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Volumn 6, Issue , 2015, Pages

Whole-genome sequencing reveals activation-induced cytidine deaminase signatures during indolent chronic lymphocytic leukaemia evolution

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATION INDUCED CYTIDINE DEAMINASE; IMMUNOGLOBULIN; AICDA (ACTIVATION-INDUCED CYTIDINE DEAMINASE); CYTIDINE DEAMINASE;

EID: 84949518098     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms9866     Document Type: Article
Times cited : (200)

References (67)
  • 1
    • 45149100665 scopus 로고    scopus 로고
    • Guidelines for the diagnosis and treatment of chronic lymphocytic leukemia: A report from the International Workshop on Chronic Lymphocytic Leukemia updating the National Cancer Institute-Working Group 1996 guidelines
    • Hallek, M. et al. Guidelines for the diagnosis and treatment of chronic lymphocytic leukemia: a report from the International Workshop on Chronic Lymphocytic Leukemia updating the National Cancer Institute-Working Group 1996 guidelines. Blood 111, 5446-5456 (2008
    • (2008) Blood , vol.111 , pp. 5446-5456
    • Hallek, M.1
  • 2
    • 0034727833 scopus 로고    scopus 로고
    • Genomic aberrations and survival in chronic lymphocytic leukemia
    • Dohner, H. et al. Genomic aberrations and survival in chronic lymphocytic leukemia. N. Engl. J. Med. 343, 1910-1916 (2000
    • (2000) N. Engl. J. Med , vol.343 , pp. 1910-1916
    • Dohner, H.1
  • 3
    • 79960036578 scopus 로고    scopus 로고
    • Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia
    • Puente, X. S. et al. Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia. Nature 475, 101-105 (2011
    • (2011) Nature , vol.475 , pp. 101-105
    • Puente, X.S.1
  • 4
    • 84882837534 scopus 로고    scopus 로고
    • Signatures of mutational processes in human cancer
    • Alexandrov, L. B. et al. Signatures of mutational processes in human cancer. Nature 500, 415-421 (2013
    • (2013) Nature , vol.500 , pp. 415-421
    • Alexandrov, L.B.1
  • 5
    • 84878158173 scopus 로고    scopus 로고
    • Automatic relevance determination in nonnegative matrix factorization with the beta-divergence
    • IEEE Trans
    • Tan, V. Y. & Fevotte, C. Automatic relevance determination in nonnegative matrix factorization with the beta-divergence. IEEE Trans. Pattern Anal. Mach. Intell. 35, 1592-1605 (2013
    • (2013) Pattern Anal. Mach. Intell , vol.35 , pp. 1592-1605
    • Tan, V.Y.1    Fevotte, C.2
  • 6
    • 84861541343 scopus 로고    scopus 로고
    • Mutational processes molding the genomes of 21 breast cancers
    • Nik-Zainal, S. et al. Mutational processes molding the genomes of 21 breast cancers. Cell 149, 979-993 (2012
    • (2012) Cell , vol.149 , pp. 979-993
    • Nik-Zainal, S.1
  • 7
    • 84880507665 scopus 로고    scopus 로고
    • Mutational heterogeneity in cancer and the search for new cancer-Associated genes
    • Lawrence, M. S. et al. Mutational heterogeneity in cancer and the search for new cancer-Associated genes. Nature 499, 214-218 (2013
    • (2013) Nature , vol.499 , pp. 214-218
    • Lawrence, M.S.1
  • 8
    • 84918779420 scopus 로고    scopus 로고
    • AID expression in B-cell lymphomas causes accumulation of genomic uracil and a distinct AID mutational signature
    • Pettersen, H. S. et al. AID expression in B-cell lymphomas causes accumulation of genomic uracil and a distinct AID mutational signature. DNA Repair (Amst) 25, 60-71 (2015
    • (2015) DNA Repair (Amst) , vol.25 , pp. 60-71
    • Pettersen, H.S.1
  • 9
    • 84870757659 scopus 로고    scopus 로고
    • IGHV-unmutated and IGHV-mutated chronic lymphocytic leukemia cells produce activation-induced deaminase protein with a full range of biologic functions
    • Patten, P. E. et al. IGHV-unmutated and IGHV-mutated chronic lymphocytic leukemia cells produce activation-induced deaminase protein with a full range of biologic functions. Blood 120, 4802-4811 (2012
    • (2012) Blood , vol.120 , pp. 4802-4811
    • Patten, P.E.1
  • 10
    • 84861460657 scopus 로고    scopus 로고
    • Clustered mutations in yeast and in human cancers can arise from damaged long single-strand DNA regions
    • Roberts, S. A. et al. Clustered mutations in yeast and in human cancers can arise from damaged long single-strand DNA regions. Mol. Cell 46, 424-435 (2012
    • (2012) Mol. Cell , vol.46 , pp. 424-435
    • Roberts, S.A.1
  • 11
    • 0035913362 scopus 로고    scopus 로고
    • Hypermutation of multiple proto-oncogenes in B-cell diffuse large-cell lymphomas
    • Pasqualucci, L. et al. Hypermutation of multiple proto-oncogenes in B-cell diffuse large-cell lymphomas. Nature 412, 341-346 (2001
    • (2001) Nature , vol.412 , pp. 341-346
    • Pasqualucci, L.1
  • 12
    • 84873390533 scopus 로고    scopus 로고
    • Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability
    • Drier, Y. et al. Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability. Genome Res. 23, 228-235 (2013
    • (2013) Genome Res , vol.23 , pp. 228-235
    • Drier, Y.1
  • 13
    • 84865766187 scopus 로고    scopus 로고
    • Independent coexistence of clones with 13q14 deletion at reciprocal translocation breakpoint and 13q14 interstitial deletion in chronic lymphocytic leukemia
    • Hruba, M., Dvorak, P., Weberova, L. & Subrt, I. Independent coexistence of clones with 13q14 deletion at reciprocal translocation breakpoint and 13q14 interstitial deletion in chronic lymphocytic leukemia. Leuk. Lymphoma 53, 2054-2062 (2012
    • (2012) Leuk. Lymphoma , vol.53 , pp. 2054-2062
    • Hruba, M.1    Dvorak, P.2    Weberova, L.3    Subrt, I.4
  • 14
    • 77956837711 scopus 로고    scopus 로고
    • Biological and clinical characterization of recurrent 14q deletions in CLL and other mature B-cell neoplasms
    • Reindl, L. et al. Biological and clinical characterization of recurrent 14q deletions in CLL and other mature B-cell neoplasms. Br. J. Haematol. 151, 25-36 (2010
    • (2010) Br. J. Haematol , vol.151 , pp. 25-36
    • Reindl, L.1
  • 15
    • 61349159400 scopus 로고    scopus 로고
    • Frequency of 5?IGH deletions in B-cell chronic lymphocytic leukemia
    • Quintero-Rivera, F., Nooraie, F. & Rao, P. N. Frequency of 5?IGH deletions in B-cell chronic lymphocytic leukemia. Cancer Genet. Cytogenet. 190, 33-39 (2009
    • (2009) Cancer Genet. Cytogenet , vol.190 , pp. 33-39
    • Quintero-Rivera, F.1    Nooraie, F.2    Rao, P.N.3
  • 16
    • 84863957729 scopus 로고    scopus 로고
    • Integrative genomic analysis implicates gain of PIK3CA at 3q26 and MYC at 8q24 in chronic lymphocytic leukemia
    • Brown, J. R. et al. Integrative genomic analysis implicates gain of PIK3CA at 3q26 and MYC at 8q24 in chronic lymphocytic leukemia. Clin. Cancer Res. 18, 3791-3802 (2012
    • (2012) Clin. Cancer Res , vol.18 , pp. 3791-3802
    • Brown, J.R.1
  • 17
    • 33846883741 scopus 로고    scopus 로고
    • Genome-wide analysis of DNA copy number changes and LOH in CLL using high-density SNP arrays
    • Pfeifer, D. et al. Genome-wide analysis of DNA copy number changes and LOH in CLL using high-density SNP arrays. Blood 109, 1202-1210 (2007
    • (2007) Blood , vol.109 , pp. 1202-1210
    • Pfeifer, D.1
  • 18
    • 78650959663 scopus 로고    scopus 로고
    • Massive genomic rearrangement acquired in a single catastrophic event during cancer development
    • Stephens, P. J. et al. Massive genomic rearrangement acquired in a single catastrophic event during cancer development. Cell 144, 27-40 (2011
    • (2011) Cell , vol.144 , pp. 27-40
    • Stephens, P.J.1
  • 19
    • 84875757638 scopus 로고    scopus 로고
    • Punctuated evolution of prostate cancer genomes
    • Baca, S. C. et al. Punctuated evolution of prostate cancer genomes. Cell 153, 666-677 (2013
    • (2013) Cell , vol.153 , pp. 666-677
    • Baca, S.C.1
  • 20
    • 84875135862 scopus 로고    scopus 로고
    • Criteria for inference of chromothripsis in cancer genomes
    • Korbel, J. O. & Campbell, P. J. Criteria for inference of chromothripsis in cancer genomes. Cell 152, 1226-1236 (2013
    • (2013) Cell , vol.152 , pp. 1226-1236
    • Korbel, J.O.1    Campbell, P.J.2
  • 21
    • 84930941966 scopus 로고    scopus 로고
    • Chromothripsis from DNA damage in micronuclei
    • Zhang, C.-Z. et al. Chromothripsis from DNA damage in micronuclei. Nature 522, 179-184 (2015
    • (2015) Nature , vol.522 , pp. 179-184
    • Zhang, C.-Z.1
  • 22
    • 84886290682 scopus 로고    scopus 로고
    • Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing
    • Morin, R. D. et al. Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing. Blood 122, 1256-1265 (2013
    • (2013) Blood , vol.122 , pp. 1256-1265
    • Morin, R.D.1
  • 23
    • 79951494668 scopus 로고    scopus 로고
    • Initial genome sequencing and analysis of multiple myeloma
    • Chapman, M. A. et al. Initial genome sequencing and analysis of multiple myeloma. Nature 471, 467-472 (2011
    • (2011) Nature , vol.471 , pp. 467-472
    • Chapman, M.A.1
  • 24
    • 84874102335 scopus 로고    scopus 로고
    • Evolution and impact of subclonal mutations in chronic lymphocytic leukemia
    • Landau, D. A. et al. Evolution and impact of subclonal mutations in chronic lymphocytic leukemia. Cell 152, 714-726 (2013
    • (2013) Cell , vol.152 , pp. 714-726
    • Landau, D.A.1
  • 25
    • 84892833777 scopus 로고    scopus 로고
    • Discovery and saturation analysis of cancer genes across 21 tumour types
    • Lawrence, M. S. et al. Discovery and saturation analysis of cancer genes across 21 tumour types. Nature 505, 495-501 (2014
    • (2014) Nature , vol.505 , pp. 495-501
    • Lawrence, M.S.1
  • 26
    • 84908125471 scopus 로고    scopus 로고
    • Exome sequencing reveals novel mutation targets in diffuse large B-cell lymphomas derived from Chinese patients
    • De Miranda, N. F. et al. Exome sequencing reveals novel mutation targets in diffuse large B-cell lymphomas derived from Chinese patients. Blood 124, 2544-2553 (2014
    • (2014) Blood , vol.124 , pp. 2544-2553
    • De Miranda, N.F.1
  • 28
    • 84925497848 scopus 로고    scopus 로고
    • Hypermutation in human cancer genomes: Footprints and mechanisms
    • Roberts, S. A. & Gordenin, D. A. Hypermutation in human cancer genomes: footprints and mechanisms. Nat. Rev. Cancer 14, 786-800 (2014
    • (2014) Nat. Rev. Cancer , vol.14 , pp. 786-800
    • Roberts, S.A.1    Gordenin, D.A.2
  • 30
    • 78650308767 scopus 로고    scopus 로고
    • Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes
    • Yamane, A. et al. Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes. Nat. Immunol. 12, 62-69 (2011
    • (2011) Nat. Immunol , vol.12 , pp. 62-69
    • Yamane, A.1
  • 31
    • 34249790004 scopus 로고    scopus 로고
    • Molecular mechanisms of antibody somatic hypermutation
    • Di Noia, J. M. & Neuberger, M. S. Molecular mechanisms of antibody somatic hypermutation. Annu. Rev. Biochem. 76, 1-22 (2007
    • (2007) Annu. Rev. Biochem , vol.76 , pp. 1-22
    • Di Noia, J.M.1    Neuberger, M.S.2
  • 32
    • 0027499308 scopus 로고
    • Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: Clustering, polarity, and specific hot spots
    • Betz, A. G., Rada, C., Pannell, R., Milstein, C. & Neuberger, M. S. Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: clustering, polarity, and specific hot spots. Proc. Natl Acad. Sci. USA 90, 2385-2388 (1993
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 2385-2388
    • Betz, A.G.1    Rada, C.2    Pannell, R.3    Milstein, C.4    Neuberger, M.S.5
  • 33
    • 79955632686 scopus 로고    scopus 로고
    • Complex regulation and function of activation-induced cytidine deaminase
    • Stavnezer, J. Complex regulation and function of activation-induced cytidine deaminase. Trends Immunol. 32, 194-201 (2011
    • (2011) Trends Immunol , vol.32 , pp. 194-201
    • Stavnezer, J.1
  • 34
    • 58249095957 scopus 로고    scopus 로고
    • Transcriptional pausing and stalling causes multiple clustered mutations by human activation-induced deaminase
    • Canugovi, C., Samaranayake, M. & Bhagwat, A. S. Transcriptional pausing and stalling causes multiple clustered mutations by human activation-induced deaminase. FASEB J. 23, 34-44 (2009
    • (2009) FASEB J. , vol.23 , pp. 34-44
    • Canugovi, C.1    Samaranayake, M.2    Bhagwat, A.S.3
  • 35
    • 0142245596 scopus 로고    scopus 로고
    • Activation-induced cytidine deaminase in chronic lymphocytic leukemia B cells: Expression as multiple forms in a dynamic, variably sized fraction of the clone
    • Albesiano, E. et al. Activation-induced cytidine deaminase in chronic lymphocytic leukemia B cells: expression as multiple forms in a dynamic, variably sized fraction of the clone. Blood 102, 3333-3339 (2003
    • (2003) Blood , vol.102 , pp. 3333-3339
    • Albesiano, E.1
  • 36
    • 84949523478 scopus 로고    scopus 로고
    • Next-generation sequencing reveals clonal evolution at the immunoglobulin loci in chronic lymphocytic leukemia
    • Brown, J. R. et al. Next-generation sequencing reveals clonal evolution at the immunoglobulin loci in chronic lymphocytic leukemia. Blood 124, 3302 (2014
    • (2014) Blood , vol.124 , pp. 3302
    • Brown, J.R.1
  • 37
    • 1942521277 scopus 로고    scopus 로고
    • The pattern and distribution of immunoglobulin VH gene mutations in chronic lymphocytic leukemia B cells are consistent with the canonical somatic hypermutation process
    • Messmer, B. T., Albesiano, E., Messmer, D. & Chiorazzi, N. The pattern and distribution of immunoglobulin VH gene mutations in chronic lymphocytic leukemia B cells are consistent with the canonical somatic hypermutation process. Blood 103, 3490-3495 (2004
    • (2004) Blood , vol.103 , pp. 3490-3495
    • Messmer, B.T.1    Albesiano, E.2    Messmer, D.3    Chiorazzi, N.4
  • 38
    • 84924302041 scopus 로고    scopus 로고
    • AID induces intraclonal diversity and genomic damage in CD86(+) chronic lymphocytic leukemia cells
    • Huemer, M. et al. AID induces intraclonal diversity and genomic damage in CD86(+) chronic lymphocytic leukemia cells. Eur. J. Immunol. 44, 3747-3757 (2014
    • (2014) Eur. J. Immunol , vol.44 , pp. 3747-3757
    • Huemer, M.1
  • 39
    • 12944255838 scopus 로고    scopus 로고
    • Distribution and pattern of BCL-6 mutations throughout the spectrum of B-cell neoplasia
    • Capello, D. et al. Distribution and pattern of BCL-6 mutations throughout the spectrum of B-cell neoplasia. Blood 95, 651-659 (2000
    • (2000) Blood , vol.95 , pp. 651-659
    • Capello, D.1
  • 40
    • 84872779378 scopus 로고    scopus 로고
    • Recurrent targets of aberrant somatic hypermutation in lymphoma
    • Khodabakhshi, A. H. et al. Recurrent targets of aberrant somatic hypermutation in lymphoma. Oncotarget 3, 1308-1319 (2012
    • (2012) Oncotarget , vol.3 , pp. 1308-1319
    • Khodabakhshi, A.H.1
  • 41
    • 84886411252 scopus 로고    scopus 로고
    • Cancer gene discovery: Exploiting insertional mutagenesis
    • Ranzani, M., Annunziato, S., Adams, D. J. & Montini, E. Cancer gene discovery: exploiting insertional mutagenesis. Mol. Cancer Res. 11, 1141-1158 (2013
    • (2013) Mol. Cancer Res , vol.11 , pp. 1141-1158
    • Ranzani, M.1    Annunziato, S.2    Adams, D.J.3    Montini, E.4
  • 42
    • 84878983840 scopus 로고    scopus 로고
    • Aberrant methylation and loss of CADM2 tumor suppressor expression is associated with human renal cell carcinoma tumor progression
    • He, W. et al. Aberrant methylation and loss of CADM2 tumor suppressor expression is associated with human renal cell carcinoma tumor progression. Biochem. Biophys. Res. Commun. 435, 526-532 (2013
    • (2013) Biochem. Biophys. Res. Commun , vol.435 , pp. 526-532
    • He, W.1
  • 43
    • 80052395865 scopus 로고    scopus 로고
    • Muscarinic receptor subtype-3 gene ablation and scopolamine butylbromidetreatment attenuate small intestinal neoplasia in apcmin/+ mice
    • Raufman, J.-P. et al. Muscarinic receptor subtype-3 gene ablation and scopolamine butylbromidetreatment attenuate small intestinal neoplasia in apcmin/+ mice. Carcinogenesis 32, 1396-1402 (2011
    • (2011) Carcinogenesis , vol.32 , pp. 1396-1402
    • Raufman, J.-P.1
  • 44
    • 77955660663 scopus 로고    scopus 로고
    • Diverse somatic mutation patterns and pathway alterations in human cancers
    • Kan, Z. et al. Diverse somatic mutation patterns and pathway alterations in human cancers. Nature 466, 869-873 (2010
    • (2010) Nature , vol.466 , pp. 869-873
    • Kan, Z.1
  • 45
    • 84866389516 scopus 로고    scopus 로고
    • Activation of Robo1 signaling of breast cancer cells by Slit2 from stromal fibroblast restrains tumorigenesis via blocking PI3K/Akt/betacatenin pathway
    • Chang, P. H. et al. Activation of Robo1 signaling of breast cancer cells by Slit2 from stromal fibroblast restrains tumorigenesis via blocking PI3K/Akt/betacatenin pathway. Cancer Res. 72, 4652-4661 (2012
    • (2012) Cancer Res , vol.72 , pp. 4652-4661
    • Chang, P.H.1
  • 46
    • 84860782006 scopus 로고    scopus 로고
    • Absolute quantification of somatic DNA alterations in human cancer
    • Carter, S. L. et al. Absolute quantification of somatic DNA alterations in human cancer. Nat. Biotechnol. 30, 413-421 (2012
    • (2012) Nat. Biotechnol , vol.30 , pp. 413-421
    • Carter, S.L.1
  • 47
    • 84873692363 scopus 로고    scopus 로고
    • Regulation of Aicda expression and AID activity
    • Zan, H. & Casali, P. Regulation of Aicda expression and AID activity. Autoimmunity 46, 83-101 (2013
    • (2013) Autoimmunity , vol.46 , pp. 83-101
    • Zan, H.1    Casali, P.2
  • 48
    • 0038300728 scopus 로고    scopus 로고
    • Chronic lymphocytic leukemia B cells expressing AID display dissociation between class switch recombination and somatic hypermutation
    • Oppezzo, P. et al. Chronic lymphocytic leukemia B cells expressing AID display dissociation between class switch recombination and somatic hypermutation. Blood 101, 4029-4032 (2003
    • (2003) Blood , vol.101 , pp. 4029-4032
    • Oppezzo, P.1
  • 49
    • 4344594249 scopus 로고    scopus 로고
    • High expression of activation-induced cytidine deaminase (AID) mRNA is associated with unmutated IGVH gene status and unfavourable cytogenetic aberrations in patients with chronic lymphocytic leukaemia
    • Heintel, D. et al. High expression of activation-induced cytidine deaminase (AID) mRNA is associated with unmutated IGVH gene status and unfavourable cytogenetic aberrations in patients with chronic lymphocytic leukaemia. Leukemia 18, 756-762 (2004
    • (2004) Leukemia , vol.18 , pp. 756-762
    • Heintel, D.1
  • 50
    • 84856013431 scopus 로고    scopus 로고
    • Clonal evolution in cancer
    • Greaves, M. & Maley, C. C. Clonal evolution in cancer. Nature 481, 306-313 (2012
    • (2012) Nature , vol.481 , pp. 306-313
    • Greaves, M.1    Maley, C.C.2
  • 51
    • 84872287592 scopus 로고    scopus 로고
    • Regulation of AID, the B-cell genome mutator
    • Keim, C., Kazadi, D., Rothschild, G. & Basu, U. Regulation of AID, the B-cell genome mutator. Genes Dev. 27, 1-17 (2013
    • (2013) Genes Dev , vol.27 , pp. 1-17
    • Keim, C.1    Kazadi, D.2    Rothschild, G.3    Basu, U.4
  • 52
    • 0033603340 scopus 로고    scopus 로고
    • Specific expression of activation-induced cytidine deaminase (AID), a novel member of the RNA-editing deaminase family in germinal center B cells
    • Muramatsu, M. et al. Specific expression of activation-induced cytidine deaminase (AID), a novel member of the RNA-editing deaminase family in germinal center B cells. J. Biol. Chem. 274, 18470-18476 (1999
    • (1999) J. Biol. Chem , vol.274 , pp. 18470-18476
    • Muramatsu, M.1
  • 53
    • 84908310298 scopus 로고    scopus 로고
    • APOBEC3 signature mutations in chronic lymphocytic leukemia
    • Rebhandl, S. et al. APOBEC3 signature mutations in chronic lymphocytic leukemia. Leukemia 28, 1929-1932 (2014
    • (2014) Leukemia , vol.28 , pp. 1929-1932
    • Rebhandl, S.1
  • 54
    • 84867154468 scopus 로고    scopus 로고
    • Molecular pathogenesis of chronic lymphocytic leukemia
    • Gaidano, G., Foa, R. & Dalla-Favera, R. Molecular pathogenesis of chronic lymphocytic leukemia. J. Clin. Invest. 122, 3432-3438 (2012
    • (2012) J. Clin. Invest , vol.122 , pp. 3432-3438
    • Gaidano, G.1    Foa, R.2    Dalla-Favera, R.3
  • 56
    • 20044372326 scopus 로고    scopus 로고
    • In vivo measurements document the dynamic cellular kinetics of chronic lymphocytic leukemia B cells
    • Messmer, B. T. et al. In vivo measurements document the dynamic cellular kinetics of chronic lymphocytic leukemia B cells. J. Clin. Invest. 115, 755-764 (2005
    • (2005) J. Clin. Invest , vol.115 , pp. 755-764
    • Messmer, B.T.1
  • 57
    • 0035377269 scopus 로고    scopus 로고
    • DNA polymerase eta is an A-T mutator in somatic hypermutation of immunoglobulin variable genes
    • Zeng, X. et al. DNA polymerase eta is an A-T mutator in somatic hypermutation of immunoglobulin variable genes. Nat. Immunol. 2, 537-541 (2001
    • (2001) Nat. Immunol , vol.2 , pp. 537-541
    • Zeng, X.1
  • 58
    • 0034235906 scopus 로고    scopus 로고
    • Complementation of defective translesion synthesis and UV light sensitivity in xeroderma pigmentosum variant cells by human and mouse DNA polymerase eta
    • Yamada, A., Masutani, C., Iwai, S. & Hanaoka, F. Complementation of defective translesion synthesis and UV light sensitivity in xeroderma pigmentosum variant cells by human and mouse DNA polymerase eta. Nucleic Acids Res. 28, 2473-2480 (2000
    • (2000) Nucleic Acids Res , vol.28 , pp. 2473-2480
    • Yamada, A.1    Masutani, C.2    Iwai, S.3    Hanaoka, F.4
  • 59
    • 60049089790 scopus 로고    scopus 로고
    • Uracil in DNA and its processing by different DNA glycosylases
    • Visnes, T. et al. Uracil in DNA and its processing by different DNA glycosylases. Philos. Trans. R. Soc. Lond. B Biol. Sci. 364, 563-568 (2009
    • (2009) Philos. Trans. R. Soc. Lond. B Biol. Sci , vol.364 , pp. 563-568
    • Visnes, T.1
  • 60
    • 84865663785 scopus 로고    scopus 로고
    • Analysis of Ig gene hypermutation in Ung(-/-) Polh(-/-) mice suggests that UNG and A: T mutagenesis pathway target different U: G lesions
    • Li, S., Zhao, Y. & Wang, J. Y. Analysis of Ig gene hypermutation in Ung(-/-) Polh(-/-) mice suggests that UNG and A: T mutagenesis pathway target different U: G lesions. Mol. Immunol. 53, 214-217 (2013
    • (2013) Mol. Immunol , vol.53 , pp. 214-217
    • Li, S.1    Zhao, Y.2    Wang, J.Y.3
  • 61
    • 84863806091 scopus 로고    scopus 로고
    • Ectopic restriction of DNA repair reveals that UNG2 excises AID-induced uracils predominantly or exclusively during G1 phase
    • Sharbeen, G., Yee, C. W., Smith, A. L. & Jolly, C. J. Ectopic restriction of DNA repair reveals that UNG2 excises AID-induced uracils predominantly or exclusively during G1 phase. J. Exp. Med. 209, 965-974 (2012
    • (2012) J. Exp. Med , vol.209 , pp. 965-974
    • Sharbeen, G.1    Yee, C.W.2    Smith, A.L.3    Jolly, C.J.4
  • 62
    • 78650762588 scopus 로고    scopus 로고
    • A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries
    • Fisher, S. et al. A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries. Genome Biol. 12, R1 (2011
    • (2011) Genome Biol , vol.12 , pp. R1
    • Fisher, S.1
  • 63
    • 80052707308 scopus 로고    scopus 로고
    • ContEst: Estimating cross-contamination of human samples in next-generation sequencing data
    • Cibulskis, K. et al. ContEst: estimating cross-contamination of human samples in next-generation sequencing data. Bioinformatics 27, 2601-2602 (2011
    • (2011) Bioinformatics , vol.27 , pp. 2601-2602
    • Cibulskis, K.1
  • 64
    • 84874025843 scopus 로고    scopus 로고
    • Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
    • Cibulskis, K. et al. Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat. Biotechnol. 31, 213-219 (2013
    • (2013) Nat. Biotechnol , vol.31 , pp. 213-219
    • Cibulskis, K.1
  • 65
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • Trapnell, C., Pachter, L. & Salzberg, S. L. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25, 1105-1111 (2009
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 66
    • 84861743958 scopus 로고    scopus 로고
    • RNA-SeQC: RNA-seq metrics for quality control and process optimization
    • DeLuca, D. S. et al. RNA-SeQC: RNA-seq metrics for quality control and process optimization. Bioinformatics 28, 1530-1532 (2012
    • (2012) Bioinformatics , vol.28 , pp. 1530-1532
    • DeLuca, D.S.1
  • 67
    • 84859885816 scopus 로고    scopus 로고
    • Differential gene and transcript expression analysis of RNAseq experiments with TopHat and Cufflinks
    • Trapnell, C. et al. Differential gene and transcript expression analysis of RNAseq experiments with TopHat and Cufflinks. Nat. Protoc. 7, 562-578 (2012
    • (2012) Nat. Protoc , vol.7 , pp. 562-578
    • Trapnell, C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.