Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators

Proceedings of the National Academy of Sciences of the United States of America

Volumn 103, Issue 52, 2006, Pages 19635-19640

  Ju, Jingyue ^a,b   Kim, Dae Hyun ^a,b   Bi, Lanrong ^a,b   Meng, Qinglin ^a,b,c   Bai, Xiaopeng ^a,b,c   Li, Zengmin ^a,b   Li, Xiaoxu ^a,b   Marma, Mong Sano ^a,b   Shi, Shundi ^a   Wu, Jian ^a,b,c   Edwards, John R ^a,b   Romu, Aireen ^a   Turro, Nicholas J ^a,c  

^a Columbia University College of Physicians and Surgeons ^*  (United States)

^b Columbia University ^*  (United States)

^c Och Spine at New York Presbyterian Hospitals   (United States)

Author keywords

DNA chip

Indexed keywords

3' O ALLYL DEOXYADENOSINE TRIPHOSPHATE; 3' O ALLYL DEOXYCYTIDINE TRIPHOSPHATE; 3' O ALLYL DEOXYGUANOSINE TRIPHOSPHATE; 3' O ALLYL THYMIDINE TRIPHOSPHATE; ADENOSINE; ALLYL COMPOUND; CYTOSINE; DEOXYADENOSINE TRIPHOSPHATE; DEOXYCYTIDINE TRIPHOSPHATE; DEOXYGUANOSINE TRIPHOSPHATE; DNA; DNA POLYMERASE; GUANINE; HYDROXYL GROUP; NUCLEOTIDE; PALLADIUM; THYMIDINE; THYMIDINE TRIPHOSPHATE; UNCLASSIFIED DRUG;

AQUEOUS SOLUTION; ARTICLE; BIOENGINEERING; CATALYSIS; CHEMICAL MODIFICATION; DNA MICROARRAY; DNA SEQUENCE; DNA SYNTHESIS; DNA TEMPLATE; FLUORESCENCE; MOLECULAR RECOGNITION; PRIORITY JOURNAL; SOLID;

BASE SEQUENCE; COLOR; DNA; FLUORESCENT DYES; MOLECULAR STRUCTURE; NUCLEOTIDES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 33845940688     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0609513103     Document Type: Article

References (30)

1. Collins FS, Green ED, Guttmacher AE, Guyer MS (2003) Nature 422:835-847.
2. Smith LM, Sanders JZ, Kaiser RJ, Hughes P, Dodd C, Connell CR, Heiner C, Kent SB, Hood LE (1986) Nature 321:674-679.
3. Prober JM, Trainor GL, Dam RJ, Hobbs FW, Robertson CW, Zagursky RJ, Cocuzza AJ, Jensen MA, Baumeister K (1987) Science 238:336-341.
4. Ju J, Ruan C, Fuller CW, Glazer AN, Mathies RA (1995) Proc Natl Acad Sci USA 92:4347-4351.
5. Kan CW, Doherty EA, Barron AE (2003) Electrophoresis 24:4161-4169.
6. Drmanac S, Kita D, Labat I, Hauser B, Schmidt C, Burczak JD, Drmanac R (1998) Nat Biotechnol 16:54-58.
7. Fu DJ, Tang K, Braun A, Reuter D, Darnhofer-Demar B, Little DP, O'Donnell MJ, Cantor CR, Koster H (1998) Nat Biotechnol 16:381-384.
8. Roskey MT, Juhasz P, Smirnov IP, Takach EJ, Martin SA, Haff LA (1996) Proc Natl Acad Sci USA 93:4724-4729.
9. Edwards JR, Itagaki Y, Ju J (2001) Nucleic Acids Res 29:E104-E104.
10. Kasianowicz JJ, Brandin E, Branton D, Deamer DW (1996) Proc Natl Acad Sci USA 93:13770-13773.
11. Shendure J, Porreca GJ, Reppas NB, Lin X, McCutcheon JP, Rosenbaum AM, Wang MD, Zhang K, Mitra RD, Church GM (2005) Science 309:1728-1732.
12. Ronaghi M, Uhlen M, Nyren P (1998) Science 281:363-365.
13. Braslavsky I, Hebert B, Kartalov E, Quake SR (2003) Proc Natl Acad Sci USA 100:3960-3964.
14. Mitra RD, Shendure J, Olejnik J, Edyta Krzymanska O, Church GM (2003) Anal Biochem 320:55-65.
15. Hyman ED (1988) Anal Biochem 174:423-436.
16. Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen Y-J, Chen Z, et al. (2005) Nature 437:376-380.
17. Cheeseman PC (1994) US Patent 5,302,509.
18. Metzker ML, Raghavachari R, Richards S, Jacutin SE, Civitello A, Burgess K, Gibbs RA (1994) Nucleic Acids Res 22:4259-4267.
19. Welch MB, Burgess K (1999) Nucleosides Nucleotides 18:197-201.
20. Lu G, Burgess K (2006) Bioorg Med Chem Lett 16:3902-3905.
21. Metzker ML (2005) Genome Res 15:1767-1776.
22. Pelletier H, Sawaya MR, Kumar A, Wilson SH, Kraut J (1994) Science 264:1891-1903.
23. Rosenblum BB, Lee LG, Spurgeon SL, Khan SH, Menchen SM, Heiner CR, Chen SM (1997) Nucleic Acids Res 25:4500-4504.
24. Zhu Z, Chao J, Yu H, Waggoner AS (1994) Nucleic Acids Res 22:3418-3422.
25. Ju J, Li Z, Edwards J, Itagaki Y (2003) US Patent 6,664,079.
26. Seo TS, Bai X, Kim DH, Meng O, Shi S, Ruparel H, Li Z, Turro NJ, Ju J (2005) Proc Natl Acad Sci USA 102:5926-5931.
27. Bi L, Kim DH, Ju J (2006) J Am Chem Soc 128:2542-2543.
28. Ruparel H, Bi L, Li Z, Bai X, Kim DH, Turro NJ, Ju J (2005) Proc Natl Acad Sci USA 102:5932-5937.
29. Meng O, Kim DH, Bai X, Bi L, Turro NJ, Ju J (2006) J Org Chem 71:3248-3252.
30. Barnes C, Balasubramanian S, Liu X, Swerdlow H, Milton J (2006) US Patent 7,057,026.