-
1
-
-
0032004388
-
2'-Deoxynucleoside 5'-triphosphates modified at alpha-, beta- and gamma-phosphates as substrates for DNA polymerases
-
doi: 10.1093/nar/26.3.778
-
Alexandrova, L. A., Skoblov, A. Y., Jasko, M. V., Victorova, L. S., and Krayevsky, A. A. (1998). 2'-Deoxynucleoside 5'-triphosphates modified at alpha-, beta- and gamma-phosphates as substrates for DNA polymerases. Nucleic Acids Res. 26, 778-786. doi: 10.1093/nar/26.3.778
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 778-786
-
-
Alexandrova, L.A.1
Skoblov, A.Y.2
Jasko, M.V.3
Victorova, L.S.4
Krayevsky, A.A.5
-
2
-
-
0036387195
-
Efficient and high fidelity incorporation of dye-terminators by a novel archaeal DNA polymerase mutant
-
doi: 10.1016/S0022-2836(02)00843-4
-
Arezi, B., Hansen, C. J., and Hogrefe, H. H. (2002). Efficient and high fidelity incorporation of dye-terminators by a novel archaeal DNA polymerase mutant. J. Mol. Biol. 322, 719-729. doi: 10.1016/S0022-2836(02)00843-4
-
(2002)
J. Mol. Biol.
, vol.322
, pp. 719-729
-
-
Arezi, B.1
Hansen, C.J.2
Hogrefe, H.H.3
-
3
-
-
0029763197
-
Gamma-phosphate-substituted 2'-deoxynucleoside 5'-triphosphates as substrates for DNA polymerases
-
doi: 10.1074/jbc.271.40.24389
-
Arzumanov, A. A., Semizarov, D. G., Victorova, L. S., Dyatkina, N. B., and Krayevsky, A. A. (1996). Gamma-phosphate-substituted 2'-deoxynucleoside 5'-triphosphates as substrates for DNA polymerases. J. Biol. Chem. 271, 24389-24394. doi: 10.1074/jbc.271.40.24389
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 24389-24394
-
-
Arzumanov, A.A.1
Semizarov, D.G.2
Victorova, L.S.3
Dyatkina, N.B.4
Krayevsky, A.A.5
-
4
-
-
0014619339
-
Enzymatic synthesis of deoxyribonucleic acid. XXXIV. Termination of chain growth by a 2',3'-dideoxyribonucleotide
-
doi: 10.1021/bi00840a037
-
Atkinson, M. R., Deutscher, M. P., Kornberg, A., Russell, A. F., and Moffatt, J. G. (1969). Enzymatic synthesis of deoxyribonucleic acid. XXXIV. Termination of chain growth by a 2',3'-dideoxyribonucleotide. Biochemistry 8, 4897-4904. doi: 10.1021/bi00840a037
-
(1969)
Biochemistry
, vol.8
, pp. 4897-4904
-
-
Atkinson, M.R.1
Deutscher, M.P.2
Kornberg, A.3
Russell, A.F.4
Moffatt, J.G.5
-
5
-
-
55549089660
-
Accurate whole human genome sequencing using reversible terminator chemistry
-
doi: 10.1038/nature07517
-
Bentley, D. R., Balasubramanian, S., Swerdlow, H. P., Smith, G. P., Milton, J., Brown, C. G., et al. (2008). Accurate whole human genome sequencing using reversible terminator chemistry. Nature 456, 53-59. doi: 10.1038/nature07517
-
(2008)
Nature
, vol.456
, pp. 53-59
-
-
Bentley, D.R.1
Balasubramanian, S.2
Swerdlow, H.P.3
Smith, G.P.4
Milton, J.5
Brown, C.G.6
-
6
-
-
33749534161
-
Telomeres and telomerase: the path from maize, Tetrahymena and yeast to human cancer and aging
-
doi: 10.1038/nm1006-1133
-
Blackburn, E. H., Greider, C. W., and Szostak, J. W. (2006). Telomeres and telomerase: the path from maize, Tetrahymena and yeast to human cancer and aging. Nat. Med. 12, 1133-1138. doi: 10.1038/nm1006-1133
-
(2006)
Nat. Med.
, vol.12
, pp. 1133-1138
-
-
Blackburn, E.H.1
Greider, C.W.2
Szostak, J.W.3
-
7
-
-
0009749157
-
Replication of phage phi 29 DNA with purified terminal protein and DNA polymerase: synthesis of full-length phi 29 DNA
-
doi: 10.1073/pnas.82.19.6404
-
Blanco, L., and Salas, M. (1985). Replication of phage phi 29 DNA with purified terminal protein and DNA polymerase: synthesis of full-length phi 29 DNA. Proc. Natl. Acad. Sci. U.S.A. 82, 6404-6408. doi: 10.1073/pnas.82.19.6404
-
(1985)
Proc. Natl. Acad. Sci. U.S.A.
, vol.82
, pp. 6404-6408
-
-
Blanco, L.1
Salas, M.2
-
8
-
-
0030836866
-
Fidelity of Escherichia coli DNA polymerase III holoenzyme. The effects of beta, gamma complex processivity proteins and epsilon proofreading exonuclease on nucleotide misincorporation efficiencies
-
doi: 10.1074/jbc.272.44.27919
-
Bloom, L. B., Chen, X., Fygenson, D. K., Turner, J., O'Donnell, M., and Goodman, M. F. (1997). Fidelity of Escherichia coli DNA polymerase III holoenzyme. The effects of beta, gamma complex processivity proteins and epsilon proofreading exonuclease on nucleotide misincorporation efficiencies. J. Biol. Chem. 272, 27919-27930. doi: 10.1074/jbc.272.44.27919
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 27919-27930
-
-
Bloom, L.B.1
Chen, X.2
Fygenson, D.K.3
Turner, J.4
O'Donnell, M.5
Goodman, M.F.6
-
9
-
-
0030051173
-
Slow rate of phosphodiester bond formation accounts for the strong bias that Taq DNA polymerase shows against 2',3'-dideoxynucleotide terminators
-
doi: 10.1021/bi951682j
-
Brandis, J. W., Edwards, S. G., and Johnson, K. A. (1996). Slow rate of phosphodiester bond formation accounts for the strong bias that Taq DNA polymerase shows against 2',3'-dideoxynucleotide terminators. Biochemistry 35, 2189-2200. doi: 10.1021/bi951682j
-
(1996)
Biochemistry
, vol.35
, pp. 2189-2200
-
-
Brandis, J.W.1
Edwards, S.G.2
Johnson, K.A.3
-
10
-
-
78650647927
-
Pre-steady-state kinetic analysis of the incorporation of anti-HIV nucleotide analogs catalyzed by human X- and Y-family DNA polymerases
-
doi: 10.1128/AAC.01229-10
-
Brown, J. A., Pack, L. R., Fowler, J. D., and Suo, Z. (2011a). Pre-steady-state kinetic analysis of the incorporation of anti-HIV nucleotide analogs catalyzed by human X- and Y-family DNA polymerases. Antimicrob. Agents Chemother. 55, 276-283. doi: 10.1128/AAC.01229-10
-
(2011)
Antimicrob. Agents Chemother.
, vol.55
, pp. 276-283
-
-
Brown, J.A.1
Pack, L.R.2
Fowler, J.D.3
Suo, Z.4
-
11
-
-
78650415862
-
Efficiency and fidelity of human DNA polymerases lambda and beta during gap-filling DNA synthesis
-
doi: 10.1016/j.dnarep.2010.09.005
-
Brown, J. A., Pack, L. R., Sanman, L. E., and Suo, Z. (2011b). Efficiency and fidelity of human DNA polymerases lambda and beta during gap-filling DNA synthesis. DNA Repair (Amst.) 10, 24-33. doi: 10.1016/j.dnarep.2010.09.005
-
(2011)
DNA Repair (Amst.)
, vol.10
, pp. 24-33
-
-
Brown, J.A.1
Pack, L.R.2
Sanman, L.E.3
Suo, Z.4
-
12
-
-
0035941229
-
Eukaryotic DNA polymerases: proposal for a revised nomenclature
-
doi: 10.1074/jbc.R100056200
-
Burgers, P. M., Koonin, E. V., Bruford, E., Blanco, L., Burtis, K. C., Christman, M. F., et al. (2001). Eukaryotic DNA polymerases: proposal for a revised nomenclature. J. Biol. Chem. 276, 43487-43490. doi: 10.1074/jbc.R100056200
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 43487-43490
-
-
Burgers, P.M.1
Koonin, E.V.2
Bruford, E.3
Blanco, L.4
Burtis, K.C.5
Christman, M.F.6
-
13
-
-
84875375761
-
The history and advances of reversible terminators used in new generations of sequencing technology
-
doi: 10.1016/j.gpb.2013.01.003
-
Chen, F., Dong, M., Ge, M., Zhu, L., Ren, L., Liu, G., et al. (2013a). The history and advances of reversible terminators used in new generations of sequencing technology. Genomics Proteomics Bioinformatics 11, 34-40. doi: 10.1016/j.gpb.2013.01.003
-
(2013)
Genomics Proteomics Bioinformatics
, vol.11
, pp. 34-40
-
-
Chen, F.1
Dong, M.2
Ge, M.3
Zhu, L.4
Ren, L.5
Liu, G.6
-
14
-
-
84878923572
-
DNA sequencing using electrical conductance measurements of a DNA polymerase
-
doi: 10.1038/nnano.2013.71
-
Chen, Y. S., Lee, C. H., Hung, M. Y., Pan, H. A., Chiou, J. C., and Huang, G. S. (2013b). DNA sequencing using electrical conductance measurements of a DNA polymerase. Nat. Nanotechnol. 8, 452-458. doi: 10.1038/nnano.2013.71
-
(2013)
Nat. Nanotechnol.
, vol.8
, pp. 452-458
-
-
Chen, Y.S.1
Lee, C.H.2
Hung, M.Y.3
Pan, H.A.4
Chiou, J.C.5
Huang, G.S.6
-
15
-
-
76649090003
-
Reconstructed evolutionary adaptive paths give polymerases accepting reversible terminators for sequencing and SNP detection
-
doi: 10.1073/pnas.0908463107
-
Chen, F., Gaucher, E. A., Leal, N. A., Hutter, D., Havemann, S. A., Govindarajan, S., et al. (2010). Reconstructed evolutionary adaptive paths give polymerases accepting reversible terminators for sequencing and SNP detection. Proc. Natl. Acad. Sci. U.S.A. 107, 1948-1953. doi: 10.1073/pnas.0908463107
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 1948-1953
-
-
Chen, F.1
Gaucher, E.A.2
Leal, N.A.3
Hutter, D.4
Havemann, S.A.5
Govindarajan, S.6
-
16
-
-
0016221288
-
Terminal deoxynucleotidyl transferase and DNA polymerase in classes of cells from rat thymus
-
doi: 10.1016/S0006-291X(74)80257-3
-
Coleman, M. S., Hutton, J. J., and Bollum, F. J. (1974). Terminal deoxynucleotidyl transferase and DNA polymerase in classes of cells from rat thymus. Biochem. Biophys. Res. Commun. 58, 1104-1109. doi: 10.1016/S0006-291X(74)80257-3
-
(1974)
Biochem. Biophys. Res. Commun.
, vol.58
, pp. 1104-1109
-
-
Coleman, M.S.1
Hutton, J.J.2
Bollum, F.J.3
-
17
-
-
84877977688
-
Archaeal DNA polymerase D but not DNA polymerase B is required for genome replication in Thermococcus kodakarensis
-
doi: 10.1128/JB.02037-12
-
Cubonova, L., Richardson, T., Burkhart, B. W., Kelman, Z., Connolly, B. A., Reeve, J. N., et al. (2013). Archaeal DNA polymerase D but not DNA polymerase B is required for genome replication in Thermococcus kodakarensis. J. Bacteriol. 195, 2322-2328. doi: 10.1128/JB.02037-12
-
(2013)
J. Bacteriol.
, vol.195
, pp. 2322-2328
-
-
Cubonova, L.1
Richardson, T.2
Burkhart, B.W.3
Kelman, Z.4
Connolly, B.A.5
Reeve, J.N.6
-
18
-
-
84859198102
-
Single-molecule mechanical identification and sequencing
-
doi: 10.1038/nmeth.1925
-
Ding, F., Manosas, M., Spiering, M. M., Benkovic, S. J., Bensimon, D., Allemand, J. F., et al. (2012). Single-molecule mechanical identification and sequencing. Nat. Methods 9, 367-372. doi: 10.1038/nmeth.1925
-
(2012)
Nat. Methods
, vol.9
, pp. 367-372
-
-
Ding, F.1
Manosas, M.2
Spiering, M.M.3
Benkovic, S.J.4
Bensimon, D.5
Allemand, J.F.6
-
19
-
-
0025963376
-
Kinetic partitioning between the exonuclease and polymerase sites in DNA error correction
-
doi: 10.1021/bi00216a031
-
Donlin, M. J., Patel, S. S., and Johnson, K. A. (1991). Kinetic partitioning between the exonuclease and polymerase sites in DNA error correction. Biochemistry 30, 538-546. doi: 10.1021/bi00216a031
-
(1991)
Biochemistry
, vol.30
, pp. 538-546
-
-
Donlin, M.J.1
Patel, S.S.2
Johnson, K.A.3
-
20
-
-
0034671511
-
How Capillary Electrophoresis Sequenced the Human Genome This Essay is based on a lecture given at the Analytica 2000 conference in Munich (Germany) on the occasion of the Heinrich-Emanuel-Merck Prize presentation
-
doi: 10.1002/1521-3773(20001215)39:24<4463::AID-ANIE4463>3.0.CO;2-8
-
Dovichi, N. J., and Zhang, J. (2000). How Capillary Electrophoresis Sequenced the Human Genome This Essay is based on a lecture given at the Analytica 2000 conference in Munich (Germany) on the occasion of the Heinrich-Emanuel-Merck Prize presentation. Angew. Chem. Int. Ed. Engl. 39, 4463-4468. doi: 10.1002/1521-3773(20001215)39:24<4463::AID-ANIE4463>3.0.CO;2-8
-
(2000)
Angew. Chem. Int. Ed. Engl.
, vol.39
, pp. 4463-4468
-
-
Dovichi, N.J.1
Zhang, J.2
-
21
-
-
74949138753
-
Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays
-
doi: 10.1126/science.1181498
-
Drmanac, R., Sparks, A. B., Callow, M. J., Halpern, A. L., Burns, N. L., Kermani, B. G., et al. (2010). Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays. Science 327, 78-81. doi: 10.1126/science.1181498
-
(2010)
Science
, vol.327
, pp. 78-81
-
-
Drmanac, R.1
Sparks, A.B.2
Callow, M.J.3
Halpern, A.L.4
Burns, N.L.5
Kermani, B.G.6
-
22
-
-
0025422537
-
High-speed separations of DNA sequencing reactions by capillary electrophoresis
-
doi: 10.1021/ac00208a003
-
Drossman, H., Luckey, J. A., Kostichka, A. J., D'Cunha, J., and Smith, L. M. (1990). High-speed separations of DNA sequencing reactions by capillary electrophoresis. Anal. Chem. 62, 900-903. doi: 10.1021/ac00208a003
-
(1990)
Anal. Chem.
, vol.62
, pp. 900-903
-
-
Drossman, H.1
Luckey, J.A.2
Kostichka, A.J.3
D'Cunha, J.4
Smith, L.M.5
-
23
-
-
58149234737
-
Real-time DNA sequencing from single polymerase molecules
-
doi: 10.1126/science.1162986
-
Eid, J., Fehr, A., Gray, J., Luong, K., Lyle, J., Otto, G., et al. (2009). Real-time DNA sequencing from single polymerase molecules. Science 323, 133-138. doi: 10.1126/science.1162986
-
(2009)
Science
, vol.323
, pp. 133-138
-
-
Eid, J.1
Fehr, A.2
Gray, J.3
Luong, K.4
Lyle, J.5
Otto, G.6
-
24
-
-
0033564079
-
Determinants of nucleotide sugar recognition in an archaeon DNA polymerase
-
doi: 10.1093/nar/27.12.2545
-
Gardner, A. F., and Jack, W. E. (1999). Determinants of nucleotide sugar recognition in an archaeon DNA polymerase. Nucleic Acids Res. 27, 2545-2553. doi: 10.1093/nar/27.12.2545
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 2545-2553
-
-
Gardner, A.F.1
Jack, W.E.2
-
25
-
-
0037079661
-
Acyclic and dideoxy terminator preferences denote divergent sugar recognition by archaeon and Taq DNA polymerases
-
doi: 10.1093/nar/30.2.605
-
Gardner, A. F., and Jack, W. E. (2002). Acyclic and dideoxy terminator preferences denote divergent sugar recognition by archaeon and Taq DNA polymerases. Nucleic Acids Res. 30, 605-613. doi: 10.1093/nar/30.2.605
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 605-613
-
-
Gardner, A.F.1
Jack, W.E.2
-
26
-
-
1642523632
-
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase
-
doi: 10.1074/jbc.M308286200
-
Gardner, A. F., Joyce, C. M., and Jack, W. E. (2004). Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. J. Biol. Chem. 279, 11834-11842. doi: 10.1074/jbc.M308286200
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 11834-11842
-
-
Gardner, A.F.1
Joyce, C.M.2
Jack, W.E.3
-
27
-
-
84867300971
-
Rapid incorporation kinetics and improved fidelity of a novel class of 3'-OH unblocked reversible terminators
-
doi: 10.1093/nar/gks330
-
Gardner, A. F., Wang, J., Wu, W., Karouby, J., Li, H., Stupi, B. P., et al. (2012). Rapid incorporation kinetics and improved fidelity of a novel class of 3'-OH unblocked reversible terminators. Nucleic Acids Res. 40, 7404-7415. doi: 10.1093/nar/gks330
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 7404-7415
-
-
Gardner, A.F.1
Wang, J.2
Wu, W.3
Karouby, J.4
Li, H.5
Stupi, B.P.6
-
28
-
-
0015736571
-
Further genetic and enzymological characterization of the three Bacillus subtilis deoxyribonucleic acid polymerases
-
Gass, K. B., and Cozzarelli, N. R. (1973). Further genetic and enzymological characterization of the three Bacillus subtilis deoxyribonucleic acid polymerases. J. Biol. Chem. 248, 7688-7700.
-
(1973)
J. Biol. Chem.
, vol.248
, pp. 7688-7700
-
-
Gass, K.B.1
Cozzarelli, N.R.2
-
29
-
-
0016000815
-
Bacillus subtilis DNA polymerases
-
doi: 10.1016/0076-6879(74)29006-2
-
Gass, K. B., and Cozzarelli, N. R. (1974). Bacillus subtilis DNA polymerases. Methods Enzymol. 29, 27-38. doi: 10.1016/0076-6879(74)29006-2
-
(1974)
Methods Enzymol.
, vol.29
, pp. 27-38
-
-
Gass, K.B.1
Cozzarelli, N.R.2
-
30
-
-
0015163962
-
Analysis of DNA polymerases II and 3 in mutants of Escherichia coli thermosensitive for DNA synthesis
-
doi: 10.1073/pnas.68.12.3150
-
Gefter, M. L., Hirota, Y., Kornberg, T., Wechsler, J. A., and Barnoux, C. (1971). Analysis of DNA polymerases II and 3 in mutants of Escherichia coli thermosensitive for DNA synthesis. Proc. Natl. Acad. Sci. U.S.A. 68, 3150-3153. doi: 10.1073/pnas.68.12.3150
-
(1971)
Proc. Natl. Acad. Sci. U.S.A.
, vol.68
, pp. 3150-3153
-
-
Gefter, M.L.1
Hirota, Y.2
Kornberg, T.3
Wechsler, J.A.4
Barnoux, C.5
-
31
-
-
84903200167
-
Characterization of Family D DNA polymerase from Thermococcus sp. 9 degrees N
-
doi: 10.1007/s00792-014-0646-9 [Epub ahead of print].
-
Greenough, L., Menin, J. F., Desai, N. S., Kelman, Z., and Gardner, A. F. (2014). Characterization of Family D DNA polymerase from Thermococcus sp. 9 degrees N. Extremophiles doi: 10.1007/s00792-014-0646-9 [Epub ahead of print].
-
(2014)
Extremophiles
-
-
Greenough, L.1
Menin, J.F.2
Desai, N.S.3
Kelman, Z.4
Gardner, A.F.5
-
32
-
-
48249132489
-
Four-color DNA sequencing with 3'-O-modified nucleotide reversible terminators and chemically cleavable fluorescent dideoxynucleotides
-
doi: 10.1073/pnas.0804023105
-
Guo, J., Xu, N., Li, Z., Zhang, S., Wu, J., Kim, D. H., et al. (2008). Four-color DNA sequencing with 3'-O-modified nucleotide reversible terminators and chemically cleavable fluorescent dideoxynucleotides. Proc. Natl. Acad. Sci. U.S.A. 105, 9145-9150. doi: 10.1073/pnas.0804023105
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 9145-9150
-
-
Guo, J.1
Xu, N.2
Li, Z.3
Zhang, S.4
Wu, J.5
Kim, D.H.6
-
33
-
-
77951239240
-
An integrated system for DNA sequencing by synthesis using novel nucleotide analogues
-
doi: 10.1021/ar900255c
-
Guo, J., Yu, L., Turro, N. J., and Ju, J. (2010). An integrated system for DNA sequencing by synthesis using novel nucleotide analogues. Acc. Chem. Res. 43, 551-563. doi: 10.1021/ar900255c
-
(2010)
Acc. Chem. Res.
, vol.43
, pp. 551-563
-
-
Guo, J.1
Yu, L.2
Turro, N.J.3
Ju, J.4
-
34
-
-
20444377771
-
The hyperthermophilic euryarchaeota Pyrococcus abyssi likely requires the two DNA polymerases D and B for DNA replication
-
doi: 10.1016/j.jmb.2005.04.042
-
Henneke, G., Flament, D., Hubscher, U., Querellou, J., and Raffin, J. P. (2005). The hyperthermophilic euryarchaeota Pyrococcus abyssi likely requires the two DNA polymerases D and B for DNA replication. J. Mol. Biol. 350, 53-64. doi: 10.1016/j.jmb.2005.04.042
-
(2005)
J. Mol. Biol.
, vol.350
, pp. 53-64
-
-
Henneke, G.1
Flament, D.2
Hubscher, U.3
Querellou, J.4
Raffin, J.P.5
-
35
-
-
0027051618
-
Protein splicing removes intervening sequences in an archaea DNA polymerase
-
doi: 10.1093/nar/20.23.6153
-
Hodges, R. A., Perler, F. B., Noren, C. J., and Jack, W. E. (1992). Protein splicing removes intervening sequences in an archaea DNA polymerase. Nucleic Acids Res. 20, 6153-6157. doi: 10.1093/nar/20.23.6153
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 6153-6157
-
-
Hodges, R.A.1
Perler, F.B.2
Noren, C.J.3
Jack, W.E.4
-
36
-
-
84979870743
-
-
Singapore: World Scientific Publishing Co. Pte. Ltd.
-
Hübscher, U., Spadari, S., Villani, G., and Giovanni, M. (2010). DNA Polymerases: Discovery, Characterization and Functions in Cellular DNA Transactions. Singapore: World Scientific Publishing Co. Pte. Ltd.
-
(2010)
DNA Polymerases: Discovery, Characterization and Functions in Cellular DNA Transactions
-
-
Hübscher, U.1
Spadari, S.2
Villani, G.3
Giovanni, M.4
-
37
-
-
78650003339
-
Labeled nucleoside triphosphates with reversibly terminating aminoalkoxyl groups
-
doi: 10.1080/15257770.2010.536191
-
Hutter, D., Kim, M. J., Karalkar, N., Leal, N. A., Chen, F., Guggenheim, E., et al. (2010). Labeled nucleoside triphosphates with reversibly terminating aminoalkoxyl groups. Nucleosides Nucleotides Nucleic Acids 29, 879-895. doi: 10.1080/15257770.2010.536191
-
(2010)
Nucleosides Nucleotides Nucleic Acids
, vol.29
, pp. 879-895
-
-
Hutter, D.1
Kim, M.J.2
Karalkar, N.3
Leal, N.A.4
Chen, F.5
Guggenheim, E.6
-
38
-
-
0001040973
-
DNA sequencing with Thermus aquaticus DNA polymerase and direct sequencing of polymerase chain reaction-amplified DNA
-
doi: 10.1073/pnas.85.24.9436
-
Innis, M. A., Myambo, K. B., Gelfand, D. H., and Brow, M. A. (1988). DNA sequencing with Thermus aquaticus DNA polymerase and direct sequencing of polymerase chain reaction-amplified DNA. Proc. Natl. Acad. Sci. U.S.A. 85, 9436-9440. doi: 10.1073/pnas.85.24.9436
-
(1988)
Proc. Natl. Acad. Sci. U.S.A.
, vol.85
, pp. 9436-9440
-
-
Innis, M.A.1
Myambo, K.B.2
Gelfand, D.H.3
Brow, M.A.4
-
39
-
-
22244478079
-
Cellular DNA replicases: components and dynamics at the replication fork
-
doi: 10.1146/annurev.biochem.73.011303.073859
-
Johnson, A., and O'Donnell, M. (2005). Cellular DNA replicases: components and dynamics at the replication fork. Annu. Rev. Biochem. 74, 283-315. doi: 10.1146/annurev.biochem.73.011303.073859
-
(2005)
Annu. Rev. Biochem.
, vol.74
, pp. 283-315
-
-
Johnson, A.1
O'Donnell, M.2
-
40
-
-
0027220197
-
Conformational coupling in DNA polymerase fidelity
-
doi: 10.1146/annurev.bi.62.070193.003345
-
Johnson, K. A. (1993). Conformational coupling in DNA polymerase fidelity. Annu. Rev. Biochem. 62, 685-713. doi: 10.1146/annurev.bi.62.070193.003345
-
(1993)
Annu. Rev. Biochem.
, vol.62
, pp. 685-713
-
-
Johnson, K.A.1
-
41
-
-
0028206048
-
Function and structure relationships in DNA polymerases
-
doi: 10.1146/annurev.bi.63.070194.004021
-
Joyce, C. M., and Steitz, T. A. (1994). Function and structure relationships in DNA polymerases. Annu. Rev. Biochem. 63, 777-822. doi: 10.1146/annurev.bi.63.070194.004021
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 777-822
-
-
Joyce, C.M.1
Steitz, T.A.2
-
42
-
-
33845940688
-
Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators
-
doi: 10.1073/pnas.0609513103
-
Ju, J., Kim, D. H., Bi, L., Meng, Q., Bai, X., Li, Z., et al. (2006). Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators. Proc. Natl. Acad. Sci. U.S.A. 103, 19635-19640. doi: 10.1073/pnas.0609513103
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 19635-19640
-
-
Ju, J.1
Kim, D.H.2
Bi, L.3
Meng, Q.4
Bai, X.5
Li, Z.6
-
43
-
-
0014198528
-
Deoxynucleotide-polymerizing enzymes of calf thymus gland. II. Properties of the terminal deoxynucleotidyltransferase
-
Kato, K. I., Goncalves, J. M., Houts, G. E., and Bollum, F. J. (1967). Deoxynucleotide-polymerizing enzymes of calf thymus gland. II. Properties of the terminal deoxynucleotidyltransferase. J. Biol. Chem. 242, 2780-2789.
-
(1967)
J. Biol. Chem.
, vol.242
, pp. 2780-2789
-
-
Kato, K.I.1
Goncalves, J.M.2
Houts, G.E.3
Bollum, F.J.4
-
44
-
-
0041058982
-
A conditional lethal mutant of Escherichia coli K12 defective in the 5' leads to 3' exonuclease associated with DNA polymerase I
-
doi: 10.1073/pnas.71.5.2048
-
Konrad, E. B., and Lehman, I. R. (1974). A conditional lethal mutant of Escherichia coli K12 defective in the 5' leads to 3' exonuclease associated with DNA polymerase I. Proc. Natl. Acad. Sci. U.S.A. 71, 2048-2051. doi: 10.1073/pnas.71.5.2048
-
(1974)
Proc. Natl. Acad. Sci. U.S.A.
, vol.71
, pp. 2048-2051
-
-
Konrad, E.B.1
Lehman, I.R.2
-
45
-
-
49749112881
-
Long, processive enzymatic DNA synthesis using 100% dye-labeled terminal phosphate-linked nucleotides
-
doi: 10.1080/15257770802260741
-
Korlach, J., Bibillo, A., Wegener, J., Peluso, P., Pham, T. T., Park, I., et al. (2008). Long, processive enzymatic DNA synthesis using 100% dye-labeled terminal phosphate-linked nucleotides. Nucleosides Nucleotides Nucleic Acids 27, 1072-1083. doi: 10.1080/15257770802260741
-
(2008)
Nucleosides Nucleotides Nucleic Acids
, vol.27
, pp. 1072-1083
-
-
Korlach, J.1
Bibillo, A.2
Wegener, J.3
Peluso, P.4
Pham, T.T.5
Park, I.6
-
46
-
-
77957051540
-
Real-time DNA sequencing from single polymerase molecules
-
doi: 10.1016/S0076-6879(10)72001-2
-
Korlach, J., Bjornson, K. P., Chaudhuri, B. P., Cicero, R. L., Flusberg, B. A., Gray, J. J., et al. (2010). Real-time DNA sequencing from single polymerase molecules. Methods Enzymol. 472, 431-455. doi: 10.1016/S0076-6879(10)72001-2
-
(2010)
Methods Enzymol.
, vol.472
, pp. 431-455
-
-
Korlach, J.1
Bjornson, K.P.2
Chaudhuri, B.P.3
Cicero, R.L.4
Flusberg, B.A.5
Gray, J.J.6
-
47
-
-
26644436048
-
Terminal phosphate labeled nucleotides: synthesis, applications, and linker effect on incorporation by DNA polymerases
-
doi: 10.1081/NCN-200059823
-
Kumar, S., Sood, A., Wegener, J., Finn, P. J., Nampalli, S., Nelson, J. R., et al. (2005). Terminal phosphate labeled nucleotides: synthesis, applications, and linker effect on incorporation by DNA polymerases. Nucleosides Nucleotides Nucleic Acids 24, 401-408. doi: 10.1081/NCN-200059823
-
(2005)
Nucleosides Nucleotides Nucleic Acids
, vol.24
, pp. 401-408
-
-
Kumar, S.1
Sood, A.2
Wegener, J.3
Finn, P.J.4
Nampalli, S.5
Nelson, J.R.6
-
48
-
-
84866994976
-
PEG-labeled nucleotides and nanopore detection for single molecule DNA sequencing by synthesis
-
doi: 10.1038/srep00684
-
Kumar, S., Tao, C., Chien, M., Hellner, B., Balijepalli, A., Robertson, J. W., et al. (2012). PEG-labeled nucleotides and nanopore detection for single molecule DNA sequencing by synthesis. Sci. Rep. 2:684. doi: 10.1038/srep00684
-
(2012)
Sci. Rep.
, vol.2
, pp. 684
-
-
Kumar, S.1
Tao, C.2
Chien, M.3
Hellner, B.4
Balijepalli, A.5
Robertson, J.W.6
-
49
-
-
2342419732
-
DNA replication fidelity
-
doi: 10.1074/jbc.R400006200
-
Kunkel, T. A. (2004). DNA replication fidelity. J. Biol. Chem. 279, 16895-16898. doi: 10.1074/jbc.R400006200
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16895-16898
-
-
Kunkel, T.A.1
-
50
-
-
77957740230
-
Evolving views of DNA replication (in)fidelity
-
doi: 10.1101/sqb.2009.74.027
-
Kunkel, T. A. (2009). Evolving views of DNA replication (in)fidelity. Cold Spring Harb. Symp. Quant. Biol. 74, 91-101. doi: 10.1101/sqb.2009.74.027
-
(2009)
Cold Spring Harb. Symp. Quant. Biol.
, vol.74
, pp. 91-101
-
-
Kunkel, T.A.1
-
51
-
-
0033782798
-
DNA replication fidelity
-
doi: 10.1146/annurev.biochem.69.1.497
-
Kunkel, T. A., and Bebenek, K. (2000). DNA replication fidelity. Annu. Rev. Biochem. 69, 497-529. doi: 10.1146/annurev.biochem.69.1.497
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 497-529
-
-
Kunkel, T.A.1
Bebenek, K.2
-
52
-
-
54249092768
-
Dividing the workload at a eukaryotic replication fork
-
doi: 10.1016/j.tcb.2008.08.005
-
Kunkel, T. A., and Burgers, P. M. (2008). Dividing the workload at a eukaryotic replication fork. Trends Cell Biol. 18, 521-527. doi: 10.1016/j.tcb.2008.08.005
-
(2008)
Trends Cell Biol.
, vol.18
, pp. 521-527
-
-
Kunkel, T.A.1
Burgers, P.M.2
-
53
-
-
0024297824
-
A ligase-mediated gene detection technique
-
doi: 10.1126/science.3413476
-
Landegren, U., Kaiser, R., Sanders, J., and Hood, L. (1988). A ligase-mediated gene detection technique. Science 241, 1077-1080. doi: 10.1126/science.3413476
-
(1988)
Science
, vol.241
, pp. 1077-1080
-
-
Landegren, U.1
Kaiser, R.2
Sanders, J.3
Hood, L.4
-
54
-
-
84862223946
-
Polbase: a repository of biochemical, genetic and structural information about DNA polymerases
-
doi: 10.1093/nar/gkr847
-
Langhorst, B. W., Jack, W. E., Reha-Krantz, L., and Nichols, N. M. (2012). Polbase: a repository of biochemical, genetic and structural information about DNA polymerases. Nucleic Acids Res. 40, D381-D387. doi: 10.1093/nar/gkr847
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Langhorst, B.W.1
Jack, W.E.2
Reha-Krantz, L.3
Nichols, N.M.4
-
55
-
-
18244425276
-
New energy transfer dyes for DNA sequencing
-
doi: 10.1093/nar/25.14.2816
-
Lee, L. G., Spurgeon, S. L., Heiner, C. R., Benson, S. C., Rosenblum, B. B., Menchen, S. M., et al. (1997). New energy transfer dyes for DNA sequencing. Nucleic Acids Res. 25, 2816-2822. doi: 10.1093/nar/25.14.2816
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 2816-2822
-
-
Lee, L.G.1
Spurgeon, S.L.2
Heiner, C.R.3
Benson, S.C.4
Rosenblum, B.B.5
Menchen, S.M.6
-
56
-
-
0001187127
-
Enzymatic synthesis of deoxyribonucleic acid. I. Preparation of substrates and partial purification of an enzyme from Escherichia coli
-
Lehman, I. R., Bessman, M. J., Simms, E. S., and Kornberg, A. (1958a). Enzymatic synthesis of deoxyribonucleic acid. I. Preparation of substrates and partial purification of an enzyme from Escherichia coli. J. Biol. Chem. 233, 163-170.
-
(1958)
J. Biol. Chem.
, vol.233
, pp. 163-170
-
-
Lehman, I.R.1
Bessman, M.J.2
Simms, E.S.3
Kornberg, A.4
-
57
-
-
0042894603
-
Enzymatic Synthesis of deoxyribonucleic acid. V. Chemical composition of enzymatically synthesized deoxyribonucleic acid
-
doi: 10.1073/pnas.44.12.1191
-
Lehman, I. R., Zimmerman, S. B., Adler, J., Bessman, M. J., Simms, E. S., and Kornberg, A. (1958b). Enzymatic Synthesis of deoxyribonucleic acid. V. Chemical composition of enzymatically synthesized deoxyribonucleic acid. Proc. Natl. Acad. Sci. U.S.A. 44, 1191-1196. doi: 10.1073/pnas.44.12.1191
-
(1958)
Proc. Natl. Acad. Sci. U.S.A.
, vol.44
, pp. 1191-1196
-
-
Lehman, I.R.1
Zimmerman, S.B.2
Adler, J.3
Bessman, M.J.4
Simms, E.S.5
Kornberg, A.6
-
58
-
-
0033578332
-
Structure-based design of Taq DNA polymerases with improved properties of dideoxynucleotide incorporation
-
doi: 10.1073/pnas.96.17.9491
-
Li, Y., Mitaxov, V., and Waksman, G. (1999). Structure-based design of Taq DNA polymerases with improved properties of dideoxynucleotide incorporation. Proc. Natl. Acad. Sci. U.S.A. 96, 9491-9496. doi: 10.1073/pnas.96.17.9491
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 9491-9496
-
-
Li, Y.1
Mitaxov, V.2
Waksman, G.3
-
59
-
-
79953707354
-
Improved nucleotide selectivity and termination of 3'-OH unblocked reversible terminators by molecular tuning of 2-nitrobenzyl alkylated HOMedU triphosphates
-
doi: 10.1093/nar/gkq1293
-
Litosh, V. A., Wu, W., Stupi, B. P., Wang, J., Morris, S. E., Hersh, M. N., et al. (2011). Improved nucleotide selectivity and termination of 3'-OH unblocked reversible terminators by molecular tuning of 2-nitrobenzyl alkylated HOMedU triphosphates. Nucleic Acids Res. 39:e39. doi: 10.1093/nar/gkq1293
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Litosh, V.A.1
Wu, W.2
Stupi, B.P.3
Wang, J.4
Morris, S.E.5
Hersh, M.N.6
-
60
-
-
0025046231
-
High speed DNA sequencing by capillary electrophoresis
-
doi: 10.1093/nar/18.15.4417
-
Luckey, J. A., Drossman, H., Kostichka, A. J., Mead, D. A., D'Cunha, J., Norris, T. B., et al. (1990). High speed DNA sequencing by capillary electrophoresis. Nucleic Acids Res. 18, 4417-4421. doi: 10.1093/nar/18.15.4417
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 4417-4421
-
-
Luckey, J.A.1
Drossman, H.2
Kostichka, A.J.3
Mead, D.A.4
D'Cunha, J.5
Norris, T.B.6
-
61
-
-
84859629295
-
Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase
-
doi: 10.1038/nbt.2171
-
Manrao, E. A., Derrington, I. M., Laszlo, A. H., Langford, K. W., Hopper, M. K., Gillgren, N., et al. (2012). Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase. Nat. Biotechnol. 30, 349-353. doi: 10.1038/nbt.2171
-
(2012)
Nat. Biotechnol.
, vol.30
, pp. 349-353
-
-
Manrao, E.A.1
Derrington, I.M.2
Laszlo, A.H.3
Langford, K.W.4
Hopper, M.K.5
Gillgren, N.6
-
62
-
-
0030806306
-
Effect of triphosphate modifications in 2'-deoxynucleoside 5'-triphosphates on their specificity towards various DNA polymerases
-
doi: 10.1016/S0014-5793(97)00577-2
-
Martynov, B. I., Shirokova, E. A., Jasko, M. V., Victorova, L. S., and Krayevsky, A. A. (1997). Effect of triphosphate modifications in 2'-deoxynucleoside 5'-triphosphates on their specificity towards various DNA polymerases. FEBS Lett. 410, 423-427. doi: 10.1016/S0014-5793(97)00577-2
-
(1997)
FEBS Lett.
, vol.410
, pp. 423-427
-
-
Martynov, B.I.1
Shirokova, E.A.2
Jasko, M.V.3
Victorova, L.S.4
Krayevsky, A.A.5
-
63
-
-
72849144434
-
Sequencing technologies - the next generation
-
doi: 10.1038/nrg2626
-
Metzker, M. L. (2010). Sequencing technologies - the next generation. Nat. Rev. Genet. 11, 31-46. doi: 10.1038/nrg2626
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 31-46
-
-
Metzker, M.L.1
-
64
-
-
0029969377
-
Electrophoretically uniform fluorescent dyes for automated DNA sequencing
-
doi: 10.1126/science.271.5254.1420
-
Metzker, M. L., Lu, J., and Gibbs, R. A. (1996). Electrophoretically uniform fluorescent dyes for automated DNA sequencing. Science 271, 1420-1422. doi: 10.1126/science.271.5254.1420
-
(1996)
Science
, vol.271
, pp. 1420-1422
-
-
Metzker, M.L.1
Lu, J.2
Gibbs, R.A.3
-
65
-
-
84855267435
-
The major roles of DNA polymerases epsilon and delta at the eukaryotic replication fork are evolutionarily conserved
-
doi: 10.1371/journal.pgen.1002407
-
Miyabe, I., Kunkel, T. A., and Carr, A. M. (2011). The major roles of DNA polymerases epsilon and delta at the eukaryotic replication fork are evolutionarily conserved. PLoS Genet. 7:e1002407. doi: 10.1371/journal.pgen.1002407
-
(2011)
PLoS Genet.
, vol.7
-
-
Miyabe, I.1
Kunkel, T.A.2
Carr, A.M.3
-
66
-
-
0024325562
-
The human telomere terminal transferase enzyme is a ribonucleoprotein that synthesizes TTAGGG repeats
-
doi: 10.1016/0092-8674(89)90035-4
-
Morin, G. B. (1989). The human telomere terminal transferase enzyme is a ribonucleoprotein that synthesizes TTAGGG repeats. Cell 59, 521-529. doi: 10.1016/0092-8674(89)90035-4
-
(1989)
Cell
, vol.59
, pp. 521-529
-
-
Morin, G.B.1
-
67
-
-
42949119884
-
Division of labor at the eukaryotic replication fork
-
doi: 10.1016/j.molcel.2008.02.022
-
Nick McElhinny, S. A., Gordenin, D. A., Stith, C. M., Burgers, P. M., and Kunkel, T. A. (2008). Division of labor at the eukaryotic replication fork. Mol. Cell 30, 137-144. doi: 10.1016/j.molcel.2008.02.022
-
(2008)
Mol. Cell
, vol.30
, pp. 137-144
-
-
Nick McElhinny, S.A.1
Gordenin, D.A.2
Stith, C.M.3
Burgers, P.M.4
Kunkel, T.A.5
-
68
-
-
0015244841
-
Function of DNA polymerase 3 in DNA replication
-
doi: 10.1038/newbio234285a0
-
Nusslein, V., Otto, B., Bonhoeffer, F., and Schaller, H. (1971). Function of DNA polymerase 3 in DNA replication. Nat. New Biol. 234, 285-286. doi: 10.1038/newbio234285a0
-
(1971)
Nat. New Biol.
, vol.234
, pp. 285-286
-
-
Nusslein, V.1
Otto, B.2
Bonhoeffer, F.3
Schaller, H.4
-
69
-
-
0015184718
-
Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants
-
doi: 10.1073/pnas.68.12.2954
-
Okazaki, R., Arisawa, M., and Sugino, A. (1971). Slow joining of newly replicated DNA chains in DNA polymerase I-deficient Escherichia coli mutants. Proc. Natl. Acad. Sci. U.S.A. 68, 2954-2957. doi: 10.1073/pnas.68.12.2954
-
(1971)
Proc. Natl. Acad. Sci. U.S.A.
, vol.68
, pp. 2954-2957
-
-
Okazaki, R.1
Arisawa, M.2
Sugino, A.3
-
70
-
-
0016330778
-
Replication of Escherichia coli requires DNA polymerase I
-
doi: 10.1038/250513a0
-
Olivera, R. M., and Bonhoeffer, E. (1974). Replication of Escherichia coli requires DNA polymerase I. Nature 250, 513-514. doi: 10.1038/250513a0
-
(1974)
Nature
, vol.250
, pp. 513-514
-
-
Olivera, R.M.1
Bonhoeffer, E.2
-
71
-
-
0029003893
-
Peak height variations in automated sequencing of PCR products using Taq dye-terminator chemistry
-
Parker, L. T., Deng, Q., Zakeri, H., Carlson, C., Nickerson, D. A., and Kwok, P. Y. (1995). Peak height variations in automated sequencing of PCR products using Taq dye-terminator chemistry. Biotechniques 19, 116-121.
-
(1995)
Biotechniques
, vol.19
, pp. 116-121
-
-
Parker, L.T.1
Deng, Q.2
Zakeri, H.3
Carlson, C.4
Nickerson, D.A.5
Kwok, P.Y.6
-
72
-
-
0034881129
-
Getting a grip on how DNA polymerases function
-
doi: 10.1038/90344
-
Patel, P. H., and Loeb, L. A. (2001). Getting a grip on how DNA polymerases function. Nat. Struct. Biol. 8, 656-659. doi: 10.1038/90344
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 656-659
-
-
Patel, P.H.1
Loeb, L.A.2
-
73
-
-
0026033193
-
Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant
-
doi: 10.1021/bi00216a029
-
Patel, S. S., Wong, I., and Johnson, K. A. (1991). Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant. Biochemistry 30, 511-525. doi: 10.1021/bi00216a029
-
(1991)
Biochemistry
, vol.30
, pp. 511-525
-
-
Patel, S.S.1
Wong, I.2
Johnson, K.A.3
-
74
-
-
0026718843
-
Intervening sequences in an Archaea DNA polymerase gene
-
doi: 10.1073/pnas.89.12.5577
-
Perler, F. B., Comb, D. G., Jack, W. E., Moran, L. S., Qiang, B., Kucera, R. B., et al. (1992). Intervening sequences in an Archaea DNA polymerase gene. Proc. Natl. Acad. Sci. U.S.A. 89, 5577-5581. doi: 10.1073/pnas.89.12.5577
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 5577-5581
-
-
Perler, F.B.1
Comb, D.G.2
Jack, W.E.3
Moran, L.S.4
Qiang, B.5
Kucera, R.B.6
-
75
-
-
0023440258
-
A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides
-
doi: 10.1126/science.2443975
-
Prober, J. M., Trainor, G. L., Dam, R. J., Hobbs, F. W., Robertson, C. W., Zagursky, R. J., et al. (1987). A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides. Science 238, 336-341. doi: 10.1126/science.2443975
-
(1987)
Science
, vol.238
, pp. 336-341
-
-
Prober, J.M.1
Trainor, G.L.2
Dam, R.J.3
Hobbs, F.W.4
Robertson, C.W.5
Zagursky, R.J.6
-
76
-
-
34447336941
-
Yeast DNA polymerase epsilon participates in leading-strand DNA replication
-
doi: 10.1126/science.1144067
-
Pursell, Z. F., Isoz, I., Lundstrom, E. B., Johansson, E., and Kunkel, T. A. (2007). Yeast DNA polymerase epsilon participates in leading-strand DNA replication. Science 317, 127-130. doi: 10.1126/science.1144067
-
(2007)
Science
, vol.317
, pp. 127-130
-
-
Pursell, Z.F.1
Isoz, I.2
Lundstrom, E.B.3
Johansson, E.4
Kunkel, T.A.5
-
77
-
-
70249089090
-
Single-molecule sequencing of an individual human genome
-
doi: 10.1038/nbt.1561
-
Pushkarev, D., Neff, N. F., and Quake, S. R. (2009). Single-molecule sequencing of an individual human genome. Nat. Biotechnol. 27, 847-850. doi: 10.1038/nbt.1561
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 847-850
-
-
Pushkarev, D.1
Neff, N.F.2
Quake, S.R.3
-
78
-
-
0030298490
-
Real-time DNA sequencing using detection of pyrophosphate release
-
doi: 10.1006/abio.1996.0432
-
Ronaghi, M., Karamohamed, S., Pettersson, B., Uhlen, M., and Nyren, P. (1996). Real-time DNA sequencing using detection of pyrophosphate release. Anal. Biochem. 242, 84-89. doi: 10.1006/abio.1996.0432
-
(1996)
Anal. Biochem.
, vol.242
, pp. 84-89
-
-
Ronaghi, M.1
Karamohamed, S.2
Pettersson, B.3
Uhlen, M.4
Nyren, P.5
-
79
-
-
0032540905
-
A sequencing method based on real-time pyrophosphate
-
doi: 10.1126/science.281.5375.363
-
Ronaghi, M., Uhlen, M., and Nyren, P. (1998). A sequencing method based on real-time pyrophosphate. Science 281, 363, 365. doi: 10.1126/science.281.5375.363
-
(1998)
Science
, vol.281
-
-
Ronaghi, M.1
Uhlen, M.2
Nyren, P.3
-
80
-
-
0027030347
-
New protocols for DNA sequencing with dye terminators
-
Rosenthal, A., and Charnock-Jones, D. S. (1992). New protocols for DNA sequencing with dye terminators. DNA Seq. 3, 61-64.
-
(1992)
DNA Seq.
, vol.3
, pp. 61-64
-
-
Rosenthal, A.1
Charnock-Jones, D.S.2
-
81
-
-
0027346109
-
Linear amplification sequencing with dye terminators
-
doi: 10.1385/0-89603-248-5:281
-
Rosenthal, A., and Charnock-Jones, D. S. (1993). Linear amplification sequencing with dye terminators. Methods Mol. Biol. 23, 281-296. doi: 10.1385/0-89603-248-5:281
-
(1993)
Methods Mol. Biol.
, vol.23
, pp. 281-296
-
-
Rosenthal, A.1
Charnock-Jones, D.S.2
-
82
-
-
79960597679
-
An integrated semiconductor device enabling non-optical genome sequencing
-
doi: 10.1038/nature10242
-
Rothberg, J. M., Hinz, W., Rearick, T. M., Schultz, J., Mileski, W., Davey, M., et al. (2011). An integrated semiconductor device enabling non-optical genome sequencing. Nature 475, 348-352. doi: 10.1038/nature10242
-
(2011)
Nature
, vol.475
, pp. 348-352
-
-
Rothberg, J.M.1
Hinz, W.2
Rearick, T.M.3
Schultz, J.4
Mileski, W.5
Davey, M.6
-
83
-
-
17844371339
-
Design and synthesis of a 3'-O-allyl photocleavable fluorescent nucleotide as a reversible terminator for DNA sequencing by synthesis
-
doi: 10.1073/pnas.0501962102
-
Ruparel, H., Bi, L., Li, Z., Bai, X., Kim, D. H., Turro, N. J., et al. (2005). Design and synthesis of a 3'-O-allyl photocleavable fluorescent nucleotide as a reversible terminator for DNA sequencing by synthesis. Proc. Natl. Acad. Sci. U.S.A. 102, 5932-5937. doi: 10.1073/pnas.0501962102
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 5932-5937
-
-
Ruparel, H.1
Bi, L.2
Li, Z.3
Bai, X.4
Kim, D.H.5
Turro, N.J.6
-
84
-
-
0017681196
-
DNA sequencing with chain-terminating inhibitors
-
doi: 10.1073/pnas.74.12.5463
-
Sanger, F., Nicklen, S., and Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. U.S.A. 74, 5463-5467. doi: 10.1073/pnas.74.12.5463
-
(1977)
Proc. Natl. Acad. Sci. U.S.A.
, vol.74
, pp. 5463-5467
-
-
Sanger, F.1
Nicklen, S.2
Coulson, A.R.3
-
85
-
-
0023047540
-
Fluorescence detection in automated DNA sequence analysis
-
doi: 10.1038/321674a0
-
Smith, L. M., Sanders, J. Z., Kaiser, R. J., Hughes, P., Dodd, C., Connell, C. R., et al. (1986). Fluorescence detection in automated DNA sequence analysis. Nature 321, 674-679. doi: 10.1038/321674a0
-
(1986)
Nature
, vol.321
, pp. 674-679
-
-
Smith, L.M.1
Sanders, J.Z.2
Kaiser, R.J.3
Hughes, P.4
Dodd, C.5
Connell, C.R.6
-
86
-
-
0030014622
-
Cloning of thermostable DNA polymerases from hyperthermophilic marine Archaea with emphasis on Thermococcus sp. 9 degrees N-7 and mutations affecting 3'-5' exonuclease activity
-
doi: 10.1073/pnas.93.11.5281
-
Southworth, M. W., Kong, H., Kucera, R. B., Ware, J., Jannasch, H. W., and Perler, F. B. (1996). Cloning of thermostable DNA polymerases from hyperthermophilic marine Archaea with emphasis on Thermococcus sp. 9 degrees N-7 and mutations affecting 3'-5' exonuclease activity. Proc. Natl. Acad. Sci. U.S.A. 93, 5281-5285. doi: 10.1073/pnas.93.11.5281
-
(1996)
Proc. Natl. Acad. Sci. U.S.A.
, vol.93
, pp. 5281-5285
-
-
Southworth, M.W.1
Kong, H.2
Kucera, R.B.3
Ware, J.4
Jannasch, H.W.5
Perler, F.B.6
-
87
-
-
0031290492
-
DNA and RNA polymerases: structural diversity and common mechanisms
-
Steitz, T. A. (1997). DNA and RNA polymerases: structural diversity and common mechanisms. Harvey Lect. 93, 75-93.
-
(1997)
Harvey Lect.
, vol.93
, pp. 75-93
-
-
Steitz, T.A.1
-
88
-
-
0033581011
-
DNA polymerases: structural diversity and common mechanisms
-
doi: 10.1074/jbc.274.25.17395
-
Steitz, T. A. (1999). DNA polymerases: structural diversity and common mechanisms. J. Biol. Chem. 274, 17395-17398. doi: 10.1074/jbc.274.25.17395
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 17395-17398
-
-
Steitz, T.A.1
-
89
-
-
0023371227
-
DNA sequence analysis with a modified bacteriophage T7 DNA polymerase
-
doi: 10.1073/pnas.84.14.4767
-
Tabor, S., and Richardson, C. C. (1987). DNA sequence analysis with a modified bacteriophage T7 DNA polymerase. Proc. Natl. Acad. Sci. U.S.A. 84, 4767-4771. doi: 10.1073/pnas.84.14.4767
-
(1987)
Proc. Natl. Acad. Sci. U.S.A.
, vol.84
, pp. 4767-4771
-
-
Tabor, S.1
Richardson, C.C.2
-
90
-
-
0006962619
-
Effect of manganese ions on the incorporation of dideoxynucleotides by bacteriophage T7 DNA polymerase and Escherichia coli DNA polymerase I
-
doi: 10.1073/pnas.86.11.4076
-
Tabor, S., and Richardson, C. C. (1989). Effect of manganese ions on the incorporation of dideoxynucleotides by bacteriophage T7 DNA polymerase and Escherichia coli DNA polymerase I. Proc. Natl. Acad. Sci. U.S.A. 86, 4076-4080. doi: 10.1073/pnas.86.11.4076
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 4076-4080
-
-
Tabor, S.1
Richardson, C.C.2
-
91
-
-
0029023051
-
A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy- and dideoxyribonucleotides
-
doi: 10.1073/pnas.92.14.6339
-
Tabor, S., and Richardson, C. C. (1995). A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy- and dideoxyribonucleotides. Proc. Natl. Acad. Sci. U.S.A. 92, 6339-6343. doi: 10.1073/pnas.92.14.6339
-
(1995)
Proc. Natl. Acad. Sci. U.S.A.
, vol.92
, pp. 6339-6343
-
-
Tabor, S.1
Richardson, C.C.2
-
92
-
-
0032768754
-
New substrates of DNA polymerases
-
doi: 10.1016/S0014-5793(99)00615-8
-
Victorova, L., Sosunov, V., Skoblov, A., Shipytsin, A., and Krayevsky, A. (1999). New substrates of DNA polymerases. FEBS Lett. 453, 6-10. doi: 10.1016/S0014-5793(99)00615-8
-
(1999)
FEBS Lett.
, vol.453
, pp. 6-10
-
-
Victorova, L.1
Sosunov, V.2
Skoblov, A.3
Shipytsin, A.4
Krayevsky, A.5
-
93
-
-
0026026192
-
An induced-fit kinetic mechanism for DNA replication fidelity: direct measurement by single-turnover kinetics
-
doi: 10.1021/bi00216a030
-
Wong, I., Patel, S. S., and Johnson, K. A. (1991). An induced-fit kinetic mechanism for DNA replication fidelity: direct measurement by single-turnover kinetics. Biochemistry 30, 526-537. doi: 10.1021/bi00216a030
-
(1991)
Biochemistry
, vol.30
, pp. 526-537
-
-
Wong, I.1
Patel, S.S.2
Johnson, K.A.3
-
94
-
-
36749056827
-
3'-O-modified nucleotides as reversible terminators for pyrosequencing
-
doi: 10.1073/pnas.0707495104
-
Wu, J., Zhang, S., Meng, Q., Cao, H., Li, Z., Li, X., et al. (2007). 3'-O-modified nucleotides as reversible terminators for pyrosequencing. Proc. Natl. Acad. Sci. U.S.A. 104, 16462-16467. doi: 10.1073/pnas.0707495104
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 16462-16467
-
-
Wu, J.1
Zhang, S.2
Meng, Q.3
Cao, H.4
Li, Z.5
Li, X.6
-
95
-
-
0031547960
-
Biochemical and mutational studies of the 5'-3' exonuclease of DNA polymerase I of Escherichia coli
-
doi: 10.1006/jmbi.1997.0967
-
Xu, Y., Derbyshire, V., Ng, K., Sun, X. C., Grindley, N. D., and Joyce, C. M. (1997). Biochemical and mutational studies of the 5'-3' exonuclease of DNA polymerase I of Escherichia coli. J. Mol. Biol. 268, 284-302. doi: 10.1006/jmbi.1997.0967
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 284-302
-
-
Xu, Y.1
Derbyshire, V.2
Ng, K.3
Sun, X.C.4
Grindley, N.D.5
Joyce, C.M.6
-
96
-
-
0025352139
-
DNA sequencing separations in capillary gels on a modified commercial DNA sequencing instrument
-
Zagursky, R. J., and McCormick, R. M. (1990). DNA sequencing separations in capillary gels on a modified commercial DNA sequencing instrument. Biotechniques 9, 74-79.
-
(1990)
Biotechniques
, vol.9
, pp. 74-79
-
-
Zagursky, R.J.1
McCormick, R.M.2
-
97
-
-
68249097023
-
Polymerization fidelity of a replicative DNA polymerase from the hyperthermophilic archaeon Sulfolobus solfataricus P2
-
doi: 10.1021/bi900532w
-
Zhang, L., Brown, J. A., Newmister, S. A., and Suo, Z. (2009). Polymerization fidelity of a replicative DNA polymerase from the hyperthermophilic archaeon Sulfolobus solfataricus P2. Biochemistry 48, 7492-7501. doi: 10.1021/bi900532w
-
(2009)
Biochemistry
, vol.48
, pp. 7492-7501
-
-
Zhang, L.1
Brown, J.A.2
Newmister, S.A.3
Suo, Z.4
|