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Volumn 325, Issue 2, 2009, Pages 402-411

Dissection of lin-11 enhancer regions in Caenorhabditis elegans and other nematodes

Author keywords

C. brenneri; C. briggsae; C. elegans; C. remanei; Comparative study; Gene regulation; LIM homeobox; Lin 11; Nematode; Vulva

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR EGL 43; TRANSCRIPTION FACTOR FOS 1; TRANSCRIPTION FACTOR LAG 1; TRANSCRIPTION FACTOR LIN 12; UNCLASSIFIED DRUG;

EID: 58149185268     PISSN: 00121606     EISSN: 1095564X     Source Type: Journal    
DOI: 10.1016/j.ydbio.2008.09.026     Document Type: Article
Times cited : (14)

References (47)
  • 1
    • 38549152361 scopus 로고    scopus 로고
    • Natural variation and population genetics of Caenorhabditis elegans
    • Fitch D.H. (Ed), Wormbook vol. doi/10.1895/wormbook.1.43.1.
    • Barriere A., and Felix M.A. Natural variation and population genetics of Caenorhabditis elegans. In: Fitch D.H. (Ed). The C. elegans Research Community (2005), Wormbook 1-19 vol. doi/10.1895/wormbook.1.43.1.
    • (2005) The C. elegans Research Community , pp. 1-19
    • Barriere, A.1    Felix, M.A.2
  • 2
    • 38449085733 scopus 로고    scopus 로고
    • Isolation of C. elegans and related nematodes
    • T.C.e.R. Community (Ed), WormBook
    • Barriere A., and Felix M.A. Isolation of C. elegans and related nematodes. In: T.C.e.R. Community (Ed). WormBook (2006), WormBook
    • (2006) WormBook
    • Barriere, A.1    Felix, M.A.2
  • 3
    • 38449099892 scopus 로고    scopus 로고
    • Reporter gene fusions
    • T.C.e.R. Community (Ed), WormBook
    • Boulin T., Etchberger J.F., and Hobert O. Reporter gene fusions. In: T.C.e.R. Community (Ed). WormBook (2006), WormBook
    • (2006) WormBook
    • Boulin, T.1    Etchberger, J.F.2    Hobert, O.3
  • 4
    • 0016063911 scopus 로고
    • The genetics of Caenorhabditis elegans
    • Brenner S. The genetics of Caenorhabditis elegans. Genetics 77 (1974) 71-94
    • (1974) Genetics , vol.77 , pp. 71-94
    • Brenner, S.1
  • 5
    • 0028090045 scopus 로고
    • Inhibition of the DNA-binding activity of Drosophila suppressor of hairless and of its human homolog, KBF2/RBP-J kappa, by direct protein-protein interaction with Drosophila hairless
    • Brou C., Logeat F., Lecourtois M., Vandekerckhove J., Kourilsky P., Schweisguth F., and Israel A. Inhibition of the DNA-binding activity of Drosophila suppressor of hairless and of its human homolog, KBF2/RBP-J kappa, by direct protein-protein interaction with Drosophila hairless. Genes Dev. 8 (1994) 2491-2503
    • (1994) Genes Dev. , vol.8 , pp. 2491-2503
    • Brou, C.1    Logeat, F.2    Lecourtois, M.3    Vandekerckhove, J.4    Kourilsky, P.5    Schweisguth, F.6    Israel, A.7
  • 7
    • 0030014642 scopus 로고    scopus 로고
    • lag-1, a gene required for lin-12 and glp-1 signaling in Caenorhabditis elegans, is homologous to human CBF1 and Drosophila Su(H)
    • Christensen S., Kodoyianni V., Bosenberg M., Friedman L., and Kimble J. lag-1, a gene required for lin-12 and glp-1 signaling in Caenorhabditis elegans, is homologous to human CBF1 and Drosophila Su(H). Development 122 (1996) 1373-1383
    • (1996) Development , vol.122 , pp. 1373-1383
    • Christensen, S.1    Kodoyianni, V.2    Bosenberg, M.3    Friedman, L.4    Kimble, J.5
  • 8
    • 0037403529 scopus 로고    scopus 로고
    • Cis regulatory requirements for vulval cell-specific expression of the Caenorhabditis elegans fibroblast growth factor gene egl-17
    • Cui M., and Han M. Cis regulatory requirements for vulval cell-specific expression of the Caenorhabditis elegans fibroblast growth factor gene egl-17. Dev. Biol.. 257 (2003) 104-116
    • (2003) Dev. Biol.. , vol.257 , pp. 104-116
    • Cui, M.1    Han, M.2
  • 9
    • 0030840464 scopus 로고    scopus 로고
    • STATs and gene regulation
    • Darnell Jr. J.E. STATs and gene regulation. Science 277 (1997) 1630-1635
    • (1997) Science , vol.277 , pp. 1630-1635
    • Darnell Jr., J.E.1
  • 10
    • 0035337014 scopus 로고    scopus 로고
    • Polymorphism and evolution of vulval precursor cell lineages within two nematode genera, Caenorhabditis and Oscheius
    • Delattre M., and Felix M.A. Polymorphism and evolution of vulval precursor cell lineages within two nematode genera, Caenorhabditis and Oscheius. Curr Biol. 11 (2001) 631-643
    • (2001) Curr Biol. , vol.11 , pp. 631-643
    • Delattre, M.1    Felix, M.A.2
  • 11
    • 0035794217 scopus 로고    scopus 로고
    • DNA binding specificity of different STAT proteins. Comparison of in vitro specificity with natural target sites
    • Ehret G.B., Reichenbach P., Schindler U., Horvath C.M., Fritz S., Nabholz M., and Bucher P. DNA binding specificity of different STAT proteins. Comparison of in vitro specificity with natural target sites. J. Biol. Chem. 276 (2001) 6675-6688
    • (2001) J. Biol. Chem. , vol.276 , pp. 6675-6688
    • Ehret, G.B.1    Reichenbach, P.2    Schindler, U.3    Horvath, C.M.4    Fritz, S.5    Nabholz, M.6    Bucher, P.7
  • 12
    • 33846223791 scopus 로고    scopus 로고
    • Cryptic quantitative evolution of the vulva intercellular signaling network in Caenorhabditis
    • Felix M.A. Cryptic quantitative evolution of the vulva intercellular signaling network in Caenorhabditis. Curr Biol. 17 (2007) 103-114
    • (2007) Curr Biol. , vol.17 , pp. 103-114
    • Felix, M.A.1
  • 13
    • 0022065262 scopus 로고
    • Identification and characterization of 22 genes that affect the vulval cell lineages of the nematode Caenorhabditis elegans
    • Ferguson E.L., and Horvitz H.R. Identification and characterization of 22 genes that affect the vulval cell lineages of the nematode Caenorhabditis elegans. Genetics 110 (1985) 17-72
    • (1985) Genetics , vol.110 , pp. 17-72
    • Ferguson, E.L.1    Horvitz, H.R.2
  • 14
    • 0023090512 scopus 로고
    • A genetic pathway for the specification of the vulval cell lineages of Caenorhabditis elegans
    • Ferguson E.L., Sternberg P.W., and Horvitz H.R. A genetic pathway for the specification of the vulval cell lineages of Caenorhabditis elegans. Nature 326 (1987) 259-267
    • (1987) Nature , vol.326 , pp. 259-267
    • Ferguson, E.L.1    Sternberg, P.W.2    Horvitz, H.R.3
  • 15
    • 0025328511 scopus 로고
    • Novel cysteine-rich motif and homeodomain in the product of the Caenorhabditis elegans cell lineage gene lin-11
    • Freyd G., Kim S.K., and Horvitz H.R. Novel cysteine-rich motif and homeodomain in the product of the Caenorhabditis elegans cell lineage gene lin-11. Nature 344 (1990) 876-879
    • (1990) Nature , vol.344 , pp. 876-879
    • Freyd, G.1    Kim, S.K.2    Horvitz, H.R.3
  • 16
    • 0027407965 scopus 로고
    • Cell interactions control the direction of outgrowth, branching and fasciculation of the HSN axons of Caenorhabditis elegans
    • Garriga G., Desai C., and Horvitz H.R. Cell interactions control the direction of outgrowth, branching and fasciculation of the HSN axons of Caenorhabditis elegans. Development. 117 (1993) 1071-1087
    • (1993) Development. , vol.117 , pp. 1071-1087
    • Garriga, G.1    Desai, C.2    Horvitz, H.R.3
  • 17
    • 0027424557 scopus 로고
    • Migrations of the Caenorhabditis elegans HSNs are regulated by egl-43, a gene encoding two zinc finger proteins
    • Garriga G., Guenther C., and Horvitz H.R. Migrations of the Caenorhabditis elegans HSNs are regulated by egl-43, a gene encoding two zinc finger proteins. Genes Dev. 7 (1993) 2097-2109
    • (1993) Genes Dev. , vol.7 , pp. 2097-2109
    • Garriga, G.1    Guenther, C.2    Horvitz, H.R.3
  • 18
    • 0036079931 scopus 로고    scopus 로고
    • Tissue-specific regulation of the LIM homeobox gene lin-11 during development of the Caenorhabditis elegans egg-laying system
    • Gupta B.P., and Sternberg P.W. Tissue-specific regulation of the LIM homeobox gene lin-11 during development of the Caenorhabditis elegans egg-laying system. Dev. Biol. 247 (2002) 102-115
    • (2002) Dev. Biol. , vol.247 , pp. 102-115
    • Gupta, B.P.1    Sternberg, P.W.2
  • 19
    • 0042913254 scopus 로고    scopus 로고
    • The C. elegans LIM homeobox gene lin-11 specifies multiple cell fates during vulval development
    • Gupta B.P., Wang M., and Sternberg P.W. The C. elegans LIM homeobox gene lin-11 specifies multiple cell fates during vulval development. Development 130 (2003) 2589-2601
    • (2003) Development , vol.130 , pp. 2589-2601
    • Gupta, B.P.1    Wang, M.2    Sternberg, P.W.3
  • 20
    • 0034141791 scopus 로고    scopus 로고
    • Functions of LIM-homeobox genes
    • Hobert O., and Westphal H. Functions of LIM-homeobox genes. Trends Genet. 16 (2000) 75-83
    • (2000) Trends Genet. , vol.16 , pp. 75-83
    • Hobert, O.1    Westphal, H.2
  • 21
    • 0032520848 scopus 로고    scopus 로고
    • Control of neural development and function in a thermoregulatory network by the LIM homeobox gene lin-11
    • Hobert O., D, Alberti T., Liu Y., and Ruvkun G. Control of neural development and function in a thermoregulatory network by the LIM homeobox gene lin-11. J. Neurosci. 18 (1998) 2084-2096
    • (1998) J. Neurosci. , vol.18 , pp. 2084-2096
    • Hobert, O.1    D'Alberti, T.2    Liu, Y.3    Ruvkun, G.4
  • 22
    • 33947331364 scopus 로고    scopus 로고
    • C. elegans EVI1 proto-oncogene, EGL-43, is necessary for Notch-mediated cell fate specification and regulates cell invasion
    • Hwang B.J., Meruelo A.D., and Sternberg P.W. C. elegans EVI1 proto-oncogene, EGL-43, is necessary for Notch-mediated cell fate specification and regulates cell invasion. Development 134 (2007) 669-679
    • (2007) Development , vol.134 , pp. 669-679
    • Hwang, B.J.1    Meruelo, A.D.2    Sternberg, P.W.3
  • 24
    • 0342859320 scopus 로고    scopus 로고
    • The EVI-1 gene-its role in pathoenesis of human leukemias
    • Jolkowska J., and Witt M. The EVI-1 gene-its role in pathoenesis of human leukemias. Leuk. Res. 24 (2000) 553-558
    • (2000) Leuk. Res. , vol.24 , pp. 553-558
    • Jolkowska, J.1    Witt, M.2
  • 25
    • 23744479098 scopus 로고    scopus 로고
    • Functional constraint and divergence in the G protein family in Caenorhabditis elegans and Caenorhabditis briggsae
    • Jovelin R., and Phillips P.C. Functional constraint and divergence in the G protein family in Caenorhabditis elegans and Caenorhabditis briggsae. Mol. Genet. Genomics 273 (2005) 299-310
    • (2005) Mol. Genet. Genomics , vol.273 , pp. 299-310
    • Jovelin, R.1    Phillips, P.C.2
  • 26
    • 0030908162 scopus 로고    scopus 로고
    • Differential functional significance of AP-1 binding sites in the promoter of the gene encoding mouse tissue inhibitor of metalloproteinases-3
    • Kim H., Pennie W.D., Sun Y., and Colburn N.H. Differential functional significance of AP-1 binding sites in the promoter of the gene encoding mouse tissue inhibitor of metalloproteinases-3. Biochem J. 324 Pt 2 (1997) 547-553
    • (1997) Biochem J. , vol.324 , Issue.PART 2 , pp. 547-553
    • Kim, H.1    Pennie, W.D.2    Sun, Y.3    Colburn, N.H.4
  • 27
    • 38549117942 scopus 로고    scopus 로고
    • The phylogenetic relationships of Caenorhabditis and other rhabditids
    • T.C.e.R. Community (Ed), WormBook
    • Kiontke K., and Fitch D.H.A. The phylogenetic relationships of Caenorhabditis and other rhabditids. In: T.C.e.R. Community (Ed). WormBook (2005), WormBook
    • (2005) WormBook
    • Kiontke, K.1    Fitch, D.H.A.2
  • 28
    • 38449115407 scopus 로고    scopus 로고
    • Ecology of Caenorhabditis species
    • W. The C. elegans Research Community (Ed), Wormbook vol. doi/10.1895/wormbook.1.37.1.
    • Kiontke K., and Sudhaus W. Ecology of Caenorhabditis species. In: W. The C. elegans Research Community (Ed). Wormbook (2006), Wormbook 1-14 vol. doi/10.1895/wormbook.1.37.1.
    • (2006) Wormbook , pp. 1-14
    • Kiontke, K.1    Sudhaus, W.2
  • 30
    • 0037404073 scopus 로고    scopus 로고
    • cis-Regulatory control of three cell fate-specific genes in vulval organogenesis of Caenorhabditis elegans and C. briggsae
    • Kirouac M., and Sternberg P.W. cis-Regulatory control of three cell fate-specific genes in vulval organogenesis of Caenorhabditis elegans and C. briggsae. Dev. Biol. 257 (2003) 85-103
    • (2003) Dev. Biol. , vol.257 , pp. 85-103
    • Kirouac, M.1    Sternberg, P.W.2
  • 31
    • 20744444226 scopus 로고    scopus 로고
    • Cloning and expression analysis of pos-1 in the nematodes Caenorhabditis briggsae and Caenorhabditis remanei
    • Konwerski J., Senchuk M., Petty E., Lahaie D., and Schisa J.A. Cloning and expression analysis of pos-1 in the nematodes Caenorhabditis briggsae and Caenorhabditis remanei. Dev. Dyn. 233 (2005) 1006-1012
    • (2005) Dev. Dyn. , vol.233 , pp. 1006-1012
    • Konwerski, J.1    Senchuk, M.2    Petty, E.3    Lahaie, D.4    Schisa, J.A.5
  • 32
    • 0028818537 scopus 로고
    • Identification and cloning of unc-119, a gene expressed in the Caenorhabditis elegans nervous system
    • Maduro M., and Pilgrim D. Identification and cloning of unc-119, a gene expressed in the Caenorhabditis elegans nervous system. Genetics 141 (1995) 977-988
    • (1995) Genetics , vol.141 , pp. 977-988
    • Maduro, M.1    Pilgrim, D.2
  • 33
    • 0025942107 scopus 로고
    • Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration of transforming sequences
    • Mello C.C., Kramer J.M., Stinchcomb D., and Ambros V. Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration of transforming sequences. EMBO J. 10 (1991) 3959-3970
    • (1991) EMBO J. , vol.10 , pp. 3959-3970
    • Mello, C.C.1    Kramer, J.M.2    Stinchcomb, D.3    Ambros, V.4
  • 34
    • 0033377086 scopus 로고    scopus 로고
    • The lin-11 LIM domain transcription factor is necessary for morphogenesis of C. elegans uterine cells
    • Newman A.P., Acton G.Z., Hartwieg E., Horvitz H.R., and Sternberg P.W. The lin-11 LIM domain transcription factor is necessary for morphogenesis of C. elegans uterine cells. Development 126 (1999) 5319-5326
    • (1999) Development , vol.126 , pp. 5319-5326
    • Newman, A.P.1    Acton, G.Z.2    Hartwieg, E.3    Horvitz, H.R.4    Sternberg, P.W.5
  • 35
    • 37249027314 scopus 로고    scopus 로고
    • Co-regulation by Notch and Fos is required for cell fate specification of intermediate precursors during C. elegans uterine development
    • Oommen K.S., and Newman A.P. Co-regulation by Notch and Fos is required for cell fate specification of intermediate precursors during C. elegans uterine development. Development 134 (2007) 3999-4009
    • (2007) Development , vol.134 , pp. 3999-4009
    • Oommen, K.S.1    Newman, A.P.2
  • 36
    • 34447643070 scopus 로고    scopus 로고
    • Regulation of anchor cell invasion and uterine cell fates by the egl-43 Evi-1 proto-oncogene in Caenorhabditis elegans
    • Rimann I., and Hajnal A. Regulation of anchor cell invasion and uterine cell fates by the egl-43 Evi-1 proto-oncogene in Caenorhabditis elegans. Dev. Biol. 308 (2007) 187-195
    • (2007) Dev. Biol. , vol.308 , pp. 187-195
    • Rimann, I.1    Hajnal, A.2
  • 37
    • 0041677607 scopus 로고    scopus 로고
    • Conservation of Endo16 expression in sea urchins despite evolutionary divergence in both cis and trans-acting components of transcriptional regulation
    • Romano L.A., and Wray G.A. Conservation of Endo16 expression in sea urchins despite evolutionary divergence in both cis and trans-acting components of transcriptional regulation. Development 130 (2003) 4187-4199
    • (2003) Development , vol.130 , pp. 4187-4199
    • Romano, L.A.1    Wray, G.A.2
  • 39
    • 0027213431 scopus 로고
    • Isolation and characterization of mutations causing abnormal eversion of the vulva in Caenorhabditis elegans
    • Seydoux G., Savage C., and Greenwald I. Isolation and characterization of mutations causing abnormal eversion of the vulva in Caenorhabditis elegans. Dev Biol. 157 (1993) 423-436
    • (1993) Dev Biol. , vol.157 , pp. 423-436
    • Seydoux, G.1    Savage, C.2    Greenwald, I.3
  • 40
    • 20444370674 scopus 로고    scopus 로고
    • FOS-1 promotes basement-membrane removal during anchor-cell invasion in C. elegans
    • Sherwood D.R., Butler J.A., Kramer J.M., and Sternberg P.W. FOS-1 promotes basement-membrane removal during anchor-cell invasion in C. elegans. Cell 121 (2005) 951-962
    • (2005) Cell , vol.121 , pp. 951-962
    • Sherwood, D.R.1    Butler, J.A.2    Kramer, J.M.3    Sternberg, P.W.4
  • 41
    • 85029435414 scopus 로고    scopus 로고
    • WormBook
    • T.C.e.R. Community (Ed), WormBook
    • Sternberg P.W. WormBook. In: T.C.e.R. Community (Ed). Vulval development (2005), WormBook
    • (2005) Vulval development
    • Sternberg, P.W.1
  • 42
    • 9944238960 scopus 로고    scopus 로고
    • Dissection of cis-regulatory elements in the C. elegans Hox gene egl-5 promoter
    • Teng Y., Girard L., Ferreira H.B., Sternberg P.W., and Emmons S.W. Dissection of cis-regulatory elements in the C. elegans Hox gene egl-5 promoter. Dev. Biol. 276 (2004) 476-492
    • (2004) Dev. Biol. , vol.276 , pp. 476-492
    • Teng, Y.1    Girard, L.2    Ferreira, H.B.3    Sternberg, P.W.4    Emmons, S.W.5
  • 43
    • 0035941485 scopus 로고    scopus 로고
    • Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans
    • Timmons L., Court D.L., and Fire A. Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans. Gene 263 (2001) 103-112
    • (2001) Gene , vol.263 , pp. 103-112
    • Timmons, L.1    Court, D.L.2    Fire, A.3
  • 45
    • 30044436216 scopus 로고    scopus 로고
    • C. elegans STAT cooperates with DAF-7/TGF-beta signaling to repress dauer formation
    • Wang Y., and Levy D.E. C. elegans STAT cooperates with DAF-7/TGF-beta signaling to repress dauer formation. Curr. Biol. 16 (2006) 89-94
    • (2006) Curr. Biol. , vol.16 , pp. 89-94
    • Wang, Y.1    Levy, D.E.2
  • 46
    • 0004291817 scopus 로고
    • Wood W.B. (Ed), Cold Spring Harbor Laboratory Press, Cold Spring Harbor New York
    • In: Wood W.B. (Ed). The Nematode Caenorhabditis elegans (1988), Cold Spring Harbor Laboratory Press, Cold Spring Harbor New York
    • (1988) The Nematode Caenorhabditis elegans
  • 47
    • 0036608206 scopus 로고    scopus 로고
    • Patchy interspecific sequence similarities efficiently identify positive cis-regulatory elements in the sea urchin
    • Yuh C.H., Brown C.T., Livi C.B., Rowen L., Clarke P.J., and Davidson E.H. Patchy interspecific sequence similarities efficiently identify positive cis-regulatory elements in the sea urchin. Dev. Biol. 246 (2002) 148-161
    • (2002) Dev. Biol. , vol.246 , pp. 148-161
    • Yuh, C.H.1    Brown, C.T.2    Livi, C.B.3    Rowen, L.4    Clarke, P.J.5    Davidson, E.H.6


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