-
1
-
-
33746533172
-
Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2
-
Livny J, Brencic A, Lory S, Waldor MK, (2006) Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2. Nucleic Acids Res 34: 3484-3493.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 3484-3493
-
-
Livny, J.1
Brencic, A.2
Lory, S.3
Waldor, M.K.4
-
2
-
-
34247173351
-
Identification of small RNAs in diverse bacterial species
-
Livny J, Waldor MK, (2007) Identification of small RNAs in diverse bacterial species. Curr Opin Microbiol 10: 96-101.
-
(2007)
Curr Opin Microbiol
, vol.10
, pp. 96-101
-
-
Livny, J.1
Waldor, M.K.2
-
3
-
-
77958028354
-
Regulatory RNA in bacterial pathogens
-
Papenfort K, Vogel J, (2010) Regulatory RNA in bacterial pathogens. Cell Host Microbe 8: 116-127.
-
(2010)
Cell Host Microbe
, vol.8
, pp. 116-127
-
-
Papenfort, K.1
Vogel, J.2
-
4
-
-
60149089144
-
Regulatory RNAs in bacteria
-
Waters LS, Storz G, (2009) Regulatory RNAs in bacteria. Cell 136: 615-628.
-
(2009)
Cell
, vol.136
, pp. 615-628
-
-
Waters, L.S.1
Storz, G.2
-
5
-
-
0141644746
-
Global analysis of small RNA and mRNA targets of Hfq
-
Zhang A, Wassarman KM, Rosenow C, Tjaden BC, Storz G, et al. (2003) Global analysis of small RNA and mRNA targets of Hfq. Mol Microbiol 50: 1111-1124.
-
(2003)
Mol Microbiol
, vol.50
, pp. 1111-1124
-
-
Zhang, A.1
Wassarman, K.M.2
Rosenow, C.3
Tjaden, B.C.4
Storz, G.5
-
6
-
-
75249100904
-
The role of Hfq in bacterial pathogens
-
Chao Y, Vogel J, (2010) The role of Hfq in bacterial pathogens. Curr Opin Microbiol 13: 24-33.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 24-33
-
-
Chao, Y.1
Vogel, J.2
-
7
-
-
2442645227
-
The RNA-binding protein Hfq of Listeria monocytogenes: role in stress tolerance and virulence
-
Christiansen JK, Larsen MH, Ingmer H, Sogaard-Andersen L, Kallipolitis BH, (2004) The RNA-binding protein Hfq of Listeria monocytogenes: role in stress tolerance and virulence. J Bacteriol 186: 3355-3362.
-
(2004)
J Bacteriol
, vol.186
, pp. 3355-3362
-
-
Christiansen, J.K.1
Larsen, M.H.2
Ingmer, H.3
Sogaard-Andersen, L.4
Kallipolitis, B.H.5
-
8
-
-
70349241915
-
The effect of hfq on global gene expression and virulence in Neisseria gonorrhoeae
-
Dietrich M, Munke R, Gottschald M, Ziska E, Boettcher JP, et al. (2009) The effect of hfq on global gene expression and virulence in Neisseria gonorrhoeae. FEBS J 276: 5507-5520.
-
(2009)
FEBS J
, vol.276
, pp. 5507-5520
-
-
Dietrich, M.1
Munke, R.2
Gottschald, M.3
Ziska, E.4
Boettcher, J.P.5
-
9
-
-
67649268395
-
The Listeria transcriptional landscape from saprophytism to virulence
-
Toledo-Arana A, Dussurget O, Nikitas G, Sesto N, Guet-Revillet H, et al. (2009) The Listeria transcriptional landscape from saprophytism to virulence. Nature 459: 950-956.
-
(2009)
Nature
, vol.459
, pp. 950-956
-
-
Toledo-Arana, A.1
Dussurget, O.2
Nikitas, G.3
Sesto, N.4
Guet-Revillet, H.5
-
10
-
-
33847095025
-
No detectable effect of RNA-binding protein Hfq absence in Staphylococcus aureus
-
Bohn C, Rigoulay C, Bouloc P, (2007) No detectable effect of RNA-binding protein Hfq absence in Staphylococcus aureus. BMC Microbiol 7: 10.
-
(2007)
BMC Microbiol
, vol.7
, pp. 10
-
-
Bohn, C.1
Rigoulay, C.2
Bouloc, P.3
-
11
-
-
77952987152
-
Identification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arrays
-
Kumar R, Shah P, Swiatlo E, Burgess SC, Lawrence ML, et al. (2010) Identification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arrays. BMC Genomics 11: 350.
-
(2010)
BMC Genomics
, vol.11
, pp. 350
-
-
Kumar, R.1
Shah, P.2
Swiatlo, E.3
Burgess, S.C.4
Lawrence, M.L.5
-
12
-
-
73849125970
-
Identification and characterization of noncoding small RNAs in Streptococcus pneumoniae serotype 2 strain D39
-
Tsui HC, Mukherjee D, Ray VA, Sham LT, Feig AL, et al. (2010) Identification and characterization of noncoding small RNAs in Streptococcus pneumoniae serotype 2 strain D39. J Bacteriol 192: 264-279.
-
(2010)
J Bacteriol
, vol.192
, pp. 264-279
-
-
Tsui, H.C.1
Mukherjee, D.2
Ray, V.A.3
Sham, L.T.4
Feig, A.L.5
-
13
-
-
83855160793
-
Analysis of microRNA-size, small RNAs in Streptococcus mutans by deep sequencing
-
Lee HJ, Hong SH, (2012) Analysis of microRNA-size, small RNAs in Streptococcus mutans by deep sequencing. FEMS Microbiol Lett 326: 131-136.
-
(2012)
FEMS Microbiol Lett
, vol.326
, pp. 131-136
-
-
Lee, H.J.1
Hong, S.H.2
-
14
-
-
36549029160
-
RivR and the small RNA RivX: the missing links between the CovR regulatory cascade and the Mga regulon
-
Roberts SA, Scott JR, (2007) RivR and the small RNA RivX: the missing links between the CovR regulatory cascade and the Mga regulon. Mol Microbiol 66: 1506-1522.
-
(2007)
Mol Microbiol
, vol.66
, pp. 1506-1522
-
-
Roberts, S.A.1
Scott, J.R.2
-
15
-
-
22644439820
-
Global epithelial cell transcriptional responses reveal Streptococcus pyogenes Fas regulator activity association with bacterial aggressiveness
-
Klenk M, Koczan D, Guthke R, Nakata M, Thiesen HJ, et al. (2005) Global epithelial cell transcriptional responses reveal Streptococcus pyogenes Fas regulator activity association with bacterial aggressiveness. Cell Microbiol 7: 1237-1250.
-
(2005)
Cell Microbiol
, vol.7
, pp. 1237-1250
-
-
Klenk, M.1
Koczan, D.2
Guthke, R.3
Nakata, M.4
Thiesen, H.J.5
-
16
-
-
0035151016
-
Group A streptococcal growth phase-associated virulence factor regulation by a novel operon (Fas) with homologies to two-component-type regulators requires a small RNA molecule
-
Kreikemeyer B, Boyle MD, Buttaro BA, Heinemann M, Podbielski A, (2001) Group A streptococcal growth phase-associated virulence factor regulation by a novel operon (Fas) with homologies to two-component-type regulators requires a small RNA molecule. Mol Microbiol 39: 392-406.
-
(2001)
Mol Microbiol
, vol.39
, pp. 392-406
-
-
Kreikemeyer, B.1
Boyle, M.D.2
Buttaro, B.A.3
Heinemann, M.4
Podbielski, A.5
-
17
-
-
78649989435
-
The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript
-
Ramirez-Pena E, Trevino J, Liu Z, Perez N, Sumby P, (2010) The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript. Mol Microbiol 78: 1332-1347.
-
(2010)
Mol Microbiol
, vol.78
, pp. 1332-1347
-
-
Ramirez-Pena, E.1
Trevino, J.2
Liu, Z.3
Perez, N.4
Sumby, P.5
-
18
-
-
79953250082
-
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
-
Deltcheva E, Chylinski K, Sharma CM, Gonzales K, Chao Y, et al. (2011) CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III. Nature 471: 602-607.
-
(2011)
Nature
, vol.471
, pp. 602-607
-
-
Deltcheva, E.1
Chylinski, K.2
Sharma, C.M.3
Gonzales, K.4
Chao, Y.5
-
19
-
-
4444351650
-
Synthesis of group A streptococcal virulence factors is controlled by a regulatory RNA molecule
-
Mangold M, Siller M, Roppenser B, Vlaminckx BJ, Penfound TA, et al. (2004) Synthesis of group A streptococcal virulence factors is controlled by a regulatory RNA molecule. Mol Microbiol 53: 1515-1527.
-
(2004)
Mol Microbiol
, vol.53
, pp. 1515-1527
-
-
Mangold, M.1
Siller, M.2
Roppenser, B.3
Vlaminckx, B.J.4
Penfound, T.A.5
-
20
-
-
71549126189
-
Activation of gene expression by small RNA
-
Frohlich KS, Vogel J, (2009) Activation of gene expression by small RNA. Curr Opin Microbiol 12: 674-682.
-
(2009)
Curr Opin Microbiol
, vol.12
, pp. 674-682
-
-
Frohlich, K.S.1
Vogel, J.2
-
22
-
-
77954665866
-
A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immune-evasion molecule
-
Chabelskaya S, Gaillot O, Felden B, (2010) A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immune-evasion molecule. PLoS Pathog 6: e1000927.
-
(2010)
PLoS Pathog
, vol.6
-
-
Chabelskaya, S.1
Gaillot, O.2
Felden, B.3
-
23
-
-
77952367483
-
The 4.5S RNA component of the signal recognition particle is required for group A Streptococcus virulence
-
Trevino J, Perez N, Sumby P, (2010) The 4.5S RNA component of the signal recognition particle is required for group A Streptococcus virulence. Microbiology 156: 1342-1350.
-
(2010)
Microbiology
, vol.156
, pp. 1342-1350
-
-
Trevino, J.1
Perez, N.2
Sumby, P.3
-
24
-
-
79953268826
-
The Staphylococcus aureus RNome and its commitment to virulence
-
Felden B, Vandenesch F, Bouloc P, Romby P, (2011) The Staphylococcus aureus RNome and its commitment to virulence. PLoS Pathog 7: e1002006.
-
(2011)
PLoS Pathog
, vol.7
-
-
Felden, B.1
Vandenesch, F.2
Bouloc, P.3
Romby, P.4
-
25
-
-
0027180031
-
Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule
-
Novick RP, Ross HF, Projan SJ, Kornblum J, Kreiswirth B, et al. (1993) Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule. EMBO J 12: 3967-3975.
-
(1993)
EMBO J
, vol.12
, pp. 3967-3975
-
-
Novick, R.P.1
Ross, H.F.2
Projan, S.J.3
Kornblum, J.4
Kreiswirth, B.5
-
26
-
-
20144380295
-
Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression
-
Huntzinger E, Boisset S, Saveanu C, Benito Y, Geissmann T, et al. (2005) Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression. EMBO J 24: 824-835.
-
(2005)
EMBO J
, vol.24
, pp. 824-835
-
-
Huntzinger, E.1
Boisset, S.2
Saveanu, C.3
Benito, Y.4
Geissmann, T.5
-
27
-
-
34249881878
-
Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism
-
Boisset S, Geissmann T, Huntzinger E, Fechter P, Bendridi N, et al. (2007) Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism. Genes Dev 21: 1353-1366.
-
(2007)
Genes Dev
, vol.21
, pp. 1353-1366
-
-
Boisset, S.1
Geissmann, T.2
Huntzinger, E.3
Fechter, P.4
Bendridi, N.5
-
28
-
-
77950404950
-
Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation
-
Chevalier C, Boisset S, Romilly C, Masquida B, Fechter P, et al. (2010) Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation. PLoS Pathog 6: e1000809.
-
(2010)
PLoS Pathog
, vol.6
-
-
Chevalier, C.1
Boisset, S.2
Romilly, C.3
Masquida, B.4
Fechter, P.5
-
29
-
-
33847371621
-
Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets
-
Mandin P, Repoila F, Vergassola M, Geissmann T, Cossart P, (2007) Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets. Nucleic Acids Res 35: 962-974.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 962-974
-
-
Mandin, P.1
Repoila, F.2
Vergassola, M.3
Geissmann, T.4
Cossart, P.5
-
30
-
-
80053062656
-
Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence
-
Koo JT, Alleyne TM, Schiano CA, Jafari N, Lathem WW, (2011) Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence. Proc Natl Acad Sci U S A 108: E709-17.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
-
-
Koo, J.T.1
Alleyne, T.M.2
Schiano, C.A.3
Jafari, N.4
Lathem, W.W.5
-
31
-
-
80053458416
-
A Salmonella small non-coding RNA facilitates bacterial invasion and intracellular replication by modulating the expression of virulence factors
-
Gong H, Vu GP, Bai Y, Chan E, Wu R, et al. (2011) A Salmonella small non-coding RNA facilitates bacterial invasion and intracellular replication by modulating the expression of virulence factors. PLoS Pathog 7: e1002120.
-
(2011)
PLoS Pathog
, vol.7
-
-
Gong, H.1
Vu, G.P.2
Bai, Y.3
Chan, E.4
Wu, R.5
-
32
-
-
77955397921
-
Multiple colonization with S. pneumoniae before and after introduction of the seven-valent conjugated pneumococcal polysaccharide vaccine
-
Brugger SD, Frey P, Aebi S, Hinds J, Muhlemann K, (2010) Multiple colonization with S. pneumoniae before and after introduction of the seven-valent conjugated pneumococcal polysaccharide vaccine. PLoS One 5: e11638.
-
(2010)
PLoS One
, vol.5
-
-
Brugger, S.D.1
Frey, P.2
Aebi, S.3
Hinds, J.4
Muhlemann, K.5
-
33
-
-
69949111769
-
Burden of disease caused by Streptococcus pneumoniae in children younger than 5 years: global estimates
-
O'Brien KL, Wolfson LJ, Watt JP, Henkle E, Deloria-Knoll M, et al. (2009) Burden of disease caused by Streptococcus pneumoniae in children younger than 5 years: global estimates. Lancet 374: 893-902.
-
(2009)
Lancet
, vol.374
, pp. 893-902
-
-
O'Brien, K.L.1
Wolfson, L.J.2
Watt, J.P.3
Henkle, E.4
Deloria-Knoll, M.5
-
34
-
-
0036047758
-
Large-scale identification of serotype 4 Streptococcus pneumoniae virulence factors
-
Hava DL, Camilli A, (2002) Large-scale identification of serotype 4 Streptococcus pneumoniae virulence factors. Mol Microbiol 45: 1389-1406.
-
(2002)
Mol Microbiol
, vol.45
, pp. 1389-1406
-
-
Hava, D.L.1
Camilli, A.2
-
35
-
-
40949162838
-
The role of Streptococcus pneumoniae virulence factors in host respiratory colonization and disease
-
Kadioglu A, Weiser JN, Paton JC, Andrew PW, (2008) The role of Streptococcus pneumoniae virulence factors in host respiratory colonization and disease. Nat Rev Microbiol 6: 288-301.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 288-301
-
-
Kadioglu, A.1
Weiser, J.N.2
Paton, J.C.3
Andrew, P.W.4
-
36
-
-
33645472239
-
Role of two-component systems in the virulence of Streptococcus pneumoniae
-
Paterson GK, Blue CE, Mitchell TJ, (2006) Role of two-component systems in the virulence of Streptococcus pneumoniae. J Med Microbiol 55: 355-363.
-
(2006)
J Med Microbiol
, vol.55
, pp. 355-363
-
-
Paterson, G.K.1
Blue, C.E.2
Mitchell, T.J.3
-
37
-
-
34548700626
-
Identification of the genes directly controlled by the response regulator CiaR in Streptococcus pneumoniae: five out of 15 promoters drive expression of small non-coding RNAs
-
Halfmann A, Kovacs M, Hakenbeck R, Bruckner R, (2007) Identification of the genes directly controlled by the response regulator CiaR in Streptococcus pneumoniae: five out of 15 promoters drive expression of small non-coding RNAs. Mol Microbiol 66: 110-126.
-
(2007)
Mol Microbiol
, vol.66
, pp. 110-126
-
-
Halfmann, A.1
Kovacs, M.2
Hakenbeck, R.3
Bruckner, R.4
-
38
-
-
78549264826
-
Identification of genes for small non-coding RNAs that belong to the regulon of the two-component regulatory system CiaRH in Streptococcus
-
Marx P, Nuhn M, Kovacs M, Hakenbeck R, Bruckner R, (2010) Identification of genes for small non-coding RNAs that belong to the regulon of the two-component regulatory system CiaRH in Streptococcus. BMC Genomics 11: 661.
-
(2010)
BMC Genomics
, vol.11
, pp. 661
-
-
Marx, P.1
Nuhn, M.2
Kovacs, M.3
Hakenbeck, R.4
Bruckner, R.5
-
39
-
-
84857386433
-
Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae
-
Acebo P, Martin-Galiano AJ, Navarro S, Zaballos A, Amblar M, (2012) Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae. RNA 18: 530-546.
-
(2012)
RNA
, vol.18
, pp. 530-546
-
-
Acebo, P.1
Martin-Galiano, A.J.2
Navarro, S.3
Zaballos, A.4
Amblar, M.5
-
40
-
-
46449092820
-
Convergence of regulatory networks on the pilus locus of Streptococcus pneumoniae
-
Rosch JW, Mann B, Thornton J, Sublett J, Tuomanen E, (2008) Convergence of regulatory networks on the pilus locus of Streptococcus pneumoniae. Infect Immun 76: 3187-3196.
-
(2008)
Infect Immun
, vol.76
, pp. 3187-3196
-
-
Rosch, J.W.1
Mann, B.2
Thornton, J.3
Sublett, J.4
Tuomanen, E.5
-
41
-
-
10044258548
-
Revising the role of the pneumococcal vex-vncRS locus in vancomycin tolerance
-
Haas W, Sublett J, Kaushal D, Tuomanen EI, (2004) Revising the role of the pneumococcal vex-vncRS locus in vancomycin tolerance. J Bacteriol 186: 8463-8471.
-
(2004)
J Bacteriol
, vol.186
, pp. 8463-8471
-
-
Haas, W.1
Sublett, J.2
Kaushal, D.3
Tuomanen, E.I.4
-
42
-
-
84934440865
-
Small RNAs controlled by two-component systems
-
Valverde C, Haas D, (2008) Small RNAs controlled by two-component systems. Adv Exp Med Biol 631: 54-79.
-
(2008)
Adv Exp Med Biol
, vol.631
, pp. 54-79
-
-
Valverde, C.1
Haas, D.2
-
43
-
-
4344682527
-
The small RNA regulators of Escherichia coli: roles and mechanisms*
-
Gottesman S, (2004) The small RNA regulators of Escherichia coli: roles and mechanisms*. Annu Rev Microbiol 58: 303-328.
-
(2004)
Annu Rev Microbiol
, vol.58
, pp. 303-328
-
-
Gottesman, S.1
-
44
-
-
47349123990
-
NrdI essentiality for class Ib ribonucleotide reduction in Streptococcus pyogenes
-
Roca I, Torrents E, Sahlin M, Gibert I, Sjoberg BM, (2008) NrdI essentiality for class Ib ribonucleotide reduction in Streptococcus pyogenes. J Bacteriol 190: 4849-4858.
-
(2008)
J Bacteriol
, vol.190
, pp. 4849-4858
-
-
Roca, I.1
Torrents, E.2
Sahlin, M.3
Gibert, I.4
Sjoberg, B.M.5
-
45
-
-
37749013007
-
Small mobile sequences in bacteria display diverse structure/function motifs
-
Delihas N, (2008) Small mobile sequences in bacteria display diverse structure/function motifs. Mol Microbiol 67: 475-481.
-
(2008)
Mol Microbiol
, vol.67
, pp. 475-481
-
-
Delihas, N.1
-
46
-
-
79951566871
-
Identification, variation and transcription of pneumococcal repeat sequences
-
Croucher NJ, Vernikos GS, Parkhill J, Bentley SD, (2011) Identification, variation and transcription of pneumococcal repeat sequences. BMC Genomics 12: 120.
-
(2011)
BMC Genomics
, vol.12
, pp. 120
-
-
Croucher, N.J.1
Vernikos, G.S.2
Parkhill, J.3
Bentley, S.D.4
-
47
-
-
33751579311
-
BOX elements modulate gene expression in Streptococcus pneumoniae: impact on the fine-tuning of competence development
-
Knutsen E, Johnsborg O, Quentin Y, Claverys JP, Havarstein LS, (2006) BOX elements modulate gene expression in Streptococcus pneumoniae: impact on the fine-tuning of competence development. J Bacteriol 188: 8307-8312.
-
(2006)
J Bacteriol
, vol.188
, pp. 8307-8312
-
-
Knutsen, E.1
Johnsborg, O.2
Quentin, Y.3
Claverys, J.P.4
Havarstein, L.S.5
-
48
-
-
33645765576
-
A Role for the SmpB-SsrA system in Yersinia pseudotuberculosis pathogenesis
-
Okan NA, Bliska JB, Karzai AW, (2006) A Role for the SmpB-SsrA system in Yersinia pseudotuberculosis pathogenesis. PLoS Pathog 2: e6.
-
(2006)
PLoS Pathog
, vol.2
-
-
Okan, N.A.1
Bliska, J.B.2
Karzai, A.W.3
-
49
-
-
77349125807
-
The smpB-ssrA mutant of Yersinia pestis functions as a live attenuated vaccine to protect mice against pulmonary plague infection
-
Okan NA, Mena P, Benach JL, Bliska JB, Karzai AW, (2010) The smpB-ssrA mutant of Yersinia pestis functions as a live attenuated vaccine to protect mice against pulmonary plague infection. Infect Immun 78: 1284-1293.
-
(2010)
Infect Immun
, vol.78
, pp. 1284-1293
-
-
Okan, N.A.1
Mena, P.2
Benach, J.L.3
Bliska, J.B.4
Karzai, A.W.5
-
50
-
-
0242523959
-
A salvage pathway for protein structures: tmRNA and trans-translation
-
Withey JH, Friedman DI, (2003) A salvage pathway for protein structures: tmRNA and trans-translation. Annu Rev Microbiol 57: 101-123.
-
(2003)
Annu Rev Microbiol
, vol.57
, pp. 101-123
-
-
Withey, J.H.1
Friedman, D.I.2
-
51
-
-
0035543152
-
Regulatory roles of the GacS/GacA two-component system in plant-associated and other gram-negative bacteria
-
Heeb S, Haas D, (2001) Regulatory roles of the GacS/GacA two-component system in plant-associated and other gram-negative bacteria. Mol Plant Microbe Interact 14: 1351-1363.
-
(2001)
Mol Plant Microbe Interact
, vol.14
, pp. 1351-1363
-
-
Heeb, S.1
Haas, D.2
-
52
-
-
77955155869
-
Base pairing small RNAs and their roles in global regulatory networks
-
Beisel CL, Storz G, (2010) Base pairing small RNAs and their roles in global regulatory networks. FEMS Microbiol Rev 34: 866-882.
-
(2010)
FEMS Microbiol Rev
, vol.34
, pp. 866-882
-
-
Beisel, C.L.1
Storz, G.2
-
53
-
-
0038187589
-
Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm
-
Repoila F, Majdalani N, Gottesman S, (2003) Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm. Mol Microbiol 48: 855-861.
-
(2003)
Mol Microbiol
, vol.48
, pp. 855-861
-
-
Repoila, F.1
Majdalani, N.2
Gottesman, S.3
-
54
-
-
0344237410
-
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria
-
Vogel J, Bartels V, Tang TH, Churakov G, Slagter-Jager JG, et al. (2003) RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria. Nucleic Acids Res 31: 6435-6443.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6435-6443
-
-
Vogel, J.1
Bartels, V.2
Tang, T.H.3
Churakov, G.4
Slagter-Jager, J.G.5
-
55
-
-
0035919670
-
Complete genome sequence of a virulent isolate of Streptococcus pneumoniae
-
Tettelin H, Nelson KE, Paulsen IT, Eisen JA, Read TD, et al. (2001) Complete genome sequence of a virulent isolate of Streptococcus pneumoniae. Science 293: 498-506.
-
(2001)
Science
, vol.293
, pp. 498-506
-
-
Tettelin, H.1
Nelson, K.E.2
Paulsen, I.T.3
Eisen, J.A.4
Read, T.D.5
-
56
-
-
0000331730
-
A study of the genetic material determining an enzyme in Pneumococcus
-
Lacks S, Hotchkiss RD, (1960) A study of the genetic material determining an enzyme in Pneumococcus. Biochim Biophys Acta 39: 508-518.
-
(1960)
Biochim Biophys Acta
, vol.39
, pp. 508-518
-
-
Lacks, S.1
Hotchkiss, R.D.2
-
57
-
-
77957788941
-
sRNAscanner: a computational tool for intergenic small RNA detection in bacterial genomes
-
Sridhar J, Sambaturu N, Sabarinathan R, Ou HY, Deng Z, et al. (2010) sRNAscanner: a computational tool for intergenic small RNA detection in bacterial genomes. PLoS One 5: e11970.
-
(2010)
PLoS One
, vol.5
-
-
Sridhar, J.1
Sambaturu, N.2
Sabarinathan, R.3
Ou, H.Y.4
Deng, Z.5
-
58
-
-
50849105413
-
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
-
Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, et al. (2008) Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq. PLoS Genet 4: e1000163.
-
(2008)
PLoS Genet
, vol.4
-
-
Sittka, A.1
Lucchini, S.2
Papenfort, K.3
Sharma, C.M.4
Rolle, K.5
-
59
-
-
0842265261
-
Method for introducing specific and unmarked mutations into the chromosome of Streptococcus pneumoniae
-
Iannelli F, Pozzi G, (2004) Method for introducing specific and unmarked mutations into the chromosome of Streptococcus pneumoniae. Mol Biotechnol 26: 81-86.
-
(2004)
Mol Biotechnol
, vol.26
, pp. 81-86
-
-
Iannelli, F.1
Pozzi, G.2
-
60
-
-
4644274689
-
Microarray analysis of pneumococcal gene expression during invasive disease
-
Orihuela CJ, Radin JN, Sublett JE, Gao G, Kaushal D, et al. (2004) Microarray analysis of pneumococcal gene expression during invasive disease. Infect Immun 72: 5582-5596.
-
(2004)
Infect Immun
, vol.72
, pp. 5582-5596
-
-
Orihuela, C.J.1
Radin, J.N.2
Sublett, J.E.3
Gao, G.4
Kaushal, D.5
-
61
-
-
62949119234
-
Role of the manganese efflux system mntE for signalling and pathogenesis in Streptococcus pneumoniae
-
Rosch JW, Gao G, Ridout G, Wang YD, Tuomanen EI, (2009) Role of the manganese efflux system mntE for signalling and pathogenesis in Streptococcus pneumoniae. Mol Microbiol 72: 12-25.
-
(2009)
Mol Microbiol
, vol.72
, pp. 12-25
-
-
Rosch, J.W.1
Gao, G.2
Ridout, G.3
Wang, Y.D.4
Tuomanen, E.I.5
-
62
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M, (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
63
-
-
6944224035
-
Tissue-specific contributions of pneumococcal virulence factors to pathogenesis
-
Orihuela CJ, Gao G, Francis KP, Yu J, Tuomanen EI, (2004) Tissue-specific contributions of pneumococcal virulence factors to pathogenesis. J Infect Dis 190: 1661-1669.
-
(2004)
J Infect Dis
, vol.190
, pp. 1661-1669
-
-
Orihuela, C.J.1
Gao, G.2
Francis, K.P.3
Yu, J.4
Tuomanen, E.I.5
-
64
-
-
46449102700
-
The Streptococcus pneumoniae competence regulatory system influences respiratory tract colonization
-
Kowalko JE, Sebert ME, (2008) The Streptococcus pneumoniae competence regulatory system influences respiratory tract colonization. Infect Immun 76: 3131-3140.
-
(2008)
Infect Immun
, vol.76
, pp. 3131-3140
-
-
Kowalko, J.E.1
Sebert, M.E.2
-
65
-
-
70349611730
-
Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms
-
van Opijnen T, Bodi KL, Camilli A, (2009) Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms. Nat Methods 6: 767-772.
-
(2009)
Nat Methods
, vol.6
, pp. 767-772
-
-
van Opijnen, T.1
Bodi, K.L.2
Camilli, A.3
-
66
-
-
79952276542
-
Genome-wide fitness and genetic interactions determined by Tn-seq, a high-throughput massively parallel sequencing method for microorganisms
-
Opijnen T, Camilli A, (2010) Genome-wide fitness and genetic interactions determined by Tn-seq, a high-throughput massively parallel sequencing method for microorganisms. Curr Protoc Microbiol Chapter 1: Unit1E 3.
-
(2010)
Curr Protoc Microbiol Chapter 1: Unit1E 3
-
-
Opijnen, T.1
Camilli, A.2
-
67
-
-
33745267732
-
Effects of random mutations in the human immunodeficiency virus type 1 transcriptional promoter on viral fitness in different host cell environments
-
van Opijnen T, Boerlijst MC, Berkhout B, (2006) Effects of random mutations in the human immunodeficiency virus type 1 transcriptional promoter on viral fitness in different host cell environments. J Virol 80: 6678-6685.
-
(2006)
J Virol
, vol.80
, pp. 6678-6685
-
-
van Opijnen, T.1
Boerlijst, M.C.2
Berkhout, B.3
|