-
1
-
-
1842613501
-
Regulation of endospore formation in Bacillus subtilis
-
Errington J. Regulation of endospore formation in Bacillus subtilis. Nature Rev Microbiol 2003; 1:117-26.
-
(2003)
Nature Rev Microbiol
, vol.1
, pp. 117-126
-
-
Errington, J.1
-
2
-
-
8844240734
-
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis
-
Eichenberger P, Fujita M, Jensen ST, Conlon EM, Rudner DZ, Wang ST, et al. The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis. PLoS Biol 2004; 2:1664-83.
-
(2004)
PLoS Biol
, vol.2
, pp. 1664-1683
-
-
Eichenberger, P.1
Fujita, M.2
Jensen, S.T.3
Conlon, E.M.4
Rudner, D.Z.5
Wang, S.T.6
-
3
-
-
14044268828
-
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis
-
DOI 10.1099/mic.0.27493-0
-
Steil L, Serrano M, Henriques AO, Völker U. Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis. Microbiology 2005; 151:399-420. (Pubitemid 40277744)
-
(2005)
Microbiology
, vol.151
, Issue.2
, pp. 399-420
-
-
Steil, L.1
Serrano, M.2
Henriques, A.O.3
Volker, U.4
-
4
-
-
33645097172
-
The forespore line of gene expression in Bacillus subtilis
-
Wang ST, Setlow B, Conlon EM, Lyon JL, Imamura D, Sato T, et al. The forespore line of gene expression in Bacillus subtilis. J Mol Biol 2006; 358:16-37.
-
(2006)
J Mol Biol
, vol.358
, pp. 16-37
-
-
Wang, S.T.1
Setlow, B.2
Conlon, E.M.3
Lyon, J.L.4
Imamura, D.5
Sato, T.6
-
5
-
-
2942616403
-
Compartmentalization of gene expression during Bacillus subtilis spore formation
-
Hilbert DW, Piggot PJ. Compartmentalization of gene expression during Bacillus subtilis spore formation. Microbiol Mol Biol Rev 2004; 68:234-62.
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 234-262
-
-
Hilbert, D.W.1
Piggot, P.J.2
-
6
-
-
30544443489
-
A comparative genomic view of clostridial sporulation and physiology
-
DOI 10.1038/nrmicro1288, PII N1288
-
Paredes CJ, Alsaker KV, Papoutsakis ET. A comparative genomic view of clostridial sporulation and physiology. Nature Rev Microbiol 2005; 3:969-78. (Pubitemid 43078160)
-
(2005)
Nature Reviews Microbiology
, vol.3
, Issue.12
, pp. 969-978
-
-
Paredes, C.J.1
Alsaker, K.V.2
Papoutsakis, E.T.3
-
7
-
-
0002572455
-
A gene odyssey: Exploring the genomes of endospore-forming bacteria
-
Sonenshein AL, Hoch JA, Losick R, Eds. Washington, DC: ASM Press
-
Stragier P. A gene odyssey: exploring the genomes of endospore-forming bacteria. In: Sonenshein AL, Hoch JA, Losick R, Eds. Bacillus subtilis and its Closest Relatives: From Genes to Cells. Washington, DC: ASM Press 2002; 519-26.
-
(2002)
Bacillus Subtilis and Its Closest Relatives: From Genes to Cells
, pp. 519-526
-
-
Stragier, P.1
-
8
-
-
34247169597
-
CsrB sRNA family: sequestration of RNA-binding regulatory proteins
-
DOI 10.1016/j.mib.2007.03.007, PII S1369527407000240, Cell Regulation (RNA Special Issue)
-
Babitzke P, Romeo T. CsrB sRNA family: sequestration of RNA-binding regulatory proteins. Curr Opin Microbiol 2007; 10:156-63. (Pubitemid 46590047)
-
(2007)
Current Opinion in Microbiology
, vol.10
, Issue.2
, pp. 156-163
-
-
Babitzke, P.1
Romeo, T.2
-
9
-
-
77953033074
-
Adaptive evolution of an sRNA that controls Myxococcus development
-
Yu YTN, Yuan X, Velicer GJ. Adaptive evolution of an sRNA that controls Myxococcus development. Science 2010; 328:993.
-
(2010)
Science
, vol.328
, pp. 993
-
-
Yu, Y.T.N.1
Yuan, X.2
Velicer, G.J.3
-
10
-
-
34247101054
-
Small noncoding RNAs controlling pathogenesis
-
DOI 10.1016/j.mib.2007.03.004, PII S1369527407000215, Cell Regulation (RNA Special Issue)
-
Toledo-Arana A, Repoila F, Cossart P. Small non-coding RNAs controlling pathogenesis. Curr Opin Microbiol 2007; 10:182-8. (Pubitemid 46590044)
-
(2007)
Current Opinion in Microbiology
, vol.10
, Issue.2
, pp. 182-188
-
-
Toledo-Arana, A.1
Repoila, F.2
Cossart, P.3
-
11
-
-
30744439103
-
Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis
-
DOI 10.1128/JB.188.2.532-541.2006
-
Silvaggi JM, Perkins JB, Losick R. Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis. J Bacteriol 2006; 188:532-41. (Pubitemid 43100542)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.2
, pp. 532-541
-
-
Silvaggi, J.M.1
Perkins, J.B.2
Losick, R.3
-
12
-
-
77957832370
-
Small genes under sporulation control in the Bacillus subtilis genome
-
Schmalisch M, Maiques E, Nikolov L, Camp AH, Chevreux B, Muffler A, et al. Small genes under sporulation control in the Bacillus subtilis genome. J Bacteriol 2010; 192:5402-12.
-
(2010)
J Bacteriol
, vol.192
, pp. 5402-5412
-
-
Schmalisch, M.1
Maiques, E.2
Nikolov, L.3
Camp, A.H.4
Chevreux, B.5
Muffler, A.6
-
13
-
-
56949094523
-
Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis
-
Saito S, Kakeshita H, Nakamura K. Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis. Gene 2009; 428:2-8.
-
(2009)
Gene
, vol.428
, pp. 2-8
-
-
Saito, S.1
Kakeshita, H.2
Nakamura, K.3
-
14
-
-
70350159135
-
The transcriptionally active regions in the genome of Bacillus subtilis
-
Rasmussen S, Nielsen HB, Jarmer H. The transcriptionally active regions in the genome of Bacillus subtilis. Mol Microbiol 2009; 73:1043-57.
-
(2009)
Mol Microbiol
, vol.73
, pp. 1043-1057
-
-
Rasmussen, S.1
Nielsen, H.B.2
Jarmer, H.3
-
15
-
-
66449091512
-
Single-pass classification of all noncoding sequences in a bacterial genome using phylogenetic profiles
-
Marchais A, Naville M, Bohn C, Bouloc P, Gautheret D. Single-pass classification of all noncoding sequences in a bacterial genome using phylogenetic profiles. Genome Res 2009; 19:1084-92.
-
(2009)
Genome Res
, vol.19
, pp. 1084-1092
-
-
Marchais, A.1
Naville, M.2
Bohn, C.3
Bouloc, P.4
Gautheret, D.5
-
16
-
-
2342511433
-
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control
-
DOI 10.1073/pnas.0308014101
-
Barrick JE, Corbino KA, Winkler WC, Nahvi A, Mandal M, Collins J, et al. New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control. Proc Natl Acad Sci USA 2004; 101:6421-6. (Pubitemid 38585989)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.17
, pp. 6421-6426
-
-
Barrick, J.E.1
Corbino, K.A.2
Winkler, W.C.3
Nahvi, A.4
Mandal, M.5
Collins, J.6
Lee, M.7
Roth, A.8
Sudarsan, N.9
Jona, I.10
Wickiser, J.K.11
Breaker, R.R.12
-
17
-
-
0032514643
-
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple loci
-
Lease RA, Cusick ME, Belfort M. Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple loci. Proc Natl Acad Sci USA 1998; 95:12456-61.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 12456-12461
-
-
Lease, R.A.1
Cusick, M.E.2
Belfort, M.3
-
18
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990; 215:403-10.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
19
-
-
34247598415
-
Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering
-
Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R. Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering. PLoS Comput Biol 2007; 3:65.
-
(2007)
PLoS Comput Biol
, vol.3
, pp. 65
-
-
Will, S.1
Reiche, K.2
Hofacker, I.L.3
Stadler, P.F.4
Backofen, R.5
-
20
-
-
13444309635
-
RALEE - RNA alignment editor in Emacs
-
DOI 10.1093/bioinformatics/bth489
-
Griffiths-Jones S. RALEE - RNA ALignment Editor in Emacs. Bioinformatics 2005; 21:257-9. (Pubitemid 40202027)
-
(2005)
Bioinformatics
, vol.21
, Issue.2
, pp. 257-259
-
-
Griffiths-Jones, S.1
-
21
-
-
67650727366
-
VARNA: Interactive drawing and editing of the RNA secondary structure
-
Darty K, Denise A, Ponty Y. VARNA: Interactive drawing and editing of the RNA secondary structure. Bioinformatics 2009; 25:1974-5.
-
(2009)
Bioinformatics
, vol.25
, pp. 1974-1975
-
-
Darty, K.1
Denise, A.2
Ponty, Y.3
-
22
-
-
58149191274
-
Rfam: Updates to the RNA families database
-
Gardner PP, Daub J, Tate JG, Nawrocki EP, Kolbe DL, Lindgreen S, et al. Rfam: updates to the RNA families database. Nucleic Acids Res 2009; 7:136-40.
-
(2009)
Nucleic Acids Res
, vol.7
, pp. 136-140
-
-
Gardner, P.P.1
Daub, J.2
Tate, J.G.3
Nawrocki, E.P.4
Kolbe, D.L.5
Lindgreen, S.6
-
24
-
-
0030597337
-
Plasmids for ectopic integration in Bacillus subtilis
-
Guérout-Fleury AM, Frandsen N, Stragier P. Plasmids for ectopic integration in Bacillus subtilis. Gene 1996; 180:57-61.
-
(1996)
Gene
, vol.180
, pp. 57-61
-
-
Guérout-Fleury, A.M.1
Frandsen, N.2
Stragier, P.3
-
25
-
-
58249094402
-
Analysis of mRNA decay in Bacillus subtilis
-
Bechhofer DH, Oussenko I, Yao S, Mathy N, Condon C. Analysis of mRNA decay in Bacillus subtilis. Methods in Enzymology 2008; 447:259-76.
-
(2008)
Methods in Enzymology
, vol.447
, pp. 259-276
-
-
Bechhofer, D.H.1
Oussenko, I.2
Yao, S.3
Mathy, N.4
Condon, C.5
-
26
-
-
4944264194
-
GadY, a small-RNA regulator of acid response genes in Escherichia coli
-
DOI 10.1128/JB.186.20.6698-6705.2004
-
Opdyke JA, Kang JG, Storz G. GadY, a small-RNA regulator of acid response genes in Escherichia coli. J Bacteriol 2004; 186:6698-705. (Pubitemid 39332106)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.20
, pp. 6698-6705
-
-
Opdyke, J.A.1
Kang, J.-G.2
Storz, G.3
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