Prediction of similarity acting cis-regulatory modules by subsequence profiling and comparative genomics in Drosophila melanogaster and D.pseudoobscura

Bioinformatics

Volumn 20, Issue 16, 2004, Pages 2738-2750

  Grad, Yonatan H ^a   Roth, Frederick P ^b   Halfon, Marc S ^c   Church, George M ^a  

^a Department of Genetics ^*  (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

^c UNIVERSITY AT BUFFALO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CIS ACTING ELEMENT; TRANSCRIPTION FACTOR;

ARTICLE; BINDING SITE; BLASTODERM; CONTROLLED STUDY; DNA FOOTPRINTING; DNA SEQUENCE; DROSOPHILA; DROSOPHILA MELANOGASTER; DROSOPHILA PSEUDOOBSCURA; ENHANCER REGION; GENE CONTROL; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE SEQUENCE; GENETIC ALGORITHM; GENETIC CONSERVATION; GENETIC SIMILARITY; GENOME ANALYSIS; INSECT DEVELOPMENT; METRIC SYSTEM; NONHUMAN; PHYLOGENY; PREDICTION; PRIORITY JOURNAL; PROBABILITY; REGULATORY SEQUENCE; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; UNTRANSLATED REGION; ALGORITHM; ANIMAL; CHROMOSOME MAP; CLASSIFICATION; COMPARATIVE STUDY; COMPUTER PROGRAM; CONSENSUS SEQUENCE; EVALUATION; GENE EXPRESSION REGULATION; GENETICS; METHODOLOGY; REGULATOR GENE; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY;

DROSOPHILA MELANOGASTER; MELANOGASTER;

ALGORITHMS; ANIMALS; CHROMOSOME MAPPING; CONSENSUS SEQUENCE; DNA FOOTPRINTING; DROSOPHILA; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, REGULATOR; PHYLOGENY; REGULATORY SEQUENCES, NUCLEIC ACID; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SOFTWARE; SPECIES SPECIFICITY;

EID: 8844270153     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bth320     Document Type: Article

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