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Volumn 83, Issue 1, 2015, Pages 62-77

Roles and activities of chromatin remodeling ATPases in plants

Author keywords

CHD3 subgroup chromatin remodeling ATPases; developmental phase transitions; stem cell maintenance and differentiation; stress response and growth; SWItch Sucrose Non Fermentable (SWI SNF) subgroup chromatin remodeling ATPases

Indexed keywords

STEM CELLS;

EID: 84932192472     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12877     Document Type: Article
Times cited : (129)

References (186)
  • 1
    • 70149103623 scopus 로고    scopus 로고
    • CHD3 proteins and polycomb group proteins antagonistically determine cell identity in Arabidopsis
    • Aichinger, E., Villar, C.B., Farrona, S., Reyes, J.C., Hennig, L., and, Kohler, C., (2009) CHD3 proteins and polycomb group proteins antagonistically determine cell identity in Arabidopsis. PLoS Genet. 5, e1000605.
    • (2009) PLoS Genet. , vol.5 , pp. e1000605
    • Aichinger, E.1    Villar, C.B.2    Farrona, S.3    Reyes, J.C.4    Hennig, L.5    Kohler, C.6
  • 2
    • 79955579142 scopus 로고    scopus 로고
    • The CHD3 chromatin remodeler PICKLE and polycomb group proteins antagonistically regulate meristem activity in the Arabidopsis root
    • Aichinger, E., Villar, C.B., Di Mambro, R., Sabatini, S., and, Kohler, C., (2011) The CHD3 chromatin remodeler PICKLE and polycomb group proteins antagonistically regulate meristem activity in the Arabidopsis root. Plant Cell, 23, 1047-1060.
    • (2011) Plant Cell , vol.23 , pp. 1047-1060
    • Aichinger, E.1    Villar, C.B.2    Di Mambro, R.3    Sabatini, S.4    Kohler, C.5
  • 3
    • 67349185569 scopus 로고    scopus 로고
    • Genetic analysis of functional redundancy of BRM ATPase and ATSWI3C subunits of Arabidopsis SWI/SNF chromatin remodelling complexes
    • Archacki, R., Sarnowski, T.J., Halibart-Puzio, J., Brzeska, K., Buszewicz, D., Prymakowska-Bosak, M., Koncz, C., and, Jerzmanowski, A., (2009) Genetic analysis of functional redundancy of BRM ATPase and ATSWI3C subunits of Arabidopsis SWI/SNF chromatin remodelling complexes. Planta, 229, 1281-1292.
    • (2009) Planta , vol.229 , pp. 1281-1292
    • Archacki, R.1    Sarnowski, T.J.2    Halibart-Puzio, J.3    Brzeska, K.4    Buszewicz, D.5    Prymakowska-Bosak, M.6    Koncz, C.7    Jerzmanowski, A.8
  • 4
    • 84874916165 scopus 로고    scopus 로고
    • BRAHMA ATPase of the SWI/SNF chromatin remodeling complex acts as a positive regulator of gibberellin-mediated responses in arabidopsis
    • Archacki, R., Buszewicz, D., Sarnowski, T.J., et al. (2013) BRAHMA ATPase of the SWI/SNF chromatin remodeling complex acts as a positive regulator of gibberellin-mediated responses in arabidopsis. PLoS One, 8, e58588.
    • (2013) PLoS One , vol.8 , pp. e58588
    • Archacki, R.1    Buszewicz, D.2    Sarnowski, T.J.3
  • 5
    • 34147101544 scopus 로고    scopus 로고
    • INO80 subfamily of chromatin remodeling complexes
    • Bao, Y., and, Shen, X., (2007) INO80 subfamily of chromatin remodeling complexes. Mutat. Res. 618, 18-29.
    • (2007) Mutat. Res. , vol.618 , pp. 18-29
    • Bao, Y.1    Shen, X.2
  • 6
    • 84861881090 scopus 로고    scopus 로고
    • Manipulating resource allocation in plants
    • Bennett, E., Roberts, J.A., and, Wagstaff, C., (2012) Manipulating resource allocation in plants. J. Exp. Bot. 63, 3391-3400.
    • (2012) J. Exp. Bot. , vol.63 , pp. 3391-3400
    • Bennett, E.1    Roberts, J.A.2    Wagstaff, C.3
  • 7
    • 84885373715 scopus 로고    scopus 로고
    • DNA repair choice defines a common pathway for recruitment of chromatin regulators
    • Bennett, G., Papamichos-Chronakis, M., and, Peterson, C.L., (2013) DNA repair choice defines a common pathway for recruitment of chromatin regulators. Nat. Commun. 4, 2084.
    • (2013) Nat. Commun. , vol.4 , pp. 2084
    • Bennett, G.1    Papamichos-Chronakis, M.2    Peterson, C.L.3
  • 8
    • 34047134217 scopus 로고    scopus 로고
    • Unique, shared, and redundant roles for the Arabidopsis SWI/SNF chromatin remodeling ATPases BRAHMA and SPLAYED
    • Bezhani, S., Winter, C., Hershman, S., Wagner, J.D., Kennedy, J.F., Kwon, C.S., Pfluger, J., Su, Y., and, Wagner, D., (2007) Unique, shared, and redundant roles for the Arabidopsis SWI/SNF chromatin remodeling ATPases BRAHMA and SPLAYED. Plant Cell, 19, 403-416.
    • (2007) Plant Cell , vol.19 , pp. 403-416
    • Bezhani, S.1    Winter, C.2    Hershman, S.3    Wagner, J.D.4    Kennedy, J.F.5    Kwon, C.S.6    Pfluger, J.7    Su, Y.8    Wagner, D.9
  • 9
    • 4444257009 scopus 로고    scopus 로고
    • Network building: Transcriptional circuits in the root
    • Birnbaum, K., and, Benfey, P.N., (2004) Network building: transcriptional circuits in the root. Curr. Opin. Plant Biol. 7, 582-588.
    • (2004) Curr. Opin. Plant Biol. , vol.7 , pp. 582-588
    • Birnbaum, K.1    Benfey, P.N.2
  • 10
    • 0037093537 scopus 로고    scopus 로고
    • The dMi-2 chromodomains are DNA binding modules important for ATP-dependent nucleosome mobilization
    • Bouazoune, K., Mitterweger, A., Langst, G., Imhof, A., Akhtar, A., Becker, P.B., and, Brehm, A., (2002) The dMi-2 chromodomains are DNA binding modules important for ATP-dependent nucleosome mobilization. EMBO J. 21, 2430-2440.
    • (2002) EMBO J. , vol.21 , pp. 2430-2440
    • Bouazoune, K.1    Mitterweger, A.2    Langst, G.3    Imhof, A.4    Akhtar, A.5    Becker, P.B.6    Brehm, A.7
  • 11
    • 70249121045 scopus 로고    scopus 로고
    • The logic of chromatin architecture and remodelling at promoters
    • Cairns, B.R., (2009) The logic of chromatin architecture and remodelling at promoters. Nature, 461, 193-198.
    • (2009) Nature , vol.461 , pp. 193-198
    • Cairns, B.R.1
  • 12
    • 29544451829 scopus 로고    scopus 로고
    • SUPPRESSOR of FRIGIDA3 encodes a nuclear ACTIN-RELATED PROTEIN6 required for floral repression in Arabidopsis
    • Choi, K., Kim, S., Kim, S.Y., Kim, M., Hyun, Y., Lee, H., Choe, S., Kim, S.G., Michaels, S., and, Lee, I., (2005) SUPPRESSOR OF FRIGIDA3 encodes a nuclear ACTIN-RELATED PROTEIN6 required for floral repression in Arabidopsis. Plant Cell, 17, 2647-2660.
    • (2005) Plant Cell , vol.17 , pp. 2647-2660
    • Choi, K.1    Kim, S.2    Kim, S.Y.3    Kim, M.4    Hyun, Y.5    Lee, H.6    Choe, S.7    Kim, S.G.8    Michaels, S.9    Lee, I.10
  • 13
    • 34250656531 scopus 로고    scopus 로고
    • Arabidopsis homologs of components of the SWR1 complex regulate flowering and plant development
    • Choi, K., Park, C., Lee, J., Oh, M., Noh, B., and, Lee, I., (2007) Arabidopsis homologs of components of the SWR1 complex regulate flowering and plant development. Development, 134, 1931-1941.
    • (2007) Development , vol.134 , pp. 1931-1941
    • Choi, K.1    Park, C.2    Lee, J.3    Oh, M.4    Noh, B.5    Lee, I.6
  • 14
    • 67650725820 scopus 로고    scopus 로고
    • The biology of chromatin remodeling complexes
    • Clapier, C.R., and, Cairns, B.R., (2009) The biology of chromatin remodeling complexes. Annu. Rev. Biochem. 78, 273-304.
    • (2009) Annu. Rev. Biochem. , vol.78 , pp. 273-304
    • Clapier, C.R.1    Cairns, B.R.2
  • 15
    • 84871023769 scopus 로고    scopus 로고
    • Regulation of ISWI involves inhibitory modules antagonized by nucleosomal epitopes
    • Clapier, C.R., and, Cairns, B.R., (2012) Regulation of ISWI involves inhibitory modules antagonized by nucleosomal epitopes. Nature, 492, 280-284.
    • (2012) Nature , vol.492 , pp. 280-284
    • Clapier, C.R.1    Cairns, B.R.2
  • 16
    • 84868122260 scopus 로고    scopus 로고
    • Deposition of histone variant H2A.Z within gene bodies regulates responsive genes
    • Coleman-Derr, D., and, Zilberman, D., (2012) Deposition of histone variant H2A.Z within gene bodies regulates responsive genes. PLoS Genet. 8, e1002988.
    • (2012) PLoS Genet. , vol.8 , pp. e1002988
    • Coleman-Derr, D.1    Zilberman, D.2
  • 17
    • 0036899341 scopus 로고    scopus 로고
    • An ACF1-ISWI chromatin-remodeling complex is required for DNA replication through heterochromatin
    • Collins, N., Poot, R.A., Kukimoto, I., Garcia-Jimenez, C., Dellaire, G., and, Varga-Weisz, P.D., (2002) An ACF1-ISWI chromatin-remodeling complex is required for DNA replication through heterochromatin. Nat. Genet. 32, 627-632.
    • (2002) Nat. Genet. , vol.32 , pp. 627-632
    • Collins, N.1    Poot, R.A.2    Kukimoto, I.3    Garcia-Jimenez, C.4    Dellaire, G.5    Varga-Weisz, P.D.6
  • 18
    • 1542358189 scopus 로고    scopus 로고
    • Multiple roles for ISWI in transcription, chromosome organization and DNA replication
    • Corona, D.F., and, Tamkun, J.W., (2004) Multiple roles for ISWI in transcription, chromosome organization and DNA replication. Biochim. Biophys. Acta, 1677, 113-119.
    • (2004) Biochim. Biophys. Acta , vol.1677 , pp. 113-119
    • Corona, D.F.1    Tamkun, J.W.2
  • 19
    • 0033617334 scopus 로고    scopus 로고
    • Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter
    • Cosma, M.P., Tanaka, T., and, Nasmyth, K., (1999) Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter. Cell, 97, 299-311.
    • (1999) Cell , vol.97 , pp. 299-311
    • Cosma, M.P.1    Tanaka, T.2    Nasmyth, K.3
  • 20
    • 84872855164 scopus 로고    scopus 로고
    • A gene loop containing the floral repressor FLC is disrupted in the early phase of vernalization
    • Crevillen, P., Sonmez, C., Wu, Z., and, Dean, C., (2013) A gene loop containing the floral repressor FLC is disrupted in the early phase of vernalization. EMBO J. 32, 140-148.
    • (2013) EMBO J. , vol.32 , pp. 140-148
    • Crevillen, P.1    Sonmez, C.2    Wu, Z.3    Dean, C.4
  • 21
    • 77249130800 scopus 로고    scopus 로고
    • Gene regulation: A chromatin thermostat
    • Deal, R.B., and, Henikoff, S., (2010) Gene regulation: a chromatin thermostat. Nature, 463, 887-888.
    • (2010) Nature , vol.463 , pp. 887-888
    • Deal, R.B.1    Henikoff, S.2
  • 22
    • 78651081445 scopus 로고    scopus 로고
    • The INTACT method for cell type-specific gene expression and chromatin profiling in Arabidopsis thaliana
    • Deal, R.B., and, Henikoff, S., (2011) The INTACT method for cell type-specific gene expression and chromatin profiling in Arabidopsis thaliana. Nat. Protoc. 6, 56-68.
    • (2011) Nat. Protoc. , vol.6 , pp. 56-68
    • Deal, R.B.1    Henikoff, S.2
  • 23
    • 28544445054 scopus 로고    scopus 로고
    • The nuclear actin-related protein ARP6 is a pleiotropic developmental regulator required for the maintenance of FLOWERING LOCUS C expression and repression of flowering in Arabidopsis
    • Deal, R.B., Kandasamy, M.K., McKinney, E.C., and, Meagher, R.B., (2005) The nuclear actin-related protein ARP6 is a pleiotropic developmental regulator required for the maintenance of FLOWERING LOCUS C expression and repression of flowering in Arabidopsis. Plant Cell, 17, 2633-2646.
    • (2005) Plant Cell , vol.17 , pp. 2633-2646
    • Deal, R.B.1    Kandasamy, M.K.2    McKinney, E.C.3    Meagher, R.B.4
  • 24
    • 34249820562 scopus 로고    scopus 로고
    • Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z
    • Deal, R.B., Topp, C.N., McKinney, E.C., and, Meagher, R.B., (2007) Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z. Plant Cell, 19, 74-83.
    • (2007) Plant Cell , vol.19 , pp. 74-83
    • Deal, R.B.1    Topp, C.N.2    McKinney, E.C.3    Meagher, R.B.4
  • 25
    • 0038304813 scopus 로고    scopus 로고
    • Coordinate repression of regulators of embryonic identity by PICKLE during germination in Arabidopsis
    • Dean Rider, S. Jr, Henderson, J.T., Jerome, R.E., Edenberg, H.J., Romero-Severson, J., and, Ogas, J., (2003) Coordinate repression of regulators of embryonic identity by PICKLE during germination in Arabidopsis. Plant J. 35, 33-43.
    • (2003) Plant J. , vol.35 , pp. 33-43
    • Dean Rider, Jr.S.1    Henderson, J.T.2    Jerome, R.E.3    Edenberg, H.J.4    Romero-Severson, J.5    Ogas, J.6
  • 26
    • 34547856653 scopus 로고    scopus 로고
    • The human Mi-2/NuRD complex and gene regulation
    • Denslow, S.A., and, Wade, P.A., (2007) The human Mi-2/NuRD complex and gene regulation. Oncogene, 26, 5433-5438.
    • (2007) Oncogene , vol.26 , pp. 5433-5438
    • Denslow, S.A.1    Wade, P.A.2
  • 29
    • 84881540507 scopus 로고    scopus 로고
    • CHD5 is required for neurogenesis and has a dual role in facilitating gene expression and polycomb gene repression
    • Egan, C.M., Nyman, U., Skotte, J., et al. (2013) CHD5 is required for neurogenesis and has a dual role in facilitating gene expression and polycomb gene repression. Dev. Cell, 26, 223-236.
    • (2013) Dev. Cell , vol.26 , pp. 223-236
    • Egan, C.M.1    Nyman, U.2    Skotte, J.3
  • 30
    • 80052962505 scopus 로고    scopus 로고
    • Chromatin remodelling in mammalian cells by ISWI-type complexes-where, when and why?
    • Erdel, F., and, Rippe, K., (2011) Chromatin remodelling in mammalian cells by ISWI-type complexes-where, when and why? FEBS J. 278, 3608-3618.
    • (2011) FEBS J. , vol.278 , pp. 3608-3618
    • Erdel, F.1    Rippe, K.2
  • 31
    • 0032692566 scopus 로고    scopus 로고
    • Distinct mechanisms promote polarity establishment in carpels of Arabidopsis
    • Eshed, Y., Baum, S.F., and, Bowman, J.L., (1999) Distinct mechanisms promote polarity establishment in carpels of Arabidopsis. Cell, 99, 199-209.
    • (1999) Cell , vol.99 , pp. 199-209
    • Eshed, Y.1    Baum, S.F.2    Bowman, J.L.3
  • 32
    • 0035928780 scopus 로고    scopus 로고
    • Establishment of polarity in lateral organs of plants
    • Eshed, Y., Baum, S.F., Perea, J.V., and, Bowman, J.L., (2001) Establishment of polarity in lateral organs of plants. Curr. Biol. 11, 1251-1260.
    • (2001) Curr. Biol. , vol.11 , pp. 1251-1260
    • Eshed, Y.1    Baum, S.F.2    Perea, J.V.3    Bowman, J.L.4
  • 33
    • 8444224612 scopus 로고    scopus 로고
    • The Arabidopsis thaliana SNF2 homolog AtBRM controls shoot development and flowering
    • Farrona, S., Hurtado, L., Bowman, J.L., and, Reyes, J.C., (2004) The Arabidopsis thaliana SNF2 homolog AtBRM controls shoot development and flowering. Development, 131, 4965-4975.
    • (2004) Development , vol.131 , pp. 4965-4975
    • Farrona, S.1    Hurtado, L.2    Bowman, J.L.3    Reyes, J.C.4
  • 34
    • 34548827607 scopus 로고    scopus 로고
    • A nucleosome interaction module is required for normal function of Arabidopsis thaliana BRAHMA
    • Farrona, S., Hurtado, L., and, Reyes, J.C., (2007) A nucleosome interaction module is required for normal function of Arabidopsis thaliana BRAHMA. J. Mol. Biol. 373, 240-250.
    • (2007) J. Mol. Biol. , vol.373 , pp. 240-250
    • Farrona, S.1    Hurtado, L.2    Reyes, J.C.3
  • 36
    • 84866147738 scopus 로고    scopus 로고
    • The Drosophila MI-2 chromatin-remodeling factor regulates higher-order chromatin structure and cohesin dynamics in vivo
    • Fasulo, B., Deuring, R., Murawska, M., Gause, M., Dorighi, K.M., Schaaf, C.A., Dorsett, D., Brehm, A., and, Tamkun, J.W., (2012) The Drosophila MI-2 chromatin-remodeling factor regulates higher-order chromatin structure and cohesin dynamics in vivo. PLoS Genet. 8, e1002878.
    • (2012) PLoS Genet. , vol.8 , pp. e1002878
    • Fasulo, B.1    Deuring, R.2    Murawska, M.3    Gause, M.4    Dorighi, K.M.5    Schaaf, C.A.6    Dorsett, D.7    Brehm, A.8    Tamkun, J.W.9
  • 37
    • 0034106785 scopus 로고    scopus 로고
    • The Arabidopsis abscisic acid response gene ABI5 encodes a basic leucine zipper transcription factor
    • Finkelstein, R.R., and, Lynch, T.J., (2000) The Arabidopsis abscisic acid response gene ABI5 encodes a basic leucine zipper transcription factor. Plant Cell, 12, 599-609.
    • (2000) Plant Cell , vol.12 , pp. 599-609
    • Finkelstein, R.R.1    Lynch, T.J.2
  • 39
    • 33745122231 scopus 로고    scopus 로고
    • Identification of multiple distinct Snf2 subfamilies with conserved structural motifs
    • Flaus, A., Martin, D., Barton, G.J., and, Owen-Hughes, T., (2006) Identification of multiple distinct Snf2 subfamilies with conserved structural motifs. Nucleic Acids Res. 34, 2887.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 2887
    • Flaus, A.1    Martin, D.2    Barton, G.J.3    Owen-Hughes, T.4
  • 40
    • 84897504104 scopus 로고    scopus 로고
    • Over-expression of Arabidopsis AtCHR23 chromatin remodeling ATPase results in increased variability of growth and gene expression
    • Folta, A., Severing, E.I., Krauskopf, J., van de Geest, H., Verver, J., Nap, J.P., and, Mlynarova, L., (2014) Over-expression of Arabidopsis AtCHR23 chromatin remodeling ATPase results in increased variability of growth and gene expression. BMC Plant Biol. 14, 76.
    • (2014) BMC Plant Biol. , vol.14 , pp. 76
    • Folta, A.1    Severing, E.I.2    Krauskopf, J.3    Van De Geest, H.4    Verver, J.5    Nap, J.P.6    Mlynarova, L.7
  • 41
    • 8644273963 scopus 로고    scopus 로고
    • The INO80 protein controls homologous recombination in Arabidopsis thaliana
    • Fritsch, O., Benvenuto, G., Bowler, C., Molinier, J., and, Hohn, B., (2004) The INO80 protein controls homologous recombination in Arabidopsis thaliana. Mol. Cell, 16, 479-485.
    • (2004) Mol. Cell , vol.16 , pp. 479-485
    • Fritsch, O.1    Benvenuto, G.2    Bowler, C.3    Molinier, J.4    Hohn, B.5
  • 42
    • 5344280456 scopus 로고    scopus 로고
    • MTA3 and the Mi-2/NuRD complex regulate cell fate during B lymphocyte differentiation
    • Fujita, N., Jaye, D.L., Geigerman, C., Akyildiz, A., Mooney, M.R., Boss, J.M., and, Wade, P.A., (2004) MTA3 and the Mi-2/NuRD complex regulate cell fate during B lymphocyte differentiation. Cell, 119, 75-86.
    • (2004) Cell , vol.119 , pp. 75-86
    • Fujita, N.1    Jaye, D.L.2    Geigerman, C.3    Akyildiz, A.4    Mooney, M.R.5    Boss, J.M.6    Wade, P.A.7
  • 43
    • 33750010136 scopus 로고    scopus 로고
    • PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiation
    • Fukaki, H., Taniguchi, N., and, Tasaka, M., (2006) PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiation. Plant J. 48, 380-389.
    • (2006) Plant J. , vol.48 , pp. 380-389
    • Fukaki, H.1    Taniguchi, N.2    Tasaka, M.3
  • 44
    • 79953836732 scopus 로고    scopus 로고
    • The CKH2/PKL chromatin remodeling factor negatively regulates cytokinin responses in Arabidopsis calli
    • Furuta, K., Kubo, M., Sano, K., Demura, T., Fukuda, H., Liu, Y.G., Shibata, D., and, Kakimoto, T., (2011) The CKH2/PKL chromatin remodeling factor negatively regulates cytokinin responses in Arabidopsis calli. Plant Cell Physiol. 52, 618-628.
    • (2011) Plant Cell Physiol. , vol.52 , pp. 618-628
    • Furuta, K.1    Kubo, M.2    Sano, K.3    Demura, T.4    Fukuda, H.5    Liu, Y.G.6    Shibata, D.7    Kakimoto, T.8
  • 45
    • 84875758730 scopus 로고    scopus 로고
    • Lessons from the cancer genome
    • Garraway, L.A., and, Lander, E.S., (2013) Lessons from the cancer genome. Cell, 153, 17-37.
    • (2013) Cell , vol.153 , pp. 17-37
    • Garraway, L.A.1    Lander, E.S.2
  • 46
    • 0037072666 scopus 로고    scopus 로고
    • Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1
    • Gendrel, A.V., Lippman, Z., Yordan, C., Colot, V., and, Martienssen, R.A., (2002) Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1. Science, 297, 1871-1873.
    • (2002) Science , vol.297 , pp. 1871-1873
    • Gendrel, A.V.1    Lippman, Z.2    Yordan, C.3    Colot, V.4    Martienssen, R.A.5
  • 47
    • 84892497415 scopus 로고    scopus 로고
    • Remodelling chromatin to shape development of plants
    • Gentry, M., and, Hennig, L., (2014) Remodelling chromatin to shape development of plants. Exp. Cell Res. 321, 40-46.
    • (2014) Exp. Cell Res. , vol.321 , pp. 40-46
    • Gentry, M.1    Hennig, L.2
  • 49
    • 84906260701 scopus 로고    scopus 로고
    • MyomiR-dependent switching of BAF60 variant incorporation into Brg1 chromatin remodeling complexes during embryo myogenesis
    • Goljanek-Whysall, K., Mok, G.F., Fahad Alrefaei, A., Kennerley, N., Wheeler, G.N., and, Munsterberg, A., (2014) myomiR-dependent switching of BAF60 variant incorporation into Brg1 chromatin remodeling complexes during embryo myogenesis. Development, 141, 3378-3387.
    • (2014) Development , vol.141 , pp. 3378-3387
    • Goljanek-Whysall, K.1    Mok, G.F.2    Fahad Alrefaei, A.3    Kennerley, N.4    Wheeler, G.N.5    Munsterberg, A.6
  • 51
    • 84902369695 scopus 로고    scopus 로고
    • Role of chromatin in water stress responses in plants
    • Han, S.K., and, Wagner, D., (2014) Role of chromatin in water stress responses in plants. J. Exp. Bot. 65, 2785-2799.
    • (2014) J. Exp. Bot. , vol.65 , pp. 2785-2799
    • Han, S.K.1    Wagner, D.2
  • 52
    • 84873035194 scopus 로고    scopus 로고
    • The SWI2/SNF2 chromatin remodeling ATPase BRAHMA represses abscisic acid responses in the absence of the stress stimulus in Arabidopsis
    • Han, S.K., Sang, Y., Rodrigues, A., Biol, F., Wu, M.F., Rodriguez, P.L., and, Wagner, D., (2012) The SWI2/SNF2 chromatin remodeling ATPase BRAHMA represses abscisic acid responses in the absence of the stress stimulus in Arabidopsis. Plant Cell, 24, 4892-4906.
    • (2012) Plant Cell , vol.24 , pp. 4892-4906
    • Han, S.K.1    Sang, Y.2    Rodrigues, A.3    Biol, F.4    Wu, M.F.5    Rodriguez, P.L.6    Wagner, D.7
  • 53
    • 79952539053 scopus 로고    scopus 로고
    • ATP-dependent chromatin remodeling: Genetics, genomics and mechanisms
    • Hargreaves, D.C., and, Crabtree, G.R., (2011) ATP-dependent chromatin remodeling: genetics, genomics and mechanisms. Cell Res. 21, 396-420.
    • (2011) Cell Res. , vol.21 , pp. 396-420
    • Hargreaves, D.C.1    Crabtree, G.R.2
  • 54
    • 77956522905 scopus 로고    scopus 로고
    • The chromodomains of the Chd1 chromatin remodeler regulate DNA access to the ATPase motor
    • Hauk, G., McKnight, J.N., Nodelman, I.M., and, Bowman, G.D., (2010) The chromodomains of the Chd1 chromatin remodeler regulate DNA access to the ATPase motor. Mol. Cell, 39, 711-723.
    • (2010) Mol. Cell , vol.39 , pp. 711-723
    • Hauk, G.1    McKnight, J.N.2    Nodelman, I.M.3    Bowman, G.D.4
  • 55
    • 33847334699 scopus 로고    scopus 로고
    • Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
    • Heintzman, N.D., Stuart, R.K., Hon, G., et al. (2007) Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nat. Genet. 39, 311-318.
    • (2007) Nat. Genet. , vol.39 , pp. 311-318
    • Heintzman, N.D.1    Stuart, R.K.2    Hon, G.3
  • 56
    • 84908693041 scopus 로고    scopus 로고
    • Vulnerabilities of mutant SWI/SNF complexes in cancer
    • Helming, K.C., Wang, X., and, Roberts, C.W., (2014) Vulnerabilities of mutant SWI/SNF complexes in cancer. Cancer Cell, 26, 309-317.
    • (2014) Cancer Cell , vol.26 , pp. 309-317
    • Helming, K.C.1    Wang, X.2    Roberts, C.W.3
  • 58
    • 65249173999 scopus 로고    scopus 로고
    • An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network
    • Ho, L., Jothi, R., Ronan, J.L., Cui, K., Zhao, K., and, Crabtree, G.R., (2009) An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network. Proc. Natl Acad. Sci. USA, 106, 5187.
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , pp. 5187
    • Ho, L.1    Jothi, R.2    Ronan, J.L.3    Cui, K.4    Zhao, K.5    Crabtree, G.R.6
  • 59
    • 79961002967 scopus 로고    scopus 로고
    • EsBAF facilitates pluripotency by conditioning the genome for LIF/STAT3 signalling and by regulating polycomb function
    • Ho, L., Miller, E.L., Ronan, J.L., Ho, W.Q., Jothi, R., and, Crabtree, G.R., (2011) esBAF facilitates pluripotency by conditioning the genome for LIF/STAT3 signalling and by regulating polycomb function. Nat. Cell Biol. 13, 903-913.
    • (2011) Nat. Cell Biol. , vol.13 , pp. 903-913
    • Ho, L.1    Miller, E.L.2    Ronan, J.L.3    Ho, W.Q.4    Jothi, R.5    Crabtree, G.R.6
  • 60
    • 84872416669 scopus 로고    scopus 로고
    • PICKLE is a CHD subfamily II ATP-dependent chromatin remodeling factor
    • Ho, K.K., Zhang, H., Golden, B.L., and, Ogas, J., (2013) PICKLE is a CHD subfamily II ATP-dependent chromatin remodeling factor. Biochim. Biophys. Acta, 1829, 199-210.
    • (2013) Biochim. Biophys. Acta , vol.1829 , pp. 199-210
    • Ho, K.K.1    Zhang, H.2    Golden, B.L.3    Ogas, J.4
  • 61
    • 84859589167 scopus 로고    scopus 로고
    • CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome
    • Hu, Y., Liu, D., Zhong, X., Zhang, C., Zhang, Q., and, Zhou, D.X., (2012) CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome. Proc. Natl Acad. Sci. USA, 109, 5773-5778.
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 5773-5778
    • Hu, Y.1    Liu, D.2    Zhong, X.3    Zhang, C.4    Zhang, Q.5    Zhou, D.X.6
  • 62
    • 84879449421 scopus 로고    scopus 로고
    • Analysis of rice Snf2 family proteins and their potential roles in epigenetic regulation
    • Hu, Y., Zhu, N., Wang, X., Yi, Q., Zhu, D., Lai, Y., and, Zhao, Y., (2013) Analysis of rice Snf2 family proteins and their potential roles in epigenetic regulation. Plant Physiol. Biochem. 70, 33-42.
    • (2013) Plant Physiol. Biochem. , vol.70 , pp. 33-42
    • Hu, Y.1    Zhu, N.2    Wang, X.3    Yi, Q.4    Zhu, D.5    Lai, Y.6    Zhao, Y.7
  • 63
    • 84902295305 scopus 로고    scopus 로고
    • Transcription regulation by CHD proteins to control plant development
    • Hu, Y., Lai, Y., and, Zhu, D., (2014) Transcription regulation by CHD proteins to control plant development. Front Plant Sci. 5, 223.
    • (2014) Front Plant Sci. , vol.5 , pp. 223
    • Hu, Y.1    Lai, Y.2    Zhu, D.3
  • 64
    • 28044454727 scopus 로고    scopus 로고
    • CHR11, a chromatin-remodeling factor essential for nuclear proliferation during female gametogenesis in Arabidopsis thaliana
    • Huanca-Mamani, W., Garcia-Aguilar, M., Leon-Martinez, G., Grossniklaus, U., and, Vielle-Calzada, J.P., (2005) CHR11, a chromatin-remodeling factor essential for nuclear proliferation during female gametogenesis in Arabidopsis thaliana. Proc. Natl Acad. Sci. USA, 102, 17231-17236.
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 17231-17236
    • Huanca-Mamani, W.1    Garcia-Aguilar, M.2    Leon-Martinez, G.3    Grossniklaus, U.4    Vielle-Calzada, J.P.5
  • 65
    • 33748524567 scopus 로고    scopus 로고
    • The putative SWI/SNF complex subunit BRAHMA activates flower homeotic genes in Arabidopsis thaliana
    • Hurtado, L., Farrona, S., and, Reyes, J.C., (2006) The putative SWI/SNF complex subunit BRAHMA activates flower homeotic genes in Arabidopsis thaliana. Plant Mol. Biol. 62, 291-304.
    • (2006) Plant Mol. Biol. , vol.62 , pp. 291-304
    • Hurtado, L.1    Farrona, S.2    Reyes, J.C.3
  • 66
    • 0032907728 scopus 로고    scopus 로고
    • Maintenance of genomic methylation requires a SWI2/SNF2-like protein
    • Jeddeloh, J.A., Stokes, T.L., and, Richards, E.J., (1999) Maintenance of genomic methylation requires a SWI2/SNF2-like protein. Nat. Genet. 22, 94-97.
    • (1999) Nat. Genet. , vol.22 , pp. 94-97
    • Jeddeloh, J.A.1    Stokes, T.L.2    Richards, E.J.3
  • 67
    • 84897062460 scopus 로고    scopus 로고
    • The BAF60 subunit of the SWI/SNF chromatin-remodeling complex directly controls the formation of a gene loop at FLOWERING LOCUS C in Arabidopsis
    • Jegu, T., Latrasse, D., Delarue, M., Hirt, H., Domenichini, S., Ariel, F., Crespi, M., Bergounioux, C., Raynaud, C., and, Benhamed, M., (2014) The BAF60 subunit of the SWI/SNF chromatin-remodeling complex directly controls the formation of a gene loop at FLOWERING LOCUS C in Arabidopsis. Plant Cell, 26, 538-551.
    • (2014) Plant Cell , vol.26 , pp. 538-551
    • Jegu, T.1    Latrasse, D.2    Delarue, M.3    Hirt, H.4    Domenichini, S.5    Ariel, F.6    Crespi, M.7    Bergounioux, C.8    Raynaud, C.9    Benhamed, M.10
  • 68
    • 34249794557 scopus 로고    scopus 로고
    • SWI/SNF chromatin remodeling and linker histones in plants
    • Jerzmanowski, A., (2007) SWI/SNF chromatin remodeling and linker histones in plants. Biochim. Biophys. Acta, 1769, 330-345.
    • (2007) Biochim. Biophys. Acta , vol.1769 , pp. 330-345
    • Jerzmanowski, A.1
  • 69
    • 34250745886 scopus 로고    scopus 로고
    • Nucleosome stability mediated by histone variants H3.3 and H2A.Z
    • Jin, C., and, Felsenfeld, G., (2007) Nucleosome stability mediated by histone variants H3.3 and H2A.Z. Genes Dev. 21, 1519-1529.
    • (2007) Genes Dev. , vol.21 , pp. 1519-1529
    • Jin, C.1    Felsenfeld, G.2
  • 70
    • 68149150830 scopus 로고    scopus 로고
    • H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
    • Jin, C., Zang, C., Wei, G., Cui, K., Peng, W., Zhao, K., and, Felsenfeld, G., (2009) H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions. Nat. Genet. 41, 941-945.
    • (2009) Nat. Genet. , vol.41 , pp. 941-945
    • Jin, C.1    Zang, C.2    Wei, G.3    Cui, K.4    Peng, W.5    Zhao, K.6    Felsenfeld, G.7
  • 71
    • 84874544118 scopus 로고    scopus 로고
    • Arabidopsis chromatin remodeling factor PICKLE interacts with transcription factor HY5 to regulate hypocotyl cell elongation
    • Jing, Y., Zhang, D., Wang, X., Tang, W., Wang, W., Huai, J., Xu, G., Chen, D., Li, Y., and, Lin, R., (2013) Arabidopsis chromatin remodeling factor PICKLE interacts with transcription factor HY5 to regulate hypocotyl cell elongation. Plant Cell, 25, 242-256.
    • (2013) Plant Cell , vol.25 , pp. 242-256
    • Jing, Y.1    Zhang, D.2    Wang, X.3    Tang, W.4    Wang, W.5    Huai, J.6    Xu, G.7    Chen, D.8    Li, Y.9    Lin, R.10
  • 72
    • 84878745222 scopus 로고    scopus 로고
    • Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy
    • Kadoch, C., Hargreaves, D.C., Hodges, C., Elias, L., Ho, L., Ranish, J., and, Crabtree, G.R., (2013) Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy. Nat. Genet. 45, 592-601.
    • (2013) Nat. Genet. , vol.45 , pp. 592-601
    • Kadoch, C.1    Hargreaves, D.C.2    Hodges, C.3    Elias, L.4    Ho, L.5    Ranish, J.6    Crabtree, G.R.7
  • 74
    • 0343091991 scopus 로고    scopus 로고
    • The Drosophila brahma complex is an essential coactivator for the trithorax group protein zeste
    • Kal, A.J., Mahmoudi, T., Zak, N.B., and, Verrijzer, C.P., (2000) The Drosophila brahma complex is an essential coactivator for the trithorax group protein zeste. Genes Dev. 14, 1058-1071.
    • (2000) Genes Dev. , vol.14 , pp. 1058-1071
    • Kal, A.J.1    Mahmoudi, T.2    Zak, N.B.3    Verrijzer, C.P.4
  • 75
    • 70349785075 scopus 로고    scopus 로고
    • Arabidopsis actin-related protein ARP5 in multicellular development and DNA repair
    • Kandasamy, M.K., McKinney, E.C., Deal, R.B., Smith, A.P., and, Meagher, R.B., (2009) Arabidopsis actin-related protein ARP5 in multicellular development and DNA repair. Dev. Biol. 335, 22-32.
    • (2009) Dev. Biol. , vol.335 , pp. 22-32
    • Kandasamy, M.K.1    McKinney, E.C.2    Deal, R.B.3    Smith, A.P.4    Meagher, R.B.5
  • 76
    • 2342505910 scopus 로고    scopus 로고
    • Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation
    • Kanno, T., Mette, M.F., Kreil, D.P., Aufsatz, W., Matzke, M., and, Matzke, A.J., (2004) Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation. Curr. Biol. 14, 801-805.
    • (2004) Curr. Biol. , vol.14 , pp. 801-805
    • Kanno, T.1    Mette, M.F.2    Kreil, D.P.3    Aufsatz, W.4    Matzke, M.5    Matzke, A.J.6
  • 77
    • 42649089072 scopus 로고    scopus 로고
    • A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation
    • Kanno, T., Bucher, E., Daxinger, L., Huettel, B., Bohmdorfer, G., Gregor, W., Kreil, D.P., Matzke, M., and, Matzke, A.J., (2008) A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation. Nat. Genet. 40, 670-675.
    • (2008) Nat. Genet. , vol.40 , pp. 670-675
    • Kanno, T.1    Bucher, E.2    Daxinger, L.3    Huettel, B.4    Bohmdorfer, G.5    Gregor, W.6    Kreil, D.P.7    Matzke, M.8    Matzke, A.J.9
  • 78
    • 60549103722 scopus 로고    scopus 로고
    • BRG1 requirement for long-range interaction of a locus control region with a downstream promoter
    • Kim, S.I., Bultman, S.J., Kiefer, C.M., Dean, A., and, Bresnick, E.H., (2009) BRG1 requirement for long-range interaction of a locus control region with a downstream promoter. Proc. Natl Acad. Sci. USA, 106, 2259-2264.
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , pp. 2259-2264
    • Kim, S.I.1    Bultman, S.J.2    Kiefer, C.M.3    Dean, A.4    Bresnick, E.H.5
  • 79
    • 53149133870 scopus 로고    scopus 로고
    • Snf2 proteins in plants: Gene silencing and beyond
    • Knizewski, L., Ginalski, K., and, Jerzmanowski, A., (2008) Snf2 proteins in plants: gene silencing and beyond. Trends Plant Sci. 13, 557-565.
    • (2008) Trends Plant Sci. , vol.13 , pp. 557-565
    • Knizewski, L.1    Ginalski, K.2    Jerzmanowski, A.3
  • 80
    • 0033868768 scopus 로고    scopus 로고
    • The Cytokinin-hypersensitive genes of Arabidopsis negatively regulate the cytokinin-signaling pathway for cell division and chloroplast development
    • Kubo, M., and, Kakimoto, T., (2000) The Cytokinin-hypersensitive genes of Arabidopsis negatively regulate the cytokinin-signaling pathway for cell division and chloroplast development. Plant J. 23, 385-394.
    • (2000) Plant J. , vol.23 , pp. 385-394
    • Kubo, M.1    Kakimoto, T.2
  • 81
    • 79953848233 scopus 로고    scopus 로고
    • The CKH1/EER4 gene encoding a TAF12-like protein negatively regulates cytokinin sensitivity in Arabidopsis thaliana
    • Kubo, M., Furuta, K., Demura, T., Fukuda, H., Liu, Y.G., Shibata, D., and, Kakimoto, T., (2011) The CKH1/EER4 gene encoding a TAF12-like protein negatively regulates cytokinin sensitivity in Arabidopsis thaliana. Plant Cell Physiol. 52, 629-637.
    • (2011) Plant Cell Physiol. , vol.52 , pp. 629-637
    • Kubo, M.1    Furuta, K.2    Demura, T.3    Fukuda, H.4    Liu, Y.G.5    Shibata, D.6    Kakimoto, T.7
  • 82
    • 73149085055 scopus 로고    scopus 로고
    • H2A.Z-containing nucleosomes mediate the thermosensory response in Arabidopsis
    • Kumar, S.V., and, Wigge, P.A., (2010) H2A.Z-containing nucleosomes mediate the thermosensory response in Arabidopsis. Cell, 140, 136-147.
    • (2010) Cell , vol.140 , pp. 136-147
    • Kumar, S.V.1    Wigge, P.A.2
  • 83
    • 34447620116 scopus 로고    scopus 로고
    • Unwinding chromatin for development and growth: A few genes at a time
    • Kwon, C.S., and, Wagner, D., (2007) Unwinding chromatin for development and growth: a few genes at a time. Trends Genet. 23, 403-412.
    • (2007) Trends Genet. , vol.23 , pp. 403-412
    • Kwon, C.S.1    Wagner, D.2
  • 84
    • 17444401034 scopus 로고    scopus 로고
    • WUSCHEL is a primary target for transcriptional regulation by SPLAYED in dynamic control of stem cell fate in Arabidopsis
    • Kwon, C.S., Chen, C., and, Wagner, D., (2005) WUSCHEL is a primary target for transcriptional regulation by SPLAYED in dynamic control of stem cell fate in Arabidopsis. Genes Dev. 19, 992-1003.
    • (2005) Genes Dev. , vol.19 , pp. 992-1003
    • Kwon, C.S.1    Chen, C.2    Wagner, D.3
  • 85
    • 33748762745 scopus 로고    scopus 로고
    • A role for chromatin remodeling in regulation of CUC gene expression in the Arabidopsis cotyledon boundary
    • Kwon, C.S., Hibara, K., Pfluger, J., Bezhani, S., Metha, H., Aida, M., Tasaka, M., and, Wagner, D., (2006) A role for chromatin remodeling in regulation of CUC gene expression in the Arabidopsis cotyledon boundary. Development, 133, 3223-3230.
    • (2006) Development , vol.133 , pp. 3223-3230
    • Kwon, C.S.1    Hibara, K.2    Pfluger, J.3    Bezhani, S.4    Metha, H.5    Aida, M.6    Tasaka, M.7    Wagner, D.8
  • 86
    • 77953129746 scopus 로고    scopus 로고
    • A protein complex required for polymerase v transcripts and RNA- directed DNA methylation in Arabidopsis
    • Law, J.A., Ausin, I., Johnson, L.M., Vashisht, A.A., Zhu, J.K., Wohlschlegel, J.A., and, Jacobsen, S.E., (2010) A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis. Curr. Biol. 20, 951-956.
    • (2010) Curr. Biol. , vol.20 , pp. 951-956
    • Law, J.A.1    Ausin, I.2    Johnson, L.M.3    Vashisht, A.A.4    Zhu, J.K.5    Wohlschlegel, J.A.6    Jacobsen, S.E.7
  • 87
    • 43449127229 scopus 로고    scopus 로고
    • Mutations in the Arabidopsis SWC6 gene, encoding a component of the SWR1 chromatin remodelling complex, accelerate flowering time and alter leaf and flower development
    • Lazaro, A., Gomez-Zambrano, A., Lopez-Gonzalez, L., Pineiro, M., and, Jarillo, J.A., (2008) Mutations in the Arabidopsis SWC6 gene, encoding a component of the SWR1 chromatin remodelling complex, accelerate flowering time and alter leaf and flower development. J. Exp. Bot. 59, 653-666.
    • (2008) J. Exp. Bot. , vol.59 , pp. 653-666
    • Lazaro, A.1    Gomez-Zambrano, A.2    Lopez-Gonzalez, L.3    Pineiro, M.4    Jarillo, J.A.5
  • 88
    • 84924108529 scopus 로고    scopus 로고
    • Reduced seed germination in Arabidopsis over-expressing SWI/SNF2 ATPase genes
    • Leeggangers, H.A., Folta, A., Muras, A., Nap, J.P., and, Mlynarova, L., (2015) Reduced seed germination in Arabidopsis over-expressing SWI/SNF2 ATPase genes. Physiol. Plant. 153, 318-326.
    • (2015) Physiol. Plant. , vol.153 , pp. 318-326
    • Leeggangers, H.A.1    Folta, A.2    Muras, A.3    Nap, J.P.4    Mlynarova, L.5
  • 91
    • 33847070442 scopus 로고    scopus 로고
    • The role of chromatin during transcription
    • Li, B., Carey, M., and, Workman, J.L., (2007) The role of chromatin during transcription. Cell, 128, 707-719.
    • (2007) Cell , vol.128 , pp. 707-719
    • Li, B.1    Carey, M.2    Workman, J.L.3
  • 92
    • 84867577881 scopus 로고    scopus 로고
    • Imitation Switch chromatin remodeling factors and their interacting RINGLET proteins act together in controlling the plant vegetative phase in Arabidopsis
    • Li, G., Zhang, J., Li, J., Yang, Z., Huang, H., and, Xu, L., (2012) Imitation Switch chromatin remodeling factors and their interacting RINGLET proteins act together in controlling the plant vegetative phase in Arabidopsis. Plant J. 72, 261-270.
    • (2012) Plant J. , vol.72 , pp. 261-270
    • Li, G.1    Zhang, J.2    Li, J.3    Yang, Z.4    Huang, H.5    Xu, L.6
  • 93
    • 84900474003 scopus 로고    scopus 로고
    • ISWI proteins participate in the genome-wide nucleosome distribution in Arabidopsis
    • Li, G., Liu, S., Wang, J., He, J., Huang, H., Zhang, Y., and, Xu, L., (2014a) ISWI proteins participate in the genome-wide nucleosome distribution in Arabidopsis. Plant J. 78, 706-714.
    • (2014) Plant J. , vol.78 , pp. 706-714
    • Li, G.1    Liu, S.2    Wang, J.3    He, J.4    Huang, H.5    Zhang, Y.6    Xu, L.7
  • 95
    • 84924386873 scopus 로고    scopus 로고
    • The Arabidopsis SWI2/SNF2 chromatin remodeler BRAHMA regulates polycomb function during vegetative development and directly activates the flowering repressor gene SVP
    • Li, C., Chen, C., Gao, L., et al. (2015) The Arabidopsis SWI2/SNF2 chromatin remodeler BRAHMA regulates polycomb function during vegetative development and directly activates the flowering repressor gene SVP. PLoS Genet. 11, e1004944.
    • (2015) PLoS Genet. , vol.11 , pp. e1004944
    • Li, C.1    Chen, C.2    Gao, L.3
  • 97
    • 0034121176 scopus 로고    scopus 로고
    • A null mutation in a bZIP factor confers ABA-insensitivity in Arabidopsis thaliana
    • Lopez-Molina, L., and, Chua, N.H., (2000) A null mutation in a bZIP factor confers ABA-insensitivity in Arabidopsis thaliana. Plant Cell Physiol. 41, 541-547.
    • (2000) Plant Cell Physiol. , vol.41 , pp. 541-547
    • Lopez-Molina, L.1    Chua, N.H.2
  • 98
    • 0033524939 scopus 로고    scopus 로고
    • Histone octamer transfer by a chromatin-remodeling complex
    • Lorch, Y., Zhang, M., and, Kornberg, R.D., (1999) Histone octamer transfer by a chromatin-remodeling complex. Cell, 96, 389-392.
    • (1999) Cell , vol.96 , pp. 389-392
    • Lorch, Y.1    Zhang, M.2    Kornberg, R.D.3
  • 99
    • 1842411320 scopus 로고    scopus 로고
    • Crystal structure of the nucleosome core particle at 2.8 A resolution
    • Luger, K., Mader, A.W., Richmond, R.K., Sargent, D.F., and, Richmond, T.J., (1997) Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature, 389, 251-260.
    • (1997) Nature , vol.389 , pp. 251-260
    • Luger, K.1    Mader, A.W.2    Richmond, R.K.3    Sargent, D.F.4    Richmond, T.J.5
  • 100
    • 78751536862 scopus 로고    scopus 로고
    • Stepwise histone replacement by SWR1 requires dual activation with histone H2A.Z and canonical nucleosome
    • Luk, E., Ranjan, A., Fitzgerald, P.C., Mizuguchi, G., Huang, Y., Wei, D., and, Wu, C., (2010) Stepwise histone replacement by SWR1 requires dual activation with histone H2A.Z and canonical nucleosome. Cell, 143, 725-736.
    • (2010) Cell , vol.143 , pp. 725-736
    • Luk, E.1    Ranjan, A.2    Fitzgerald, P.C.3    Mizuguchi, G.4    Huang, Y.5    Wei, D.6    Wu, C.7
  • 101
    • 15544369061 scopus 로고    scopus 로고
    • Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly
    • Lusser, A., Urwin, D.L., and, Kadonaga, J.T., (2005) Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly. Nat. Struct. Mol. Biol. 12, 160-166.
    • (2005) Nat. Struct. Mol. Biol. , vol.12 , pp. 160-166
    • Lusser, A.1    Urwin, D.L.2    Kadonaga, J.T.3
  • 102
    • 34247270292 scopus 로고    scopus 로고
    • SEF, a new protein required for flowering repression in Arabidopsis, interacts with PIE1 and ARP6
    • March-Diaz, R., Garcia-Dominguez, M., Florencio, F.J., and, Reyes, J.C., (2007) SEF, a new protein required for flowering repression in Arabidopsis, interacts with PIE1 and ARP6. Plant Physiol. 143, 893-901.
    • (2007) Plant Physiol. , vol.143 , pp. 893-901
    • March-Diaz, R.1    Garcia-Dominguez, M.2    Florencio, F.J.3    Reyes, J.C.4
  • 103
    • 34147158728 scopus 로고    scopus 로고
    • The Chd family of chromatin remodelers
    • Marfella, C.G., and, Imbalzano, A.N., (2007) The Chd family of chromatin remodelers. Mutat. Res. 618, 30-40.
    • (2007) Mutat. Res. , vol.618 , pp. 30-40
    • Marfella, C.G.1    Imbalzano, A.N.2
  • 104
    • 33646130847 scopus 로고    scopus 로고
    • EARLY in SHORT DAYS 1 (ESD1) encodes ACTIN-RELATED PROTEIN 6 (AtARP6), a putative component of chromatin remodelling complexes that positively regulates FLC accumulation in Arabidopsis
    • Martin-Trillo, M., Lazaro, A., Poethig, R.S., Gomez-Mena, C., Pineiro, M.A., Martinez-Zapater, J.M., and, Jarillo, J.A., (2006) EARLY IN SHORT DAYS 1 (ESD1) encodes ACTIN-RELATED PROTEIN 6 (AtARP6), a putative component of chromatin remodelling complexes that positively regulates FLC accumulation in Arabidopsis. Development, 133, 1241-1252.
    • (2006) Development , vol.133 , pp. 1241-1252
    • Martin-Trillo, M.1    Lazaro, A.2    Poethig, R.S.3    Gomez-Mena, C.4    Pineiro, M.A.5    Martinez-Zapater, J.M.6    Jarillo, J.A.7
  • 105
    • 84926435492 scopus 로고    scopus 로고
    • Chromodomain Helicase DNA binding proteins in stem cells and human developmental diseases
    • Micucci, J., Sperry, E.D., and, Martin, D.M., (2015) Chromodomain Helicase DNA binding proteins in stem cells and human developmental diseases. Stem Cells Dev. 24, 917-926.
    • (2015) Stem Cells Dev. , vol.24 , pp. 917-926
    • Micucci, J.1    Sperry, E.D.2    Martin, D.M.3
  • 106
    • 0035837378 scopus 로고    scopus 로고
    • Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
    • Miura, A., Yonebayashi, S., Watanabe, K., Toyama, T., Shimada, H., and, Kakutani, T., (2001) Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis. Nature, 411, 212-214.
    • (2001) Nature , vol.411 , pp. 212-214
    • Miura, A.1    Yonebayashi, S.2    Watanabe, K.3    Toyama, T.4    Shimada, H.5    Kakutani, T.6
  • 107
    • 0348184963 scopus 로고    scopus 로고
    • ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex
    • Mizuguchi, G., Shen, X., Landry, J., Wu, W.H., Sen, S., and, Wu, C., (2004) ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. Science, 303, 343-348.
    • (2004) Science , vol.303 , pp. 343-348
    • Mizuguchi, G.1    Shen, X.2    Landry, J.3    Wu, W.H.4    Sen, S.5    Wu, C.6
  • 108
    • 34548125409 scopus 로고    scopus 로고
    • The SWI/SNF chromatin-remodeling gene AtCHR12 mediates temporary growth arrest in Arabidopsis thaliana upon perceiving environmental stress
    • Mlynarova, L., Nap, J.P., and, Bisseling, T., (2007) The SWI/SNF chromatin-remodeling gene AtCHR12 mediates temporary growth arrest in Arabidopsis thaliana upon perceiving environmental stress. Plant J. 51, 874-885.
    • (2007) Plant J. , vol.51 , pp. 874-885
    • Mlynarova, L.1    Nap, J.P.2    Bisseling, T.3
  • 109
    • 42149098759 scopus 로고    scopus 로고
    • DCHD3, a novel ATP-dependent chromatin remodeler associated with sites of active transcription
    • Murawska, M., Kunert, N., van Vugt, J., Langst, G., Kremmer, E., Logie, C., and, Brehm, A., (2008) dCHD3, a novel ATP-dependent chromatin remodeler associated with sites of active transcription. Mol. Cell. Biol. 28, 2745-2757.
    • (2008) Mol. Cell. Biol. , vol.28 , pp. 2745-2757
    • Murawska, M.1    Kunert, N.2    Van Vugt, J.3    Langst, G.4    Kremmer, E.5    Logie, C.6    Brehm, A.7
  • 110
    • 84881166117 scopus 로고    scopus 로고
    • Mechanisms and functions of ATP-dependent chromatin-remodeling enzymes
    • Narlikar, G.J., Sundaramoorthy, R., and, Owen-Hughes, T., (2013) Mechanisms and functions of ATP-dependent chromatin-remodeling enzymes. Cell, 154, 490-503.
    • (2013) Cell , vol.154 , pp. 490-503
    • Narlikar, G.J.1    Sundaramoorthy, R.2    Owen-Hughes, T.3
  • 111
    • 0038719205 scopus 로고    scopus 로고
    • PIE1, an ISWI family gene, is required for FLC activation and floral repression in Arabidopsis
    • Noh, Y.S., and, Amasino, R.M., (2003) PIE1, an ISWI family gene, is required for FLC activation and floral repression in Arabidopsis. Plant Cell, 15, 1671-1682.
    • (2003) Plant Cell , vol.15 , pp. 1671-1682
    • Noh, Y.S.1    Amasino, R.M.2
  • 112
    • 0030772968 scopus 로고    scopus 로고
    • Cellular differentiation regulated by gibberellin in the Arabidopsis thaliana pickle mutant
    • Ogas, J., Cheng, J.C., Sung, Z.R., and, Somerville, C., (1997) Cellular differentiation regulated by gibberellin in the Arabidopsis thaliana pickle mutant. Science, 277, 91-94.
    • (1997) Science , vol.277 , pp. 91-94
    • Ogas, J.1    Cheng, J.C.2    Sung, Z.R.3    Somerville, C.4
  • 113
    • 0033598804 scopus 로고    scopus 로고
    • PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis
    • Ogas, J., Kaufmann, S., Henderson, J., and, Somerville, C., (1999) PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis. Proc. Natl Acad. Sci. USA, 96, 13839-13844.
    • (1999) Proc. Natl Acad. Sci. USA , vol.96 , pp. 13839-13844
    • Ogas, J.1    Kaufmann, S.2    Henderson, J.3    Somerville, C.4
  • 114
    • 78651510784 scopus 로고    scopus 로고
    • Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity
    • Papamichos-Chronakis, M., Watanabe, S., Rando, O.J., and, Peterson, C.L., (2011) Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity. Cell, 144, 200-213.
    • (2011) Cell , vol.144 , pp. 200-213
    • Papamichos-Chronakis, M.1    Watanabe, S.2    Rando, O.J.3    Peterson, C.L.4
  • 115
    • 79957676934 scopus 로고    scopus 로고
    • Hormone balance and abiotic stress tolerance in crop plants
    • Peleg, Z., and, Blumwald, E., (2011) Hormone balance and abiotic stress tolerance in crop plants. Curr. Opin. Plant Biol. 14, 290-295.
    • (2011) Curr. Opin. Plant Biol. , vol.14 , pp. 290-295
    • Peleg, Z.1    Blumwald, E.2
  • 116
    • 36349030778 scopus 로고    scopus 로고
    • The role of chromatin-remodeling factor PKL in balancing osmotic stress responses during Arabidopsis seed germination
    • Perruc, E., Kinoshita, N., and, Lopez-Molina, L., (2007) The role of chromatin-remodeling factor PKL in balancing osmotic stress responses during Arabidopsis seed germination. Plant J. 52, 927-936.
    • (2007) Plant J. , vol.52 , pp. 927-936
    • Perruc, E.1    Kinoshita, N.2    Lopez-Molina, L.3
  • 117
    • 0033847208 scopus 로고    scopus 로고
    • Octamer transfer and creation of stably remodeled nucleosomes by human SWI-SNF and its isolated ATPases
    • Phelan, M.L., Schnitzler, G.R., and, Kingston, R.E., (2000) Octamer transfer and creation of stably remodeled nucleosomes by human SWI-SNF and its isolated ATPases. Mol. Cell. Biol. 20, 6380-6389.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 6380-6389
    • Phelan, M.L.1    Schnitzler, G.R.2    Kingston, R.E.3
  • 119
    • 44449099142 scopus 로고    scopus 로고
    • ATP-dependent chromatin remodeling enzymes: Two heads are not better, just different
    • Racki, L.R., and, Narlikar, G.J., (2008) ATP-dependent chromatin remodeling enzymes: two heads are not better, just different. Curr. Opin. Genet. Dev. 18, 137-144.
    • (2008) Curr. Opin. Genet. Dev. , vol.18 , pp. 137-144
    • Racki, L.R.1    Narlikar, G.J.2
  • 120
    • 82455219436 scopus 로고    scopus 로고
    • Repressive LTR nucleosome positioning by the BAF complex is required for HIV latency
    • Rafati, H., Parra, M., Hakre, S., Moshkin, Y., Verdin, E., and, Mahmoudi, T., (2011) Repressive LTR nucleosome positioning by the BAF complex is required for HIV latency. PLoS Biol. 9, e1001206.
    • (2011) PLoS Biol. , vol.9 , pp. e1001206
    • Rafati, H.1    Parra, M.2    Hakre, S.3    Moshkin, Y.4    Verdin, E.5    Mahmoudi, T.6
  • 121
    • 84860647928 scopus 로고    scopus 로고
    • NuRD suppresses pluripotency gene expression to promote transcriptional heterogeneity and lineage commitment
    • Reynolds, N., Latos, P., Hynes-Allen, A., et al. (2012a) NuRD suppresses pluripotency gene expression to promote transcriptional heterogeneity and lineage commitment. Cell Stem Cell, 10, 583-594.
    • (2012) Cell Stem Cell , vol.10 , pp. 583-594
    • Reynolds, N.1    Latos, P.2    Hynes-Allen, A.3
  • 123
    • 84872093947 scopus 로고    scopus 로고
    • Transcriptional repressors: Multifaceted regulators of gene expression
    • Reynolds, N., O'Shaughnessy, A., and, Hendrich, B., (2013) Transcriptional repressors: multifaceted regulators of gene expression. Development, 140, 505-512.
    • (2013) Development , vol.140 , pp. 505-512
    • Reynolds, N.1    O'Shaughnessy, A.2    Hendrich, B.3
  • 124
    • 3543134886 scopus 로고    scopus 로고
    • Metabolic profiling of the Arabidopsis pkl mutant reveals selective derepression of embryonic traits
    • Rider, S.D. Jr, Hemm, M.R., Hostetler, H.A., Li, H.C., Chapple, C., and, Ogas, J., (2004) Metabolic profiling of the Arabidopsis pkl mutant reveals selective derepression of embryonic traits. Planta, 219, 489-499.
    • (2004) Planta , vol.219 , pp. 489-499
    • Rider, Jr.S.D.1    Hemm, M.R.2    Hostetler, H.A.3    Li, H.C.4    Chapple, C.5    Ogas, J.6
  • 125
    • 84880951294 scopus 로고    scopus 로고
    • The Arabidopsis SWR1 chromatin-remodeling complex is important for DNA repair, somatic recombination, and meiosis
    • Rosa, M., Von Harder, M., Cigliano, R.A., Schlogelhofer, P., and, Mittelsten Scheid, O., (2013) The Arabidopsis SWR1 chromatin-remodeling complex is important for DNA repair, somatic recombination, and meiosis. Plant Cell, 25, 1990-2001.
    • (2013) Plant Cell , vol.25 , pp. 1990-2001
    • Rosa, M.1    Von Harder, M.2    Cigliano, R.A.3    Schlogelhofer, P.4    Mittelsten Scheid, O.5
  • 126
    • 70449672342 scopus 로고    scopus 로고
    • The stem cell-chromatin connection
    • Sang, Y., Wu, M.F., and, Wagner, D., (2009) The stem cell-chromatin connection. Semin. Cell Dev. Biol. 20, 1143-1148.
    • (2009) Semin. Cell Dev. Biol. , vol.20 , pp. 1143-1148
    • Sang, Y.1    Wu, M.F.2    Wagner, D.3
  • 127
    • 84871947886 scopus 로고    scopus 로고
    • Mutations in two non-canonical Arabidopsis SWI2/SNF2 chromatin remodeling ATPases cause embryogenesis and stem cell maintenance defects
    • Sang, Y., Silva-Ortega, C.O., Wu, S., Yamaguchi, N., Wu, M.F., Pfluger, J., Gillmor, C.S., Gallagher, K.L., and, Wagner, D., (2012) Mutations in two non-canonical Arabidopsis SWI2/SNF2 chromatin remodeling ATPases cause embryogenesis and stem cell maintenance defects. Plant J. 72, 1000-1014.
    • (2012) Plant J. , vol.72 , pp. 1000-1014
    • Sang, Y.1    Silva-Ortega, C.O.2    Wu, S.3    Yamaguchi, N.4    Wu, M.F.5    Pfluger, J.6    Gillmor, C.S.7    Gallagher, K.L.8    Wagner, D.9
  • 128
    • 84883228956 scopus 로고    scopus 로고
    • DELLA-interacting SWI3C core subunit of switch/sucrose nonfermenting chromatin remodeling complex modulates gibberellin responses and hormonal cross talk in Arabidopsis
    • Sarnowska, E.A., Rolicka, A.T., Bucior, E., et al. (2013) DELLA-interacting SWI3C core subunit of switch/sucrose nonfermenting chromatin remodeling complex modulates gibberellin responses and hormonal cross talk in Arabidopsis. Plant Physiol. 163, 305-317.
    • (2013) Plant Physiol. , vol.163 , pp. 305-317
    • Sarnowska, E.A.1    Rolicka, A.T.2    Bucior, E.3
  • 129
    • 0036682145 scopus 로고    scopus 로고
    • AtSWI3B, an Arabidopsis homolog of SWI3, a core subunit of yeast Swi/Snf chromatin remodeling complex, interacts with FCA, a regulator of flowering time
    • Sarnowski, T.J., Swiezewski, S., Pawlikowska, K., Kaczanowski, S., and, Jerzmanowski, A., (2002) AtSWI3B, an Arabidopsis homolog of SWI3, a core subunit of yeast Swi/Snf chromatin remodeling complex, interacts with FCA, a regulator of flowering time. Nucleic Acids Res. 30, 3412-3421.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 3412-3421
    • Sarnowski, T.J.1    Swiezewski, S.2    Pawlikowska, K.3    Kaczanowski, S.4    Jerzmanowski, A.5
  • 131
    • 82255164427 scopus 로고    scopus 로고
    • A new, highly conserved domain in Swi2/Snf2 is required for SWI/SNF remodeling
    • Sen, P., Ghosh, S., Pugh, B.F., and, Bartholomew, B., (2011) A new, highly conserved domain in Swi2/Snf2 is required for SWI/SNF remodeling. Nucleic Acids Res. 39, 9155-9166.
    • (2011) Nucleic Acids Res. , vol.39 , pp. 9155-9166
    • Sen, P.1    Ghosh, S.2    Pugh, B.F.3    Bartholomew, B.4
  • 133
    • 33745351544 scopus 로고    scopus 로고
    • Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination
    • Shaked, H., Avivi-Ragolsky, N., and, Levy, A.A., (2006) Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination. Genetics, 173, 985-994.
    • (2006) Genetics , vol.173 , pp. 985-994
    • Shaked, H.1    Avivi-Ragolsky, N.2    Levy, A.A.3
  • 134
    • 68449093613 scopus 로고    scopus 로고
    • Chromatin remodeling in stem cell maintenance in Arabidopsis thaliana
    • Shen, W.H., and, Xu, L., (2009) Chromatin remodeling in stem cell maintenance in Arabidopsis thaliana. Mol. Plant, 2, 600-609.
    • (2009) Mol. Plant , vol.2 , pp. 600-609
    • Shen, W.H.1    Xu, L.2
  • 135
    • 84936847677 scopus 로고    scopus 로고
    • Chromodomain, Helicase and DNA-binding CHD1 protein, CHR5, are involved in establishing active chromatin state of seed maturation genes
    • Epub ahead of print
    • Shen, Y., Devic, M., Lepiniec, L., and, Zhou, D.X., (2015) Chromodomain, Helicase and DNA-binding CHD1 protein, CHR5, are involved in establishing active chromatin state of seed maturation genes. Plant Biotechnol. J. doi: 10.1111/pbi.12315. [Epub ahead of print].
    • (2015) Plant Biotechnol. J.
    • Shen, Y.1    Devic, M.2    Lepiniec, L.3    Zhou, D.X.4
  • 136
    • 33846798370 scopus 로고    scopus 로고
    • Gene networks involved in drought stress response and tolerance
    • Shinozaki, K., and, Yamaguchi-Shinozaki, K., (2007) Gene networks involved in drought stress response and tolerance. J. Exp. Bot. 58, 221-227.
    • (2007) J. Exp. Bot. , vol.58 , pp. 221-227
    • Shinozaki, K.1    Yamaguchi-Shinozaki, K.2
  • 137
    • 3042763342 scopus 로고    scopus 로고
    • P38 pathway targets SWI-SNF chromatin-remodeling complex to muscle-specific loci
    • Simone, C., Forcales, S.V., Hill, D.A., Imbalzano, A.N., Latella, L., and, Puri, P.L., (2004) p38 pathway targets SWI-SNF chromatin-remodeling complex to muscle-specific loci. Nat. Genet. 36, 738-743.
    • (2004) Nat. Genet. , vol.36 , pp. 738-743
    • Simone, C.1    Forcales, S.V.2    Hill, D.A.3    Imbalzano, A.N.4    Latella, L.5    Puri, P.L.6
  • 138
    • 79953286186 scopus 로고    scopus 로고
    • SnapShot: Chromatin remodeling: CHD
    • Sims, J.K., and, Wade, P.A., (2011) SnapShot: chromatin remodeling: CHD. Cell, 144, 626 -626.e1.
    • (2011) Cell , vol.144 , pp. 626-626e1
    • Sims, J.K.1    Wade, P.A.2
  • 139
    • 84863116642 scopus 로고    scopus 로고
    • Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development
    • Smaczniak, C., Immink, R.G., Muino, J.M., et al. (2012) Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development. Proc. Natl Acad. Sci. USA, 109, 1560-1565.
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 1560-1565
    • Smaczniak, C.1    Immink, R.G.2    Muino, J.M.3
  • 140
    • 34347382532 scopus 로고    scopus 로고
    • An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis
    • Smith, L.M., Pontes, O., Searle, I., Yelina, N., Yousafzai, F.K., Herr, A.J., Pikaard, C.S., and, Baulcombe, D.C., (2007) An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis. Plant Cell, 19, 1507-1521.
    • (2007) Plant Cell , vol.19 , pp. 1507-1521
    • Smith, L.M.1    Pontes, O.2    Searle, I.3    Yelina, N.4    Yousafzai, F.K.5    Herr, A.J.6    Pikaard, C.S.7    Baulcombe, D.C.8
  • 141
    • 33745221438 scopus 로고    scopus 로고
    • Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes
    • Stockdale, C., Flaus, A., Ferreira, H., and, Owen-Hughes, T., (2006) Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes. J Biol. Chem. 281, 16279-16288.
    • (2006) J Biol. Chem. , vol.281 , pp. 16279-16288
    • Stockdale, C.1    Flaus, A.2    Ferreira, H.3    Owen-Hughes, T.4
  • 143
    • 33646268192 scopus 로고    scopus 로고
    • The N-terminal ATPase AT-hook-containing region of the Arabidopsis chromatin-remodeling protein SPLAYED is sufficient for biological activity
    • Su, Y., Kwon, C.S., Bezhani, S., Huvermann, B., Chen, C., Peragine, A., Kennedy, J.F., and, Wagner, D., (2006) The N-terminal ATPase AT-hook-containing region of the Arabidopsis chromatin-remodeling protein SPLAYED is sufficient for biological activity. Plant J. 46, 685-699.
    • (2006) Plant J. , vol.46 , pp. 685-699
    • Su, Y.1    Kwon, C.S.2    Bezhani, S.3    Huvermann, B.4    Chen, C.5    Peragine, A.6    Kennedy, J.F.7    Wagner, D.8
  • 144
    • 84904051114 scopus 로고    scopus 로고
    • Chromatin dynamics: Interplay between remodeling enzymes and histone modifications
    • Swygert, S.G., and, Peterson, C.L., (2014) Chromatin dynamics: interplay between remodeling enzymes and histone modifications. Biochim. Biophys. Acta, 1839, 728-736.
    • (2014) Biochim. Biophys. Acta , vol.1839 , pp. 728-736
    • Swygert, S.G.1    Peterson, C.L.2
  • 145
    • 66649127942 scopus 로고    scopus 로고
    • Directed transdifferentiation of mouse mesoderm to heart tissue by defined factors
    • Takeuchi, J.K., and, Bruneau, B.G., (2009) Directed transdifferentiation of mouse mesoderm to heart tissue by defined factors. Nature, 459, 708-711.
    • (2009) Nature , vol.459 , pp. 708-711
    • Takeuchi, J.K.1    Bruneau, B.G.2
  • 146
    • 0026580006 scopus 로고
    • Brahma: A regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2
    • Tamkun, J.W., Deuring, R., Scott, M.P., Kissinger, M., Pattatucci, A.M., Kaufman, T.C., and, Kennison, J.A., (1992) brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2. Cell, 68, 561-572.
    • (1992) Cell , vol.68 , pp. 561-572
    • Tamkun, J.W.1    Deuring, R.2    Scott, M.P.3    Kissinger, M.4    Pattatucci, A.M.5    Kaufman, T.C.6    Kennison, J.A.7
  • 147
    • 51549114313 scopus 로고    scopus 로고
    • The Arabidopsis BRAHMA chromatin-remodeling ATPase is involved in repression of seed maturation genes in leaves
    • Tang, X., Hou, A., Babu, M., et al. (2008) The Arabidopsis BRAHMA chromatin-remodeling ATPase is involved in repression of seed maturation genes in leaves. Plant Physiol. 147, 1143-1157.
    • (2008) Plant Physiol. , vol.147 , pp. 1143-1157
    • Tang, X.1    Hou, A.2    Babu, M.3
  • 148
    • 84879312591 scopus 로고    scopus 로고
    • Swi/Snf chromatin remodeling/tumor suppressor complex establishes nucleosome occupancy at target promoters
    • Tolstorukov, M.Y., Sansam, C.G., Lu, P., et al. (2013) Swi/Snf chromatin remodeling/tumor suppressor complex establishes nucleosome occupancy at target promoters. Proc. Natl Acad. Sci. USA, 110, 10165-10170.
    • (2013) Proc. Natl Acad. Sci. USA , vol.110 , pp. 10165-10170
    • Tolstorukov, M.Y.1    Sansam, C.G.2    Lu, P.3
  • 149
    • 0032578762 scopus 로고    scopus 로고
    • Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex
    • Tong, J.K., Hassig, C.A., Schnitzler, G.R., Kingston, R.E., and, Schreiber, S.L., (1998) Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex. Nature, 395, 917-921.
    • (1998) Nature , vol.395 , pp. 917-921
    • Tong, J.K.1    Hassig, C.A.2    Schnitzler, G.R.3    Kingston, R.E.4    Schreiber, S.L.5
  • 150
    • 84882655459 scopus 로고    scopus 로고
    • ATP-dependent chromatin assembly is functionally distinct from chromatin remodeling
    • Torigoe, S.E., Patel, A., Khuong, M.T., Bowman, G.D., and, Kadonaga, J.T., (2013) ATP-dependent chromatin assembly is functionally distinct from chromatin remodeling. eLife, 2, e00863.
    • (2013) ELife , vol.2 , pp. e00863
    • Torigoe, S.E.1    Patel, A.2    Khuong, M.T.3    Bowman, G.D.4    Kadonaga, J.T.5
  • 151
    • 41649120828 scopus 로고    scopus 로고
    • The BRG1 transcriptional coregulator
    • Trotter, K.W., and, Archer, T.K., (2008) The BRG1 transcriptional coregulator. Nucl. Recept. Signal. 6, e004. doi: 10.1621/nrs.06004.
    • (2008) Nucl. Recept. Signal. , vol.6 , pp. e004
    • Trotter, K.W.1    Archer, T.K.2
  • 153
    • 0036056999 scopus 로고    scopus 로고
    • The in vivo functions of ATP-dependent chromatin-remodelling factors
    • Tsukiyama, T., (2002) The in vivo functions of ATP-dependent chromatin-remodelling factors. Nat. Rev. Mol. Cell Biol. 3, 422-429.
    • (2002) Nat. Rev. Mol. Cell Biol. , vol.3 , pp. 422-429
    • Tsukiyama, T.1
  • 154
    • 0031009397 scopus 로고    scopus 로고
    • Chromatin remodeling and transcription
    • Tsukiyama, T., and, Wu, C., (1997) Chromatin remodeling and transcription. Curr. Opin. Genet. Dev. 7, 182-191.
    • (1997) Curr. Opin. Genet. Dev. , vol.7 , pp. 182-191
    • Tsukiyama, T.1    Wu, C.2
  • 156
    • 84896899026 scopus 로고    scopus 로고
    • ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development
    • Vercruyssen, L., Verkest, A., Gonzalez, N., et al. (2014) ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development. Plant Cell, 26, 210-229.
    • (2014) Plant Cell , vol.26 , pp. 210-229
    • Vercruyssen, L.1    Verkest, A.2    Gonzalez, N.3
  • 157
    • 0032845039 scopus 로고    scopus 로고
    • Mi-2 complex couples DNA methylation to chromatin remodelling and histone deacetylation
    • Wade, P.A., Gegonne, A., Jones, P.L., Ballestar, E., Aubry, F., and, Wolffe, A.P., (1999) Mi-2 complex couples DNA methylation to chromatin remodelling and histone deacetylation. Nat. Genet. 23, 62-66.
    • (1999) Nat. Genet. , vol.23 , pp. 62-66
    • Wade, P.A.1    Gegonne, A.2    Jones, P.L.3    Ballestar, E.4    Aubry, F.5    Wolffe, A.P.6
  • 158
    • 0037296679 scopus 로고    scopus 로고
    • Chromatin regulation of plant development
    • Wagner, D., (2003) Chromatin regulation of plant development. Curr. Opin. Plant Biol. 6, 20-28.
    • (2003) Curr. Opin. Plant Biol. , vol.6 , pp. 20-28
    • Wagner, D.1
  • 159
    • 0037154003 scopus 로고    scopus 로고
    • SPLAYED, a novel SWI/SNF ATPase homolog, controls reproductive development in Arabidopsis
    • Wagner, D., and, Meyerowitz, E.M., (2002) SPLAYED, a novel SWI/SNF ATPase homolog, controls reproductive development in Arabidopsis. Curr. Biol. 12, 85-94.
    • (2002) Curr. Biol. , vol.12 , pp. 85-94
    • Wagner, D.1    Meyerowitz, E.M.2
  • 161
    • 0035875298 scopus 로고    scopus 로고
    • Mi2, an auto-antigen for dermatomyositis, is an ATP-dependent nucleosome remodeling factor
    • Wang, H.B., and, Zhang, Y., (2001) Mi2, an auto-antigen for dermatomyositis, is an ATP-dependent nucleosome remodeling factor. Nucleic Acids Res. 29, 2517-2521.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2517-2521
    • Wang, H.B.1    Zhang, Y.2
  • 162
    • 84872798187 scopus 로고    scopus 로고
    • Phosphorylation and recruitment of BAF60c in chromatin remodeling for lipogenesis in response to insulin
    • Wang, Y., Wong, R.H., Tang, T., Hudak, C.S., Yang, D., Duncan, R.E., and, Sul, H.S., (2013) Phosphorylation and recruitment of BAF60c in chromatin remodeling for lipogenesis in response to insulin. Mol. Cell, 49, 283-297.
    • (2013) Mol. Cell , vol.49 , pp. 283-297
    • Wang, Y.1    Wong, R.H.2    Tang, T.3    Hudak, C.S.4    Yang, D.5    Duncan, R.E.6    Sul, H.S.7
  • 164
    • 55449131096 scopus 로고    scopus 로고
    • Noncoding transcription by RNA polymerase Pol IVb/Pol v mediates transcriptional silencing of overlapping and adjacent genes
    • Wierzbicki, A.T., Haag, J.R., and, Pikaard, C.S., (2008) Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes. Cell, 135, 635-648.
    • (2008) Cell , vol.135 , pp. 635-648
    • Wierzbicki, A.T.1    Haag, J.R.2    Pikaard, C.S.3
  • 165
    • 0031707751 scopus 로고    scopus 로고
    • Alteration of nucleosome structure as a mechanism of transcriptional regulation
    • Workman, J.L., and, Kingston, R.E., (1998) Alteration of nucleosome structure as a mechanism of transcriptional regulation. Annu. Rev. Biochem. 67, 545-579.
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 545-579
    • Workman, J.L.1    Kingston, R.E.2
  • 166
    • 28544442465 scopus 로고    scopus 로고
    • Swc2 is a widely conserved H2AZ-binding module essential for ATP-dependent histone exchange
    • Wu, W.H., Alami, S., Luk, E., Wu, C.H., Sen, S., Mizuguchi, G., Wei, D., and, Wu, C., (2005) Swc2 is a widely conserved H2AZ-binding module essential for ATP-dependent histone exchange. Nat. Struct. Mol. Biol. 12, 1064-1071.
    • (2005) Nat. Struct. Mol. Biol. , vol.12 , pp. 1064-1071
    • Wu, W.H.1    Alami, S.2    Luk, E.3    Wu, C.H.4    Sen, S.5    Mizuguchi, G.6    Wei, D.7    Wu, C.8
  • 167
    • 84863263053 scopus 로고    scopus 로고
    • SWI2/SNF2 chromatin remodeling ATPases overcome polycomb repression and control floral organ identity with the LEAFY and SEPALLATA3 transcription factors
    • Wu, M.F., Sang, Y., Bezhani, S., Yamaguchi, N., Han, S.K., Li, Z., Su, Y., Slewinski, T.L., and, Wagner, D., (2012) SWI2/SNF2 chromatin remodeling ATPases overcome polycomb repression and control floral organ identity with the LEAFY and SEPALLATA3 transcription factors. Proc. Natl Acad. Sci. USA, 109, 3576-3581.
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 3576-3581
    • Wu, M.F.1    Sang, Y.2    Bezhani, S.3    Yamaguchi, N.4    Han, S.K.5    Li, Z.6    Su, Y.7    Slewinski, T.L.8    Wagner, D.9
  • 168
    • 84908179266 scopus 로고    scopus 로고
    • BRG1, the ATPase subunit of SWI/SNF chromatin remodeling complex, interacts with HDAC2 to modulate telomerase expression in human cancer cells
    • Wu, S., Ge, Y., Huang, L., Liu, H., Xue, Y., and, Zhao, Y., (2014) BRG1, the ATPase subunit of SWI/SNF chromatin remodeling complex, interacts with HDAC2 to modulate telomerase expression in human cancer cells. Cell Cycle, 13, 2869-2878.
    • (2014) Cell Cycle , vol.13 , pp. 2869-2878
    • Wu, S.1    Ge, Y.2    Huang, L.3    Liu, H.4    Xue, Y.5    Zhao, Y.6
  • 169
    • 33745839365 scopus 로고    scopus 로고
    • A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
    • Wysocka, J., Swigut, T., Xiao, H., et al. (2006) A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling. Nature, 442, 86-90.
    • (2006) Nature , vol.442 , pp. 86-90
    • Wysocka, J.1    Swigut, T.2    Xiao, H.3
  • 170
    • 0032252209 scopus 로고    scopus 로고
    • NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities
    • Xue, Y., Wong, J., Moreno, G.T., Young, M.K., Cote, J., and, Wang, W., (1998) NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities. Mol. Cell, 2, 851-861.
    • (1998) Mol. Cell , vol.2 , pp. 851-861
    • Xue, Y.1    Wong, J.2    Moreno, G.T.3    Young, M.K.4    Cote, J.5    Wang, W.6
  • 171
    • 84862643713 scopus 로고    scopus 로고
    • Genome-wide nucleosome specificity and directionality of chromatin remodelers
    • Yen, K., Vinayachandran, V., Batta, K., Koerber, R.T., and, Pugh, B.F., (2012) Genome-wide nucleosome specificity and directionality of chromatin remodelers. Cell, 149, 1461-1473.
    • (2012) Cell , vol.149 , pp. 1461-1473
    • Yen, K.1    Vinayachandran, V.2    Batta, K.3    Koerber, R.T.4    Pugh, B.F.5
  • 172
    • 67949083572 scopus 로고    scopus 로고
    • MicroRNA-mediated switching of chromatin-remodelling complexes in neural development
    • Yoo, A.S., Staahl, B.T., Chen, L., and, Crabtree, G.R., (2009) MicroRNA-mediated switching of chromatin-remodelling complexes in neural development. Nature, 460, 642-646.
    • (2009) Nature , vol.460 , pp. 642-646
    • Yoo, A.S.1    Staahl, B.T.2    Chen, L.3    Crabtree, G.R.4
  • 175
    • 84872509787 scopus 로고    scopus 로고
    • Olig2 targets chromatin remodelers to enhancers to initiate oligodendrocyte differentiation
    • Yu, Y., Chen, Y., Kim, B., et al. (2013) Olig2 targets chromatin remodelers to enhancers to initiate oligodendrocyte differentiation. Cell, 152, 248-261.
    • (2013) Cell , vol.152 , pp. 248-261
    • Yu, Y.1    Chen, Y.2    Kim, B.3
  • 176
    • 84875741680 scopus 로고    scopus 로고
    • The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
    • Zemach, A., Kim, M.Y., Hsieh, P.H., Coleman-Derr, D., Eshed-Williams, L., Thao, K., Harmer, S.L., and, Zilberman, D., (2013) The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. Cell, 153, 193-205.
    • (2013) Cell , vol.153 , pp. 193-205
    • Zemach, A.1    Kim, M.Y.2    Hsieh, P.H.3    Coleman-Derr, D.4    Eshed-Williams, L.5    Thao, K.6    Harmer, S.L.7    Zilberman, D.8
  • 177
    • 37249000845 scopus 로고    scopus 로고
    • Global analysis of della direct targets in early gibberellin signaling in Arabidopsis
    • Zentella, R., Zhang, Z.L., Park, M., et al. (2007) Global analysis of della direct targets in early gibberellin signaling in Arabidopsis. Plant Cell, 19, 3037-3057.
    • (2007) Plant Cell , vol.19 , pp. 3037-3057
    • Zentella, R.1    Zhang, Z.L.2    Park, M.3
  • 178
    • 0032538293 scopus 로고    scopus 로고
    • The dermatomyositis-specific autoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities
    • Zhang, Y., LeRoy, G., Seelig, H.P., Lane, W.S., and, Reinberg, D., (1998) The dermatomyositis-specific autoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities. Cell, 95, 279-289.
    • (1998) Cell , vol.95 , pp. 279-289
    • Zhang, Y.1    Leroy, G.2    Seelig, H.P.3    Lane, W.S.4    Reinberg, D.5
  • 179
    • 0033180082 scopus 로고    scopus 로고
    • Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation
    • Zhang, Y., Ng, H.H., Erdjument-Bromage, H., Tempst, P., Bird, A., and, Reinberg, D., (1999) Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation. Genes Dev. 13, 1924-1935.
    • (1999) Genes Dev. , vol.13 , pp. 1924-1935
    • Zhang, Y.1    Ng, H.H.2    Erdjument-Bromage, H.3    Tempst, P.4    Bird, A.5    Reinberg, D.6
  • 180
    • 53049109232 scopus 로고    scopus 로고
    • The CHD3 remodeler PICKLE promotes trimethylation of histone H3 lysine 27
    • Zhang, H., Rider, S.D. Jr, Henderson, J.T., et al. (2008) The CHD3 remodeler PICKLE promotes trimethylation of histone H3 lysine 27. J Biol. Chem. 283, 22637-22648.
    • (2008) J Biol. Chem. , vol.283 , pp. 22637-22648
    • Zhang, H.1    Rider, Jr.S.D.2    Henderson, J.T.3
  • 181
    • 84860573037 scopus 로고    scopus 로고
    • The CHD3 remodeler PICKLE associates with genes enriched for trimethylation of histone H3 lysine 27
    • Zhang, H., Bishop, B., Ringenberg, W., Muir, W.M., and, Ogas, J., (2012) The CHD3 remodeler PICKLE associates with genes enriched for trimethylation of histone H3 lysine 27. Plant Physiol. 159, 418-432.
    • (2012) Plant Physiol. , vol.159 , pp. 418-432
    • Zhang, H.1    Bishop, B.2    Ringenberg, W.3    Muir, W.M.4    Ogas, J.5
  • 182
    • 84877866795 scopus 로고    scopus 로고
    • DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV
    • Zhang, H., Ma, Z.Y., Zeng, L., et al. (2013) DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV. Proc. Natl Acad. Sci. USA, 110, 8290-8295.
    • (2013) Proc. Natl Acad. Sci. USA , vol.110 , pp. 8290-8295
    • Zhang, H.1    Ma, Z.Y.2    Zeng, L.3
  • 183
    • 84905017807 scopus 로고    scopus 로고
    • The chromatin-remodeling factor PICKLE integrates brassinosteroid and gibberellin signaling during skotomorphogenic growth in Arabidopsis
    • Zhang, D., Jing, Y., Jiang, Z., and, Lin, R., (2014) The chromatin-remodeling factor PICKLE integrates brassinosteroid and gibberellin signaling during skotomorphogenic growth in Arabidopsis. Plant Cell, 26, 2472-2485.
    • (2014) Plant Cell , vol.26 , pp. 2472-2485
    • Zhang, D.1    Jing, Y.2    Jiang, Z.3    Lin, R.4
  • 184
    • 84926354873 scopus 로고    scopus 로고
    • Arabidopsis BREVIPEDICELLUS interacts with the SWI2/SNF2 chromatin remodeling ATPase BRAHMA to regulate KNAT2 and KNAT6 expression in control of inflorescence architecture
    • Zhao, M., Yang, S., Chen, C.Y., Li, C., Shan, W., Lu, W., Cui, Y., Liu, X., and, Wu, K., (2015) Arabidopsis BREVIPEDICELLUS interacts with the SWI2/SNF2 chromatin remodeling ATPase BRAHMA to regulate KNAT2 and KNAT6 expression in control of inflorescence architecture. PLoS Genet. 11, e1005125.
    • (2015) PLoS Genet. , vol.11 , pp. e1005125
    • Zhao, M.1    Yang, S.2    Chen, C.Y.3    Li, C.4    Shan, W.5    Lu, W.6    Cui, Y.7    Liu, X.8    Wu, K.9
  • 185
    • 84866117758 scopus 로고    scopus 로고
    • DDR complex facilitates global association of RNA pvolymerase v to promoters and evolutionarily young transposons
    • Zhong, X., Hale, C.J., Law, J.A., Johnson, L.M., Feng, S., Tu, A., and, Jacobsen, S.E., (2012) DDR complex facilitates global association of RNA pvolymerase V to promoters and evolutionarily young transposons. Nat. Struct. Mol. Biol. 19, 870-875.
    • (2012) Nat. Struct. Mol. Biol. , vol.19 , pp. 870-875
    • Zhong, X.1    Hale, C.J.2    Law, J.A.3    Johnson, L.M.4    Feng, S.5    Tu, A.6    Jacobsen, S.E.7
  • 186
    • 84872787042 scopus 로고    scopus 로고
    • A SWI/SNF chromatin-remodeling complex acts in noncoding RNA-mediated transcriptional silencing
    • Zhu, Y., Rowley, M.J., Bohmdorfer, G., and, Wierzbicki, A.T., (2013) A SWI/SNF chromatin-remodeling complex acts in noncoding RNA-mediated transcriptional silencing. Mol. Cell, 49, 298-309.
    • (2013) Mol. Cell , vol.49 , pp. 298-309
    • Zhu, Y.1    Rowley, M.J.2    Bohmdorfer, G.3    Wierzbicki, A.T.4


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