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Volumn 10, Issue 6, 2014, Pages

Pervasive Divergence of Transcriptional Gene Regulation in Caenorhabditis Nematodes

Author keywords

[No Author keywords available]

Indexed keywords

ACR 14 GENE; ADULT; ANIMAL EXPERIMENT; ARTICLE; CAENORHABDITIS; CAENORHABDITIS BRENNERI; CAENORHABDITIS BRIGGSAE; CAENORHABDITIS ELEGANS; CAENORHABDITIS JAPONICA; CAENORHABDITIS REMANEI; CIS ISOMER; CONTROLLED STUDY; ENHANCER REGION; GENE; GENE EXPRESSION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC CONSERVATION; GENETIC VARIABILITY; GPA 5 GENE; KAT 1 GENE; MOD 5 GENE; NONHUMAN; OIG 1 GENE; ORTHOLOGY; PROMOTER REGION; REGULATORY MECHANISM; TRANS ISOMER; TRANSCRIPTION REGULATION; UNC 25 GENE; UNC 46 GENE; UNC 47 GENE; YOUNG ADULT; ANIMAL; BINDING SITE; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; METABOLISM; MOLECULAR EVOLUTION; NUCLEOTIDE SEQUENCE; REGULATORY SEQUENCE; SPECIES DIFFERENCE;

EID: 84903459207     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1004435     Document Type: Article
Times cited : (18)

References (100)
  • 1
    • 0042697343 scopus 로고    scopus 로고
    • The evolution of transcriptional regulation in eukaryotes
    • doi: 10.1093/molbev/msg140
    • Wray GA, Hahn MW, Abouheif E, Balhoff JP, Pizer M, et al. (2003) The evolution of transcriptional regulation in eukaryotes. Mol Biol Evol 20: 1377-1419 doi:10.1093/molbev/msg140.
    • (2003) Mol Biol Evol , vol.20 , pp. 1377-1419
    • Wray, G.A.1    Hahn, M.W.2    Abouheif, E.3    Balhoff, J.P.4    Pizer, M.5
  • 2
    • 51549097146 scopus 로고    scopus 로고
    • Resurrecting the role of transcription factor change in developmental evolution
    • doi: 10.1111/j.1558-5646.2008.00440.x
    • Lynch VJ, Wagner GP, (2008) Resurrecting the role of transcription factor change in developmental evolution. Evolution 62: 2131-2154 doi:10.1111/j.1558-5646.2008.00440.x.
    • (2008) Evolution , vol.62 , pp. 2131-2154
    • Lynch, V.J.1    Wagner, G.P.2
  • 3
    • 0037382642 scopus 로고    scopus 로고
    • Evolution of transcription factor function
    • doi: 10.1016/S0959-437X(03)00017-0
    • Hsia CC, McGinnis W, (2003) Evolution of transcription factor function. Curr Opin Genet Dev 13: 199-206 doi:10.1016/S0959-437X(03)00017-0.
    • (2003) Curr Opin Genet Dev , vol.13 , pp. 199-206
    • Hsia, C.C.1    McGinnis, W.2
  • 4
    • 40149098862 scopus 로고    scopus 로고
    • The evolution of combinatorial gene regulation in fungi
    • doi: 10.1371/journal.pbio.0060038
    • Tuch BB, Galgoczy DJ, Hernday AD, Li H, Johnson AD, (2008) The evolution of combinatorial gene regulation in fungi. PLoS Biol 6: e38 doi:10.1371/journal.pbio.0060038.
    • (2008) PLoS Biol , vol.6
    • Tuch, B.B.1    Galgoczy, D.J.2    Hernday, A.D.3    Li, H.4    Johnson, A.D.5
  • 5
    • 33847057226 scopus 로고    scopus 로고
    • The evolutionary significance of cis-regulatory mutations
    • doi: 10.1038/nrg2063
    • Wray GA, (2007) The evolutionary significance of cis-regulatory mutations. Nat Rev Genet 8: 206-216 doi:10.1038/nrg2063.
    • (2007) Nat Rev Genet , vol.8 , pp. 206-216
    • Wray, G.A.1
  • 6
    • 0034625265 scopus 로고    scopus 로고
    • Endless forms: The evolution of gene regulation and morphological diversity
    • Carroll SB, (2000) Endless forms: The evolution of gene regulation and morphological diversity. Cell 101: 577-580.
    • (2000) Cell , vol.101 , pp. 577-580
    • Carroll, S.B.1
  • 7
    • 0037177625 scopus 로고    scopus 로고
    • Genetic dissection of transcriptional regulation in budding yeast
    • doi: 10.1126/science.1069516
    • Brem RB, Yvert G, Clinton R, Kruglyak L, (2002) Genetic dissection of transcriptional regulation in budding yeast. Science 296: 752-755 doi:10.1126/science.1069516.
    • (2002) Science , vol.296 , pp. 752-755
    • Brem, R.B.1    Yvert, G.2    Clinton, R.3    Kruglyak, L.4
  • 9
    • 23944501269 scopus 로고    scopus 로고
    • Genomic sources of regulatory variation in cis and in trans
    • doi: 10.1007/s00018-005-5064-9
    • Wittkopp PJ, (2005) Genomic sources of regulatory variation in cis and in trans. Cell Mol Life Sci 62: 1779-1783 doi:10.1007/s00018-005-5064-9.
    • (2005) Cell Mol Life Sci , vol.62 , pp. 1779-1783
    • Wittkopp, P.J.1
  • 10
    • 84859208133 scopus 로고    scopus 로고
    • Contrasting properties of gene-specific regulatory, coding, and copy number mutations in Saccharomyces cerevisiae: frequency, effects, and dominance
    • doi: 10.1371/journal.pgen.1002497
    • Gruber JD, Vogel K, Kalay G, Wittkopp PJ, (2012) Contrasting properties of gene-specific regulatory, coding, and copy number mutations in Saccharomyces cerevisiae: frequency, effects, and dominance. PLoS Genet 8: e1002497 doi:10.1371/journal.pgen.1002497.
    • (2012) PLoS Genet , vol.8
    • Gruber, J.D.1    Vogel, K.2    Kalay, G.3    Wittkopp, P.J.4
  • 11
    • 34250785284 scopus 로고    scopus 로고
    • Genetic properties influencing the evolvability of gene expression
    • doi: 10.1126/science.1140247
    • Landry CR, Lemos B, Rifkin SA, Dickinson WJ, Hartl DL, (2007) Genetic properties influencing the evolvability of gene expression. Science 317: 118-121 doi:10.1126/science.1140247.
    • (2007) Science , vol.317 , pp. 118-121
    • Landry, C.R.1    Lemos, B.2    Rifkin, S.A.3    Dickinson, W.J.4    Hartl, D.L.5
  • 13
    • 33750204634 scopus 로고    scopus 로고
    • Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments
    • doi: 10.1186/1471-2105-7-376
    • Pollard DA, Moses AM, Iyer VN, Eisen MB, (2006) Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments. BMC Bioinformatics 7: 376 doi:10.1186/1471-2105-7-376.
    • (2006) BMC Bioinformatics , vol.7 , pp. 376
    • Pollard, D.A.1    Moses, A.M.2    Iyer, V.N.3    Eisen, M.B.4
  • 14
    • 73649107243 scopus 로고    scopus 로고
    • Functional evolution of cis-regulatory modules at a homeotic gene in Drosophila
    • doi: 10.1371/journal.pgen.1000709
    • Ho MCW, Johnsen H, Goetz SE, Schiller BJ, Bae E, et al. (2009) Functional evolution of cis-regulatory modules at a homeotic gene in Drosophila. PLoS Genet 5: e1000709 doi:10.1371/journal.pgen.1000709.
    • (2009) PLoS Genet , vol.5
    • Ho, M.C.W.1    Johnsen, H.2    Goetz, S.E.3    Schiller, B.J.4    Bae, E.5
  • 15
    • 34548690542 scopus 로고    scopus 로고
    • Functional Architecture and Evolution of Transcriptional Elements That Drive Gene Coexpression
    • doi: 10.1126/science.1145893
    • Brown CD, Johnson DS, Sidow A, (2007) Functional Architecture and Evolution of Transcriptional Elements That Drive Gene Coexpression. Science 317: 1557-1560 doi:10.1126/science.1145893.
    • (2007) Science , vol.317 , pp. 1557-1560
    • Brown, C.D.1    Johnson, D.S.2    Sidow, A.3
  • 16
    • 70350622577 scopus 로고    scopus 로고
    • Flexibility of transcription factor target site position in conserved cis-regulatory modules
    • doi: 10.1016/j.ydbio.2009.09.018
    • Cameron RA, Davidson EH, (2009) Flexibility of transcription factor target site position in conserved cis-regulatory modules. Dev Biol 336: 122-135 doi:10.1016/j.ydbio.2009.09.018.
    • (2009) Dev Biol , vol.336 , pp. 122-135
    • Cameron, R.A.1    Davidson, E.H.2
  • 17
    • 84857473514 scopus 로고    scopus 로고
    • Tempo and mode in evolution of transcriptional regulation
    • doi: 10.1371/journal.pgen.1002432
    • Gordon KL, Ruvinsky I, (2012) Tempo and mode in evolution of transcriptional regulation. PLoS Genet 8: e1002432 doi:10.1371/journal.pgen.1002432.
    • (2012) PLoS Genet , vol.8
    • Gordon, K.L.1    Ruvinsky, I.2
  • 18
    • 0037106119 scopus 로고    scopus 로고
    • Multiple regulatory changes contribute to the evolution of the Caenorhabditis lin-48 ovo gene
    • doi: 10.1101/gad.996302
    • Wang X, Chamberlin HM, (2002) Multiple regulatory changes contribute to the evolution of the Caenorhabditis lin-48 ovo gene. Genes Dev 16: 2345-2349 doi:10.1101/gad.996302.
    • (2002) Genes Dev , vol.16 , pp. 2345-2349
    • Wang, X.1    Chamberlin, H.M.2
  • 19
    • 3242681708 scopus 로고    scopus 로고
    • Evolution of regulatory elements producing a conserved gene expression pattern in Caenorhabditis
    • doi: 10.1111/j.1525-142X.2004.04029.x
    • Wang X, Greenberg JF, Chamberlin HM, (2004) Evolution of regulatory elements producing a conserved gene expression pattern in Caenorhabditis. Evol Dev 6: 237-245 doi:10.1111/j.1525-142X.2004.04029.x.
    • (2004) Evol Dev , vol.6 , pp. 237-245
    • Wang, X.1    Greenberg, J.F.2    Chamberlin, H.M.3
  • 20
    • 33845489511 scopus 로고    scopus 로고
    • Two or four bristles: functional evolution of an enhancer of scute in Drosophilidae
    • doi: 10.1371/journal.pbio.0040386
    • Marcellini S, Simpson P, (2006) Two or four bristles: functional evolution of an enhancer of scute in Drosophilidae. PLoS Biol 4: e386 doi:10.1371/journal.pbio.0040386.
    • (2006) PLoS Biol , vol.4
    • Marcellini, S.1    Simpson, P.2
  • 21
    • 73349095713 scopus 로고    scopus 로고
    • Roles of trans and cis variation in yeast intraspecies evolution of gene expression
    • doi: 10.1093/molbev/msp171
    • Sung H-M, Wang T-Y, Wang D, Huang Y-S, Wu J-P, et al. (2009) Roles of trans and cis variation in yeast intraspecies evolution of gene expression. Mol Biol Evol 26: 2533-2538 doi:10.1093/molbev/msp171.
    • (2009) Mol Biol Evol , vol.26 , pp. 2533-2538
    • Sung, H.-M.1    Wang, T.-Y.2    Wang, D.3    Huang, Y.-S.4    Wu, J.-P.5
  • 22
    • 84866943831 scopus 로고    scopus 로고
    • Coevolution within and between Regulatory Loci Can Preserve Promoter Function Despite Evolutionary Rate Acceleration
    • doi: 10.1371/journal.pgen.1002961
    • Barrière A, Gordon KL, Ruvinsky I, (2012) Coevolution within and between Regulatory Loci Can Preserve Promoter Function Despite Evolutionary Rate Acceleration. PLoS Genet 8: e1002961 doi:10.1371/journal.pgen.1002961.
    • (2012) PLoS Genet , vol.8
    • Barrière, A.1    Gordon, K.L.2    Ruvinsky, I.3
  • 23
    • 0037811432 scopus 로고    scopus 로고
    • Phylogenetically and spatially conserved word pairs associated with gene-expression changes in yeasts
    • doi: 10.1186/gb-2003-4-7-r43
    • Chiang DY, Moses AM, Kellis M, Lander ES, Eisen MB, (2003) Phylogenetically and spatially conserved word pairs associated with gene-expression changes in yeasts. Genome Biol 4: R43 doi:10.1186/gb-2003-4-7-r43.
    • (2003) Genome Biol , vol.4
    • Chiang, D.Y.1    Moses, A.M.2    Kellis, M.3    Lander, E.S.4    Eisen, M.B.5
  • 24
    • 8844270153 scopus 로고    scopus 로고
    • Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura
    • doi: 10.1093/bioinformatics/bth320
    • Grad YH, Roth FP, Halfon MS, Church GM, (2004) Prediction of similarly acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura. Bioinformatics 20: 2738-2750 doi:10.1093/bioinformatics/bth320.
    • (2004) Bioinformatics , vol.20 , pp. 2738-2750
    • Grad, Y.H.1    Roth, F.P.2    Halfon, M.S.3    Church, G.M.4
  • 25
    • 84856121390 scopus 로고    scopus 로고
    • Ancestral and conserved cis-regulatory architectures in developmental control genes
    • doi: 10.1016/j.ydbio.2011.12.011
    • Rebeiz M, Castro B, Liu F, Yue F, Posakony JW, (2012) Ancestral and conserved cis-regulatory architectures in developmental control genes. Dev Biol 362: 282-294 doi:10.1016/j.ydbio.2011.12.011.
    • (2012) Dev Biol , vol.362 , pp. 282-294
    • Rebeiz, M.1    Castro, B.2    Liu, F.3    Yue, F.4    Posakony, J.W.5
  • 26
    • 46249134068 scopus 로고    scopus 로고
    • Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation
    • doi: 10.1371/journal.pgen.1000106
    • Hare EE, Peterson BK, Iyer VN, Meier R, Eisen MB, (2008) Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation. PLoS Genet 4: e1000106 doi:10.1371/journal.pgen.1000106.
    • (2008) PLoS Genet , vol.4
    • Hare, E.E.1    Peterson, B.K.2    Iyer, V.N.3    Meier, R.4    Eisen, M.B.5
  • 27
    • 70149102036 scopus 로고    scopus 로고
    • Conservation of enhancer location in divergent insects
    • doi: 10.1073/pnas.0905754106
    • Cande J, Goltsev Y, Levine MS, (2009) Conservation of enhancer location in divergent insects. Proc Natl Acad Sci 106: 14414-14419 doi:10.1073/pnas.0905754106.
    • (2009) Proc Natl Acad Sci , vol.106 , pp. 14414-14419
    • Cande, J.1    Goltsev, Y.2    Levine, M.S.3
  • 28
    • 0028268258 scopus 로고
    • The bipartite D. melanogaster twist promoter is reorganized in D. virilis
    • Pan D, Valentine SA, Courey AJ, (1994) The bipartite D. melanogaster twist promoter is reorganized in D. virilis. Mech Dev 46: 41-53.
    • (1994) Mech Dev , vol.46 , pp. 41-53
    • Pan, D.1    Valentine, S.A.2    Courey, A.J.3
  • 29
    • 54949151898 scopus 로고    scopus 로고
    • Evolutionary plasticity of polycomb/trithorax response elements in Drosophila species
    • doi: 10.1371/journal.pbio.0060261
    • Hauenschild A, Ringrose L, Altmutter C, Paro R, Rehmsmeier M, (2008) Evolutionary plasticity of polycomb/trithorax response elements in Drosophila species. PLoS Biol 6: e261 doi:10.1371/journal.pbio.0060261.
    • (2008) PLoS Biol , vol.6
    • Hauenschild, A.1    Ringrose, L.2    Altmutter, C.3    Paro, R.4    Rehmsmeier, M.5
  • 30
    • 78649716038 scopus 로고    scopus 로고
    • Nomadic enhancers: Tissue-specific cis-regulatory elements of yellow have divergent genomic positions among Drosophila species
    • doi: 10.1371/journal.pgen.1001222
    • Kalay G, Wittkopp PJ, (2010) Nomadic enhancers: Tissue-specific cis-regulatory elements of yellow have divergent genomic positions among Drosophila species. PLoS Genet 6: e1001222 doi:10.1371/journal.pgen.1001222.
    • (2010) PLoS Genet , vol.6
    • Kalay, G.1    Wittkopp, P.J.2
  • 31
    • 79959825697 scopus 로고    scopus 로고
    • Morphological evolution caused by many subtle-effect substitutions in regulatory DNA
    • doi: 10.1038/nature10200
    • Frankel N, Erezyilmaz DF, McGregor AP, Wang S, Payre F, et al. (2011) Morphological evolution caused by many subtle-effect substitutions in regulatory DNA. Nature 474: 598-603 doi:10.1038/nature10200.
    • (2011) Nature , vol.474 , pp. 598-603
    • Frankel, N.1    Erezyilmaz, D.F.2    McGregor, A.P.3    Wang, S.4    Payre, F.5
  • 32
    • 0034598832 scopus 로고    scopus 로고
    • Evidence for stabilizing selection in eukaryotic enhancer element
    • Ludwig MZ, Bergman C, Patel NH, Kreitman M, (2000) Evidence for stabilizing selection in eukaryotic enhancer element. Nature 403: 564-567.
    • (2000) Nature , vol.403 , pp. 564-567
    • Ludwig, M.Z.1    Bergman, C.2    Patel, N.H.3    Kreitman, M.4
  • 33
    • 13444304173 scopus 로고    scopus 로고
    • Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila
    • doi: 10.1038/nature03235
    • Gompel N, Prud'homme B, Wittkopp PJ, Kassner VA, Carroll SB, (2005) Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila. Nature 433: 481-487 doi:10.1038/nature03235.
    • (2005) Nature , vol.433 , pp. 481-487
    • Gompel, N.1    Prud'homme, B.2    Wittkopp, P.J.3    Kassner, V.A.4    Carroll, S.B.5
  • 34
    • 33646191543 scopus 로고    scopus 로고
    • Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene
    • doi: 10.1038/nature04597
    • Prud'homme B, Gompel N, Rokas A, Kassner VA, Williams TM, et al. (2006) Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene. Nature 440: 1050-1053 doi:10.1038/nature04597.
    • (2006) Nature , vol.440 , pp. 1050-1053
    • Prud'homme, B.1    Gompel, N.2    Rokas, A.3    Kassner, V.A.4    Williams, T.M.5
  • 35
    • 0035051264 scopus 로고    scopus 로고
    • Developmental system drift and flexibility in evolutionary trajectories
    • True JR, Haag ES, (2001) Developmental system drift and flexibility in evolutionary trajectories. Evol Dev 3: 109-119.
    • (2001) Evol Dev , vol.3 , pp. 109-119
    • True, J.R.1    Haag, E.S.2
  • 36
    • 0017618537 scopus 로고
    • Post-embryonic cell lineages of the nematode, Caenorhabditis elegans
    • Sulston JE, Horvitz HR, (1977) Post-embryonic cell lineages of the nematode, Caenorhabditis elegans. Dev Biol 56: 110-156.
    • (1977) Dev Biol , vol.56 , pp. 110-156
    • Sulston, J.E.1    Horvitz, H.R.2
  • 37
    • 0020858899 scopus 로고
    • The embryonic cell lineage of the nematode Caenorhabditis elegans
    • Sulston JE, Schierenberg E, White JG, Thomson JN, (1983) The embryonic cell lineage of the nematode Caenorhabditis elegans. Dev Biol 100: 64-119.
    • (1983) Dev Biol , vol.100 , pp. 64-119
    • Sulston, J.E.1    Schierenberg, E.2    White, J.G.3    Thomson, J.N.4
  • 38
    • 38349194085 scopus 로고    scopus 로고
    • Comparative analysis of embryonic cell lineage between Caenorhabditis briggsae and Caenorhabditis elegans
    • doi: 10.1016/j.ydbio.2007.11.015
    • Zhao Z, Boyle TJ, Bao Z, Murray JI, Mericle B, et al. (2008) Comparative analysis of embryonic cell lineage between Caenorhabditis briggsae and Caenorhabditis elegans. Dev Biol 314: 93-99 doi:10.1016/j.ydbio.2007.11.015.
    • (2008) Dev Biol , vol.314 , pp. 93-99
    • Zhao, Z.1    Boyle, T.J.2    Bao, Z.3    Murray, J.I.4    Mericle, B.5
  • 39
    • 22344437987 scopus 로고    scopus 로고
    • Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach
    • doi: 10.1186/gb-2005-6-2-r18
    • Elemento O, Tavazoie S, (2005) Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach. Genome Biol 6: R18 doi:10.1186/gb-2005-6-2-r18.
    • (2005) Genome Biol , vol.6
    • Elemento, O.1    Tavazoie, S.2
  • 40
    • 38549117942 scopus 로고    scopus 로고
    • The phylogenetic relationships of Caenorhabditis and other rhabditids
    • doi:10.1895/wormbook.1.11.1
    • Kiontke K, Fitch DHA (2005) The phylogenetic relationships of Caenorhabditis and other rhabditids. WormBook: The online review of C. elegans biology. pp. 1-11. doi:10.1895/wormbook.1.11.1.
    • (2005) WormBook: The online review of C. elegans biology , pp. 1-11
    • Kiontke, K.1    Fitch, D.H.A.2
  • 41
    • 80052877875 scopus 로고    scopus 로고
    • Inferring regulatory mechanisms from patterns of evolutionary divergence
    • doi: 10.1038/msb.2011.60
    • Tirosh I, Barkai N, (2011) Inferring regulatory mechanisms from patterns of evolutionary divergence. Mol Syst Biol 7: 530 doi:10.1038/msb.2011.60.
    • (2011) Mol Syst Biol , vol.7 , pp. 530
    • Tirosh, I.1    Barkai, N.2
  • 42
    • 33645131133 scopus 로고    scopus 로고
    • Compensatory cis-trans evolution and the dysregulation of gene expression in interspecific hybrids of Drosophila
    • doi: 10.1534/genetics.105.047449
    • Landry CR, Wittkopp PJ, Taubes CH, Ranz JM, Clark AG, et al. (2005) Compensatory cis-trans evolution and the dysregulation of gene expression in interspecific hybrids of Drosophila. Genetics 171: 1813-1822 doi:10.1534/genetics.105.047449.
    • (2005) Genetics , vol.171 , pp. 1813-1822
    • Landry, C.R.1    Wittkopp, P.J.2    Taubes, C.H.3    Ranz, J.M.4    Clark, A.G.5
  • 43
    • 39749116219 scopus 로고    scopus 로고
    • Regulatory changes underlying expression differences within and between Drosophila species
    • doi: 10.1038/ng.77
    • Wittkopp PJ, Haerum BK, Clark AG, (2008) Regulatory changes underlying expression differences within and between Drosophila species. Nat Genet 40: 346-350 doi:10.1038/ng.77.
    • (2008) Nat Genet , vol.40 , pp. 346-350
    • Wittkopp, P.J.1    Haerum, B.K.2    Clark, A.G.3
  • 44
    • 65549086559 scopus 로고    scopus 로고
    • A yeast hybrid provides insight into the evolution of gene expression regulation
    • doi: 10.1126/science.1169766
    • Tirosh I, Reikhav S, Levy AA, Barkai N, (2009) A yeast hybrid provides insight into the evolution of gene expression regulation. Science 324: 659-662 doi:10.1126/science.1169766.
    • (2009) Science , vol.324 , pp. 659-662
    • Tirosh, I.1    Reikhav, S.2    Levy, A.A.3    Barkai, N.4
  • 45
    • 34547137683 scopus 로고    scopus 로고
    • Comparison of C. elegans and C. briggsae genome sequences reveals extensive conservation of chromosome organization and synteny
    • doi: 10.1371/journal.pbio.0050167
    • Hillier LW, Miller RD, Baird SE, Chinwalla A, Fulton LA, et al. (2007) Comparison of C. elegans and C. briggsae genome sequences reveals extensive conservation of chromosome organization and synteny. PLoS Biol 5: e167 doi:10.1371/journal.pbio.0050167.
    • (2007) PLoS Biol , vol.5
    • Hillier, L.W.1    Miller, R.D.2    Baird, S.E.3    Chinwalla, A.4    Fulton, L.A.5
  • 46
    • 61849109937 scopus 로고    scopus 로고
    • Detecting heterozygosity in shotgun genome assemblies: Lessons from obligately outcrossing nematodes
    • doi: 10.1101/gr.081851.108.470
    • Barrière A, Yang S-P, Pekarek E, Thomas CG, Haag ES, et al. (2009) Detecting heterozygosity in shotgun genome assemblies: Lessons from obligately outcrossing nematodes. Genome Res 19: 470-480 doi:10.1101/gr.081851.108.470.
    • (2009) Genome Res , vol.19 , pp. 470-480
    • Barrière, A.1    Yang, S.-P.2    Pekarek, E.3    Thomas, C.G.4    Haag, E.S.5
  • 47
    • 0027402124 scopus 로고
    • The Gut Esterase Gene (ges-1) From the Nematodes Caenorhabditis elegans and Caenorhabditis briggsae
    • Kennedy BP, Aamodt EJ, Allen FL, Chung MA, Heschl MFP, et al. (1993) The Gut Esterase Gene (ges-1) From the Nematodes Caenorhabditis elegans and Caenorhabditis briggsae. J Mol Biol 229: 890-908.
    • (1993) J Mol Biol , vol.229 , pp. 890-908
    • Kennedy, B.P.1    Aamodt, E.J.2    Allen, F.L.3    Chung, M.A.4    Heschl, M.F.P.5
  • 48
    • 0030466944 scopus 로고    scopus 로고
    • Conservation of function and expression of unc-119 from two Caenorhabditis species despite divergence of non-coding DNA
    • Maduro MF, Pilgrim D, (1996) Conservation of function and expression of unc-119 from two Caenorhabditis species despite divergence of non-coding DNA. Gene 183: 77-85.
    • (1996) Gene , vol.183 , pp. 77-85
    • Maduro, M.F.1    Pilgrim, D.2
  • 49
    • 0242467199 scopus 로고    scopus 로고
    • Functional tests of enhancer conservation between distantly related species
    • doi: 10.1242/dev.00711
    • Ruvinsky I, Ruvkun G, (2003) Functional tests of enhancer conservation between distantly related species. Development 130: 5133-5142 doi:10.1242/dev.00711.
    • (2003) Development , vol.130 , pp. 5133-5142
    • Ruvinsky, I.1    Ruvkun, G.2
  • 50
    • 14744305048 scopus 로고    scopus 로고
    • The fmo genes of Caenorhabditis elegans and C. briggsae: characterisation, gene expression and comparative genomic analysis
    • doi: 10.1016/j.gene.2004.09.021
    • Petalcorin MIR, Joshua GW, Agapow P-M, Dolphin CT, (2005) The fmo genes of Caenorhabditis elegans and C. briggsae: characterisation, gene expression and comparative genomic analysis. Gene 346: 83-96 doi:10.1016/j.gene.2004.09.021.
    • (2005) Gene , vol.346 , pp. 83-96
    • Petalcorin, M.I.R.1    Joshua, G.W.2    Agapow, P.-M.3    Dolphin, C.T.4
  • 51
    • 58149185268 scopus 로고    scopus 로고
    • Dissection of lin-11 enhancer regions in Caenorhabditis elegans and other nematodes
    • doi: 10.1016/j.ydbio.2008.09.026
    • Marri S, Gupta BP, (2009) Dissection of lin-11 enhancer regions in Caenorhabditis elegans and other nematodes. Dev Biol 325: 402-411 doi:10.1016/j.ydbio.2008.09.026.
    • (2009) Dev Biol , vol.325 , pp. 402-411
    • Marri, S.1    Gupta, B.P.2
  • 52
    • 81355149268 scopus 로고    scopus 로고
    • A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits
    • doi: 10.1186/1471-2148-11-339
    • Kiontke KC, Félix M-A, Ailion M, Rockman M V, Braendle C, et al. (2011) A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits. BMC Evol Biol 11: 339 doi:10.1186/1471-2148-11-339.
    • (2011) BMC Evol Biol , vol.11 , pp. 339
    • Kiontke, K.C.1    Félix, M.-A.2    Ailion, M.3    Rockman, M.V.4    Braendle, C.5
  • 53
    • 2942669900 scopus 로고    scopus 로고
    • Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss
    • doi: 10.1073/pnas.0403094101
    • Kiontke K, Gavin NP, Raynes Y, Roehrig C, Piano F, et al. (2004) Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss. Proc Natl Acad Sci 101: 9003-9008 doi:10.1073/pnas.0403094101.
    • (2004) Proc Natl Acad Sci , vol.101 , pp. 9003-9008
    • Kiontke, K.1    Gavin, N.P.2    Raynes, Y.3    Roehrig, C.4    Piano, F.5
  • 55
    • 0033556159 scopus 로고    scopus 로고
    • The Caenorhabditis elegans gene unc-25 encodes glutamic acid decarboxylase and is required for synaptic transmission but not synaptic development
    • Jin Y, Jorgensen EM, Hartwieg E, Horvitz HR, (1999) The Caenorhabditis elegans gene unc-25 encodes glutamic acid decarboxylase and is required for synaptic transmission but not synaptic development. J Neurosci 19: 539-548.
    • (1999) J Neurosci , vol.19 , pp. 539-548
    • Jin, Y.1    Jorgensen, E.M.2    Hartwieg, E.3    Horvitz, H.R.4
  • 56
    • 34347357514 scopus 로고    scopus 로고
    • UNC-46 is required for trafficking of the vesicular GABA transporter
    • doi: 10.1038/nn1920
    • Schuske K, Palfreyman MT, Watanabe S, Jorgensen EM, (2007) UNC-46 is required for trafficking of the vesicular GABA transporter. Nat Neurosci 10: 846-853 doi:10.1038/nn1920.
    • (2007) Nat Neurosci , vol.10 , pp. 846-853
    • Schuske, K.1    Palfreyman, M.T.2    Watanabe, S.3    Jorgensen, E.M.4
  • 57
    • 0030734546 scopus 로고    scopus 로고
    • Identification and characterization of the vesicular GABA transporter
    • doi: 10.1038/39908
    • McIntire SL, Reimer RJ, Schuske K, Edwards RH, Jorgensen EM, (1997) Identification and characterization of the vesicular GABA transporter. Nature 389: 870-876 doi:10.1038/39908.
    • (1997) Nature , vol.389 , pp. 870-876
    • McIntire, S.L.1    Reimer, R.J.2    Schuske, K.3    Edwards, R.H.4    Jorgensen, E.M.5
  • 58
    • 13944278450 scopus 로고    scopus 로고
    • Expression profiling of GABAergic motor neurons in Caenorhabditis elegans
    • doi: 10.1016/j.cub.2005.02.025
    • Cinar H, Keles S, Jin Y, (2005) Expression profiling of GABAergic motor neurons in Caenorhabditis elegans. Curr Biol 15: 340-346 doi:10.1016/j.cub.2005.02.025.
    • (2005) Curr Biol , vol.15 , pp. 340-346
    • Cinar, H.1    Keles, S.2    Jin, Y.3
  • 59
    • 0032904017 scopus 로고    scopus 로고
    • The complete family of genes encoding G proteins of Caenorhabditis elegans
    • Jansen G, Thijssen K, Werner P, (1999) The complete family of genes encoding G proteins of Caenorhabditis elegans. Nat Genet 21: 414-419.
    • (1999) Nat Genet , vol.21 , pp. 414-419
    • Jansen, G.1    Thijssen, K.2    Werner, P.3
  • 60
    • 0035882491 scopus 로고    scopus 로고
    • Mutations in the Caenorhabditis elegans serotonin reuptake transporter MOD-5 reveal serotonin-dependent and -independent activities of fluoxetine
    • Ranganathan R, Sawin ER, Trent C, Horvitz HR, (2001) Mutations in the Caenorhabditis elegans serotonin reuptake transporter MOD-5 reveal serotonin-dependent and-independent activities of fluoxetine. J Neurosci 21: 5871-5884.
    • (2001) J Neurosci , vol.21 , pp. 5871-5884
    • Ranganathan, R.1    Sawin, E.R.2    Trent, C.3    Horvitz, H.R.4
  • 61
    • 34248393949 scopus 로고    scopus 로고
    • Evolution of Neuronal Patterning in Free-Living Rhabditid Nematodes I: Sex- Specific Serotonin-Containing Neurons
    • doi: 10.1002/cne
    • Loer CM, Rivard L, (2007) Evolution of Neuronal Patterning in Free-Living Rhabditid Nematodes I: Sex- Specific Serotonin-Containing Neurons. J Comp Neurol 502: 736-767 doi:10.1002/cne.
    • (2007) J Comp Neurol , vol.502 , pp. 736-767
    • Loer, C.M.1    Rivard, L.2
  • 62
    • 78650448343 scopus 로고    scopus 로고
    • 3-Ketoacyl thiolase delays aging of Caenorhabditis elegans and is required for lifespan extension mediated by sir-2.1
    • doi: 10.1073/pnas.1013854107
    • Berdichevsky A, Nedelcu S, Boulias K, Bishop NA, Guarente L, et al. (2010) 3-Ketoacyl thiolase delays aging of Caenorhabditis elegans and is required for lifespan extension mediated by sir-2.1. Proc Natl Acad Sci 107: 18927-18932 doi:10.1073/pnas.1013854107.
    • (2010) Proc Natl Acad Sci , vol.107 , pp. 18927-18932
    • Berdichevsky, A.1    Nedelcu, S.2    Boulias, K.3    Bishop, N.A.4    Guarente, L.5
  • 63
    • 33644616841 scopus 로고    scopus 로고
    • Polygenic control of Caenorhabditis elegans fat storage
    • doi: 10.1038/ng1739
    • Mak HY, Nelson LS, Basson M, Johnson CD, Ruvkun G, (2006) Polygenic control of Caenorhabditis elegans fat storage. Nat Genet 38: 363-368 doi:10.1038/ng1739.
    • (2006) Nat Genet , vol.38 , pp. 363-368
    • Mak, H.Y.1    Nelson, L.S.2    Basson, M.3    Johnson, C.D.4    Ruvkun, G.5
  • 65
    • 19344368645 scopus 로고    scopus 로고
    • Functional evolution of a cis-regulatory module
    • doi: 10.1371/journal.pbio.0030093
    • Ludwig MZ, Palsson A, Alekseeva E, Bergman CM, Nathan J, et al. (2005) Functional evolution of a cis-regulatory module. PLoS Biol 3: e93 doi:10.1371/journal.pbio.0030093.
    • (2005) PLoS Biol , vol.3
    • Ludwig, M.Z.1    Palsson, A.2    Alekseeva, E.3    Bergman, C.M.4    Nathan, J.5
  • 66
    • 56849103052 scopus 로고    scopus 로고
    • Evolution acts on enhancer organization to fine-tune gradient threshold readouts
    • doi: 10.1371/journal.pbio.0060263
    • Crocker J, Tamori Y, Erives A, (2008) Evolution acts on enhancer organization to fine-tune gradient threshold readouts. PLoS Biol 6: e263 doi:10.1371/journal.pbio.0060263.
    • (2008) PLoS Biol , vol.6
    • Crocker, J.1    Tamori, Y.2    Erives, A.3
  • 67
    • 84868272807 scopus 로고    scopus 로고
    • Dissecting sources of quantitative gene expression pattern divergence between Drosophila species
    • doi: 10.1038/msb.2012.35
    • Wunderlich Z, Bragdon MD, Eckenrode KB, Lydiard-Martin T, Pearl-Waserman S, et al. (2012) Dissecting sources of quantitative gene expression pattern divergence between Drosophila species. Mol Syst Biol 8: 604 doi:10.1038/msb.2012.35.
    • (2012) Mol Syst Biol , vol.8 , pp. 604
    • Wunderlich, Z.1    Bragdon, M.D.2    Eckenrode, K.B.3    Lydiard-Martin, T.4    Pearl-Waserman, S.5
  • 68
  • 69
    • 0025892045 scopus 로고
    • GABA-immunoreactive neurons in the nematode Ascaris
    • doi: 10.1002/cne.903070406
    • Guastella J, Johnson CD, Stretton AO, (1991) GABA-immunoreactive neurons in the nematode Ascaris. J Comp Neurol 307: 584-597 doi:10.1002/cne.903070406.
    • (1991) J Comp Neurol , vol.307 , pp. 584-597
    • Guastella, J.1    Johnson, C.D.2    Stretton, A.O.3
  • 70
    • 77649312862 scopus 로고    scopus 로고
    • A comparison of experience-dependent locomotory behaviors and biogenic amine neurons in nematode relatives of Caenorhabditis elegans
    • doi: 10.1186/1471-2202-11-22
    • Rivard L, Srinivasan J, Stone A, Ochoa S, Sternberg PW, et al. (2010) A comparison of experience-dependent locomotory behaviors and biogenic amine neurons in nematode relatives of Caenorhabditis elegans. BMC Neurosci 11: 22 doi:10.1186/1471-2202-11-22.
    • (2010) BMC Neurosci , vol.11 , pp. 22
    • Rivard, L.1    Srinivasan, J.2    Stone, A.3    Ochoa, S.4    Sternberg, P.W.5
  • 71
    • 77953010033 scopus 로고    scopus 로고
    • Regulatory divergence in Drosophila revealed by mRNA-seq
    • doi: 10.1101/gr.102491.109
    • McManus CJ, Coolon JD, O'Duff M, Eipper-Mains J, Graveley BR, et al. (2010) Regulatory divergence in Drosophila revealed by mRNA-seq. Genome Res 20: 816-825 doi:10.1101/gr.102491.109.
    • (2010) Genome Res , vol.20 , pp. 816-825
    • McManus, C.J.1    Coolon, J.D.2    O'Duff, M.3    Eipper-Mains, J.4    Graveley, B.R.5
  • 72
    • 80055096222 scopus 로고    scopus 로고
    • A conserved developmental patterning network produces quantitatively different output in multiple species of Drosophila
    • doi: 10.1371/journal.pgen.1002346
    • Fowlkes CC, Eckenrode KB, Bragdon MD, Meyer M, Wunderlich Z, et al. (2011) A conserved developmental patterning network produces quantitatively different output in multiple species of Drosophila. PLoS Genet 7: e1002346 doi:10.1371/journal.pgen.1002346.
    • (2011) PLoS Genet , vol.7
    • Fowlkes, C.C.1    Eckenrode, K.B.2    Bragdon, M.D.3    Meyer, M.4    Wunderlich, Z.5
  • 73
    • 38349018723 scopus 로고    scopus 로고
    • On the relation between promoter divergence and gene expression evolution
    • doi: 10.1038/msb4100198
    • Tirosh I, Weinberger A, Bezalel D, Kaganovich M, Barkai N, (2008) On the relation between promoter divergence and gene expression evolution. Mol Syst Biol 4: 159 doi:10.1038/msb4100198.
    • (2008) Mol Syst Biol , vol.4 , pp. 159
    • Tirosh, I.1    Weinberger, A.2    Bezalel, D.3    Kaganovich, M.4    Barkai, N.5
  • 74
    • 39049147650 scopus 로고    scopus 로고
    • Metrics of sequence constraint overlook regulatory sequences in an exhaustive analysis at phox2b
    • doi: 10.1101/gr.6929408.1
    • McGaughey DM, Vinton R, Huynh J, (2008) Metrics of sequence constraint overlook regulatory sequences in an exhaustive analysis at phox2b. Genome Res 18: 252-260 doi:10.1101/gr.6929408.1.
    • (2008) Genome Res , vol.18 , pp. 252-260
    • McGaughey, D.M.1    Vinton, R.2    Huynh, J.3
  • 75
    • 77957225928 scopus 로고    scopus 로고
    • The importance of being cis: evolution of orthologous fish and mammalian enhancer activity
    • doi: 10.1093/molbev/msq128
    • Ritter DI, Li Q, Kostka D, Pollard KS, Guo S, et al. (2010) The importance of being cis: evolution of orthologous fish and mammalian enhancer activity. Mol Biol Evol 27: 2322-2332 doi:10.1093/molbev/msq128.
    • (2010) Mol Biol Evol , vol.27 , pp. 2322-2332
    • Ritter, D.I.1    Li, Q.2    Kostka, D.3    Pollard, K.S.4    Guo, S.5
  • 76
    • 0032880773 scopus 로고    scopus 로고
    • Evolutionary alterations of the minimal promoter for notochord-specific Brachyury expression in ascidian embryos
    • Takahashi H, Mitani Y, Satoh G, Satoh N, (1999) Evolutionary alterations of the minimal promoter for notochord-specific Brachyury expression in ascidian embryos. Development 126: 3725-3734.
    • (1999) Development , vol.126 , pp. 3725-3734
    • Takahashi, H.1    Mitani, Y.2    Satoh, G.3    Satoh, N.4
  • 77
    • 17744380974 scopus 로고    scopus 로고
    • Making very similar embryos with divergent genomes: conservation of regulatory mechanisms of Otx between the ascidians Halocynthia roretzi and Ciona intestinalis
    • doi: 10.1242/dev.01707
    • Oda-Ishii I, Bertrand V, Matsuo I, Lemaire P, Saiga H, (2005) Making very similar embryos with divergent genomes: conservation of regulatory mechanisms of Otx between the ascidians Halocynthia roretzi and Ciona intestinalis. Development 132: 1663-1674 doi:10.1242/dev.01707.
    • (2005) Development , vol.132 , pp. 1663-1674
    • Oda-Ishii, I.1    Bertrand, V.2    Matsuo, I.3    Lemaire, P.4    Saiga, H.5
  • 78
    • 33644598453 scopus 로고    scopus 로고
    • A global definition of expression context is conserved between orthologs, but does not correlate with sequence conservation
    • doi: 10.1186/1471-2164-7-10
    • Dutilh BE, Huynen MA, Snel B, (2006) A global definition of expression context is conserved between orthologs, but does not correlate with sequence conservation. BMC Genomics 7: 10 doi:10.1186/1471-2164-7-10.
    • (2006) BMC Genomics , vol.7 , pp. 10
    • Dutilh, B.E.1    Huynen, M.A.2    Snel, B.3
  • 79
    • 33645833857 scopus 로고    scopus 로고
    • Conservation of RET regulatory function from human to zebrafish without sequence similarity
    • doi: 10.1126/science.1124070
    • Fisher S, Grice EA, Vinton RM, Bessling SL, McCallion AS, (2006) Conservation of RET regulatory function from human to zebrafish without sequence similarity. Science 312: 276-279 doi:10.1126/science.1124070.
    • (2006) Science , vol.312 , pp. 276-279
    • Fisher, S.1    Grice, E.A.2    Vinton, R.M.3    Bessling, S.L.4    McCallion, A.S.5
  • 80
    • 39049086371 scopus 로고    scopus 로고
    • Qualifying the relationship between sequence conservation and molecular function
    • doi: 10.1101/gr.7205808.4
    • Cooper GM, Brown CD, (2008) Qualifying the relationship between sequence conservation and molecular function. Genome Res 18: 201-205 doi:10.1101/gr.7205808.4.
    • (2008) Genome Res , vol.18 , pp. 201-205
    • Cooper, G.M.1    Brown, C.D.2
  • 81
    • 79959887501 scopus 로고    scopus 로고
    • Genome-wide identification of conserved regulatory function in diverged sequences
    • doi: 10.1101/gr.119016.110
    • Taher L, McGaughey DM, Maragh S, Aneas I, Bessling SL, et al. (2011) Genome-wide identification of conserved regulatory function in diverged sequences. Genome Res 21: 1139-1149 doi:10.1101/gr.119016.110.
    • (2011) Genome Res , vol.21 , pp. 1139-1149
    • Taher, L.1    McGaughey, D.M.2    Maragh, S.3    Aneas, I.4    Bessling, S.L.5
  • 82
    • 79960708456 scopus 로고    scopus 로고
    • Rapid Evolutionary Rewiring of a Structurally Constrained Eye Enhancer
    • doi: 10.1016/j.cub.2011.05.056
    • Swanson CI, Schwimmer DB, Barolo S, (2011) Rapid Evolutionary Rewiring of a Structurally Constrained Eye Enhancer. Curr Biol 21: 1-11 doi:10.1016/j.cub.2011.05.056.
    • (2011) Curr Biol , vol.21 , pp. 1-11
    • Swanson, C.I.1    Schwimmer, D.B.2    Barolo, S.3
  • 83
    • 84875082455 scopus 로고    scopus 로고
    • Conserved non-coding elements and cis regulation: actions speak louder than words
    • doi: 10.1242/dev.084459
    • Nelson AC, Wardle FC, (2013) Conserved non-coding elements and cis regulation: actions speak louder than words. Development 140: 1385-1395 doi:10.1242/dev.084459.
    • (2013) Development , vol.140 , pp. 1385-1395
    • Nelson, A.C.1    Wardle, F.C.2
  • 84
    • 79951548111 scopus 로고    scopus 로고
    • Changes in selective effects over time facilitate turnover of enhancer sequences
    • doi: 10.1534/genetics.110.121590
    • Bullaughey K, (2011) Changes in selective effects over time facilitate turnover of enhancer sequences. Genetics 187: 567-582 doi:10.1534/genetics.110.121590.
    • (2011) Genetics , vol.187 , pp. 567-582
    • Bullaughey, K.1
  • 85
    • 1642289044 scopus 로고    scopus 로고
    • Coordinate enhancers share common organizational features in the Drosophila genome
    • doi: 10.1073/pnas.0400611101
    • Erives A, Levine M, (2004) Coordinate enhancers share common organizational features in the Drosophila genome. Proc Natl Acad Sci 101: 3851-3856 doi:10.1073/pnas.0400611101.
    • (2004) Proc Natl Acad Sci , vol.101 , pp. 3851-3856
    • Erives, A.1    Levine, M.2
  • 86
    • 57149113552 scopus 로고    scopus 로고
    • A closer look at the eve stripe 2 enhancers of Drosophila and Themira
    • doi: 10.1371/journal.pgen.1000276
    • Crocker J, Erives A, (2008) A closer look at the eve stripe 2 enhancers of Drosophila and Themira. PLoS Genet 4: e1000276 doi:10.1371/journal.pgen.1000276.
    • (2008) PLoS Genet , vol.4
    • Crocker, J.1    Erives, A.2
  • 87
    • 76849088987 scopus 로고    scopus 로고
    • Functional characterization of transcription factor motifs using cross-species comparison across large evolutionary distances
    • doi: 10.1371/journal.pcbi.1000652
    • Kim J, Cunningham R, James B, Wyder S, Gibson JD, et al. (2010) Functional characterization of transcription factor motifs using cross-species comparison across large evolutionary distances. PLoS Comput Biol 6: e1000652 doi:10.1371/journal.pcbi.1000652.
    • (2010) PLoS Comput Biol , vol.6
    • Kim, J.1    Cunningham, R.2    James, B.3    Wyder, S.4    Gibson, J.D.5
  • 88
    • 77950580571 scopus 로고    scopus 로고
    • Structural rules and complex regulatory circuitry constrain expression of a Notch- and EGFR-regulated eye enhancer
    • doi: 10.1016/j.devcel.2009.12.026
    • Swanson CI, Evans NC, Barolo S, (2010) Structural rules and complex regulatory circuitry constrain expression of a Notch- and EGFR-regulated eye enhancer. Dev Cell 18: 359-370 doi:10.1016/j.devcel.2009.12.026.
    • (2010) Dev Cell , vol.18 , pp. 359-370
    • Swanson, C.I.1    Evans, N.C.2    Barolo, S.3
  • 89
    • 60549089720 scopus 로고    scopus 로고
    • Design flexibility in cis-regulatory control of gene expression: synthetic and comparative evidence
    • doi: 10.1016/j.ydbio.2008.12.020
    • Liberman LM, Stathopoulos A, (2009) Design flexibility in cis-regulatory control of gene expression: synthetic and comparative evidence. Dev Biol 327: 578-589 doi:10.1016/j.ydbio.2008.12.020.
    • (2009) Dev Biol , vol.327 , pp. 578-589
    • Liberman, L.M.1    Stathopoulos, A.2
  • 90
    • 33846813672 scopus 로고    scopus 로고
    • Detection of broadly expressed neuronal genes in C. elegans
    • doi: 10.1016/j.ydbio.2006.09.014
    • Ruvinsky I, Ohler U, Burge CB, Ruvkun G, (2007) Detection of broadly expressed neuronal genes in C. elegans. Dev Biol 302: 617-626 doi:10.1016/j.ydbio.2006.09.014.
    • (2007) Dev Biol , vol.302 , pp. 617-626
    • Ruvinsky, I.1    Ohler, U.2    Burge, C.B.3    Ruvkun, G.4
  • 91
    • 80054051689 scopus 로고    scopus 로고
    • Regulation of terminal differentiation programs in the nervous system
    • doi: 10.1146/annurev-cellbio-092910-154226
    • Hobert O, (2011) Regulation of terminal differentiation programs in the nervous system. Annu Rev Cell Dev Biol 27: 681-696 doi:10.1146/annurev-cellbio-092910-154226.
    • (2011) Annu Rev Cell Dev Biol , vol.27 , pp. 681-696
    • Hobert, O.1
  • 93
    • 59849107271 scopus 로고    scopus 로고
    • Is genetic evolution predictable?
    • Stern DL, Orgogozo V, (2009) Is genetic evolution predictable? Science 323: 746-751.
    • (2009) Science , vol.323 , pp. 746-751
    • Stern, D.L.1    Orgogozo, V.2
  • 94
    • 84855515046 scopus 로고    scopus 로고
    • Ancestral developmental potential facilitates parallel evolution in ants
    • doi: 10.1126/science.1211451
    • Rajakumar R, San Mauro D, Dijkstra MB, Huang MH, Wheeler DE, et al. (2012) Ancestral developmental potential facilitates parallel evolution in ants. Science 335: 79-82 doi:10.1126/science.1211451.
    • (2012) Science , vol.335 , pp. 79-82
    • Rajakumar, R.1    San Mauro, D.2    Dijkstra, M.B.3    Huang, M.H.4    Wheeler, D.E.5
  • 95
    • 84884631699 scopus 로고    scopus 로고
    • Recurrent modification of a conserved cis-regulatory element underlies fruit fly pigmentation diversity
    • doi: 10.1371/journal.pgen.1003740
    • Rogers WA, Salomone JR, Tacy DJ, Camino EM, Davis KA, et al. (2013) Recurrent modification of a conserved cis-regulatory element underlies fruit fly pigmentation diversity. PLoS Genet 9: e1003740 doi:10.1371/journal.pgen.1003740.
    • (2013) PLoS Genet , vol.9
    • Rogers, W.A.1    Salomone, J.R.2    Tacy, D.J.3    Camino, E.M.4    Davis, K.A.5
  • 97
    • 0028238895 scopus 로고
    • pha-1, a selectable marker for gene transfer in C. elegans
    • Granato M, Schnabel H, Schnabel R, (1994) pha-1, a selectable marker for gene transfer in C. elegans. Nucleic Acids Res 22: 1762-1763.
    • (1994) Nucleic Acids Res , vol.22 , pp. 1762-1763
    • Granato, M.1    Schnabel, H.2    Schnabel, R.3
  • 98
    • 0030903160 scopus 로고    scopus 로고
    • Distinct requirements for somatic and germline expression of a generally expressed Caenorhabditis elegans gene
    • Kelly W, Xu S, Montgomery M, Fire A, (1997) Distinct requirements for somatic and germline expression of a generally expressed Caenorhabditis elegans gene. Genetics 146: 227-238.
    • (1997) Genetics , vol.146 , pp. 227-238
    • Kelly, W.1    Xu, S.2    Montgomery, M.3    Fire, A.4
  • 99
    • 78649248933 scopus 로고    scopus 로고
    • Insights into species divergence and the evolution of hermaphroditism from fertile interspecies hybrids of Caenorhabditis nematodes
    • doi: 10.1534/genetics.110.120550
    • Woodruff GC, Eke O, Baird SE, Félix M-A, Haag ES, (2010) Insights into species divergence and the evolution of hermaphroditism from fertile interspecies hybrids of Caenorhabditis nematodes. Genetics 186: 997-1012 doi:10.1534/genetics.110.120550.
    • (2010) Genetics , vol.186 , pp. 997-1012
    • Woodruff, G.C.1    Eke, O.2    Baird, S.E.3    Félix, M.-A.4    Haag, E.S.5
  • 100
    • 79959850952 scopus 로고    scopus 로고
    • Distinct Functional Constraints Partition Sequence Conservation in a cis-Regulatory Element
    • doi: 10.1371/journal.pgen.1002095
    • Barrière A, Gordon KL, Ruvinsky I, (2011) Distinct Functional Constraints Partition Sequence Conservation in a cis-Regulatory Element. PLoS Genet 7: e1002095 doi:10.1371/journal.pgen.1002095.
    • (2011) PLoS Genet , vol.7
    • Barrière, A.1    Gordon, K.L.2    Ruvinsky, I.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.