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Volumn 11, Issue 5, 2014, Pages 443-456

Small regulatory RNAs from low-GC Gram-positive bacteria

Author keywords

Bacillus subtilis; Base pairing sRNA; Low GC Gram positive bacteria; Small regulatory RNA; Streptococcus pneumoniae

Indexed keywords

FERRIC UPTAKE REGULATOR; GLUTAMATE SYNTHASE; RNA; SMALL REGULATORY RNA; UNCLASSIFIED DRUG; BACTERIAL RNA; COMPLEMENTARY RNA; RNA BINDING PROTEIN; SMALL UNTRANSLATED RNA;

EID: 84906355091     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.28036     Document Type: Review
Times cited : (64)

References (110)
  • 1
    • 0036926113 scopus 로고    scopus 로고
    • Antisense RNAs in plasmids: Control of replication and maintenance
    • PMID:12460531
    • Brantl S. Antisense RNAs in plasmids: control of replication and maintenance. Plasmid 2002; 48:165-73; PMID:12460531; http://dx.doi.org/10.1016/ S0147-619X(02)00108-7
    • (2002) Plasmid , vol.48 , pp. 165-173
    • Brantl, S.1
  • 2
    • 70350159135 scopus 로고    scopus 로고
    • The transcriptionally active regions in the genome of Bacillus subtilis
    • PMID:19682248
    • Rasmussen S, Nielsen HB, Jarmer H. The transcriptionally active regions in the genome of Bacillus subtilis. Mol Microbiol 2009; 73:1043-57; PMID:19682248; http://dx.doi.org/10.1111/j.1365-2958.2009.06830.x
    • (2009) Mol Microbiol , vol.73 , pp. 1043-1057
    • Rasmussen, S.1    Nielsen, H.B.2    Jarmer, H.3
  • 3
    • 78049392640 scopus 로고    scopus 로고
    • Identification of regulatory RNAs in Bacillus subtilis
    • PMID:20525796
    • Irnov I, Sharma CM, Vogel J, Winkler WC. Identification of regulatory RNAs in Bacillus subtilis. Nucleic Acids Res 2010; 38:6637-51; PMID:20525796; http://dx.doi.org/10.1093/nar/gkq454
    • (2010) Nucleic Acids Res , vol.38 , pp. 6637-6651
    • Irnov, I.1    Sharma, C.M.2    Vogel, J.3    Winkler, W.C.4
  • 4
    • 84884737727 scopus 로고    scopus 로고
    • RNA-Seq of Bacillus licheniformis: Active regulatory RNA features expressed within a productive fermentation
    • PMID:24079885
    • Wiegand S, Dietrich S, Hertel R, Bongaerts J, Evers S, Volland S, Daniel R, Liesegang H. RNA-Seq of Bacillus licheniformis : active regulatory RNA features expressed within a productive fermentation. BMC Genomics 2013; 14:667; PMID:24079885; http://dx.doi.org/10.1186/1471-2164-14-667
    • (2013) BMC Genomics , vol.14 , pp. 667
    • Wiegand, S.1    Dietrich, S.2    Hertel, R.3    Bongaerts, J.4    Evers, S.5    Volland, S.6    Daniel, R.7    Liesegang, H.8
  • 5
    • 79954609527 scopus 로고    scopus 로고
    • A simple and efficient method to search for selected primary transcripts: Non-coding and antisense RNAs in the human pathogen Enterococcus faecalis
    • PMID:21266481
    • Fouquier d'Hérouel A, Wessner F, Halpern D, Ly-Vu J, Kennedy SP, Serror P, Aurell E, Repoila F. A simple and efficient method to search for selected primary transcripts: non-coding and antisense RNAs in the human pathogen Enterococcus faecalis. Nucleic Acids Res 2011; 39:e46; PMID:21266481; http://dx.doi.org/10.1093/nar/gkr012
    • (2011) Nucleic Acids Res , vol.39
    • Fouquier D'Hérouel, A.1    Wessner, F.2    Halpern, D.3    Ly-Vu, J.4    Kennedy, S.P.5    Serror, P.6    Aurell, E.7    Repoila, F.8
  • 8
    • 84885169552 scopus 로고    scopus 로고
    • RNA-seq-based comparative transcriptome analysis of the syngasutilizing bacterium Clostridium ljungdahlii DSM 13528 grown autotrophically and heterotrophically
    • PMID:24056499
    • Tan Y, Liu J, Chen X, Zheng H, Li F. RNA-seq-based comparative transcriptome analysis of the syngasutilizing bacterium Clostridium ljungdahlii DSM 13528 grown autotrophically and heterotrophically. Mol Biosyst 2013; 9:2775-84; PMID:24056499; http://dx.doi.org/10.1039/c3mb70232d
    • (2013) Mol Biosyst , vol.9 , pp. 2775-2784
    • Tan, Y.1    Liu, J.2    Chen, X.3    Zheng, H.4    Li, F.5
  • 9
    • 84888800671 scopus 로고    scopus 로고
    • The Clostridium small RNome that responds to stress: The paradigm and importance of toxic metabolite stress in C. acetobutylicum
    • PMID:24299206
    • Venkataramanan KP, Jones SW, McCormick KP, Kunjeti SG, Ralston MT, Meyers BC, Papoutsakis ET. The Clostridium small RNome that responds to stress: the paradigm and importance of toxic metabolite stress in C. acetobutylicum. BMC Genomics 2013; 14:849; PMID:24299206; http://dx.doi.org/10.1186/1471-2164-14-849
    • (2013) BMC Genomics , vol.14 , pp. 849
    • Venkataramanan, K.P.1    Jones, S.W.2    McCormick, K.P.3    Kunjeti, S.G.4    Ralston, M.T.5    Meyers, B.C.6    Papoutsakis, E.T.7
  • 10
    • 61749088917 scopus 로고    scopus 로고
    • Bacterial chromosome-encoded small regulatory RNAs
    • PMID:19207102
    • Brantl S. Bacterial chromosome-encoded small regulatory RNAs. Future Microbiol 2009; 4:85-103; PMID:19207102; http://dx.doi.org/10.2217/17460913.4.1. 85
    • (2009) Future Microbiol , vol.4 , pp. 85-103
    • Brantl, S.1
  • 11
    • 34247567492 scopus 로고    scopus 로고
    • An antisense RNA inhibits translation by competing with standby ribosomes
    • PMID:17499044
    • Darfeuille F, Unoson C, Vogel J, Wagner EG. An antisense RNA inhibits translation by competing with standby ribosomes. Mol Cell 2007; 26:381-92; PMID:17499044; http://dx.doi.org/10.1016/j.molcel.2007.04.003
    • (2007) Mol Cell , vol.26 , pp. 381-392
    • Darfeuille, F.1    Unoson, C.2    Vogel, J.3    Wagner, E.G.4
  • 13
    • 84864345937 scopus 로고    scopus 로고
    • Acting antisense: Plasmid- and chromosome-encoded sRNAs from Gram-positive bacteria
    • PMID:22827307
    • Brantl S. Acting antisense: plasmid- and chromosome-encoded sRNAs from Gram-positive bacteria. Future Microbiol 2012; 7:853-71; PMID:22827307; http://dx.doi.org/10.2217/fmb.12.59
    • (2012) Future Microbiol , vol.7 , pp. 853-871
    • Brantl, S.1
  • 14
    • 73849103559 scopus 로고    scopus 로고
    • An overview of RNAs with regulatory functions in gram-positive bacteria
    • PMID:19859665
    • Romby P, Charpentier E. An overview of RNAs with regulatory functions in gram-positive bacteria. Cell Mol Life Sci 2010; 67:217-37; PMID:19859665; http://dx.doi.org/10.1007/s00018-009-0162-8
    • (2010) Cell Mol Life Sci , vol.67 , pp. 217-237
    • Romby, P.1    Charpentier, E.2
  • 15
    • 26244461596 scopus 로고    scopus 로고
    • Implication of CcpN in the regulation of a novel untranslated RNA (SR1) in Bacillus subtilis
    • PMID:16164558
    • Licht A, Preis S, Brantl S. Implication of CcpN in the regulation of a novel untranslated RNA (SR1) in Bacillus subtilis. Mol Microbiol 2005; 58:189-206; PMID:16164558; http://dx.doi.org/10.1111/j.1365-2958.2005.04810.x
    • (2005) Mol Microbiol , vol.58 , pp. 189-206
    • Licht, A.1    Preis, S.2    Brantl, S.3
  • 16
    • 50149103524 scopus 로고    scopus 로고
    • The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins
    • PMID:18697947
    • Gaballa A, Antelmann H, Aguilar C, Khakh S-K, Song K-B, Smaldone GT, Helmann JD. The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins. Proc Natl Acad Sci U S A 2008; 105:11927-32; PMID:18697947; http://dx.doi.org/10.1073/pnas.0711752105
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 11927-11932
    • Gaballa, A.1    Antelmann, H.2    Aguilar, C.3    Khakh, S.-K.4    Song, K.-B.5    Smaldone, G.T.6    Helmann, J.D.7
  • 18
    • 0029113833 scopus 로고
    • Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIII
    • PMID:7556100
    • Morfeldt E, Taylor D, von Gabain A, Arvidson S. Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIII. EMBO J 1995; 14:4569-77; PMID:7556100
    • (1995) EMBO J , vol.14 , pp. 4569-4577
    • Morfeldt, E.1    Taylor, D.2    Von Gabain, A.3    Arvidson, S.4
  • 19
    • 84876838907 scopus 로고    scopus 로고
    • Mobile genetic element SCCmec-encoded psm-mec RNA suppresses translation of agrA and attenuates MRSA virulence
    • PMID:23592990
    • Kaito C, Saito Y, Ikuo M, Omae Y, Mao H, Nagano G, Fujiyuki T, Numata S, Han X, Obata K, et al. Mobile genetic element SCCmec-encoded psm-mec RNA suppresses translation of agrA and attenuates MRSA virulence. PLoS Pathog 2013; 9:e1003269; PMID:23592990; http://dx.doi.org/10.1371/journal.ppat.1003269
    • (2013) PLoS Pathog , vol.9
    • Kaito, C.1    Saito, Y.2    Ikuo, M.3    Omae, Y.4    Mao, H.5    Nagano, G.6    Fujiyuki, T.7    Numata, S.8    Han, X.9    Obata, K.10
  • 21
    • 77952157242 scopus 로고    scopus 로고
    • A dual-function sRNA from B. subtilis: SR1 acts as a peptide encoding mRNA on the gapA operon
    • PMID:20444087
    • Gimpel M, Heidrich N, Mäder U, Krügel H, Brantl S. A dual-function sRNA from B. subtilis : SR1 acts as a peptide encoding mRNA on the gapA operon. Mol Microbiol 2010; 76:990-1009; PMID:20444087; http://dx.doi.org/10.1111/j.1365-2958.2010.07158.x
    • (2010) Mol Microbiol , vol.76 , pp. 990-1009
    • Gimpel, M.1    Heidrich, N.2    Mäder, U.3    Krügel, H.4    Brantl, S.5
  • 22
    • 0036194029 scopus 로고    scopus 로고
    • Clostridial VirR/VirS regulon involves a regulatory RNA molecule for expression of toxins
    • PMID:11849553
    • Shimizu T, Yaguchi H, Ohtani K, Banu S, Hayashi H. Clostridial VirR/VirS regulon involves a regulatory RNA molecule for expression of toxins. Mol Microbiol 2002; 43:257-65; PMID:11849553; http://dx.doi.org/10.1046/j.1365-2958. 2002.02743.x
    • (2002) Mol Microbiol , vol.43 , pp. 257-265
    • Shimizu, T.1    Yaguchi, H.2    Ohtani, K.3    Banu, S.4    Hayashi, H.5
  • 23
    • 36549029160 scopus 로고    scopus 로고
    • RivR and the small RNA RivX: The missing links between the CovR regulatory cascade and the Mga regulon
    • PMID:18005100
    • Roberts SA, Scott JR. RivR and the small RNA RivX: the missing links between the CovR regulatory cascade and the Mga regulon. Mol Microbiol 2007; 66:1506-22; PMID:18005100
    • (2007) Mol Microbiol , vol.66 , pp. 1506-1522
    • Roberts, S.A.1    Scott, J.R.2
  • 24
    • 84866623270 scopus 로고    scopus 로고
    • An effort to make sense of antisense transcription in bacteria
    • PMID:22858676
    • Lasa I, Toledo-Arana A, Gingeras TR. An effort to make sense of antisense transcription in bacteria. RNA Biol 2012; 9:1039-44; PMID:22858676; http://dx.doi.org/10.4161/rna.21167
    • (2012) RNA Biol , vol.9 , pp. 1039-1044
    • Lasa, I.1    Toledo-Arana, A.2    Gingeras, T.R.3
  • 25
    • 84861412664 scopus 로고    scopus 로고
    • A global investigation of the Bacillus subtilis iron-sparing response identifies major changes in metabolism
    • PMID:22389480
    • Smaldone GT, Revelles O, Gaballa A, Sauer U, Antelmann H, Helmann JD. A global investigation of the Bacillus subtilis iron-sparing response identifies major changes in metabolism. J Bacteriol 2012; 194:2594-605; PMID:22389480; http://dx.doi.org/10.1128/JB.05990-11
    • (2012) J Bacteriol , vol.194 , pp. 2594-2605
    • Smaldone, G.T.1    Revelles, O.2    Gaballa, A.3    Sauer, U.4    Antelmann, H.5    Helmann, J.D.6
  • 26
    • 84861368192 scopus 로고    scopus 로고
    • The FsrA sRNA and FbpB protein mediate the iron-dependent induction of the Bacillus subtilis lutABC iron-sulfur-containing oxidases
    • PMID:22427629
    • Smaldone GT, Antelmann H, Gaballa A, Helmann JD. The FsrA sRNA and FbpB protein mediate the iron-dependent induction of the Bacillus subtilis lutABC iron-sulfur-containing oxidases. J Bacteriol 2012; 194:2586-93; PMID:22427629; http://dx.doi.org/10.1128/JB.05567-11
    • (2012) J Bacteriol , vol.194 , pp. 2586-2593
    • Smaldone, G.T.1    Antelmann, H.2    Gaballa, A.3    Helmann, J.D.4
  • 27
    • 68949130109 scopus 로고    scopus 로고
    • CodY activates transcription of a small RNA in Bacillus subtilis
    • PMID:19542274
    • Preis H, Eckart RA, Gudipati RK, Heidrich N, Brantl S. CodY activates transcription of a small RNA in Bacillus subtilis. J Bacteriol 2009; 191:5446-57; PMID:19542274; http://dx.doi.org/10.1128/JB.00602-09
    • (2009) J Bacteriol , vol.191 , pp. 5446-5457
    • Preis, H.1    Eckart, R.A.2    Gudipati, R.K.3    Heidrich, N.4    Brantl, S.5
  • 28
    • 79956068747 scopus 로고    scopus 로고
    • CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers
    • PMID:21532344
    • Marchais A, Duperrier S, Durand S, Gautheret D, Stragier P. CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers. RNA Biol 2011; 8:358-64; PMID:21532344; http://dx.doi.org/10.4161/rna. 8.3.14998
    • (2011) RNA Biol , vol.8 , pp. 358-364
    • Marchais, A.1    Duperrier, S.2    Durand, S.3    Gautheret, D.4    Stragier, P.5
  • 29
    • 30744439103 scopus 로고    scopus 로고
    • Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis
    • PMID:16385044
    • Silvaggi JM, Perkins JB, Losick R. Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis. J Bacteriol 2006; 188:532-41; PMID:16385044; http://dx.doi.org/10.1128/JB.188.2.532-541.2006
    • (2006) J Bacteriol , vol.188 , pp. 532-541
    • Silvaggi, J.M.1    Perkins, J.B.2    Losick, R.3
  • 31
    • 33749165741 scopus 로고    scopus 로고
    • The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism
    • PMID:17020585
    • Heidrich N, Chinali A, Gerth U, Brantl S. The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism. Mol Microbiol 2006; 62:520-36; PMID:17020585; http://dx.doi.org/10. 1111/j.1365-2958.2006.05384.x
    • (2006) Mol Microbiol , vol.62 , pp. 520-536
    • Heidrich, N.1    Chinali, A.2    Gerth, U.3    Brantl, S.4
  • 32
    • 34547829267 scopus 로고    scopus 로고
    • In vitro analysis of the interaction between the small RNA SR1 and its primary target ahrC mRNA
    • PMID:17576690
    • Heidrich N, Moll I, Brantl S. In vitro analysis of the interaction between the small RNA SR1 and its primary target ahrC mRNA. Nucleic Acids Res 2007; 35:4331-46; PMID:17576690; http://dx.doi.org/10.1093/nar/gkm439
    • (2007) Nucleic Acids Res , vol.35 , pp. 4331-4346
    • Heidrich, N.1    Moll, I.2    Brantl, S.3
  • 33
    • 33750823998 scopus 로고    scopus 로고
    • Transcriptional repressor CcpN from Bacillus subtilis compensates asymmetric contact distribution by cooperative binding
    • PMID:17011578
    • Licht A, Brantl S. Transcriptional repressor CcpN from Bacillus subtilis compensates asymmetric contact distribution by cooperative binding. J Mol Biol 2006; 364:434-48; PMID:17011578; http://dx.doi.org/10.1016/j.jmb.2006.09.021
    • (2006) J Mol Biol , vol.364 , pp. 434-448
    • Licht, A.1    Brantl, S.2
  • 34
    • 44649111763 scopus 로고    scopus 로고
    • Identification of ligands affecting the activity of the transcriptional repressor CcpN from Bacillus subtilis
    • PMID:18511073
    • Licht A, Golbik R, Brantl S. Identification of ligands affecting the activity of the transcriptional repressor CcpN from Bacillus subtilis. J Mol Biol 2008; 380:17-30; PMID:18511073; http://dx.doi.org/10.1016/j.jmb.2008.05.002
    • (2008) J Mol Biol , vol.380 , pp. 17-30
    • Licht, A.1    Golbik, R.2    Brantl, S.3
  • 35
    • 71049188000 scopus 로고    scopus 로고
    • The transcriptional repressor CcpN from Bacillus subtilis uses different repression mechanisms at different promoters
    • PMID:19726675
    • Licht A, Brantl S. The transcriptional repressor CcpN from Bacillus subtilis uses different repression mechanisms at different promoters. J Biol Chem 2009; 284:30032-8; PMID:19726675; http://dx.doi.org/10.1074/jbc.M109.033076
    • (2009) J Biol Chem , vol.284 , pp. 30032-30038
    • Licht, A.1    Brantl, S.2
  • 36
    • 84871240106 scopus 로고    scopus 로고
    • SR1 - A small RNA with two remarkably conserved functions
    • PMID:23034808
    • Gimpel M, Preis H, Barth E, Gramzow L, Brantl S. SR1 - a small RNA with two remarkably conserved functions. Nucleic Acids Res 2012; 40:11659-72; PMID:23034808; http://dx.doi.org/10.1093/nar/gks895
    • (2012) Nucleic Acids Res , vol.40 , pp. 11659-11672
    • Gimpel, M.1    Preis, H.2    Barth, E.3    Gramzow, L.4    Brantl, S.5
  • 37
    • 84866979472 scopus 로고    scopus 로고
    • Construction of a modular plasmid family for chromosomal integration in Bacillus subtilis
    • PMID:22982324
    • Gimpel M, Brantl S. Construction of a modular plasmid family for chromosomal integration in Bacillus subtilis. J Microbiol Methods 2012; 91:312-7; PMID:22982324; http://dx.doi.org/10.1016/j.mimet.2012.09.003
    • (2012) J Microbiol Methods , vol.91 , pp. 312-317
    • Gimpel, M.1    Brantl, S.2
  • 38
    • 84875147355 scopus 로고    scopus 로고
    • Bacterial type I toxin-antitoxin systems
    • PMID:23324552
    • Brantl S. Bacterial type I toxin-antitoxin systems. RNA Biol 2012; 9:1488-90; PMID:23324552; http://dx.doi.org/10.4161/rna.23045
    • (2012) RNA Biol , vol.9 , pp. 1488-1490
    • Brantl, S.1
  • 39
    • 25144504247 scopus 로고    scopus 로고
    • Small untranslated RNA antitoxin in Bacillus subtilis
    • PMID:16166525
    • Silvaggi JM, Perkins JB, Losick R. Small untranslated RNA antitoxin in Bacillus subtilis. J Bacteriol 2005; 187:6641-50; PMID:16166525; http://dx.doi.org/10.1128/JB.187.19.6641-6650.2005
    • (2005) J Bacteriol , vol.187 , pp. 6641-6650
    • Silvaggi, J.M.1    Perkins, J.B.2    Losick, R.3
  • 40
    • 84856043718 scopus 로고    scopus 로고
    • BsrG/SR4 from Bacillus subtilis - The first temperature-dependent type I toxin-antitoxin system
    • PMID:22229825
    • Jahn N, Preis H, Wiedemann C, Brantl S. BsrG/SR4 from Bacillus subtilis - the first temperature-dependent type I toxin-antitoxin system. Mol Microbiol 2012; 83:579-98; PMID:22229825; http://dx.doi.org/10.1111/j.1365-2958.2011. 07952.x
    • (2012) Mol Microbiol , vol.83 , pp. 579-598
    • Jahn, N.1    Preis, H.2    Wiedemann, C.3    Brantl, S.4
  • 41
    • 84874197735 scopus 로고    scopus 로고
    • Type I toxin-antitoxin systems in Bacillus subtilis
    • PMID:23059907
    • Durand S, Jahn N, Condon C, Brantl S. Type I toxin-antitoxin systems in Bacillus subtilis. RNA Biol 2012; 9:1491-7; PMID:23059907; http://dx.doi.org/10. 4161/rna.22358
    • (2012) RNA Biol , vol.9 , pp. 1491-1497
    • Durand, S.1    Jahn, N.2    Condon, C.3    Brantl, S.4
  • 42
    • 84872010039 scopus 로고    scopus 로고
    • The essential function of B. subtilis RNase III is to silence foreign toxin genes
    • PMID:23300471
    • Durand S, Gilet L, Condon C. The essential function of B. subtilis RNase III is to silence foreign toxin genes. PLoS Genet 2012; 8:e1003181; PMID:23300471; http://dx.doi.org/10.1371/journal.pgen.1003181
    • (2012) PLoS Genet , vol.8
    • Durand, S.1    Gilet, L.2    Condon, C.3
  • 43
    • 84890103974 scopus 로고    scopus 로고
    • One antitoxin - Two functions: SR4 controls toxin mRNA decay and translation
    • PMID:23969414
    • Jahn N, Brantl S. One antitoxin - two functions: SR4 controls toxin mRNA decay and translation. Nucleic Acids Res 2013; 41:9870-80; PMID:23969414; http://dx.doi.org/10.1093/nar/gkt735
    • (2013) Nucleic Acids Res , vol.41 , pp. 9870-9880
    • Jahn, N.1    Brantl, S.2
  • 44
    • 34247099372 scopus 로고    scopus 로고
    • Regulatory mechanisms employed by cis-encoded antisense RNAs
    • PMID:17387036
    • Brantl S. Regulatory mechanisms employed by cis-encoded antisense RNAs. Curr Opin Microbiol 2007; 10:102-9; PMID:17387036; http://dx.doi.org/10.1016/j. mib.2007.03.012
    • (2007) Curr Opin Microbiol , vol.10 , pp. 102-109
    • Brantl, S.1
  • 45
    • 63449136664 scopus 로고    scopus 로고
    • Extracytoplasmic function sigma factors regulate expression of the Bacillus subtilis yabE gene via a cis-acting antisense RNA
    • PMID:19047346
    • Eiamphungporn W, Helmann JD. Extracytoplasmic function sigma factors regulate expression of the Bacillus subtilis yabE gene via a cis-acting antisense RNA. J Bacteriol 2009; 191:1101-5; PMID:19047346; http://dx.doi.org/ 10.1128/JB.01530-08
    • (2009) J Bacteriol , vol.191 , pp. 1101-1105
    • Eiamphungporn, W.1    Helmann, J.D.2
  • 46
    • 0034072868 scopus 로고    scopus 로고
    • Probing the structure of RNAIII, the Staphylococcus aureus agr regulatory RNA, and identification of the RNA domain involved in repression of protein A expression
    • PMID:10836788
    • Benito Y, Kolb FA, Romby P, Lina G, Etienne J, Vandenesch F. Probing the structure of RNAIII, the Staphylococcus aureus agr regulatory RNA, and identification of the RNA domain involved in repression of protein A expression. RNA 2000; 6:668-79; PMID:10836788; http://dx.doi.org/10.1017/S1355838200992550
    • (2000) RNA , vol.6 , pp. 668-679
    • Benito, Y.1    Kolb, F.A.2    Romby, P.3    Lina, G.4    Etienne, J.5    Vandenesch, F.6
  • 47
    • 34249881878 scopus 로고    scopus 로고
    • Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism
    • PMID:17545468
    • Boisset S, Geissmann T, Huntzinger E, Fechter P, Bendridi N, Possedko M, Chevalier C, Helfer AC, Benito Y, Jacquier A, et al. Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism. Genes Dev 2007; 21:1353-66; PMID:17545468; http://dx.doi.org/10.1101/gad.423507
    • (2007) Genes Dev , vol.21 , pp. 1353-1366
    • Boisset, S.1    Geissmann, T.2    Huntzinger, E.3    Fechter, P.4    Bendridi, N.5    Possedko, M.6    Chevalier, C.7    Helfer, A.C.8    Benito, Y.9    Jacquier, A.10
  • 48
    • 33746561248 scopus 로고    scopus 로고
    • Inhibition of rot translation by RNAIII, a key feature of agr function
    • PMID:16879652
    • Geisinger E, Adhikari RP, Jin R, Ross HF, Novick RP. Inhibition of rot translation by RNAIII, a key feature of agr function. Mol Microbiol 2006; 61:1038-48; PMID:16879652; http://dx.doi.org/10.1111/j.1365-2958.2006.05292.x
    • (2006) Mol Microbiol , vol.61 , pp. 1038-1048
    • Geisinger, E.1    Adhikari, R.P.2    Jin, R.3    Ross, H.F.4    Novick, R.P.5
  • 49
    • 77950404950 scopus 로고    scopus 로고
    • Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation
    • PMID:20300607
    • Chevalier C, Boisset S, Romilly C, Masquida B, Fechter P, Geissmann T, Vandenesch F, Romby P. Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation. PLoS Pathog 2010; 6:e1000809; PMID:20300607; http://dx.doi.org/10.1371/journal.ppat.1000809
    • (2010) PLoS Pathog , vol.6
    • Chevalier, C.1    Boisset, S.2    Romilly, C.3    Masquida, B.4    Fechter, P.5    Geissmann, T.6    Vandenesch, F.7    Romby, P.8
  • 51
    • 84894252717 scopus 로고    scopus 로고
    • ArtR, a novel sRNA of Staphylococcus aureus, regulates α-toxin expression by targeting the 5′ UTR of sarT mRNA
    • (Forthcoming); PMID:23955428
    • Xue T, Zhang X, Sun H, Sun B. ArtR, a novel sRNA of Staphylococcus aureus, regulates α-toxin expression by targeting the 5′ UTR of sarT mRNA. Med Microbiol Immunol 2013; (Forthcoming); PMID:23955428; http://dx.doi.org/10.1007/s00430-013-0307-0
    • (2013) Med Microbiol Immunol
    • Xue, T.1    Zhang, X.2    Sun, H.3    Sun, B.4
  • 52
    • 26444600764 scopus 로고    scopus 로고
    • Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains
    • PMID:16183745
    • Pichon C, Felden B. Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains. Proc Natl Acad Sci U S A 2005; 102:14249-54; PMID:16183745; http://dx.doi.org/10.1073/pnas.0503838102
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 14249-14254
    • Pichon, C.1    Felden, B.2
  • 53
    • 84871545133 scopus 로고    scopus 로고
    • Functional and structural insights of a Staphylococcus aureus apoptotic-like membrane peptide from a toxin-antitoxin module
    • PMID:23129767
    • Sayed N, Nonin-Lecomte S, Réty S, Felden B. Functional and structural insights of a Staphylococcus aureus apoptotic-like membrane peptide from a toxin-antitoxin module. J Biol Chem 2012; 287:43454-63; PMID:23129767; http://dx.doi.org/10.1074/jbc.M112.402693
    • (2012) J Biol Chem , vol.287 , pp. 43454-43463
    • Sayed, N.1    Nonin-Lecomte, S.2    Réty, S.3    Felden, B.4
  • 54
    • 84855464046 scopus 로고    scopus 로고
    • A cis-antisense RNA acts in trans in Staphylococcus aureus to control translation of a human cytolytic peptide
    • PMID:22198463
    • Sayed N, Jousselin A, Felden B. A cis-antisense RNA acts in trans in Staphylococcus aureus to control translation of a human cytolytic peptide. Nat Struct Mol Biol 2012; 19:105-12; PMID:22198463; http://dx.doi.org/10.1038/nsmb. 2193
    • (2012) Nat Struct Mol Biol , vol.19 , pp. 105-112
    • Sayed, N.1    Jousselin, A.2    Felden, B.3
  • 55
    • 77954665866 scopus 로고    scopus 로고
    • A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immuneevasion molecule
    • PMID:20532214
    • Chabelskaya S, Gaillot O, Felden B. A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immuneevasion molecule. PLoS Pathog 2010; 6:e1000927; PMID:20532214; http://dx.doi.org/10.1371/journal.ppat.1000927
    • (2010) PLoS Pathog , vol.6
    • Chabelskaya, S.1    Gaillot, O.2    Felden, B.3
  • 58
    • 84864015491 scopus 로고    scopus 로고
    • Characterization of SSR42, a novel virulence factor regulatory RNA that contributes to the pathogenesis of a Staphylococcus aureus USA300 representative
    • PMID:22493015
    • Morrison JM, Miller EW, Benson MA, Alonzo F 3rd, Yoong P, Torres VJ, Hinrichs SH, Dunman PM. Characterization of SSR42, a novel virulence factor regulatory RNA that contributes to the pathogenesis of a Staphylococcus aureus USA300 representative. J Bacteriol 2012; 194:2924-38; PMID:22493015; http://dx.doi.org/10.1128/JB.06708-11
    • (2012) J Bacteriol , vol.194 , pp. 2924-2938
    • Morrison, J.M.1    Miller, E.W.2    Benson, M.A.3    Alonzo III, F.4    Yoong, P.5    Torres, V.J.6    Hinrichs, S.H.7    Dunman, P.M.8
  • 60
    • 0025027114 scopus 로고
    • Studies on Clostridium acetobutylicum glnA promoters and antisense RNA
    • PMID:1981087
    • Janssen PJ, Jones DT, Woods DR. Studies on Clostridium acetobutylicum glnA promoters and antisense RNA. Mol Microbiol 1990; 4:1575-83; PMID:1981087; http://dx.doi.org/10.1111/j.1365-2958.1990.tb02069.x
    • (1990) Mol Microbiol , vol.4 , pp. 1575-1583
    • Janssen, P.J.1    Jones, D.T.2    Woods, D.R.3
  • 61
    • 0026463806 scopus 로고
    • Differential expression of a Clostridium acetobutylicum antisense RNA: Implications for regulation of glutamine synthetase
    • PMID:1360004
    • Fierro-Monti IP, Reid SJ, Woods DR. Differential expression of a Clostridium acetobutylicum antisense RNA: implications for regulation of glutamine synthetase. J Bacteriol 1992; 174:7642-7; PMID:1360004
    • (1992) J Bacteriol , vol.174 , pp. 7642-7647
    • Fierro-Monti, I.P.1    Reid, S.J.2    Woods, D.R.3
  • 62
    • 54549105804 scopus 로고    scopus 로고
    • S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum
    • PMID:18812398
    • André G, Even S, Putzer H, Burguière P, Croux C, Danchin A, Martin-Verstraete I, Soutourina O. S-box and T-box riboswitches and antisense RNA control a sulfur metabolic operon of Clostridium acetobutylicum. Nucleic Acids Res 2008; 36:5955-69; PMID:18812398; http://dx.doi.org/10.1093/nar/gkn601
    • (2008) Nucleic Acids Res , vol.36 , pp. 5955-5969
    • André, G.1    Even, S.2    Putzer, H.3    Burguière, P.4    Croux, C.5    Danchin, A.6    Martin-Verstraete, I.7    Soutourina, O.8
  • 63
    • 57349187890 scopus 로고    scopus 로고
    • Characterization of genes regulated directly by the VirR/VirS system in Clostridium perfringens
    • PMID:18790863
    • Okumura K, Ohtani K, Hayashi H, Shimizu T. Characterization of genes regulated directly by the VirR/VirS system in Clostridium perfringens. J Bacteriol 2008; 190:7719-27; PMID:18790863; http://dx.doi.org/10.1128/JB.01573- 07
    • (2008) J Bacteriol , vol.190 , pp. 7719-7727
    • Okumura, K.1    Ohtani, K.2    Hayashi, H.3    Shimizu, T.4
  • 64
    • 80052314357 scopus 로고    scopus 로고
    • A novel toxin regulator, the CPE1446-CPE1447 protein heteromeric complex, controls toxin genes in Clostridium perfringens
    • PMID:21725013
    • Obana N, Nakamura K. A novel toxin regulator, the CPE1446-CPE1447 protein heteromeric complex, controls toxin genes in Clostridium perfringens. J Bacteriol 2011; 193:4417-24; PMID:21725013; http://dx.doi.org/10.1128/JB.00262- 11
    • (2011) J Bacteriol , vol.193 , pp. 4417-4424
    • Obana, N.1    Nakamura, K.2
  • 65
    • 85058200762 scopus 로고    scopus 로고
    • Identification of a novel locus that regulates expression of toxin genes in Clostridium perfringens
    • PMID:12007663
    • Ohtani K, Bhowmik SK, Hayashi H, Shimizu T. Identification of a novel locus that regulates expression of toxin genes in Clostridium perfringens. FEMS Microbiol Lett 2002; 209:113-8; PMID:12007663; http://dx.doi.org/10.1111/j.1574- 6968.2002.tb11118.x
    • (2002) FEMS Microbiol Lett , vol.209 , pp. 113-118
    • Ohtani, K.1    Bhowmik, S.K.2    Hayashi, H.3    Shimizu, T.4
  • 66
    • 84880026593 scopus 로고    scopus 로고
    • Unique regulatory mechanism of sporulation and enterotoxin production in Clostridium perfringens
    • PMID:23585540
    • Ohtani K, Hirakawa H, Paredes-Sabja D, Tashiro K, Kuhara S, Sarker MR, Shimizu T. Unique regulatory mechanism of sporulation and enterotoxin production in Clostridium perfringens. J Bacteriol 2013; 195:2931-6; PMID:23585540; http://dx.doi.org/10.1128/JB.02152-12
    • (2013) J Bacteriol , vol.195 , pp. 2931-2936
    • Ohtani, K.1    Hirakawa, H.2    Paredes-Sabja, D.3    Tashiro, K.4    Kuhara, S.5    Sarker, M.R.6    Shimizu, T.7
  • 67
    • 79955125027 scopus 로고    scopus 로고
    • Small RNAs in the genus Clostridium
    • PMID:21264064
    • Chen Y, Indurthi DC, Jones SW, Papoutsakis ET. Small RNAs in the genus Clostridium. MBio 2011; 2:e00340-10; PMID:21264064; http://dx.doi.org/10.1128/ mBio.00340-10
    • (2011) MBio , vol.2
    • Chen, Y.1    Indurthi, D.C.2    Jones, S.W.3    Papoutsakis, E.T.4
  • 69
    • 77950356238 scopus 로고    scopus 로고
    • Defining a role for Hfq in Gram-positive bacteria: Evidence for Hfq-dependent antisense regulation in Listeria monocytogenes
    • PMID:19942685
    • Nielsen JS, Lei LK, Ebersbach T, Olsen AS, Klitgaard JK, Valentin-Hansen P, Kallipolitis BH. Defining a role for Hfq in Gram-positive bacteria: evidence for Hfq-dependent antisense regulation in Listeria monocytogenes. Nucleic Acids Res 2010; 38:907-19; PMID:19942685; http://dx.doi.org/10.1093/nar/gkp1081
    • (2010) Nucleic Acids Res , vol.38 , pp. 907-919
    • Nielsen, J.S.1    Lei, L.K.2    Ebersbach, T.3    Olsen, A.S.4    Klitgaard, J.K.5    Valentin-Hansen, P.6    Kallipolitis, B.H.7
  • 73
    • 84872491794 scopus 로고    scopus 로고
    • The excludon: A new concept in bacterial antisense RNA-mediated gene regulation
    • PMID:23268228
    • Sesto N, Wurtzel O, Archambaud C, Sorek R, Cossart P. The excludon: a new concept in bacterial antisense RNA-mediated gene regulation. Nat Rev Microbiol 2013; 11:75-82; PMID:23268228; http://dx.doi.org/10.1038/nrmicro2934
    • (2013) Nat Rev Microbiol , vol.11 , pp. 75-82
    • Sesto, N.1    Wurtzel, O.2    Archambaud, C.3    Sorek, R.4    Cossart, P.5
  • 75
    • 78649989435 scopus 로고    scopus 로고
    • The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript
    • PMID:21143309
    • Ramirez-Peña E, Treviño J, Liu Z, Perez N, Sumby P. The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript. Mol Microbiol 2010; 78:1332-47; PMID:21143309; http://dx.doi.org/10.1111/j.1365-2958.2010.07427.x
    • (2010) Mol Microbiol , vol.78 , pp. 1332-1347
    • Ramirez-Peña, E.1    Treviño, J.2    Liu, Z.3    Perez, N.4    Sumby, P.5
  • 76
    • 0036081408 scopus 로고    scopus 로고
    • Dual control of streptokinase and streptolysin S production by the covRS and fas-CAX two-component regulators in Streptococcus dysgalactiae subsp. equisimilis
    • PMID:12065504
    • Steiner K, Malke H. Dual control of streptokinase and streptolysin S production by the covRS and fas-CAX two-component regulators in Streptococcus dysgalactiae subsp. equisimilis. Infect Immun 2002; 70:3627-36; PMID:12065504; http://dx.doi.org/10.1128/IAI.70.7.3627-3636.2002
    • (2002) Infect Immun , vol.70 , pp. 3627-3636
    • Steiner, K.1    Malke, H.2
  • 77
    • 84860733797 scopus 로고    scopus 로고
    • Small RNAs in streptococci
    • PMID:22546939
    • Le Rhun A, Charpentier E. Small RNAs in streptococci. RNA Biol 2012; 9:414-26; PMID:22546939; http://dx.doi.org/10.4161/rna.20104
    • (2012) RNA Biol , vol.9 , pp. 414-426
    • Le Rhun, A.1    Charpentier, E.2
  • 78
    • 84857386433 scopus 로고    scopus 로고
    • Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae
    • PMID:22274957
    • Acebo P, Martin-Galiano AJ, Navarro S, Zaballos A, Amblar M. Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae. RNA 2012; 18:530-46; PMID:22274957; http://dx.doi.org/10.1261/rna.027359.111
    • (2012) RNA , vol.18 , pp. 530-546
    • Acebo, P.1    Martin-Galiano, A.J.2    Navarro, S.3    Zaballos, A.4    Amblar, M.5
  • 79
    • 0029781001 scopus 로고    scopus 로고
    • Identification of the streptococcal competence-pheromone receptor
    • PMID:8878047
    • Håvarstein LS, Gaustad P, Nes IF, Morrison DA. Identification of the streptococcal competence-pheromone receptor. Mol Microbiol 1996; 21:863-9; PMID:8878047; http://dx.doi.org/10.1046/j.1365-2958.1996.521416.x
    • (1996) Mol Microbiol , vol.21 , pp. 863-869
    • Håvarstein, L.S.1    Gaustad, P.2    Nes, I.F.3    Morrison, D.A.4
  • 81
    • 34548700626 scopus 로고    scopus 로고
    • Identification of the genes directly controlled by the response regulator CiaR in Streptococcus pneumoniae: Five out of 15 promoters drive expression of small non-coding RNAs
    • PMID:17725562
    • Halfmann A, Kovács M, Hakenbeck R, Brückner R. Identification of the genes directly controlled by the response regulator CiaR in Streptococcus pneumoniae : five out of 15 promoters drive expression of small non-coding RNAs. Mol Microbiol 2007; 66:110-26; PMID:17725562; http://dx.doi.org/10.1111/j.1365-2958.2007.05900.x
    • (2007) Mol Microbiol , vol.66 , pp. 110-126
    • Halfmann, A.1    Kovács, M.2    Hakenbeck, R.3    Brückner, R.4
  • 82
    • 73849125970 scopus 로고    scopus 로고
    • Identification and characterization of noncoding small RNAs in Streptococcus pneumoniae serotype 2 strain D39
    • PMID:19854910
    • Tsui H-CT, Mukherjee D, Ray VA, Sham LT, Feig AL, Winkler ME. Identification and characterization of noncoding small RNAs in Streptococcus pneumoniae serotype 2 strain D39. J Bacteriol 2010; 192:264-79; PMID:19854910; http://dx.doi.org/10.1128/JB.01204-09
    • (2010) J Bacteriol , vol.192 , pp. 264-279
    • Tsui, H.-C.T.1    Mukherjee, D.2    Ray, V.A.3    Sham, L.T.4    Feig, A.L.5    Winkler, M.E.6
  • 83
    • 78549264826 scopus 로고    scopus 로고
    • Identification of genes for small non-coding RNAs that belong to the regulon of the two-component regulatory system CiaRH in Streptococcus
    • PMID:21106082
    • Marx P, Nuhn M, Kovács M, Hakenbeck R, Brückner R. Identification of genes for small non-coding RNAs that belong to the regulon of the two-component regulatory system CiaRH in Streptococcus. BMC Genomics 2010; 11:661; PMID:21106082; http://dx.doi.org/10.1186/1471-2164-11-661
    • (2010) BMC Genomics , vol.11 , pp. 661
    • Marx, P.1    Nuhn, M.2    Kovács, M.3    Hakenbeck, R.4    Brückner, R.5
  • 84
    • 70449435697 scopus 로고    scopus 로고
    • A genome-wide analysis of small regulatory RNAs in the human pathogen group A Streptococcus
    • PMID:19888332
    • Perez N, Treviño J, Liu Z, Ho SC, Babitzke P, Sumby P. A genome-wide analysis of small regulatory RNAs in the human pathogen group A Streptococcus. PLoS One 2009; 4:e7668; PMID:19888332; http://dx.doi.org/10.1371/ journal.pone.0007668
    • (2009) PLoS One , vol.4
    • Perez, N.1    Treviño, J.2    Liu, Z.3    Ho, S.C.4    Babitzke, P.5    Sumby, P.6
  • 85
    • 84880134951 scopus 로고    scopus 로고
    • Target evaluation of the non-coding csRNAs reveals a link of the two-component regulatory system CiaRH to competence control in Streptococcus pneumoniae R6
    • PMID:23710838
    • Schnorpfeil A, Kranz M, Kovács M, Kirsch C, Gartmann J, Brunner I, Bittmann S, Brückner R. Target evaluation of the non-coding csRNAs reveals a link of the two-component regulatory system CiaRH to competence control in Streptococcus pneumoniae R6. Mol Microbiol 2013; 89:334-49; PMID:23710838; http://dx.doi.org/10.1111/mmi.12277
    • (2013) Mol Microbiol , vol.89 , pp. 334-349
    • Schnorpfeil, A.1    Kranz, M.2    Kovács, M.3    Kirsch, C.4    Gartmann, J.5    Brunner, I.6    Bittmann, S.7    Brückner, R.8
  • 86
    • 0028845364 scopus 로고
    • An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae
    • PMID:7479953
    • Håvarstein LS, Coomaraswamy G, Morrison DA. An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae. Proc Natl Acad Sci U S A 1995; 92:11140-4; PMID:7479953; http://dx.doi.org/10.1073/pnas.92.24.11140
    • (1995) Proc Natl Acad Sci U S A , vol.92 , pp. 11140-11144
    • Håvarstein, L.S.1    Coomaraswamy, G.2    Morrison, D.A.3
  • 87
    • 0028276787 scopus 로고
    • A two-component signal-transducing system is involved in competence and penicillin susceptibility in laboratory mutants of Streptococcus pneumoniae
    • PMID:8065267
    • Guenzi E, Gasc AM, Sicard MA, Hakenbeck R. A two-component signal-transducing system is involved in competence and penicillin susceptibility in laboratory mutants of Streptococcus pneumoniae. Mol Microbiol 1994; 12:505-15; PMID:8065267; http://dx.doi.org/10.1111/j.1365-2958.1994. tb01038.x
    • (1994) Mol Microbiol , vol.12 , pp. 505-515
    • Guenzi, E.1    Gasc, A.M.2    Sicard, M.A.3    Hakenbeck, R.4
  • 88
    • 80155164907 scopus 로고    scopus 로고
    • Effect of new alleles of the histidine kinase gene ciaH on the activity of the response regulator CiaR in Streptococcus pneumoniae R6
    • PMID:21903754
    • Müller M, Marx P, Hakenbeck R, Brückner R. Effect of new alleles of the histidine kinase gene ciaH on the activity of the response regulator CiaR in Streptococcus pneumoniae R6. Microbiology 2011; 157:3104-12; PMID:21903754; http://dx.doi.org/10.1099/mic.0.053157-0
    • (2011) Microbiology , vol.157 , pp. 3104-3112
    • Müller, M.1    Marx, P.2    Hakenbeck, R.3    Brückner, R.4
  • 89
    • 84869073827 scopus 로고    scopus 로고
    • The HtrA protease from Streptococcus pneumoniae digests both denatured proteins and the competence-stimulating peptide
    • PMID:23012372
    • Cassone M, Gagne AL, Spruce LA, Seeholzer SH, Sebert ME. The HtrA protease from Streptococcus pneumoniae digests both denatured proteins and the competence-stimulating peptide. J Biol Chem 2012; 287:38449-59; PMID:23012372; http://dx.doi.org/10.1074/jbc.M112.391482
    • (2012) J Biol Chem , vol.287 , pp. 38449-38459
    • Cassone, M.1    Gagne, A.L.2    Spruce, L.A.3    Seeholzer, S.H.4    Sebert, M.E.5
  • 90
    • 79960433506 scopus 로고    scopus 로고
    • Hfq and its constellation of RNA
    • PMID:21760622
    • Vogel J, Luisi BF. Hfq and its constellation of RNA. Nat Rev Microbiol 2011; 9:578-89; PMID:21760622; http://dx.doi.org/10.1038/nrmicro2615
    • (2011) Nat Rev Microbiol , vol.9 , pp. 578-589
    • Vogel, J.1    Luisi, B.F.2
  • 91
    • 78649885541 scopus 로고    scopus 로고
    • RNAs actively cycle on the Sm-like protein Hfq
    • PMID:21123649
    • Fender A, Elf J, Hampel K, Zimmermann B, Wagner EGH. RNAs actively cycle on the Sm-like protein Hfq. Genes Dev 2010; 24:2621-6; PMID:21123649; http://dx.doi.org/10.1101/gad.591310
    • (2010) Genes Dev , vol.24 , pp. 2621-2626
    • Fender, A.1    Elf, J.2    Hampel, K.3    Zimmermann, B.4    Wagner, E.G.H.5
  • 92
    • 33847095025 scopus 로고    scopus 로고
    • No detectable effect of RNA-binding protein Hfq absence in Staphylococcus aureus
    • PMID:17291347
    • Bohn C, Rigoulay C, Bouloc P. No detectable effect of RNA-binding protein Hfq absence in Staphylococcus aureus. BMC Microbiol 2007; 7:10; http://dx.doi.org/10.1186/1471-2180-7-10; PMID:17291347
    • (2007) BMC Microbiol , vol.7 , pp. 10
    • Bohn, C.1    Rigoulay, C.2    Bouloc, P.3
  • 93
    • 77958547418 scopus 로고    scopus 로고
    • Hfq is a global regulator that controls the pathogenicity of Staphylococcus aureus
    • PMID:20927372
    • Liu Y, Wu N, Dong J, Gao Y, Zhang X, Mu C, Shao N, Yang G. Hfq is a global regulator that controls the pathogenicity of Staphylococcus aureus. PLoS One 2010; 5:e13069; PMID:20927372; http://dx.doi.org/10.1371/journal.pone. 0013069
    • (2010) PLoS One , vol.5
    • Liu, Y.1    Wu, N.2    Dong, J.3    Gao, Y.4    Zhang, X.5    Mu, C.6    Shao, N.7    Yang, G.8
  • 94
    • 84861594919 scopus 로고    scopus 로고
    • Lack of interchangeability of Hfq-like proteins
    • PMID:22326874
    • Rochat T, Bouloc P, Yang Q, Bossi L, Figueroa-Bossi N. Lack of interchangeability of Hfq-like proteins. Biochimie 2012; 94:1554-9; PMID:22326874; http://dx.doi.org/10.1016/j.biochi.2012.01.016
    • (2012) Biochimie , vol.94 , pp. 1554-1559
    • Rochat, T.1    Bouloc, P.2    Yang, Q.3    Bossi, L.4    Figueroa-Bossi, N.5
  • 95
    • 79959486063 scopus 로고    scopus 로고
    • A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq
    • PMID:21325267
    • Pandey SP, Minesinger BK, Kumar J, Walker GC. A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq. Nucleic Acids Res 2011; 39:4691-708; PMID:21325267; http://dx.doi.org/10. 1093/nar/gkr060
    • (2011) Nucleic Acids Res , vol.39 , pp. 4691-4708
    • Pandey, S.P.1    Minesinger, B.K.2    Kumar, J.3    Walker, G.C.4
  • 96
    • 77952236323 scopus 로고    scopus 로고
    • RNAi-dependent formation of heterochromatin and its diverse functions
    • PMID:20207534
    • Grewal SI. RNAi-dependent formation of heterochromatin and its diverse functions. Curr Opin Genet Dev 2010; 20:134-41; PMID:20207534; http://dx.doi.org/10.1016/j.gde.2010.02.003
    • (2010) Curr Opin Genet Dev , vol.20 , pp. 134-141
    • Grewal, S.I.1
  • 97
    • 0035205381 scopus 로고    scopus 로고
    • RNA expression analysis using an antisense Bacillus subtilis genome array
    • PMID:11717296
    • Lee JM, Zhang S, Saha S, Santa Anna S, Jiang C, Perkins J. RNA expression analysis using an antisense Bacillus subtilis genome array. J Bacteriol 2001; 183:7371-80; PMID:11717296; http://dx.doi.org/10.1128/JB.183.24.7371-7380.2001
    • (2001) J Bacteriol , vol.183 , pp. 7371-7380
    • Lee, J.M.1    Zhang, S.2    Saha, S.3    Santa Anna, S.4    Jiang, C.5    Perkins, J.6
  • 98
    • 56949094523 scopus 로고    scopus 로고
    • Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis
    • PMID:18948176
    • Saito S, Kakeshita H, Nakamura K. Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis. Gene 2009; 428:2-8; PMID:18948176; http://dx.doi.org/10.1016/j.gene.2008.09.024
    • (2009) Gene , vol.428 , pp. 2-8
    • Saito, S.1    Kakeshita, H.2    Nakamura, K.3
  • 100
    • 66449091512 scopus 로고    scopus 로고
    • Single-pass classification of all non-coding sequences in a bacterial genome using phylogenetic profiles
    • PMID:19237465
    • Marchais A, Naville M, Bohn C, Bouloc P, Gautheret D. Single-pass classification of all non-coding sequences in a bacterial genome using phylogenetic profiles. Genome Res 2009; 19:1084-92; PMID:19237465; http://dx.doi.org/10.1101/gr.089714.108
    • (2009) Genome Res , vol.19 , pp. 1084-1092
    • Marchais, A.1    Naville, M.2    Bohn, C.3    Bouloc, P.4    Gautheret, D.5
  • 101
    • 77956278172 scopus 로고    scopus 로고
    • Cartography of methicillin-resistant S. aureus transcripts: Detection, orientation and temporal expression during growth phase and stress conditions
    • PMID:20505759
    • Beaume M, Hernandez D, Farinelli L, Deluen C, Linder P, Gaspin C, Romby P, Schrenzel J, François P. Cartography of methicillin-resistant S. aureus transcripts: detection, orientation and temporal expression during growth phase and stress conditions. PLoS One 2010; 5:e10725; PMID:20505759; http://dx.doi.org/10.1371/journal.pone.0010725
    • (2010) PLoS One , vol.5
    • Beaume, M.1    Hernandez, D.2    Farinelli, L.3    Deluen, C.4    Linder, P.5    Gaspin, C.6    Romby, P.7    Schrenzel, J.8    François, P.9
  • 102
    • 77954563760 scopus 로고    scopus 로고
    • Identification of differentially expressed small non-protein-coding RNAs in Staphylococcus aureus displaying both the normal and the small-colony variant phenotype
    • PMID:20151104
    • Abu-Qatouseh LF, Chinni SV, Seggewiss J, Proctor RA, Brosius J, Rozhdestvensky TS, Peters G, von Eiff C, Becker K. Identification of differentially expressed small non-protein-coding RNAs in Staphylococcus aureus displaying both the normal and the small-colony variant phenotype. J Mol Med (Berl) 2010; 88:565-75; PMID:20151104; http://dx.doi.org/10.1007/s00109-010- 0597-2
    • (2010) J Mol Med (Berl) , vol.88 , pp. 565-575
    • Abu-Qatouseh, L.F.1    Chinni, S.V.2    Seggewiss, J.3    Proctor, R.A.4    Brosius, J.5    Rozhdestvensky, T.S.6    Peters, G.7    Von Eiff, C.8    Becker, K.9
  • 103
    • 84880279404 scopus 로고    scopus 로고
    • Analysis of the small RNA transcriptional response in multidrug-resistant Staphylococcus aureus after antimicrobial exposure
    • PMID:23733475
    • Howden BP, Beaume M, Harrison PF, Hernandez D, Schrenzel J, Seemann T, Francois P, Stinear TP. Analysis of the small RNA transcriptional response in multidrug-resistant Staphylococcus aureus after antimicrobial exposure. Antimicrob Agents Chemother 2013; 57:3864-74; PMID:23733475; http://dx.doi.org/10.1128/AAC.00263-13
    • (2013) Antimicrob Agents Chemother , vol.57 , pp. 3864-3874
    • Howden, B.P.1    Beaume, M.2    Harrison, P.F.3    Hernandez, D.4    Schrenzel, J.5    Seemann, T.6    Francois, P.7    Stinear, T.P.8
  • 104
    • 33847371621 scopus 로고    scopus 로고
    • Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets
    • PMID:17259222
    • Mandin P, Repoila F, Vergassola M, Geissmann T, Cossart P. Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets. Nucleic Acids Res 2007; 35:962-74; PMID:17259222; http://dx.doi.org/10.1093/ nar/gkl1096
    • (2007) Nucleic Acids Res , vol.35 , pp. 962-974
    • Mandin, P.1    Repoila, F.2    Vergassola, M.3    Geissmann, T.4    Cossart, P.5
  • 105
    • 75149149874 scopus 로고    scopus 로고
    • Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs
    • PMID:20042087
    • Oliver HF, Orsi RH, Ponnala L, Keich U, Wang W, Sun Q, Cartinhour SW, Filiatrault MJ, Wiedmann M, Boor KJ. Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs. BMC Genomics 2009; 10:641; PMID:20042087; http://dx.doi.org/10.1186/1471-2164-10-641
    • (2009) BMC Genomics , vol.10 , pp. 641
    • Oliver, H.F.1    Orsi, R.H.2    Ponnala, L.3    Keich, U.4    Wang, W.5    Sun, Q.6    Cartinhour, S.W.7    Filiatrault, M.J.8    Wiedmann, M.9    Boor, K.J.10
  • 107
    • 84860720471 scopus 로고    scopus 로고
    • The non-coding RNA world of the bacterial pathogen Listeria monocytogenes
    • PMID:22336762
    • Mellin JR, Cossart P. The non-coding RNA world of the bacterial pathogen Listeria monocytogenes. RNA Biol 2012; 9:372-8; PMID:22336762; http://dx.doi.org/10.4161/rna.19235
    • (2012) RNA Biol , vol.9 , pp. 372-378
    • Mellin, J.R.1    Cossart, P.2
  • 108
    • 84867313151 scopus 로고    scopus 로고
    • Identification of novel growth phase- and media-dependent small non-coding RNAs in Streptococcus pyogenes M49 using intergenic tiling arrays
    • PMID:23062031
    • Patenge N, Billion A, Raasch P, Normann J, Wisniewska-Kucper A, Retey J, Boisguérin V, Hartsch T, Hain T, Kreikemeyer B. Identification of novel growth phase- and media-dependent small non-coding RNAs in Streptococcus pyogenes M49 using intergenic tiling arrays. BMC Genomics 2012; 13:550; PMID:23062031; http://dx.doi.org/10.1186/1471-2164-13-550
    • (2012) BMC Genomics , vol.13 , pp. 550
    • Patenge, N.1    Billion, A.2    Raasch, P.3    Normann, J.4    Wisniewska-Kucper, A.5    Retey, J.6    Boisguérin, V.7    Hartsch, T.8    Hain, T.9    Kreikemeyer, B.10
  • 110
    • 77952987152 scopus 로고    scopus 로고
    • Identification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arrays
    • PMID:20525227
    • Kumar R, Shah P, Swiatlo E, Burgess SC, Lawrence ML, Nanduri B. Identification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arrays. BMC Genomics 2010; 11:350; PMID:20525227; http://dx.doi.org/10.1186/1471-2164-11-350
    • (2010) BMC Genomics , vol.11 , pp. 350
    • Kumar, R.1    Shah, P.2    Swiatlo, E.3    Burgess, S.C.4    Lawrence, M.L.5    Nanduri, B.6


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