
    • Colosimo, P.F.1    Hosemann, K.E.2    Balabhadra, S.3    Villarreal, G.4    Dickson, M.5
  • 83
    • 17644375490 scopus 로고    scopus 로고
    • Evolution and development of facial bone morphology in threespine sticklebacks
    • 15824312, . ().:–.
    • Kimmel CB, Ullmann B, Walker C, Wilson C, Currey M, et al. (2005) Evolution and development of facial bone morphology in threespine sticklebacks. Proc Natl Acad Sci U S A102: 5791–5796. 15824312
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 5791-5796
    • Kimmel, C.B.1    Ullmann, B.2    Walker, C.3    Wilson, C.4    Currey, M.5
  • 84
    • 34848853261 scopus 로고    scopus 로고
    • Parallel evolution of Pitx1 underlies pelvic reduction in Scottish threespine stickleback (Gasterosteus aculeatus)
    • 17693397, ().:–.
    • Coyle SM, Huntingford FA, Peichel CL, (2007) Parallel evolution of Pitx1 underlies pelvic reduction in Scottish threespine stickleback (Gasterosteus aculeatus). J Hered98: 581–586. 17693397
    • (2007) J Hered , vol.98 , pp. 581-586
    • Coyle, S.M.1    Huntingford, F.A.2    Peichel, C.L.3
  • 85
    • 36849071407 scopus 로고    scopus 로고
    • cis-Regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans
    • 18083106, . ().:–.
    • Miller CT, Beleza S, Pollen AA, Schluter D, Kittles RA, et al. (2007) cis-Regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans. Cell131: 1179–1189. 18083106
    • (2007) Cell , vol.131 , pp. 1179-1189
    • Miller, C.T.1    Beleza, S.2    Pollen, A.A.3    Schluter, D.4    Kittles, R.A.5
  • 86
    • 37749032917 scopus 로고    scopus 로고
    • The genetics of adaptive shape shift in stickleback: pleiotropy and effect size
    • 18005154, . ().:–.
    • Albert AY, Sawaya S, Vines TH, Knecht AK, Miller CT, et al. (2008) The genetics of adaptive shape shift in stickleback: pleiotropy and effect size. Evolution62: 76–85. 18005154
    • (2008) Evolution , vol.62 , pp. 76-85
    • Albert, A.Y.1    Sawaya, S.2    Vines, T.H.3    Knecht, A.K.4    Miller, C.T.5
  • 87
    • 77957745240 scopus 로고    scopus 로고
    • From trait to base pairs: Parallel evolution of pelvic reduction in three-spined sticklebacks occurs by repeated deletion of a tissue-specific pelvic enhancer at Pitx1
    • . ().:–.
    • Chan YF, Villarreal G, Marks M, Shapiro M, Jones F, et al. (2009) From trait to base pairs: Parallel evolution of pelvic reduction in three-spined sticklebacks occurs by repeated deletion of a tissue-specific pelvic enhancer at Pitx1. Mech Develop126: S14–S15.
    • (2009) Mech Develop , vol.126 , pp. S14-S15
    • Chan, Y.F.1    Villarreal, G.2    Marks, M.3    Shapiro, M.4    Jones, F.5
  • 88
    • 79960697527 scopus 로고    scopus 로고
    • The genetic basis of divergent pigment patterns in juvenile threespine sticklebacks
    • 21304547, . ().:–.
    • Greenwood AK, Jones FC, Chan YF, Brady SD, Absher DM, et al. (2011) The genetic basis of divergent pigment patterns in juvenile threespine sticklebacks. Heredity107: 155–166. doi: 10.1038/hdy.2011.121304547
    • (2011) Heredity , vol.107 , pp. 155-166
    • Greenwood, A.K.1    Jones, F.C.2    Chan, Y.F.3    Brady, S.D.4    Absher, D.M.5
  • 89
    • 84867666636 scopus 로고    scopus 로고
    • Admixture mapping of male nuptial colour and body shape in a recently formed hybrid population of threespine stickleback
    • 22681397, ().:–.
    • Malek TB, Boughman JW, Dworkin I, Peichel CL, (2012) Admixture mapping of male nuptial colour and body shape in a recently formed hybrid population of threespine stickleback. Mol Ecol21: 5265–5279. doi: 10.1111/j.1365-294X.2012.05660.x22681397
    • (2012) Mol Ecol , vol.21 , pp. 5265-5279
    • Malek, T.B.1    Boughman, J.W.2    Dworkin, I.3    Peichel, C.L.4
  • 90
    • 84864322203 scopus 로고    scopus 로고
    • Genetic signature of adaptive peak shift in threespine stickleback
    • 22834743, . ().:–.
    • Rogers SM, Tamkee P, Summers B, Balabahadra S, Marks M, et al. (2012) Genetic signature of adaptive peak shift in threespine stickleback. Evolution66: 2439–2450. doi: 10.1111/j.1558-5646.2012.01622.x22834743
    • (2012) Evolution , vol.66 , pp. 2439-2450
    • Rogers, S.M.1    Tamkee, P.2    Summers, B.3    Balabahadra, S.4    Marks, M.5
  • 91
    • 84883167399 scopus 로고    scopus 로고
    • Genetic architecture of variation in the lateral line sensory system of threespine sticklebacks
    • 22973542, . ().:–.
    • Wark AR, Mills MG, Dang LH, Chan YF, Jones FC, et al. (2012) Genetic architecture of variation in the lateral line sensory system of threespine sticklebacks. G32: 1047–1056. doi: 10.1534/g3.112.00307922973542
    • (2012) G3 , vol.2 , pp. 1047-1056
    • Wark, A.R.1    Mills, M.G.2    Dang, L.H.3    Chan, Y.F.4    Jones, F.C.5
  • 92
    • 84885318589 scopus 로고    scopus 로고
    • Genetic and neural modularity underlie the evolution of schooling behavior in threespine sticklebacks
    • 24035541, ().:–.
    • Greenwood AK, Wark AR, Yoshida K, Peichel CL, (2013) Genetic and neural modularity underlie the evolution of schooling behavior in threespine sticklebacks. Curr Biol23: 1884–1888. doi: 10.1016/j.cub.2013.07.05824035541
    • (2013) Curr Biol , vol.23 , pp. 1884-1888
    • Greenwood, A.K.1    Wark, A.R.2    Yoshida, K.3    Peichel, C.L.4
  • 93
    • 84904507916 scopus 로고    scopus 로고
    • Genetics of ecological divergence during speciation
    • 24909991, . ().:–.
    • Arnegard ME, McGee MD, Matthews B, Marchinko KB, Conte GL, et al. (2014) Genetics of ecological divergence during speciation. Nature511: 307–311. doi: 10.1038/nature1330124909991
    • (2014) Nature , vol.511 , pp. 307-311
    • Arnegard, M.E.1    McGee, M.D.2    Matthews, B.3    Marchinko, K.B.4    Conte, G.L.5
  • 94
    • 84901693332 scopus 로고    scopus 로고
    • Genetic architecture of skeletal evolution in European lake and stream stickleback
    • 24571250, ().:–.
    • Berner D, Moser D, Roesti M, Buescher H, Salzburger W, (2014) Genetic architecture of skeletal evolution in European lake and stream stickleback. Evolution68: 1792–1805. doi: 10.1111/evo.1239024571250
    • (2014) Evolution , vol.68 , pp. 1792-1805
    • Berner, D.1    Moser, D.2    Roesti, M.3    Buescher, H.4    Salzburger, W.5
  • 95
    • 84898900381 scopus 로고    scopus 로고
    • Identification of major and minor QTL for ecologically important morphological traits in three-spined sticklebacks (Gasterosteus aculeatus)
    • 24531726, . ().:–.
    • Liu J, Shikano T, Leinonen T, Cano JM, Li MH, et al. (2014) Identification of major and minor QTL for ecologically important morphological traits in three-spined sticklebacks (Gasterosteus aculeatus). G34: 595–604. doi: 10.1534/g3.114.01038924531726
    • (2014) G3 , vol.4 , pp. 595-604
    • Liu, J.1    Shikano, T.2    Leinonen, T.3    Cano, J.M.4    Li, M.H.5
  • 96
    • 84901338544 scopus 로고    scopus 로고
    • Modular skeletal evolution in sticklebacks is controlled by additive and clustered quantitative trait Loci
    • 24652999, . ().:–.
    • Miller CT, Glazer AM, Summers BR, Blackman BK, Norman AR, et al. (2014) Modular skeletal evolution in sticklebacks is controlled by additive and clustered quantitative trait Loci. Genetics197: 405–420. doi: 10.1534/genetics.114.16242024652999
    • (2014) Genetics , vol.197 , pp. 405-420
    • Miller, C.T.1    Glazer, A.M.2    Summers, B.R.3    Blackman, B.K.4    Norman, A.R.5
  • 97
    • 84907212410 scopus 로고    scopus 로고
    • Evolved tooth gain in sticklebacks is associated with a cis-regulatory allele of Bmp6
    • 25205810, . ().:–.
    • Cleves PA, Ellis NA, Jimenez MT, Nunez SM, Schluter D, et al. (2014) Evolved tooth gain in sticklebacks is associated with a cis-regulatory allele of Bmp6. Proc Natl Acad Sci U S A111: 13912–13917. doi: 10.1073/pnas.140756711125205810
    • (2014) Proc Natl Acad Sci U S A , vol.111 , pp. 13912-13917
    • Cleves, P.A.1    Ellis, N.A.2    Jimenez, M.T.3    Nunez, S.M.4    Schluter, D.5
  • 98
    • 84901280416 scopus 로고    scopus 로고
    • Parallel developmental genetic features underlie stickleback gill raker evolution
    • 24851181, ().:.
    • Glazer AM, Cleves PA, Erickson PA, Lam AY, Miller CT, (2014) Parallel developmental genetic features underlie stickleback gill raker evolution. Evodevo5: 19. doi: 10.1186/2041-9139-5-1924851181
    • (2014) Evodevo , vol.5 , pp. 19
    • Glazer, A.M.1    Cleves, P.A.2    Erickson, P.A.3    Lam, A.Y.4    Miller, C.T.5
  • 99
    • 85003045394 scopus 로고    scopus 로고
    • Two developmentally temporal quantitative trait loci underlie convergent evolution of increased branchial bone length in sticklebacks
    • 24966315, ().:.
    • Erickson PA, Glazer AM, Cleves PA, Smith AS, Miller CT, (2014) Two developmentally temporal quantitative trait loci underlie convergent evolution of increased branchial bone length in sticklebacks. Proc Biol Sci281: 20140822. doi: 10.1098/rspb.2014.082224966315
    • (2014) Proc Biol Sci , vol.281 , pp. 20140822
    • Erickson, P.A.1    Glazer, A.M.2    Cleves, P.A.3    Smith, A.S.4    Miller, C.T.5
  • 100
    • 84937824356 scopus 로고    scopus 로고
    • Distinct developmental genetic mechanisms underlie convergently evolved tooth gain in sticklebacks
    • 26062935, . ().:–.
    • Ellis NA, Glazer AM, Donde NN, Cleves PA, Agoglia RM, et al. (2015) Distinct developmental genetic mechanisms underlie convergently evolved tooth gain in sticklebacks. Development142: 2442–2451. doi: 10.1242/dev.12424826062935
    • (2015) Development , vol.142 , pp. 2442-2451
    • Ellis, N.A.1    Glazer, A.M.2    Donde, N.N.3    Cleves, P.A.4    Agoglia, R.M.5
  • 101
    • 84929292443 scopus 로고    scopus 로고
    • A 190 base pair, TGF-beta responsive tooth and fin enhancer is required for stickleback Bmp6 expression
    • 25732776, . ().:–.
    • Erickson PA, Cleves PA, Ellis NA, Schwalbach KT, Hart JC, et al. (2015) A 190 base pair, TGF-beta responsive tooth and fin enhancer is required for stickleback Bmp6 expression. Dev Biol401: 310–323. doi: 10.1016/j.ydbio.2015.02.00625732776
    • (2015) Dev Biol , vol.401 , pp. 310-323
    • Erickson, P.A.1    Cleves, P.A.2    Ellis, N.A.3    Schwalbach, K.T.4    Hart, J.C.5
  • 102
    • 84937544080 scopus 로고    scopus 로고
    • Genome Assembly Improvement and Mapping Convergently Evolved Skeletal Traits in Sticklebacks with Genotyping-by-Sequencing
    • ().:–.
    • Glazer AM, Killingbeck EE, Mitros T, Rokhsar DS, Miller CT, (2015) Genome Assembly Improvement and Mapping Convergently Evolved Skeletal Traits in Sticklebacks with Genotyping-by-Sequencing. G3 (Bethesda)5: 1463–1472.
    • (2015) G3 (Bethesda) , vol.5 , pp. 1463-1472
    • Glazer, A.M.1    Killingbeck, E.E.2    Mitros, T.3    Rokhsar, D.S.4    Miller, C.T.5
  • 103
    • 84929845103 scopus 로고    scopus 로고
    • Genetic mapping of natural variation in schooling tendency in the threespine stickleback
    • . ().:–.
    • Greenwood AK, Ardekani R, McCann SR, Dubin ME, Sullivan A, et al. (2015) Genetic mapping of natural variation in schooling tendency in the threespine stickleback. G3 (Bethesda)5: 761–769.
    • (2015) G3 (Bethesda) , vol.5 , pp. 761-769
    • Greenwood, A.K.1    Ardekani, R.2    McCann, S.R.3    Dubin, M.E.4    Sullivan, A.5
  • 104
    • 78651364359 scopus 로고    scopus 로고
    • ZFIN: enhancements and updates to the Zebrafish Model Organism Database
    • 21036866, . ().:–.
    • Bradford Y, Conlin T, Dunn N, Fashena D, Frazer K, et al. (2011) ZFIN: enhancements and updates to the Zebrafish Model Organism Database. Nucleic Acids Res39: D822–829. doi: 10.1093/nar/gkq107721036866
    • (2011) Nucleic Acids Res , vol.39 , pp. D822-829
    • Bradford, Y.1    Conlin, T.2    Dunn, N.3    Fashena, D.4    Frazer, K.5
  • 106
    • 0036613512 scopus 로고    scopus 로고
    • Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development
    • 12006978, . ().:–.
    • Golling G, Amsterdam A, Sun Z, Antonelli M, Maldonado E, et al. (2002) Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development. Nat Genet31: 135–140. 12006978
    • (2002) Nat Genet , vol.31 , pp. 135-140
    • Golling, G.1    Amsterdam, A.2    Sun, Z.3    Antonelli, M.4    Maldonado, E.5
  • 107
    • 79955805644 scopus 로고    scopus 로고
    • Growth plate regulation and osteochondroma formation: insights from tracing proteoglycans in zebrafish models and human cartilage
    • 21506131, ().:–.
    • de Andrea CE, Prins FA, Wiweger MI, Hogendoorn PC, (2011) Growth plate regulation and osteochondroma formation: insights from tracing proteoglycans in zebrafish models and human cartilage. J Pathol224: 160–168. doi: 10.1002/path.288621506131
    • (2011) J Pathol , vol.224 , pp. 160-168
    • de Andrea, C.E.1    Prins, F.A.2    Wiweger, M.I.3    Hogendoorn, P.C.4
  • 108
    • 79551706241 scopus 로고    scopus 로고
    • Cartilage ultrastructure in proteoglycan-deficient zebrafish mutants brings to light new candidate genes for human skeletal disorders
    • 21294126, . ().:–.
    • Wiweger MI, Avramut CM, de Andrea CE, Prins FA, Koster AJ, et al. (2011) Cartilage ultrastructure in proteoglycan-deficient zebrafish mutants brings to light new candidate genes for human skeletal disorders. J Pathol223: 531–542. doi: 10.1002/path.282421294126
    • (2011) J Pathol , vol.223 , pp. 531-542
    • Wiweger, M.I.1    Avramut, C.M.2    de Andrea, C.E.3    Prins, F.A.4    Koster, A.J.5
  • 109
    • 84866941195 scopus 로고    scopus 로고
    • On the roles and regulation of chondroitin sulfate and heparan sulfate in zebrafish pharyngeal cartilage morphogenesis
    • 22869369, . ().:–.
    • Holmborn K, Habicher J, Kasza Z, Eriksson AS, Filipek-Gorniok B, et al. (2012) On the roles and regulation of chondroitin sulfate and heparan sulfate in zebrafish pharyngeal cartilage morphogenesis. J Biol Chem287: 33905–33916. 22869369
    • (2012) J Biol Chem , vol.287 , pp. 33905-33916
    • Holmborn, K.1    Habicher, J.2    Kasza, Z.3    Eriksson, A.S.4    Filipek-Gorniok, B.5
  • 110
    • 12644260470 scopus 로고    scopus 로고
    • Genetic analysis of fin formation in the zebrafish, Danio rerio
    • 9007245, . ().:–.
    • van Eeden FJ, Granato M, Schach U, Brand M, Furutani-Seiki M, et al. (1996) Genetic analysis of fin formation in the zebrafish, Danio rerio. Development123: 255–262. 9007245
    • (1996) Development , vol.123 , pp. 255-262
    • van Eeden, F.J.1    Granato, M.2    Schach, U.3    Brand, M.4    Furutani-Seiki, M.5
  • 111
    • 0032533299 scopus 로고    scopus 로고
    • The shaping of pharyngeal cartilages during early development of the zebrafish
    • 9808777, . ().:–.
    • Kimmel CB, Miller CT, Kruze G, Ullmann B, BreMiller RA, et al. (1998) The shaping of pharyngeal cartilages during early development of the zebrafish. Dev Biol203: 245–263. 9808777
    • (1998) Dev Biol , vol.203 , pp. 245-263
    • Kimmel, C.B.1    Miller, C.T.2    Kruze, G.3    Ullmann, B.4    BreMiller, R.A.5
  • 112
    • 0037384993 scopus 로고    scopus 로고
    • Endothelin 1-mediated regulation of pharyngeal bone development in zebrafish
    • 12588850, ().:–.
    • Kimmel CB, Ullmann B, Walker M, Miller CT, Crump JG, (2003) Endothelin 1-mediated regulation of pharyngeal bone development in zebrafish. Development130: 1339–1351. 12588850
    • (2003) Development , vol.130 , pp. 1339-1351
    • Kimmel, C.B.1    Ullmann, B.2    Walker, M.3    Miller, C.T.4    Crump, J.G.5
  • 113
    • 33947159616 scopus 로고    scopus 로고
    • phospholipase C, beta 3 is required for Endothelin1 regulation of pharyngeal arch patterning in zebrafish
    • 17239364, ().:–.
    • Walker MB, Miller CT, Swartz ME, Eberhart JK, Kimmel CB, (2007) phospholipase C, beta 3 is required for Endothelin1 regulation of pharyngeal arch patterning in zebrafish. Dev Biol304: 194–207. 17239364
    • (2007) Dev Biol , vol.304 , pp. 194-207
    • Walker, M.B.1    Miller, C.T.2    Swartz, M.E.3    Eberhart, J.K.4    Kimmel, C.B.5
  • 114
    • 69049095026 scopus 로고    scopus 로고
    • Control of extracellular matrix assembly along tissue boundaries via Integrin and Eph/Ephrin signaling
    • 19641014, ().:–.
    • Julich D, Mould AP, Koper E, Holley SA, (2009) Control of extracellular matrix assembly along tissue boundaries via Integrin and Eph/Ephrin signaling. Development136: 2913–2921. doi: 10.1242/dev.03893519641014
    • (2009) Development , vol.136 , pp. 2913-2921
    • Julich, D.1    Mould, A.P.2    Koper, E.3    Holley, S.A.4
  • 115
    • 84871191358 scopus 로고    scopus 로고
    • Integrin alpha5/fibronectin1 and focal adhesion kinase are required for lens fiber morphogenesis in zebrafish
    • 23097490, . ().:–.
    • Hayes JM, Hartsock A, Clark BS, Napier HR, Link BA, et al. (2012) Integrin alpha5/fibronectin1 and focal adhesion kinase are required for lens fiber morphogenesis in zebrafish. Mol Biol Cell23: 4725–4738. doi: 10.1091/mbc.E12-09-067223097490
    • (2012) Mol Biol Cell , vol.23 , pp. 4725-4738
    • Hayes, J.M.1    Hartsock, A.2    Clark, B.S.3    Napier, H.R.4    Link, B.A.5
  • 116
    • 84922325674 scopus 로고    scopus 로고
    • Dosage changes of a segment at 17p13.1 lead to intellectual disability and microcephaly as a result of complex genetic interaction of multiple genes
    • 25439725, . ().:–.
    • Carvalho CM, Vasanth S, Shinawi M, Russell C, Ramocki MB, et al. (2014) Dosage changes of a segment at 17p13.1 lead to intellectual disability and microcephaly as a result of complex genetic interaction of multiple genes. Am J Hum Genet95: 565–578. doi: 10.1016/j.ajhg.2014.10.00625439725
    • (2014) Am J Hum Genet , vol.95 , pp. 565-578
    • Carvalho, C.M.1    Vasanth, S.2    Shinawi, M.3    Russell, C.4    Ramocki, M.B.5
  • 117
    • 85027919816 scopus 로고    scopus 로고
    • PI4K2beta/AP-1-based TGN-endosomal sorting regulates Wnt signaling
    • 24206846, . ().:–.
    • Wieffer M, Cibrian Uhalte E, Posor Y, Otten C, Branz K, et al. (2013) PI4K2beta/AP-1-based TGN-endosomal sorting regulates Wnt signaling. Curr Biol23: 2185–2190. doi: 10.1016/j.cub.2013.09.01724206846
    • (2013) Curr Biol , vol.23 , pp. 2185-2190
    • Wieffer, M.1    Cibrian, U.E.2    Posor, Y.3    Otten, C.4    Branz, K.5
  • 118
    • 79958187875 scopus 로고    scopus 로고
    • Nrdp1 governs differentiation of the melanocyte lineage via Erbb3b signaling in the zebrafish embryogenesis
    • 21596016, ().:–.
    • Maddirevula S, Anuppalle M, Huh TL, Kim SH, Rhee M, (2011) Nrdp1 governs differentiation of the melanocyte lineage via Erbb3b signaling in the zebrafish embryogenesis. Biochem Biophys Res Commun409: 454–458. doi: 10.1016/j.bbrc.2011.05.02521596016
    • (2011) Biochem Biophys Res Commun , vol.409 , pp. 454-458
    • Maddirevula, S.1    Anuppalle, M.2    Huh, T.L.3    Kim, S.H.4    Rhee, M.5
  • 119
    • 77952354471 scopus 로고    scopus 로고
    • Genetic analysis of fin development in zebrafish identifies furin and hemicentin1 as potential novel fraser syndrome disease genes
    • 20419147, . ().:.
    • Carney TJ, Feitosa NM, Sonntag C, Slanchev K, Kluger J, et al. (2010) Genetic analysis of fin development in zebrafish identifies furin and hemicentin1 as potential novel fraser syndrome disease genes. PLoS Genet6: e1000907. doi: 10.1371/journal.pgen.100090720419147
    • (2010) PLoS Genet , vol.6 , pp. e1000907
    • Carney, T.J.1    Feitosa, N.M.2    Sonntag, C.3    Slanchev, K.4    Kluger, J.5
  • 120
    • 42749084464 scopus 로고    scopus 로고
    • Mutation in the human homeobox gene NKX5-3 causes an oculo-auricular syndrome
    • 18423520, . ().:–.
    • Schorderet DF, Nichini O, Boisset G, Polok B, Tiab L, et al. (2008) Mutation in the human homeobox gene NKX5-3 causes an oculo-auricular syndrome. Am J Hum Genet82: 1178–1184. doi: 10.1016/j.ajhg.2008.03.00718423520
    • (2008) Am J Hum Genet , vol.82 , pp. 1178-1184
    • Schorderet, D.F.1    Nichini, O.2    Boisset, G.3    Polok, B.4    Tiab, L.5
  • 121
    • 84868491261 scopus 로고    scopus 로고
    • Zebrafish hmx1 promotes retinogenesis
    • 23068565, ().:–.
    • Boisset G, Schorderet DF, (2012) Zebrafish hmx1 promotes retinogenesis. Exp Eye Res105: 34–42. doi: 10.1016/j.exer.2012.10.00223068565
    • (2012) Exp Eye Res , vol.105 , pp. 34-42
    • Boisset, G.1    Schorderet, D.F.2
  • 122
    • 78651440103 scopus 로고    scopus 로고
    • Alternative developmental pathways and the propensity to migrate: a case study in the Atlantic salmon
    • 21044203, . ().:–.
    • Paez DJ, Brisson-Bonenfant C, Rossignol O, Guderley HE, Bernatchez L, et al. (2011) Alternative developmental pathways and the propensity to migrate: a case study in the Atlantic salmon. J Evol Biol24: 245–255. doi: 10.1111/j.1420-9101.2010.02159.x21044203
    • (2011) J Evol Biol , vol.24 , pp. 245-255
    • Paez, D.J.1    Brisson-Bonenfant, C.2    Rossignol, O.3    Guderley, H.E.4    Bernatchez, L.5
  • 124
    • 40849145949 scopus 로고    scopus 로고
    • Hitchhiking mapping reveals a candidate genomic region for natural selection in three-spined stickleback chromosome VIII
    • 18202387, ().:–.
    • Makinen HS, Shikano T, Cano JM, Merila J, (2008) Hitchhiking mapping reveals a candidate genomic region for natural selection in three-spined stickleback chromosome VIII. Genetics178: 453–465. doi: 10.1534/genetics.107.07878218202387
    • (2008) Genetics , vol.178 , pp. 453-465
    • Makinen, H.S.1    Shikano, T.2    Cano, J.M.3    Merila, J.4
  • 125
    • 47649114360 scopus 로고    scopus 로고
    • Identifying footprints of directional and balancing selection in marine and freshwater three-spined stickleback (Gasterosteus aculeatus) populations
    • 18312551, ().:–.
    • Makinen HS, Cano JM, Merila J, (2008) Identifying footprints of directional and balancing selection in marine and freshwater three-spined stickleback (Gasterosteus aculeatus) populations. Mol Ecol17: 3565–3582. doi: 10.1111/j.1365-294X.2008.03714.x18312551
    • (2008) Mol Ecol , vol.17 , pp. 3565-3582
    • Makinen, H.S.1    Cano, J.M.2    Merila, J.3
  • 126
    • 78650107391 scopus 로고    scopus 로고
    • Adaptive divergence in the thyroid hormone signaling pathway in the stickleback radiation
    • 21093265, . ().:–.
    • Kitano J, Lema SC, Luckenbach JA, Mori S, Kawagishi Y, et al. (2010) Adaptive divergence in the thyroid hormone signaling pathway in the stickleback radiation. Curr Biol20: 2124–2130. doi: 10.1016/j.cub.2010.10.05021093265
    • (2010) Curr Biol , vol.20 , pp. 2124-2130
    • Kitano, J.1    Lema, S.C.2    Luckenbach, J.A.3    Mori, S.4    Kawagishi, Y.5
  • 127
    • 79958024366 scopus 로고    scopus 로고
    • Global analysis of genes involved in freshwater adaptation in threespine sticklebacks (Gasterosteus aculeatus)
    • 21644964, ().:–.
    • DeFaveri J, Shikano T, Shimada Y, Goto A, Merila J, (2011) Global analysis of genes involved in freshwater adaptation in threespine sticklebacks (Gasterosteus aculeatus). Evolution65: 1800–1807. doi: 10.1111/j.1558-5646.2011.01247.x21644964
    • (2011) Evolution , vol.65 , pp. 1800-1807
    • DeFaveri, J.1    Shikano, T.2    Shimada, Y.3    Goto, A.4    Merila, J.5
  • 128
    • 78650468891 scopus 로고    scopus 로고
    • A high incidence of selection on physiologically important genes in the three-spined stickleback, Gasterosteus aculeatus
    • 20660084, ().:–.
    • Shimada Y, Shikano T, Merila J, (2011) A high incidence of selection on physiologically important genes in the three-spined stickleback, Gasterosteus aculeatus. Mol Biol Evol28: 181–193. doi: 10.1093/molbev/msq18120660084
    • (2011) Mol Biol Evol , vol.28 , pp. 181-193
    • Shimada, Y.1    Shikano, T.2    Merila, J.3
  • 129
    • 84863592418 scopus 로고    scopus 로고
    • Molecular and developmental contributions to divergent pigment patterns in marine and freshwater sticklebacks
    • 22765206, ().:–.
    • Greenwood AK, Cech JN, Peichel CL, (2012) Molecular and developmental contributions to divergent pigment patterns in marine and freshwater sticklebacks. Evol Dev14: 351–362. doi: 10.1111/j.1525-142X.2012.00553.x22765206
    • (2012) Evol Dev , vol.14 , pp. 351-362
    • Greenwood, A.K.1    Cech, J.N.2    Peichel, C.L.3
  • 130
    • 84856270961 scopus 로고    scopus 로고
    • Parallel and nonparallel aspects of ecological, phenotypic, and genetic divergence across replicate population pairs of lake and stream stickleback
    • 22276537, ().:–.
    • Kaeuffer R, Peichel CL, Bolnick DI, Hendry AP, (2012) Parallel and nonparallel aspects of ecological, phenotypic, and genetic divergence across replicate population pairs of lake and stream stickleback. Evolution66: 402–418. doi: 10.1111/j.1558-5646.2011.01440.x22276537
    • (2012) Evolution , vol.66 , pp. 402-418
    • Kaeuffer, R.1    Peichel, C.L.2    Bolnick, D.I.3    Hendry, A.P.4
  • 131
    • 84875527393 scopus 로고    scopus 로고
    • RNA sequencing reveals small RNAs differentially expressed between incipient Japanese threespine sticklebacks
    • 23547919, ().:.
    • Kitano J, Yoshida K, Suzuki Y, (2013) RNA sequencing reveals small RNAs differentially expressed between incipient Japanese threespine sticklebacks. BMC Genomics14: 214. doi: 10.1186/1471-2164-14-21423547919
    • (2013) BMC Genomics , vol.14 , pp. 214
    • Kitano, J.1    Yoshida, K.2    Suzuki, Y.3
  • 132
    • 84928524608 scopus 로고    scopus 로고
    • Population genomic evidence for adaptive differentiation in Baltic Sea three-spined sticklebacks
    • 25857931, ().:.
    • Guo B, DeFaveri J, Sotelo G, Nair A, Merila J, (2015) Population genomic evidence for adaptive differentiation in Baltic Sea three-spined sticklebacks. BMC Biol13: 19. doi: 10.1186/s12915-015-0130-825857931
    • (2015) BMC Biol , vol.13 , pp. 19
    • Guo, B.1    DeFaveri, J.2    Sotelo, G.3    Nair, A.4    Merila, J.5
  • 133
    • 0026565123 scopus 로고
    • Ecological character displacement and speciation in sticklebacks
    • 19426066, ().:–.
    • Schluter D, McPhail JD, (1992) Ecological character displacement and speciation in sticklebacks. Am Nat140: 85–108. doi: 10.1086/28540419426066
    • (1992) Am Nat , vol.140 , pp. 85-108
    • Schluter, D.1    McPhail, J.D.2
  • 134
    • 0033955524 scopus 로고    scopus 로고
    • Natural selection and parallel speciation in sympatric sticklebacks
    • 10634785, ().:–.
    • Rundle HD, Nagel L, Wenrick Boughman J, Schluter D, (2000) Natural selection and parallel speciation in sympatric sticklebacks. Science287: 306–308. 10634785
    • (2000) Science , vol.287 , pp. 306-308
    • Rundle, H.D.1    Nagel, L.2    Wenrick, B.J.3    Schluter, D.4
  • 135
    • 0035927744 scopus 로고    scopus 로고
    • Divergent sexual selection enhances reproductive isolation in sticklebacks
    • 11418857, ().:–.
    • Boughman JW, (2001) Divergent sexual selection enhances reproductive isolation in sticklebacks. Nature411: 944–948. 11418857
    • (2001) Nature , vol.411 , pp. 944-948
    • Boughman, J.W.1
  • 136
    • 0000689932 scopus 로고
    • Glacial Refugia, Endemism, and Stickleback Populations of Queen Charlotte Islands, British-Columbia
    • ().:–.
    • Moodie GEE, Reimchen TE, (1976) Glacial Refugia, Endemism, and Stickleback Populations of Queen Charlotte Islands, British-Columbia. Canadian Field-Naturalist90: 471–474.
    • (1976) Canadian Field-Naturalist , vol.90 , pp. 471-474
    • Moodie, G.E.E.1    Reimchen, T.E.2
  • 137
    • 0000192554 scopus 로고
    • Mitochondrial-DNA in Gasterosteus and Pleistocene Glacial Refugium on the Queen-Charlotte-Islands, British-Columbia
    • ().:–.
    • Oreilly P, Reimchen TE, Beech R, Strobeck C, (1993) Mitochondrial-DNA in Gasterosteus and Pleistocene Glacial Refugium on the Queen-Charlotte-Islands, British-Columbia. Evolution47: 678–684.
    • (1993) Evolution , vol.47 , pp. 678-684
    • Oreilly, P.1    Reimchen, T.E.2    Beech, R.3    Strobeck, C.4
  • 138
    • 84875364944 scopus 로고    scopus 로고
    • Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping
    • 23452150, ().:–.
    • Deagle BE, Jones FC, Absher DM, Kingsley DM, Reimchen TE, (2013) Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping. Molecular Ecology22: 1917–1932. doi: 10.1111/mec.1221523452150
    • (2013) Molecular Ecology , vol.22 , pp. 1917-1932
    • Deagle, B.E.1    Jones, F.C.2    Absher, D.M.3    Kingsley, D.M.4    Reimchen, T.E.5
  • 139
    • 84855708550 scopus 로고    scopus 로고
    • A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks
    • 22197244, . ().:–.
    • Jones FC, Chan YF, Schmutz J, Grimwood J, Brady SD, et al. (2012) A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks. Current Biology22: 83–90. doi: 10.1016/j.cub.2011.11.04522197244
    • (2012) Current Biology , vol.22 , pp. 83-90
    • Jones, F.C.1    Chan, Y.F.2    Schmutz, J.3    Grimwood, J.4    Brady, S.D.5
  • 140
    • 70450248380 scopus 로고    scopus 로고
    • Parallels, nonparallels, and plasticity in population differentiation of threespine stickleback within a lake
    • ().:–.
    • Olafsdottir GA, Snorrason SS, (2009) Parallels, nonparallels, and plasticity in population differentiation of threespine stickleback within a lake. Biol J Linn Soc98: 803–813.
    • (2009) Biol J Linn Soc , vol.98 , pp. 803-813
    • Olafsdottir, G.A.1    Snorrason, S.S.2
  • 141
    • 84875364944 scopus 로고    scopus 로고
    • Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping
    • 23452150, ().:–.
    • Deagle BE, Jones FC, Absher DM, Kingsley DM, Reimchen TE, (2013) Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping. Mol Ecol22: 1917–1932. doi: 10.1111/mec.1221523452150
    • (2013) Mol Ecol , vol.22 , pp. 1917-1932
    • Deagle, B.E.1    Jones, F.C.2    Absher, D.M.3    Kingsley, D.M.4    Reimchen, T.E.5
  • 142
    • 84906942500 scopus 로고    scopus 로고
    • Quick divergence but slow convergence during ecotype formation in lake and stream stickleback pairs of variable age
    • 24976108, ().:–.
    • Lucek K, Sivasundar A, Kristjansson BK, Skulason S, Seehausen O, (2014) Quick divergence but slow convergence during ecotype formation in lake and stream stickleback pairs of variable age. J Evol Biol27: 1878–1892. doi: 10.1111/jeb.1243924976108
    • (2014) J Evol Biol , vol.27 , pp. 1878-1892
    • Lucek, K.1    Sivasundar, A.2    Kristjansson, B.K.3    Skulason, S.4    Seehausen, O.5
  • 143
    • 0002813649 scopus 로고
    • Phenetic Variation and Habitat Differences in Gasterosteus Populations of Queen Charlotte Islands
    • ().:–.
    • Moodie GEE, Reimchen TE, (1976) Phenetic Variation and Habitat Differences in Gasterosteus Populations of Queen Charlotte Islands. Syst Zool25: 49–61.
    • (1976) Syst Zool , vol.25 , pp. 49-61
    • Moodie, G.E.E.1    Reimchen, T.E.2
  • 144
    • 0000942989 scopus 로고
    • Multivariate Differentiation of Parapatric and Allopatric Populations of Threespine Stickleback in the Sangan River Watershed, Queen-Charlotte-Islands
    • ().:–.
    • Reimchen TE, Stinson EM, Nelson JS, (1985) Multivariate Differentiation of Parapatric and Allopatric Populations of Threespine Stickleback in the Sangan River Watershed, Queen-Charlotte-Islands. Can J Zool63: 2944–2951.
    • (1985) Can J Zool , vol.63 , pp. 2944-2951
    • Reimchen, T.E.1    Stinson, E.M.2    Nelson, J.S.3
  • 145
    • 84879618489 scopus 로고    scopus 로고
    • Natural selection and the adaptive radiation of Haida Gwaii stickleback
    • ().:–.
    • Reimchen TE, Bergstrom C, Nosil P, (2013) Natural selection and the adaptive radiation of Haida Gwaii stickleback. Evol Ecol Res15: 241–269.
    • (2013) Evol Ecol Res , vol.15 , pp. 241-269
    • Reimchen, T.E.1    Bergstrom, C.2    Nosil, P.3
  • 146
    • 84869116803 scopus 로고    scopus 로고
    • The probability of genetic parallelism and convergence in natural populations
    • 23075840, ().:–.
    • Conte GL, Arnegard ME, Peichel CL, Schluter D, (2012) The probability of genetic parallelism and convergence in natural populations. Proc Biol Sci279: 5039–5047. doi: 10.1098/rspb.2012.214623075840
    • (2012) Proc Biol Sci , vol.279 , pp. 5039-5047
    • Conte, G.L.1    Arnegard, M.E.2    Peichel, C.L.3    Schluter, D.4
  • 147
    • 68249097999 scopus 로고    scopus 로고
    • Phenotype-dependent native habitat preference facilitates divergence between parapatric lake and stream stickleback
    • 19473386, . ().:–.
    • Bolnick DI, Snowberg LK, Patenia C, Stutz WE, Ingram T, et al. (2009) Phenotype-dependent native habitat preference facilitates divergence between parapatric lake and stream stickleback. Evolution63: 2004–2016. doi: 10.1111/j.1558-5646.2009.00699.x19473386
    • (2009) Evolution , vol.63 , pp. 2004-2016
    • Bolnick, D.I.1    Snowberg, L.K.2    Patenia, C.3    Stutz, W.E.4    Ingram, T.5
  • 148
    • 67650281518 scopus 로고    scopus 로고
    • Genetics and ecological speciation
    • 19528639, ().:–.
    • Schluter D, Conte GL, (2009) Genetics and ecological speciation. Proc Natl Acad Sci U S A106Suppl 1: 9955–9962. doi: 10.1073/pnas.090126410619528639
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 9955-9962
    • Schluter, D.1    Conte, G.L.2
  • 149
    • 84863205849 scopus 로고    scopus 로고
    • NIH Image to ImageJ: 25 years of image analysis
    • 22930834, ().:–.
    • Schneider CA, Rasband WS, Eliceiri KW, (2012) NIH Image to ImageJ: 25 years of image analysis. Nat Methods9: 671–675. 22930834
    • (2012) Nat Methods , vol.9 , pp. 671-675
    • Schneider, C.A.1    Rasband, W.S.2    Eliceiri, K.W.3
  • 150
    • 84863956368 scopus 로고    scopus 로고
    • When phenotypes do not match genotypes—unexpected phenotypic diversity and potential environmental constraints in Icelandic stickleback
    • 22563124, ().:–.
    • Lucek K, Haesler MP, Sivasundar A, (2012) When phenotypes do not match genotypes—unexpected phenotypic diversity and potential environmental constraints in Icelandic stickleback. J Hered103: 579–584. doi: 10.1093/jhered/ess02122563124
    • (2012) J Hered , vol.103 , pp. 579-584
    • Lucek, K.1    Haesler, M.P.2    Sivasundar, A.3
  • 151
    • 54449098752 scopus 로고    scopus 로고
    • Rapid SNP discovery and genetic mapping using sequenced RAD markers
    • 18852878, . ().:.
    • Baird NA, Etter PD, Atwood TS, Currey MC, Shiver AL, et al. (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One3: e3376. doi: 10.1371/journal.pone.000337618852878
    • (2008) PLoS One , vol.3 , pp. e3376
    • Baird, N.A.1    Etter, P.D.2    Atwood, T.S.3    Currey, M.C.4    Shiver, A.L.5
  • 152
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • 22388286, ().:–.
    • Langmead B, Salzberg SL, (2012) Fast gapped-read alignment with Bowtie 2. Nat Methods9: 357–359. doi: 10.1038/nmeth.192322388286
    • (2012) Nat Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 153
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • 19505943, . ().:–.
    • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics25: 2078–2079. doi: 10.1093/bioinformatics/btp35219505943
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3    Fennell, T.4    Ruan, J.5
  • 154
    • 0017367852 scopus 로고
    • Nucleotide sequence of bacteriophage phi X174 DNA
    • 870828, . ().:–.
    • Sanger F, Air GM, Barrell BG, Brown NL, Coulson AR, et al. (1977) Nucleotide sequence of bacteriophage phi X174 DNA. Nature265: 687–695. 870828
    • (1977) Nature , vol.265 , pp. 687-695
    • Sanger, F.1    Air, G.M.2    Barrell, B.G.3    Brown, N.L.4    Coulson, A.R.5
  • 155
    • 77956295988 scopus 로고    scopus 로고
    • The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data
    • 20644199, . ().:–.
    • McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, et al. (2010) The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res20: 1297–1303. doi: 10.1101/gr.107524.11020644199
    • (2010) Genome Res , vol.20 , pp. 1297-1303
    • McKenna, A.1    Hanna, M.2    Banks, E.3    Sivachenko, A.4    Cibulskis, K.5
  • 156
    • 79960405019 scopus 로고    scopus 로고
    • The variant call format and VCFtools
    • 21653522, . ().:–.
    • Danecek P, Auton A, Abecasis G, Albers CA, Banks E, et al. (2011) The variant call format and VCFtools. Bioinformatics27: 2156–2158. doi: 10.1093/bioinformatics/btr33021653522
    • (2011) Bioinformatics , vol.27 , pp. 2156-2158
    • Danecek, P.1    Auton, A.2    Abecasis, G.3    Albers, C.A.4    Banks, E.5
  • 157
    • 79955609628 scopus 로고    scopus 로고
    • Linkage Mapping and Comparative Genomics Using Next-Generation RAD Sequencing of a Non-Model Organism
    • . ().
    • Baxter SW, Davey JW, Johnston JS, Shelton AM, Heckel DG, et al. (2011) Linkage Mapping and Comparative Genomics Using Next-Generation RAD Sequencing of a Non-Model Organism. Plos One6.
    • (2011) Plos One , vol.6
    • Baxter, S.W.1    Davey, J.W.2    Johnston, J.S.3    Shelton, A.M.4    Heckel, D.G.5
  • 158
    • 79959435199 scopus 로고    scopus 로고
    • Genome-wide genetic marker discovery and genotyping using next-generation sequencing
    • 21681211, . ().:–.
    • Davey JW, Hohenlohe PA, Etter PD, Boone JQ, Catchen JM, et al. (2011) Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Nature Reviews Genetics12: 499–510. doi: 10.1038/nrg301221681211
    • (2011) Nature Reviews Genetics , vol.12 , pp. 499-510
    • Davey, J.W.1    Hohenlohe, P.A.2    Etter, P.D.3    Boone, J.Q.4    Catchen, J.M.5
  • 159
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
    • 21565059, ().:–.
    • Excoffier L, Lischer HE, (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour10: 564–567. doi: 10.1111/j.1755-0998.2010.02847.x21565059
    • (2010) Mol Ecol Resour , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.2
  • 160
    • 84856088655 scopus 로고    scopus 로고
    • PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs
    • 22110245, ().:–.
    • Lischer HE, Excoffier L, (2012) PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs. Bioinformatics28: 298–299. doi: 10.1093/bioinformatics/btr64222110245
    • (2012) Bioinformatics , vol.28 , pp. 298-299
    • Lischer, H.E.1    Excoffier, L.2
  • 161
    • 80054949793 scopus 로고    scopus 로고
    • adegenet 1.3–1: new tools for the analysis of genome-wide SNP data
    • 21926124, ().:–.
    • Jombart T, Ahmed I, (2011) adegenet 1.3–1: new tools for the analysis of genome-wide SNP data. Bioinformatics27: 3070–3071. doi: 10.1093/bioinformatics/btr52121926124
    • (2011) Bioinformatics , vol.27 , pp. 3070-3071
    • Jombart, T.1    Ahmed, I.2
  • 162
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • 10835412, ().:–.
    • Pritchard JK, Stephens M, Donnelly P, (2000) Inference of population structure using multilocus genotype data. Genetics155: 945–959. 10835412
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 163
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • 12930761, ().:–.
    • Falush D, Stephens M, Pritchard JK, (2003) Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies. Genetics164: 1567–1587. 12930761
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 164
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
    • 15969739, ().:–.
    • Evanno G, Regnaut S, Goudet J, (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol14: 2611–2620. 15969739
    • (2005) Mol Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 165
    • 70349506039 scopus 로고    scopus 로고
    • Detecting loci under selection in a hierarchically structured population
    • 19623208, ().:–.
    • Excoffier L, Hofer T, Foll M, (2009) Detecting loci under selection in a hierarchically structured population. Heredity103: 285–298. doi: 10.1038/hdy.2009.7419623208
    • (2009) Heredity , vol.103 , pp. 285-298
    • Excoffier, L.1    Hofer, T.2    Foll, M.3
  • 166
    • 84862564389 scopus 로고    scopus 로고
    • Uninformative polymorphisms bias genome scans for signatures of selection
    • 22726891, ().:.
    • Roesti M, Salzburger W, Berner D, (2012) Uninformative polymorphisms bias genome scans for signatures of selection. BMC Evol Biol12: 94. doi: 10.1186/1471-2148-12-9422726891
    • (2012) BMC Evol Biol , vol.12 , pp. 94
    • Roesti, M.1    Salzburger, W.2    Berner, D.3
  • 167
    • 34548292504 scopus 로고    scopus 로고
    • PLINK: a tool set for whole-genome association and population-based linkage analyses
    • 17701901, . ().:–.
    • Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MA, et al. (2007) PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet81: 559–575. 17701901
    • (2007) Am J Hum Genet , vol.81 , pp. 559-575
    • Purcell, S.1    Neale, B.2    Todd-Brown, K.3    Thomas, L.4    Ferreira, M.A.5
  • 168
    • 0035865094 scopus 로고    scopus 로고
    • Comparison of human genetic and sequence-based physical maps
    • 11237020, . ().:–.
    • Yu A, Zhao C, Fan Y, Jang W, Mungall AJ, et al. (2001) Comparison of human genetic and sequence-based physical maps. Nature409: 951–953. 11237020
    • (2001) Nature , vol.409 , pp. 951-953
    • Yu, A.1    Zhao, C.2    Fan, Y.3    Jang, W.4    Mungall, A.J.5
  • 170
    • 84876515907 scopus 로고    scopus 로고
    • STRING v9.1: protein-protein interaction networks, with increased coverage and integration
    • 23203871, . ().:–.
    • Franceschini A, Szklarczyk D, Frankild S, Kuhn M, Simonovic M, et al. (2013) STRING v9.1: protein-protein interaction networks, with increased coverage and integration. Nucleic Acids Res41: D808–815. doi: 10.1093/nar/gks109423203871
    • (2013) Nucleic Acids Res , vol.41 , pp. D808-815
    • Franceschini, A.1    Szklarczyk, D.2    Frankild, S.3    Kuhn, M.4    Simonovic, M.5
  • 171
    • 84959926025 scopus 로고    scopus 로고
    • ().:.
    • R Development Core Team (2013) R: A language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical Computing.
    • (2013)


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