The variant call format and VCFtools

Bioinformatics

Volumn 27, Issue 15, 2011, Pages 2156-2158

  Danecek, Petr ^a   Auton, Adam ^b   Abecasis, Goncalo ^c   Albers, Cornelis A ^a   Banks, Eric ^d   DePristo, Mark A ^d   Handsaker, Robert E ^d   Lunter, Gerton ^b   Marth, Gabor T ^e   Sherry, Stephen T ^f   McVean, Gilean ^b,g   Durbin, Richard ^a  

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^b UNIVERSITY OF OXFORD   (United Kingdom)

^c UNIVERSITY OF MICHIGAN   (United States)

^d BROAD INSTITUTE OF MIT AND HARVARD   (United States)

^e BOSTON COLLEGE   (United States)

^f NATIONAL INSTITUTES OF HEALTH   (United States)

^g UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; COMPUTER PROGRAM; GENETIC VARIABILITY; GENOMICS; GENOTYPE; HUMAN; HUMAN GENOME; INFORMATION RETRIEVAL; METHODOLOGY;

ALLELES; GENETIC VARIATION; GENOME, HUMAN; GENOMICS; GENOTYPE; HUMANS; INFORMATION STORAGE AND RETRIEVAL; SOFTWARE;

EID: 79960405019     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr330     Document Type: Article

References (4)

1. Durbin,R.M. et al. (2010) A map of human genome variation from population-scale sequencing. Nature, 467, 1061-1073.
2. Li,H. et al. (2009) The sequence alignment/map format and SAMtools. Bioinformatics, 25, 2078-2079.
3. McKenna,A.H. et al. (2010) The genome analysis toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res., 20, 1297-1303.
4. Reese,M.G. et al. (2010)Astandard variation file format for human genome sequences. Genome Biol., 11, 20796305.