-
1
-
-
31044432090
-
XLF interacts with the XRCC4-DNA ligase IV complex to promote nonhomologous end-joining
-
Ahnesorg, P., Smith, P., and Jackson, S. P. (2006) XLF interacts with the XRCC4-DNA ligase IV complex to promote nonhomologous end-joining. Cell, 124, 301–313.
-
(2006)
Cell
, vol.124
, pp. 301-313
-
-
Ahnesorg, P.1
Smith, P.2
Jackson, S.P.3
-
2
-
-
0030420088
-
The DNA-Activated Protein Kinase-DNA-PK
-
In: Jessberger, R. and Lieber, M. R. (Eds.), Springer-Verlag, Heidelberg
-
Anderson, C. W. and Carter, T. H. (1996) The DNA-Activated Protein Kinase-DNA-PK. In: Jessberger, R. and Lieber, M. R. (Eds.) Molecular Analysis of DNA Rearrangements in the Immune System, Springer-Verlag, Heidelberg, pp. 91–112.
-
(1996)
Molecular Analysis of DNA Rearrangements in the Immune System
, pp. 91-112
-
-
Anderson, C.W.1
Carter, T.H.2
-
3
-
-
0141483284
-
The frameshift infidelity of human DNA polymerase lambda: Implications for function
-
Bebenek, B., Garcia-Diaz, M., Blanco, L., and Kunkel, T. A. (2003) The frameshift infidelity of human DNA polymerase lambda: implications for function. J Biol Chem, 278, 34685–34690.
-
(2003)
J Biol Chem
, vol.278
, pp. 3
-
-
Bebenek, B.1
Garcia-Diaz, M.2
Blanco, L.3
Kunkel, T.A.4
-
4
-
-
33745997776
-
Non-overlapping functions of polX family DNA polymerases, pol m, pol l, and Tdt, during immunoglobulin V(D)J recombination in vivo
-
Bertocci, B., Desmet, A., Weill, J.-C., and Reynaud, C. A. (2006) Non-overlapping functions of polX family DNA polymerases, pol m, pol l, and Tdt, during immunoglobulin V(D)J recombination in vivo. Immunity, 25, 31–41.
-
(2006)
Immunity
, vol.25
, pp. 31-41
-
-
Bertocci, B.1
Desmet, A.2
Weill, J.-C.3
Reynaud, C.A.4
-
5
-
-
0037388165
-
Activation-induced cytidine deaminase deaminates deoxycytidine on single-stranded DNA but requires the action of RNase
-
Bransteitter, R., Pham, P., Scharff, M. D., and Goodman, M. F. (2003) Activation-induced cytidine deaminase deaminates deoxycytidine on single-stranded DNA but requires the action of RNase. Proc Natl Acad Sci, 100, 4102–4107.
-
(2003)
Proc Natl Acad Sci
, vol.100
, pp. 4102-4107
-
-
Bransteitter, R.1
Pham, P.2
Scharff, M.D.3
Goodman, M.F.4
-
6
-
-
31044440630
-
Cernunnos, a novel nonhomologous end-joining factor, is mutated in human immunodeficiency with microcephaly
-
Buck, D., Malivert, L., Dechasseval, R., Barraud, A., Fondaneche, M.-C., Xanal, O., Plebani, A., Stephan, J.-L., Hufnagel, M., Lediest, F., Fischer, A., Durrandy, A., Villartay, J.-P. D., and Revy, P. (2006) Cernunnos, a novel nonhomologous end-joining factor, is mutated in human immunodeficiency with microcephaly. Cell, 124, 287–299.
-
(2006)
Cell
, vol.124
, pp. 287-299
-
-
Buck, D.1
Malivert, L.2
Dechasseval, R.3
Barraud, A.4
Fondaneche, M.-C.5
Xanal, O.6
Plebani, A.7
Stephan, J.-L.8
Hufnagel, M.9
Lediest, F.10
Fischer, A.11
Durrandy, A.12
Villartay, J.-P.D.13
Revy, P.14
-
7
-
-
0035941229
-
Eukaryotic DNA polymerases: Proposal for a revised nomenclature
-
Burgers, P. M., Koonin, E. V., Bruford, E., Blanco, L., Burtis, K. C., Christman, M. F., Copeland, W. C., Friedberg, E. C., Hanaoka, F., Hinkle, D. C., Lawrence, L. W., Nakanishi, M., Ohmori, H., Prakash, L., Prakash, S., Reynaud, C. A., Sugino, A., Todo, T., Wang, Z., Weill, J. C., and Woodgate, R. (2001) Eukaryotic DNA polymerases: proposal for a revised nomenclature. J Biol Chem, 276, 43487–43490.
-
(2001)
J Biol Chem
, vol.276
, pp. 43487-43490
-
-
Burgers, P.M.1
Koonin, E.V.2
Bruford, E.3
Blanco, L.4
Burtis, K.C.5
Christman, M.F.6
Copeland, W.C.7
Friedberg, E.C.8
Hanaoka, F.9
Hinkle, D.C.10
Lawrence, L.W.11
Nakanishi, M.12
Ohmori, H.13
Prakash, L.14
Prakash, S.15
Reynaud, C.A.16
Sugino, A.17
Todo, T.18
Wang, Z.19
Weill, J.C.20
Woodgate, R.21
more..
-
8
-
-
0018776894
-
Hydroperoxide metabolism in mammalian organs
-
Chance, B., Sies, H., and Boveris, A. (1979) Hydroperoxide metabolism in mammalian organs. Physiol Rev, 59, 527–603.
-
(1979)
Physiol Rev
, vol.59
, pp. 527-603
-
-
Chance, B.1
Sies, H.2
Boveris, A.3
-
9
-
-
0035930342
-
Promotion of DNA ligase IV-catalyzed DNA end-joining by the Rad50/Mre11/Xrs2 and Hdf1/Hdf2 complexes
-
Chen, L., Trujillo, K., Ramos, W., Sung, P., and Tomkinson, A. E. (2001) Promotion of DNA ligase IV-catalyzed DNA end-joining by the Rad50/Mre11/Xrs2 and Hdf1/Hdf2 complexes. Mol Cell, 8, 1105–1115.
-
(2001)
Mol Cell
, vol.8
, pp. 1105-1115
-
-
Chen, L.1
Trujillo, K.2
Ramos, W.3
Sung, P.4
Tomkinson, A.E.5
-
10
-
-
23844464546
-
DNA joint dependence of pol X family polymerase action in nonhomologous end joining
-
Daley, J. M., Laan, R. L. V., Suresh, A., and Wilson, T. E. (2005a) DNA joint dependence of pol X family polymerase action in nonhomologous end joining. J Biol Chem, 280, 29030–29037.
-
(2005)
J Biol Chem
, vol.280
, pp. 2
-
-
Daley, J.M.1
Laan, R.2
Suresh, A.3
Wilson, T.E.4
-
11
-
-
29244463205
-
Nonhomologous end joining in yeast
-
Daley, J. M., Palmbos, P. L., Wu, D., and Wilson, T. E. (2005b) Nonhomologous end joining in yeast. Ann Rev Genet, 39, 431–451.
-
(2005)
Ann Rev Genet
, vol.39
, pp. 431-451
-
-
Daley, J.M.1
Palmbos, P.L.2
Wu, D.3
Wilson, T.E.4
-
12
-
-
36549075614
-
Evidence that base stacking potential in annealed 3’ overhangs determines polymerase utilization in yeast nonhomologous end joining
-
Daley, J. M. and Wilson, T. E. (2007) Evidence that base stacking potential in annealed 3’ overhangs determines polymerase utilization in yeast nonhomologous end joining. DNA Repair (Amst), 7, 67–76.
-
(2007)
DNA Repair (Amst)
, vol.7
, pp. 67-76
-
-
Daley, J.M.1
Wilson, T.E.2
-
13
-
-
0024356877
-
HeLa nuclear protein recognizing DNA termini and translocating on DNA forming a regular DNA-multimeric protein complex
-
Devries, E., Vandriel, W., Bergsma, W. G., Arnberg, A. C., and Vandervliet, P. C. (1989) HeLa nuclear protein recognizing DNA termini and translocating on DNA forming a regular DNA-multimeric protein complex. J Mol Biol, 208, 65–78.
-
(1989)
J Mol Biol
, vol.208
, pp. 65-78
-
-
Devries, E.1
Vandriel, W.2
Bergsma, W.G.3
Arnberg, A.C.4
Vandervliet, P.C.5
-
14
-
-
0027156140
-
EBP-80, a transcription factor closely resembling the human autoantigen Ku, recognizes single- to double-strand transitions in DNA
-
Falzon, M., Fewell, J., and Kuff, E. L. (1993) EBP-80, a transcription factor closely resembling the human autoantigen Ku, recognizes single- to double-strand transitions in DNA. J Biol Chem, 268, 10546–10552.
-
(1993)
J Biol Chem
, vol.268
, pp. 10546-10552
-
-
Falzon, M.1
Fewell, J.2
Kuff, E.L.3
-
15
-
-
0035839840
-
DNA double-strand break repair and chromosomal translocations: Lessons from animal models
-
Ferguson, D. O. and Alt, F. W. (2001) DNA double-strand break repair and chromosomal translocations: lessons from animal models. Oncogene, 20, 5572–5579.
-
(2001)
Oncogene
, vol.20
, pp. 5572-5579
-
-
Ferguson, D.O.1
Alt, F.W.2
-
16
-
-
84934875944
-
The Molecular Biology of Leukemias
-
In: Coleman, W. B. and Tsongalis, G. J. (Eds.), Humana Press, Totowa
-
Gelb, A. B. and Medeiros, L. J. (2002) The Molecular Biology of Leukemias. In: Coleman, W. B. and Tsongalis, G. J. (Eds.) The Molecular Basis of Human Cancer, Humana Press, Totowa, pp. 427–459.
-
(2002)
The Molecular Basis of Human Cancer
, pp. 427-459
-
-
Gelb, A.B.1
Medeiros, L.J.2
-
17
-
-
33748089029
-
DNA-PK autophosphorylation facilitates Artemis endonuclease activity
-
Goodarzi, A. A., Yu, Y., Riballo, E., Douglas, P., Walker, S. A., Ye, R., Harer, C., Marchetti, C., Morrice, N., Jeggo, P. A., and Lees-Miller, S. P. (2006) DNA-PK autophosphorylation facilitates Artemis endonuclease activity. EMBO J, 25, 3880–3889.
-
(2006)
EMBO J
, vol.25
, pp. 3880-3889
-
-
Goodarzi, A.A.1
Yu, Y.2
Riballo, E.3
Douglas, P.4
Walker, S.A.5
Ye, R.6
Harer, C.7
Marchetti, C.8
Morrice, N.9
Jeggo, P.A.10
Lees-Miller, S.P.11
-
18
-
-
0030743386
-
Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cells
-
Grawunder, U., Wilm, M., Wu, X., Kulesza, P., Wilson, T. E., Mann, M., and Lieber, M. R. (1997) Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cells. Nature, 388, 492–495.
-
(1997)
Nature
, vol.388
, pp. 492-495
-
-
Grawunder, U.1
Wilm, M.2
Wu, X.3
Kulesza, P.4
Wilson, T.E.5
Mann, M.6
Lieber, M.R.7
-
19
-
-
33847193121
-
XRCC4:DNA ligase IV can ligate incompatible DNA ends and can ligate across gaps
-
Gu, J., Lu, H., Tippin, B., Shimazaki, N., Goodman, M. F., and Lieber, M. R. (2007a) XRCC4:DNA ligase IV can ligate incompatible DNA ends and can ligate across gaps. EMBO J, 26, 1010–1023.
-
(2007)
EMBO J
, vol.26
, pp. 1
-
-
Gu, J.1
Lu, H.2
Tippin, B.3
Shimazaki, N.4
Goodman, M.F.5
Lieber, M.R.6
-
20
-
-
34848841930
-
Single-stranded DNA ligation and XLF-stimulated incompatible DNA end ligation by the XRCC4-DNA ligase IV complex: Influence of terminal DNA sequence
-
Gu, J., Lu, H., Tsai, A. G., Schwarz, K., and Lieber, M. R. (2007b) Single-stranded DNA ligation and XLF-stimulated incompatible DNA end ligation by the XRCC4-DNA ligase IV complex: influence of terminal DNA sequence. Nucleic Acids Res, 35, 5755–5762.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 5755-5762
-
-
Gu, J.1
Lu, H.2
Tsai, A.G.3
Schwarz, K.4
Lieber, M.R.5
-
21
-
-
58149308524
-
Altered kinetics of nonhomologous end joining and class switch recombination in ligase IV – deficient B cells
-
Han, L. and Yu, K. (2008) Altered kinetics of nonhomologous end joining and class switch recombination in ligase IV – deficient B cells. J Exp Med, 205, 2745–2753.
-
(2008)
J Exp Med
, vol.205
, pp. 2745-2753
-
-
Han, L.1
Yu, K.2
-
22
-
-
0040247676
-
Eukaryotic DNA polymerases, a growing family
-
Hübscher, U., Nasheuer, H. P., and Syväoja, J. (2000) Eukaryotic DNA polymerases, a growing family. Trends Biochem Sci, 25, 143–147.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 143-147
-
-
Hübscher, U.1
Nasheuer, H.P.2
Syväoja, J.3
-
23
-
-
0343953047
-
Follicular lymphomas BCL-2/IgH junctions contain templated nucleotide insertions: Novel insights into the mechanism of t(14;18) translocation
-
Jaeger, U., Bocskor, S., Le, T., Mitterbauer, G., Bolz, I., Chott, A., Kneba, A., Mannhalter, C., and Nadel, B. (2000) Follicular lymphomas BCL-2/IgH junctions contain templated nucleotide insertions: novel insights into the mechanism of t(14;18) translocation. Blood, 95, 3520–3529.
-
(2000)
Blood
, vol.95
, pp. 3520-3529
-
-
Jaeger, U.1
Bocskor, S.2
Le, T.3
Mitterbauer, G.4
Bolz, I.5
Chott, A.6
Kneba, A.7
Mannhalter, C.8
Nadel, B.9
-
24
-
-
0030962091
-
Cryptic signals and the fidelity of V(D)J Joining
-
Lewis, S. M., Agard, E., Suh, S., and Czyzyk, L. (1997) Cryptic signals and the fidelity of V(D)J Joining. Mol Cell Biol, 17, 3125–3136.
-
(1997)
Mol Cell Biol
, vol.17
, pp. 3125-3136
-
-
Lewis, S.M.1
Agard, E.2
Suh, S.3
Czyzyk, L.4
-
25
-
-
38049034405
-
Crystal structure of human XLF/Cernunnos reveals unexpected differences from XRCC4 with implications for NHEJ
-
Li, Y., Chirgadze, D. Y., Bolanos-Garcia, V. M., Sibanda, B. L., Davies, O. R., Ahnesorg, P., Jackson, S. P., and Blundell, T. L. (2008) Crystal structure of human XLF/Cernunnos reveals unexpected differences from XRCC4 with implications for NHEJ. EMBO J, 27, 290–300.
-
(2008)
EMBO J
, vol.27
, pp. 290-300
-
-
Li, Y.1
Chirgadze, D.Y.2
Bolanos-Garcia, V.M.3
Sibanda, B.L.4
Davies, O.R.5
Ahnesorg, P.6
Jackson, S.P.7
Blundell, T.L.8
-
26
-
-
0032209738
-
Pathologic and physiologic double-strand breaks: Roles in cancer, aging, and the immune system
-
Lieber, M. R. (1998) Pathologic and physiologic double-strand breaks: roles in cancer, aging, and the immune system. Am J Path, 153, 1323–1332.
-
(1998)
Am J Path
, vol.153
, pp. 1323-1332
-
-
Lieber, M.R.1
-
27
-
-
33745989838
-
The polymerases for V(D)J recombination
-
Lieber, M. R. (2006) The polymerases for V(D)J recombination. Immunity, 25, 7–9.
-
(2006)
Immunity
, vol.25
, pp. 7-9
-
-
Lieber, M.R.1
-
28
-
-
38049115657
-
The mechanism of human nonhomologous DNA end joining
-
Lieber, M. R. (2008) The mechanism of human nonhomologous DNA end joining. J Biol Chem, 283, 1–5.
-
(2008)
J Biol Chem
, vol.283
, pp. 1-5
-
-
Lieber, M.R.1
-
29
-
-
0346501885
-
Ageing, repetitive genomes and DNA damage
-
Lieber, M. R. and Karanjawala, Z. E. (2004) Ageing, repetitive genomes and DNA damage. Nature Rev Mol Cell Biol, 5, 69–75.
-
(2004)
Nature Rev Mol Cell Biol
, vol.5
, pp. 69-75
-
-
Lieber, M.R.1
Karanjawala, Z.E.2
-
30
-
-
0042839614
-
Mechanism and regulation of human non-homologous DNA end-joining
-
Lieber, M. R., Ma, Y., Pannicke, U., and Schwarz, K. (2003) Mechanism and regulation of human non-homologous DNA end-joining. Nature Rev Mol Cell Biol, 4, 712–720.
-
(2003)
Nature Rev Mol Cell Biol
, vol.4
, pp. 712-720
-
-
Lieber, M.R.1
Ma, Y.2
Pannicke, U.3
Schwarz, K.4
-
31
-
-
33748138991
-
Roles of nonhomologous DNA end joining, V(D)J recombination, and class switch recombination in chromosomal translocations
-
Lieber, M. R., Yu, K., and Raghavan, S. C. (2006) Roles of nonhomologous DNA end joining, V(D)J recombination, and class switch recombination in chromosomal translocations. DNA Repair, 5, 1234–1245.
-
(2006)
DNA Repair
, vol.5
, pp. 1234-1245
-
-
Lieber, M.R.1
Yu, K.2
Raghavan, S.C.3
-
32
-
-
0242468933
-
Yeast Mre11 and Rad1 proteins define a Ku-independent mechanism to repair double-strand breaks lacking overlapping end sequences
-
Ma, J. L., Kim, E. M., Haber, J. E., and Lee, S. E. (2003) Yeast Mre11 and Rad1 proteins define a Ku-independent mechanism to repair double-strand breaks lacking overlapping end sequences. Mol Cell Biol, 23, 8820–8828.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 8820-8828
-
-
Ma, J.L.1
Kim, E.M.2
Haber, J.E.3
Lee, S.E.4
-
33
-
-
9744241712
-
A biochemically defined system for mammalian nonhomologous DNA end joining
-
Ma, Y., Lu, H., Tippin, B., Goodman, M. F., Shimazaki, N., Koiwai, O., Hsieh, C.-L., Schwarz, K., and Lieber, M. R. (2004) A biochemically defined system for mammalian nonhomologous DNA end joining. Mol Cell, 16, 701–713.
-
(2004)
Mol Cell
, vol.16
, pp. 701-713
-
-
Ma, Y.1
Lu, H.2
Tippin, B.3
Goodman, M.F.4
Shimazaki, N.5
Koiwai, O.6
Hsieh, C.-L.7
Schwarz, K.8
Lieber, M.R.9
-
34
-
-
26644444577
-
The DNA-PKcs phosphorylation sites of human artemis
-
Ma, Y., Pannicke, U., Lu, H., Niewolik, D., Schwarz, K., and Lieber, M. R. (2005) The DNA-PKcs phosphorylation sites of human artemis. J Biol Chem, 280, 33839–33846.
-
(2005)
J Biol Chem
, vol.280
, pp. 33839-33846
-
-
Ma, Y.1
Pannicke, U.2
Lu, H.3
Niewolik, D.4
Schwarz, K.5
Lieber, M.R.6
-
35
-
-
0037155703
-
Hairpin opening and overhang processing by an Artemis: DNA-PKcs complex in V(D)J recombination and in nonhomologous end joining
-
Ma, Y., Pannicke, U., Schwarz, K., and Lieber, M. R. (2002) Hairpin opening and overhang processing by an Artemis: DNA-PKcs complex in V(D)J recombination and in nonhomologous end joining. Cell, 108, 781–794.
-
(2002)
Cell
, vol.108
, pp. 781-794
-
-
Ma, Y.1
Pannicke, U.2
Schwarz, K.3
Lieber, M.R.4
-
36
-
-
0021821798
-
Increased chromosomal aberrations in first metaphases of cells isolated from the kidneys of aged mice
-
Martin, G. M., Smith, A. C., Ketterer, D. J., Ogburn, C. E., and Disteche, C. M. (1985) Increased chromosomal aberrations in first metaphases of cells isolated from the kidneys of aged mice. Israel J Med Sci, 21, 296–301.
-
(1985)
Israel J Med Sci
, vol.21
, pp. 296-301
-
-
Martin, G.M.1
Smith, A.C.2
Ketterer, D.J.3
Ogburn, C.E.4
Disteche, C.M.5
-
37
-
-
35748960204
-
The X family portrait: Structural insights into biological functions of X family polymerases
-
Moon, A. F., Garcia-Diaz, M., Batra, V. K., Beard, W. A., Bebenek, K., Kunkel, T. A., Wilson, S. H., and Pedersen, L. C. (2007) The X family portrait: structural insights into biological functions of X family polymerases. DNA Repair (Amst), 6, 1709–1725.
-
(2007)
DNA Repair (Amst)
, vol.6
, pp. 1709-1725
-
-
Moon, A.F.1
Garcia-Diaz, M.2
Batra, V.K.3
Beard, W.A.4
Bebenek, K.5
Kunkel, T.A.6
Wilson, S.H.7
Pedersen, L.C.8
-
38
-
-
84934880359
-
DNA Polymerases
-
In: Ganten, D. and Ruckpaul, K. E. (Eds.), Springer Verlag, Berlin-Heidelberg-NewYork
-
Nasheuer, H. P., Pospiech, H., and Syväoja, J. (2006) DNA Polymerases. In: Ganten, D. and Ruckpaul, K. E. (Eds.) Encyclopedic Reference of Genomics and Proteomics in Molecular Medicine, Springer Verlag, Berlin-Heidelberg-NewYork.
-
(2006)
Encyclopedic Reference of Genomics and Proteomics in Molecular Medicine
-
-
Nasheuer, H.P.1
Pospiech, H.2
Syväoja, J.3
-
39
-
-
23044453811
-
A gradient of template dependence defines distinct biological roles for family x polymerases in nonhomologous end joining
-
Nick McElhinny, S. A., Havener, J. M., Garcia-Diaz, M., Juarez, R., Bebenek, K., Kee, B. L., Blanco, L., Kunkel, T. A., and Ramsden, D. A. (2005) A gradient of template dependence defines distinct biological roles for family x polymerases in nonhomologous end joining. Mol Cell, 19, 357–366.
-
(2005)
Mol Cell
, vol.19
, pp. 357-366
-
-
Nick Mcelhinny, S.A.1
Havener, J.M.2
Garcia-Diaz, M.3
Juarez, R.4
Bebenek, K.5
Kee, B.L.6
Blanco, L.7
Kunkel, T.A.8
Ramsden, D.A.9
-
40
-
-
33750685856
-
DNA-PKcs dependence of artemis endonucleolytic activity: Differences between hairpins and 5’ or 3’ overhangs
-
Niewolik, D., Pannicke, U., Lu, H., Ma, Y., Wang, L. C., Kulesza, P., Zandi, E., Lieber, M. R., and Schwarz, K. (2006) DNA-PKcs dependence of artemis endonucleolytic activity: differences between hairpins and 5’ or 3’ overhangs. J Biol Chem, 281, 33900–33909.
-
(2006)
J Biol Chem
, vol.281
, pp. 33900-33909
-
-
Niewolik, D.1
Pannicke, U.2
Lu, H.3
Ma, Y.4
Wang, L.C.5
Kulesza, P.6
Zandi, E.7
Lieber, M.R.8
Schwarz, K.9
-
41
-
-
34247604497
-
The structure-specific nicking of small heteroduplexes by the RAG complex: Implications for lymphoid chromosomal translocations
-
Raghavan, S. C., Gu, J., Swanson, P. C., and Lieber, M. R. (2007) The structure-specific nicking of small heteroduplexes by the RAG complex: implications for lymphoid chromosomal translocations. DNA Repair (Amst), 6, 751–759.
-
(2007)
DNA Repair (Amst)
, vol.6
, pp. 751-759
-
-
Raghavan, S.C.1
Gu, J.2
Swanson, P.C.3
Lieber, M.R.4
-
42
-
-
0035800747
-
Analysis of the V(D)J recombination efficiency at lymphoid chromosomal translocation breakpoints
-
Raghavan, S. C., Kirsch, I. R., and Lieber, M. R. (2001) Analysis of the V(D)J recombination efficiency at lymphoid chromosomal translocation breakpoints. J Biol Chem, 276, 29126–29133.
-
(2001)
J Biol Chem
, vol.276
, pp. 2
-
-
Raghavan, S.C.1
Kirsch, I.R.2
Lieber, M.R.3
-
43
-
-
33646359685
-
DNA structures at chromosomal translocation sites
-
Raghavan, S. C. and Lieber, M. R. (2006) DNA structures at chromosomal translocation sites. BioEssays, 28, 480–494.
-
(2006)
Bioessays
, vol.28
, pp. 480-494
-
-
Raghavan, S.C.1
Lieber, M.R.2
-
44
-
-
21744455557
-
Double-strand break formation by the RAG complex at the bcl-2 Mbr and at other non-B DNA structures in vitro
-
Raghavan, S. C., Swanson, P. C., Ma, Y., and Lieber, M. R. (2005a) Double-strand break formation by the RAG complex at the bcl-2 Mbr and at other non-B DNA structures in vitro. Mol Cell Biol, 25, 5904–5919.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 5904-5919
-
-
Raghavan, S.C.1
Swanson, P.C.2
Ma, Y.3
Lieber, M.R.4
-
45
-
-
1542287213
-
A non-B-DNA structure at the bcl-2 major break point region is cleaved by the RAG complex
-
Raghavan, S. C., Swanson, P. C., Wu, X., Hsieh, C.-L., and Lieber, M. R. (2004a) A non-B-DNA structure at the bcl-2 major break point region is cleaved by the RAG complex. Nature, 428, 88–93.
-
(2004)
Nature
, vol.428
, pp. 8
-
-
Raghavan, S.C.1
Swanson, P.C.2
Wu, X.3
Hsieh, C.-L.4
Lieber, M.R.5
-
46
-
-
0345316715
-
Human DNA polymerase lambda possesses terminal deoxyribonucleotidyl transferase activity and can elongate RNA primers: Implications for novel functions
-
Ramadan, K., Maga, G., Shevelev, I. V., Villani, G., Blanco, L., and Hubscher, U. (2003) Human DNA polymerase lambda possesses terminal deoxyribonucleotidyl transferase activity and can elongate RNA primers: implications for novel functions. J Mol Biol, 328, 63–72.
-
(2003)
J Mol Biol
, vol.328
, pp. 63-72
-
-
Ramadan, K.1
Maga, G.2
Shevelev, I.V.3
Villani, G.4
Blanco, L.5
Hubscher, U.6
-
47
-
-
2342568939
-
De novo DNA synthesis by human DNA polymerase lambda, DNA polymerase mu, and terminal deoxynucleotidyl transferase
-
Ramadan, K., Shevelev, I. V., Maga, G., and Hubscher, U. (2004) De novo DNA synthesis by human DNA polymerase lambda, DNA polymerase mu, and terminal deoxynucleotidyl transferase. J Mol Biol, 339, 395–404.
-
(2004)
J Mol Biol
, vol.339
, pp. 395-404
-
-
Ramadan, K.1
Shevelev, I.V.2
Maga, G.3
Hubscher, U.4
-
48
-
-
0030749258
-
A newly identified DNA ligase of S. Cerevisiae involved in RAD52-independent repair of DNA double-strand breaks
-
Schar, P., Herrmann, G., Daly, G., and Lindahl, T. (1997) A newly identified DNA ligase of S. cerevisiae involved in RAD52-independent repair of DNA double-strand breaks. Genes Dev, 11, 1912–1924.
-
(1997)
Genes Dev
, vol.11
, pp. 1912-1924
-
-
Schar, P.1
Herrmann, G.2
Daly, G.3
Lindahl, T.4
-
49
-
-
33747889217
-
Differential usage of non-homologous end-joining and homologous recombination in double strand break repair
-
Sonoda, E., Hochegger, H., Saberi, A., Taniguchi, Y., and Takeda, S. (2006) Differential usage of non-homologous end-joining and homologous recombination in double strand break repair. DNA Repair (Amst), 5, 1021–1029.
-
(2006)
DNA Repair (Amst)
, vol.5
, pp. 1021-1029
-
-
Sonoda, E.1
Hochegger, H.2
Saberi, A.3
Taniguchi, Y.4
Takeda, S.5
-
50
-
-
0030849085
-
Identification of S. Cerevisiae DNA ligase IV: Involvement in DNA double-strand break repair
-
Teo, S. H. and Jackson, S. P. (1997) Identification of S. cerevisiae DNA ligase IV: involvement in DNA double-strand break repair. EMBO J, 16, 4788–4795.
-
(1997)
EMBO J
, vol.16
, pp. 4788-4795
-
-
Teo, S.H.1
Jackson, S.P.2
-
51
-
-
65449166076
-
Conformational variants of duplex DNA correlated with cytosine-rich chromosomal fragile sites
-
Tsai, A. G., Engelhart, A. E., Hatmal, M. M., Houston, S. I., Hud, N. V., Haworth, I. S., and Lieber, M. R. (2009) Conformational variants of duplex DNA correlated with cytosine-rich chromosomal fragile sites. J Biol Chem, 284, 7157–7164.
-
(2009)
J Biol Chem
, vol.284
, pp. 7157-7164
-
-
Tsai, A.G.1
Engelhart, A.E.2
Hatmal, M.M.3
Houston, S.I.4
Hud, N.V.5
Haworth, I.S.6
Lieber, M.R.7
-
52
-
-
57349185631
-
Human chromosomal translocations at CpG sites and a theoretical basis for their lineage and stage specificity
-
Tsai, A. G., Lu, H., Raghavan, S. C., Muschen, M., Hsieh, C. L., and Lieber, M. R. (2008) Human chromosomal translocations at CpG sites and a theoretical basis for their lineage and stage specificity. Cell, 135, 1130–1142.
-
(2008)
Cell
, vol.135
, pp. 1130-1142
-
-
Tsai, A.G.1
Lu, H.2
Raghavan, S.C.3
Muschen, M.4
Hsieh, C.L.5
Lieber, M.R.6
-
53
-
-
0037160145
-
A physical and functional interaction between yeast Pol4 and Dnl4-Lif1 links DNA synthesis and ligation in nonhomologous end joining
-
Tseng, H. M. and Tomkinson, A. E. (2002) A physical and functional interaction between yeast Pol4 and Dnl4-Lif1 links DNA synthesis and ligation in nonhomologous end joining. J Biol Chem, 277, 45630–45637.
-
(2002)
J Biol Chem
, vol.277
, pp. 45630-45637
-
-
Tseng, H.M.1
Tomkinson, A.E.2
-
54
-
-
0035833552
-
Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair
-
Walker, J. R., Corpina, R. A., and Goldberg, J. (2001) Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair. Nature, 412, 607–614.
-
(2001)
Nature
, vol.412
, pp. 607-614
-
-
Walker, J.R.1
Corpina, R.A.2
Goldberg, J.3
-
55
-
-
0035866359
-
Templated nucleotide addition and immunoglobulin JH-gene utilization in t(11;14) junctions: Implications for the mechanism of translocation and the origin of mantle cell lymphoma
-
Welzel, N. T. T. L., Marculescu, R., Miterbauer, G., Chott, A., Pott, C., Kneba, M., Du, M. Q., Kusec, R., Drach, J., Raderer, M., Mannhalter, C., Lechner, K., Nadel, B., and Jaeger, U. (2001) Templated nucleotide addition and immunoglobulin JH-gene utilization in t(11;14) junctions: implications for the mechanism of translocation and the origin of mantle cell lymphoma. Cancer Res, 61, 1629–1636.
-
(2001)
Cancer Res
, vol.61
, pp. 1629-1636
-
-
Welzel, N.1
Marculescu, R.2
Miterbauer, G.3
Chott, A.4
Pott, C.5
Kneba, M.6
Du, M.Q.7
Kusec, R.8
Drach, J.9
Raderer, M.10
Mannhalter, C.11
Lechner, K.12
Nadel, B.13
Jaeger, U.14
-
56
-
-
0031708232
-
Productive and nonproductive complexes of Ku and DNA-PK at DNA termini
-
West, R. B., Yaneva, M., and Lieber, M. R. (1998) Productive and nonproductive complexes of Ku and DNA-PK at DNA termini. Mol Cell Biol, 18, 5908–5920.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 5908-5920
-
-
West, R.B.1
Yaneva, M.2
Lieber, M.R.3
-
57
-
-
18744372705
-
Site-specific translocation and evidence of postnatal origin of the t(1;19) E2A-PBX1 fusion in childhood acute lymphoblastic leukemia
-
Wiemels, J. L., Leonard, B. C., Wang, Y., Segal, M. R., Hunger, S. P., Smith, M. T., Crouse, V., Ma, X., Buffler, P. A., and Pine, S. R. (2002) Site-specific translocation and evidence of postnatal origin of the t(1;19) E2A-PBX1 fusion in childhood acute lymphoblastic leukemia. Proc Natl Acad Sci USA, 99, 15101–15106.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 15101-15106
-
-
Wiemels, J.L.1
Leonard, B.C.2
Wang, Y.3
Segal, M.R.4
Hunger, S.P.5
Smith, M.T.6
Crouse, V.7
Ma, X.8
Buffler, P.A.9
Pine, S.R.10
-
58
-
-
0030811523
-
Yeast DNA ligase IV mediates non-homologous DNA end joining
-
Wilson, T. E., Grawunder, U., and Lieber, M. R. (1997) Yeast DNA ligase IV mediates non-homologous DNA end joining. Nature, 388, 495–498.
-
(1997)
Nature
, vol.388
, pp. 495-498
-
-
Wilson, T.E.1
Grawunder, U.2
Lieber, M.R.3
-
59
-
-
0033551662
-
Efficient processing of DNA ends during yeast nonhomol-ogous end joining: Evidence for a DNA polymerase beta (POL4)-dependent pathway
-
Wilson, T. E. and Lieber, M. R. (1999) Efficient processing of DNA ends during yeast nonhomol-ogous end joining: evidence for a DNA polymerase beta (POL4)-dependent pathway. J Biol Chem, 274, 23599–23609.
-
(1999)
J Biol Chem
, vol.274
, pp. 23599-23609
-
-
Wilson, T.E.1
Lieber, M.R.2
-
60
-
-
0030746109
-
Interaction of DNA-dependent protein kinase with DNA and with Ku: Biochemical and atomic-force microscopy
-
Yaneva, M., Kowalewski, T., and Lieber, M. R. (1997) Interaction of DNA-dependent protein kinase with DNA and with Ku: biochemical and atomic-force microscopy. EMBO J, 16, 5098–5112.
-
(1997)
EMBO J
, vol.16
, pp. 5098-5112
-
-
Yaneva, M.1
Kowalewski, T.2
Lieber, M.R.3
-
61
-
-
0033368701
-
Meiotic chromosomes: Integrating structure and function
-
Zickler, D. and Kleckner, N. (1999) Meiotic chromosomes: integrating structure and function. Annu Rev Genet, 33, 603–754.
-
(1999)
Annu Rev Genet
, vol.33
, pp. 603-754
-
-
Zickler, D.1
Kleckner, N.2
|