-
1
-
-
78049332872
-
Colorectal cancer epidemiology: incidence, mortality, survival, and risk factors
-
Haggar F.A., Boushey R.P. Colorectal cancer epidemiology: incidence, mortality, survival, and risk factors. Clin Colon Rectal Surg 2009, 22:191-197.
-
(2009)
Clin Colon Rectal Surg
, vol.22
, pp. 191-197
-
-
Haggar, F.A.1
Boushey, R.P.2
-
2
-
-
79952232216
-
Global cancer statistics
-
Jemal A., Bray F., Center M.M., Ferlay J., et al. Global cancer statistics. CA Cancer J Clin 2011, 61:69-90.
-
(2011)
CA Cancer J Clin
, vol.61
, pp. 69-90
-
-
Jemal, A.1
Bray, F.2
Center, M.M.3
Ferlay, J.4
-
3
-
-
75449102004
-
Colorectal cancer screening in Europe
-
Zavoral M., Suchanek S., Zavada F., Dusek L., et al. Colorectal cancer screening in Europe. World J Gastroenterol 2009, 15:5907-5915.
-
(2009)
World J Gastroenterol
, vol.15
, pp. 5907-5915
-
-
Zavoral, M.1
Suchanek, S.2
Zavada, F.3
Dusek, L.4
-
4
-
-
77952305365
-
Roles for inflammation and regulatory T cells in colon cancer
-
Erdman S.E., Poutahidis T. Roles for inflammation and regulatory T cells in colon cancer. Toxicol Pathol 2009, 38:76-87.
-
(2009)
Toxicol Pathol
, vol.38
, pp. 76-87
-
-
Erdman, S.E.1
Poutahidis, T.2
-
5
-
-
78650828652
-
Helicobacter hepaticus infection in mice: models for understanding lower bowel inflammation and cancer
-
Fox J.G., Ge Z., Whary M.T., Erdman S.E., Horwitz B.H. Helicobacter hepaticus infection in mice: models for understanding lower bowel inflammation and cancer. Mucosal Immunol 2010, 4:22-30.
-
(2010)
Mucosal Immunol
, vol.4
, pp. 22-30
-
-
Fox, J.G.1
Ge, Z.2
Whary, M.T.3
Erdman, S.E.4
Horwitz, B.H.5
-
8
-
-
0029833872
-
Hereditary nonpolyposis colorectal cancer (Lynch syndrome). An updated review
-
Lynch H.T., Smyrk T. Hereditary nonpolyposis colorectal cancer (Lynch syndrome). An updated review. Cancer 1996, 78:1149-1167.
-
(1996)
Cancer
, vol.78
, pp. 1149-1167
-
-
Lynch, H.T.1
Smyrk, T.2
-
9
-
-
0025312728
-
A genetic model for colorectal tumorigenesis
-
Fearon E.R., Vogelstein B. A genetic model for colorectal tumorigenesis. Cell 1990, 61:759-767.
-
(1990)
Cell
, vol.61
, pp. 759-767
-
-
Fearon, E.R.1
Vogelstein, B.2
-
10
-
-
72449176846
-
Molecular origins of cancer: molecular basis of colorectal cancer
-
Markowitz S.D., Bertagnolli M.M. Molecular origins of cancer: molecular basis of colorectal cancer. N Engl J Med 2009, 361:2449-2460.
-
(2009)
N Engl J Med
, vol.361
, pp. 2449-2460
-
-
Markowitz, S.D.1
Bertagnolli, M.M.2
-
11
-
-
0033105411
-
Genetic pathways in colorectal and other cancers
-
Ilyas M., Straub J., Tomlinson I.P., Bodmer W.F. Genetic pathways in colorectal and other cancers. Eur J Cancer 1999, 35:335-351.
-
(1999)
Eur J Cancer
, vol.35
, pp. 335-351
-
-
Ilyas, M.1
Straub, J.2
Tomlinson, I.P.3
Bodmer, W.F.4
-
12
-
-
84865391382
-
Molecular pathways in colorectal cancer
-
Al-Sohaily S., Biankin A., Leong R., Kohonen-Corish M., Warusavitarne J. Molecular pathways in colorectal cancer. J Gastroenterol Hepatol 2012, 27:1423-1431.
-
(2012)
J Gastroenterol Hepatol
, vol.27
, pp. 1423-1431
-
-
Al-Sohaily, S.1
Biankin, A.2
Leong, R.3
Kohonen-Corish, M.4
Warusavitarne, J.5
-
13
-
-
0037047057
-
Mutations in APC, Kirsten-ras, and p53-alternative genetic pathways to colorectal cancer
-
Smith G., Carey F.A., Beattie J., Wilkie M.J., et al. Mutations in APC, Kirsten-ras, and p53-alternative genetic pathways to colorectal cancer. Proc Natl Acad Sci U S A 2002, 99:9433-9438.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 9433-9438
-
-
Smith, G.1
Carey, F.A.2
Beattie, J.3
Wilkie, M.J.4
-
14
-
-
0031216554
-
Molecular biology of colorectal cancer
-
Gryfe R., Swallow C., Bapat B., Redston M., et al. Molecular biology of colorectal cancer. Curr Probl Cancer 1997, 21:233-300.
-
(1997)
Curr Probl Cancer
, vol.21
, pp. 233-300
-
-
Gryfe, R.1
Swallow, C.2
Bapat, B.3
Redston, M.4
-
15
-
-
0037348455
-
APC, beta-Catenin and hTCF-4; an unholy trinity in the genesis of colorectal cancer
-
Bright-Thomas R.M., Hargest R. APC, beta-Catenin and hTCF-4; an unholy trinity in the genesis of colorectal cancer. Eur J Surg Oncol 2003, 29:107-117.
-
(2003)
Eur J Surg Oncol
, vol.29
, pp. 107-117
-
-
Bright-Thomas, R.M.1
Hargest, R.2
-
16
-
-
0028228920
-
The DCC gene product in cellular differentiation and colorectal tumorigenesis
-
Hedrick L., Cho K.R., Fearon E.R., Wu T.C., et al. The DCC gene product in cellular differentiation and colorectal tumorigenesis. Genes Dev 1994, 8:1174-1183.
-
(1994)
Genes Dev
, vol.8
, pp. 1174-1183
-
-
Hedrick, L.1
Cho, K.R.2
Fearon, E.R.3
Wu, T.C.4
-
17
-
-
32544444419
-
The TP53 colorectal cancer international collaborative study on the prognostic and predictive significance of p53 mutation: influence of tumor site, type of mutation, and adjuvant treatment
-
Russo A., Bazan V., Iacopetta B., Kerr D., et al. The TP53 colorectal cancer international collaborative study on the prognostic and predictive significance of p53 mutation: influence of tumor site, type of mutation, and adjuvant treatment. J Clin Oncol 2005, 23:7518-7528.
-
(2005)
J Clin Oncol
, vol.23
, pp. 7518-7528
-
-
Russo, A.1
Bazan, V.2
Iacopetta, B.3
Kerr, D.4
-
18
-
-
77449130761
-
Microsatellite instability in colorectal cancer
-
[e2073]
-
Boland C.R., Goel A. Microsatellite instability in colorectal cancer. Gastroenterology 2010, 138:2073-2087. [e2073].
-
(2010)
Gastroenterology
, vol.138
, pp. 2073-2087
-
-
Boland, C.R.1
Goel, A.2
-
19
-
-
0033953674
-
Optimising methods for determining RER status in colorectal cancers
-
Stone J.G., Tomlinson I.P., Houlston R.S. Optimising methods for determining RER status in colorectal cancers. Cancer Lett 2000, 149:15-20.
-
(2000)
Cancer Lett
, vol.149
, pp. 15-20
-
-
Stone, J.G.1
Tomlinson, I.P.2
Houlston, R.S.3
-
20
-
-
78349311747
-
Cancer secretomics reveal pathophysiological pathways in cancer molecular oncology
-
Karagiannis G.S., Pavlou M.P., Diamandis E.P. Cancer secretomics reveal pathophysiological pathways in cancer molecular oncology. Mol Oncol 2010, 4:496-510.
-
(2010)
Mol Oncol
, vol.4
, pp. 496-510
-
-
Karagiannis, G.S.1
Pavlou, M.P.2
Diamandis, E.P.3
-
21
-
-
77951623830
-
Integrating high-throughput technologies in the quest for effective biomarkers for ovarian cancer
-
Kulasingam V., Pavlou M.P., Diamandis E.P. Integrating high-throughput technologies in the quest for effective biomarkers for ovarian cancer. Nat Rev Cancer 2010, 10:371-378.
-
(2010)
Nat Rev Cancer
, vol.10
, pp. 371-378
-
-
Kulasingam, V.1
Pavlou, M.P.2
Diamandis, E.P.3
-
22
-
-
46849107938
-
Innovations, challenges and future prospects of oncoproteomics
-
Jain K.K. Innovations, challenges and future prospects of oncoproteomics. Mol Oncol 2008, 2:153-160.
-
(2008)
Mol Oncol
, vol.2
, pp. 153-160
-
-
Jain, K.K.1
-
23
-
-
0033818171
-
Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome
-
Tjalsma H., Bolhuis A., Jongbloed J.D., Bron S., van Dijl J.M. Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome. Microbiol Mol Biol Rev 2000, 64:515-547.
-
(2000)
Microbiol Mol Biol Rev
, vol.64
, pp. 515-547
-
-
Tjalsma, H.1
Bolhuis, A.2
Jongbloed, J.D.3
Bron, S.4
van Dijl, J.M.5
-
24
-
-
0034821694
-
A proteomic view on genome-based signal peptide predictions
-
Antelmann H., Tjalsma H., Voigt B., Ohlmeier S., et al. A proteomic view on genome-based signal peptide predictions. Genome Res 2001, 11:1484-1502.
-
(2001)
Genome Res
, vol.11
, pp. 1484-1502
-
-
Antelmann, H.1
Tjalsma, H.2
Voigt, B.3
Ohlmeier, S.4
-
25
-
-
63549137674
-
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue
-
Desvaux M., Hebraud M., Talon R., Henderson I.R. Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue. Trends Microbiol 2009, 17:139-145.
-
(2009)
Trends Microbiol
, vol.17
, pp. 139-145
-
-
Desvaux, M.1
Hebraud, M.2
Talon, R.3
Henderson, I.R.4
-
26
-
-
68749097113
-
Outer membrane translocation: numerical protein secretion nomenclature in question in mycobacteria
-
Desvaux M., Hebraud M., Talon R., Henderson I.R. Outer membrane translocation: numerical protein secretion nomenclature in question in mycobacteria. Trends Microbiol 2009, 17:338-340.
-
(2009)
Trends Microbiol
, vol.17
, pp. 338-340
-
-
Desvaux, M.1
Hebraud, M.2
Talon, R.3
Henderson, I.R.4
-
27
-
-
84870600503
-
Exoproteomics: exploring the world around biological systems
-
Armengaud J., Christie-Oleza J.A., Clair G., Malard V., Duport C. Exoproteomics: exploring the world around biological systems. Expert Rev Proteomics 2012, 9:561-575.
-
(2012)
Expert Rev Proteomics
, vol.9
, pp. 561-575
-
-
Armengaud, J.1
Christie-Oleza, J.A.2
Clair, G.3
Malard, V.4
Duport, C.5
-
28
-
-
84888813652
-
Proteinaceous determinants of surface colonization in bacteria: bacterial adhesion and biofilm formation from a protein secretion perspective
-
Chagnot C., Zorgani M.A., Astruc T., Desvaux M. Proteinaceous determinants of surface colonization in bacteria: bacterial adhesion and biofilm formation from a protein secretion perspective. Front Microbiol 2013, 4:303.
-
(2013)
Front Microbiol
, vol.4
, pp. 303
-
-
Chagnot, C.1
Zorgani, M.A.2
Astruc, T.3
Desvaux, M.4
-
29
-
-
33846611391
-
Feature-based reappraisal of the Bacillus subtilis exoproteome
-
Tjalsma H. Feature-based reappraisal of the Bacillus subtilis exoproteome. Proteomics 2007, 7:73-81.
-
(2007)
Proteomics
, vol.7
, pp. 73-81
-
-
Tjalsma, H.1
-
30
-
-
77956419405
-
The cancer cell secretome: a good source for discovering biomarkers?
-
Pavlou M.P., Diamandis E.P. The cancer cell secretome: a good source for discovering biomarkers?. J Proteomics 1896-1906, 2010:73.
-
(1896)
J Proteomics
, vol.2010
, pp. 73
-
-
Pavlou, M.P.1
Diamandis, E.P.2
-
31
-
-
51649116693
-
Tissue culture-based breast cancer biomarker discovery platform
-
Kulasingam V., Diamandis E.P. Tissue culture-based breast cancer biomarker discovery platform. Int J Cancer 2008, 123:2007-2012.
-
(2008)
Int J Cancer
, vol.123
, pp. 2007-2012
-
-
Kulasingam, V.1
Diamandis, E.P.2
-
32
-
-
77950641486
-
Workflow comparison for label-free, quantitative secretome proteomics for cancer biomarker discovery: method evaluation, differential analysis, and verification in serum
-
Piersma S.R., Fiedler U., Span S., Lingnau A., et al. Workflow comparison for label-free, quantitative secretome proteomics for cancer biomarker discovery: method evaluation, differential analysis, and verification in serum. J Proteome Res 1913-1922, 2010:9.
-
(1913)
J Proteome Res
, vol.2010
, pp. 9
-
-
Piersma, S.R.1
Fiedler, U.2
Span, S.3
Lingnau, A.4
-
33
-
-
48949104445
-
High-throughput and targeted in-depth mass spectrometry-based approaches for biofluid profiling and biomarker discovery
-
Jimenez C.R., Piersma S., Pham T.V. High-throughput and targeted in-depth mass spectrometry-based approaches for biofluid profiling and biomarker discovery. Biomark Med 2007, 1:541-565.
-
(2007)
Biomark Med
, vol.1
, pp. 541-565
-
-
Jimenez, C.R.1
Piersma, S.2
Pham, T.V.3
-
34
-
-
84884813444
-
The cancer secretome, current status and opportunities in the lung, breast and colorectal cancer context
-
Schaaij-Visser T.B., de Wit M., Lam S.W., Jimenez C.R. The cancer secretome, current status and opportunities in the lung, breast and colorectal cancer context. Biochim Biophys Acta 1834, 2013:2242-2258.
-
(1834)
Biochim Biophys Acta
, vol.2013
, pp. 2242-2258
-
-
Schaaij-Visser, T.B.1
de Wit, M.2
Lam, S.W.3
Jimenez, C.R.4
-
35
-
-
38949132540
-
Identification of collapsin response mediator protein-2 as a potential marker of colorectal carcinoma by comparative analysis of cancer cell secretomes
-
Wu C.C., Chen H.C., Chen S.J., Liu H.P., et al. Identification of collapsin response mediator protein-2 as a potential marker of colorectal carcinoma by comparative analysis of cancer cell secretomes. Proteomics 2008, 8:316-332.
-
(2008)
Proteomics
, vol.8
, pp. 316-332
-
-
Wu, C.C.1
Chen, H.C.2
Chen, S.J.3
Liu, H.P.4
-
36
-
-
73649116726
-
Identification of serum biomarkers for colorectal cancer metastasis using a differential secretome approach
-
Xue H., Lu B., Zhang J., Wu M., et al. Identification of serum biomarkers for colorectal cancer metastasis using a differential secretome approach. J Proteome Res 2009, 9:545-555.
-
(2009)
J Proteome Res
, vol.9
, pp. 545-555
-
-
Xue, H.1
Lu, B.2
Zhang, J.3
Wu, M.4
-
37
-
-
77952909304
-
Candidate serological biomarkers for cancer identified from the secretomes of 23 cancer cell lines and the human protein atlas
-
Wu C.C., Hsu C.W., Chen C.D., Yu C.J., et al. Candidate serological biomarkers for cancer identified from the secretomes of 23 cancer cell lines and the human protein atlas. Mol Cell Proteomics 2010, 9:1100-1117.
-
(2010)
Mol Cell Proteomics
, vol.9
, pp. 1100-1117
-
-
Wu, C.C.1
Hsu, C.W.2
Chen, C.D.3
Yu, C.J.4
-
38
-
-
84878724168
-
In-depth characterization of the secretome of colorectal cancer metastatic cells identifies key proteins in cell adhesion, migration, and invasion
-
Barderas R., Mendes M., Torres S., Bartolome R.A., et al. In-depth characterization of the secretome of colorectal cancer metastatic cells identifies key proteins in cell adhesion, migration, and invasion. Mol Cell Proteomics 2013, 12:1602-1620.
-
(2013)
Mol Cell Proteomics
, vol.12
, pp. 1602-1620
-
-
Barderas, R.1
Mendes, M.2
Torres, S.3
Bartolome, R.A.4
-
39
-
-
84880124478
-
Quantitative secretome analysis reveals the interactions between epithelia and tumor cells by in vitro modulating colon cancer microenvironment
-
Zeng X., Yang P., Chen B., Jin X., et al. Quantitative secretome analysis reveals the interactions between epithelia and tumor cells by in vitro modulating colon cancer microenvironment. J Proteomics 2013, 89:51-70.
-
(2013)
J Proteomics
, vol.89
, pp. 51-70
-
-
Zeng, X.1
Yang, P.2
Chen, B.3
Jin, X.4
-
40
-
-
84881485624
-
The secretome of colon cancer stem cells contains drug-metabolizing enzymes
-
Emmink B.L., Verheem A., Van Houdt W.J., Steller E.J., et al. The secretome of colon cancer stem cells contains drug-metabolizing enzymes. J Proteomics 2013, 91:84-96.
-
(2013)
J Proteomics
, vol.91
, pp. 84-96
-
-
Emmink, B.L.1
Verheem, A.2
Van Houdt, W.J.3
Steller, E.J.4
-
41
-
-
83055168538
-
Comparative proteomics of colon cancer stem cells and differentiated tumor cells identifies BIRC6 as a potential therapeutic target
-
[M111 011353]
-
Van Houdt W.J., Emmink B.L., Pham T.V., Piersma S.R., et al. Comparative proteomics of colon cancer stem cells and differentiated tumor cells identifies BIRC6 as a potential therapeutic target. Mol Cell Proteomics 2011, 10. [M111 011353].
-
(2011)
Mol Cell Proteomics
, vol.10
-
-
Van Houdt, W.J.1
Emmink, B.L.2
Pham, T.V.3
Piersma, S.R.4
-
42
-
-
33847630405
-
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
-
Elias J.E., Gygi S.P. Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat Methods 2007, 4:207-214.
-
(2007)
Nat Methods
, vol.4
, pp. 207-214
-
-
Elias, J.E.1
Gygi, S.P.2
-
43
-
-
38649090064
-
False discovery rates and related statistical concepts in mass spectrometry-based proteomics
-
Choi H., Nesvizhskii A.I. False discovery rates and related statistical concepts in mass spectrometry-based proteomics. J Proteome Res 2008, 7:47-50.
-
(2008)
J Proteome Res
, vol.7
, pp. 47-50
-
-
Choi, H.1
Nesvizhskii, A.I.2
-
44
-
-
74049115774
-
Mass spectrometry-based label-free quantitative proteomics
-
Zhu W., Smith J.W., Huang C.M. Mass spectrometry-based label-free quantitative proteomics. J Biomed Biotechnol 2010, 840518.
-
(2010)
J Biomed Biotechnol
, pp. 840518
-
-
Zhu, W.1
Smith, J.W.2
Huang, C.M.3
-
45
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
Liu H., Sadygov R.G., Yates J.R. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal Chem 2004, 76:4193-4201.
-
(2004)
Anal Chem
, vol.76
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates, J.R.3
-
46
-
-
48849097164
-
Quantitative proteomics as a new piece of the systems biology puzzle
-
Bachi A., Bonaldi T. Quantitative proteomics as a new piece of the systems biology puzzle. J Proteomics 2008, 71:357-367.
-
(2008)
J Proteomics
, vol.71
, pp. 357-367
-
-
Bachi, A.1
Bonaldi, T.2
-
47
-
-
80054014368
-
Comparison of stable-isotope labeling with amino acids in cell culture and spectral counting for relative quantification of protein expression
-
Collier T.S., Randall S.M., Sarkar P., Rao B.M., et al. Comparison of stable-isotope labeling with amino acids in cell culture and spectral counting for relative quantification of protein expression. Rapid Commun Mass Spectrom 2011, 25:2524-2532.
-
(2011)
Rapid Commun Mass Spectrom
, vol.25
, pp. 2524-2532
-
-
Collier, T.S.1
Randall, S.M.2
Sarkar, P.3
Rao, B.M.4
-
48
-
-
3042521098
-
Improved prediction of signal peptides: SignalP 3.0
-
Bendtsen J.D., Nielsen H., von Heijne G., Brunak S. Improved prediction of signal peptides: SignalP 3.0. J Mol Biol 2004, 340:783-795.
-
(2004)
J Mol Biol
, vol.340
, pp. 783-795
-
-
Bendtsen, J.D.1
Nielsen, H.2
von Heijne, G.3
Brunak, S.4
-
49
-
-
0030614959
-
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
-
Nielsen H., Engelbrecht J., Brunak S., von Heijne G. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng 1997, 10:1-6.
-
(1997)
Protein Eng
, vol.10
, pp. 1-6
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
von Heijne, G.4
-
50
-
-
3042692704
-
Feature-based prediction of non-classical and leaderless protein secretion
-
Bendtsen J.D., Jensen L.J., Blom N., Von Heijne G., Brunak S. Feature-based prediction of non-classical and leaderless protein secretion. Protein Eng Des Sel 2004, 17:349-356.
-
(2004)
Protein Eng Des Sel
, vol.17
, pp. 349-356
-
-
Bendtsen, J.D.1
Jensen, L.J.2
Blom, N.3
Von Heijne, G.4
Brunak, S.5
-
51
-
-
0034899781
-
Evaluation of methods for the prediction of membrane spanning regions
-
Moller S., Croning M.D., Apweiler R. Evaluation of methods for the prediction of membrane spanning regions. Bioinformatics 2001, 17:646-653.
-
(2001)
Bioinformatics
, vol.17
, pp. 646-653
-
-
Moller, S.1
Croning, M.D.2
Apweiler, R.3
-
52
-
-
84880723873
-
Enrichment map profiling of the cancer invasion front suggests regulation of colorectal cancer progression by the bone morphogenetic protein antagonist, gremlin-1
-
Karagiannis G.S., Berk A., Dimitromanolakis A., Diamandis E.P. Enrichment map profiling of the cancer invasion front suggests regulation of colorectal cancer progression by the bone morphogenetic protein antagonist, gremlin-1. Mol Oncol 2013, 7:826-839.
-
(2013)
Mol Oncol
, vol.7
, pp. 826-839
-
-
Karagiannis, G.S.1
Berk, A.2
Dimitromanolakis, A.3
Diamandis, E.P.4
-
53
-
-
24044440971
-
BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks
-
Maere S., Heymans K., Kuiper M. BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks. Bioinformatics 2005, 21:3448-3449.
-
(2005)
Bioinformatics
, vol.21
, pp. 3448-3449
-
-
Maere, S.1
Heymans, K.2
Kuiper, M.3
-
54
-
-
78649775562
-
Enrichment map: a network-based method for gene-set enrichment visualization and interpretation
-
Merico D., Isserlin R., Stueker O., Emili A., Bader G.D. Enrichment map: a network-based method for gene-set enrichment visualization and interpretation. PLoS One 2010, 5:e13984.
-
(2010)
PLoS One
, vol.5
-
-
Merico, D.1
Isserlin, R.2
Stueker, O.3
Emili, A.4
Bader, G.D.5
-
55
-
-
80054761009
-
Visualizing gene-set enrichment results using the Cytoscape plug-in enrichment map
-
Merico D., Isserlin R., Bader G.D. Visualizing gene-set enrichment results using the Cytoscape plug-in enrichment map. Methods Mol Biol 2011, 781:257-277.
-
(2011)
Methods Mol Biol
, vol.781
, pp. 257-277
-
-
Merico, D.1
Isserlin, R.2
Bader, G.D.3
-
56
-
-
84876515907
-
STRING v9.1: protein-protein interaction networks, with increased coverage and integration
-
Franceschini A., Szklarczyk D., Frankild S., Kuhn M., et al. STRING v9.1: protein-protein interaction networks, with increased coverage and integration. Nucleic Acids Res 2012, 41:D808-D815.
-
(2012)
Nucleic Acids Res
, vol.41
-
-
Franceschini, A.1
Szklarczyk, D.2
Frankild, S.3
Kuhn, M.4
-
57
-
-
0036081355
-
Gene expression omnibus: NCBI gene expression and hybridization array data repository
-
Edgar R., Domrachev M., Lash A.E. Gene expression omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 2002, 30:207-210.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 207-210
-
-
Edgar, R.1
Domrachev, M.2
Lash, A.E.3
-
58
-
-
58149204055
-
ArrayExpress update-from an archive of functional genomics experiments to the atlas of gene expression
-
Parkinson H., Kapushesky M., Kolesnikov N., Rustici G., et al. ArrayExpress update-from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res 2009, 37:D868-D872.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Parkinson, H.1
Kapushesky, M.2
Kolesnikov, N.3
Rustici, G.4
-
59
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
Irizarry R.A., Hobbs B., Collin F., Beazer-Barclay Y.D., et al. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 2003, 4:249-264.
-
(2003)
Biostatistics
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
-
60
-
-
77950644737
-
A global map of human gene expression
-
Lukk M., Kapushesky M., Nikkila J., Parkinson H., et al. A global map of human gene expression. Nat Biotechnol 2010, 28:322-324.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 322-324
-
-
Lukk, M.1
Kapushesky, M.2
Nikkila, J.3
Parkinson, H.4
-
61
-
-
33747456031
-
Characterization of human kallikreins 6 and 10 in ascites fluid from ovarian cancer patients
-
Luo L.Y., Soosaipillai A., Grass L., Diamandis E.P. Characterization of human kallikreins 6 and 10 in ascites fluid from ovarian cancer patients. Tumour Biol 2006, 27:227-234.
-
(2006)
Tumour Biol
, vol.27
, pp. 227-234
-
-
Luo, L.Y.1
Soosaipillai, A.2
Grass, L.3
Diamandis, E.P.4
-
62
-
-
34547634419
-
Distribution of 15 human kallikreins in tissues and biological fluids
-
Shaw J.L., Diamandis E.P. Distribution of 15 human kallikreins in tissues and biological fluids. Clin Chem 2007, 53:1423-1432.
-
(2007)
Clin Chem
, vol.53
, pp. 1423-1432
-
-
Shaw, J.L.1
Diamandis, E.P.2
-
63
-
-
84856975609
-
Evaluation and prognostic significance of human tissue kallikrein-related peptidase 6 (KLK6) in colorectal cancer
-
Petraki C., Dubinski W., Scorilas A., Saleh C., et al. Evaluation and prognostic significance of human tissue kallikrein-related peptidase 6 (KLK6) in colorectal cancer. Pathol Res Pract 2012, 208:104-108.
-
(2012)
Pathol Res Pract
, vol.208
, pp. 104-108
-
-
Petraki, C.1
Dubinski, W.2
Scorilas, A.3
Saleh, C.4
-
64
-
-
0036733703
-
Human kallikrein 10 expression in normal tissues by immunohistochemistry
-
Petraki C.D., Karavana V.N., Luo L.Y., Diamandis E.P. Human kallikrein 10 expression in normal tissues by immunohistochemistry. J Histochem Cytochem 2002, 50:1247-1261.
-
(2002)
J Histochem Cytochem
, vol.50
, pp. 1247-1261
-
-
Petraki, C.D.1
Karavana, V.N.2
Luo, L.Y.3
Diamandis, E.P.4
-
65
-
-
55249103819
-
Co-expression of KLK6 and KLK10 as prognostic factors for survival in pancreatic ductal adenocarcinoma
-
Ruckert F., Hennig M., Petraki C.D., Wehrum D., et al. Co-expression of KLK6 and KLK10 as prognostic factors for survival in pancreatic ductal adenocarcinoma. Br J Cancer 2008, 99:1484-1492.
-
(2008)
Br J Cancer
, vol.99
, pp. 1484-1492
-
-
Ruckert, F.1
Hennig, M.2
Petraki, C.D.3
Wehrum, D.4
-
66
-
-
85027950739
-
Evaluation and prognostic significance of human tissue kallikrein-related peptidase 10 (KLK10) in colorectal cancer
-
Petraki C., Youssef Y.M., Dubinski W., Lichner Z., et al. Evaluation and prognostic significance of human tissue kallikrein-related peptidase 10 (KLK10) in colorectal cancer. Tumour Biol 2012, 33:1209-1214.
-
(2012)
Tumour Biol
, vol.33
, pp. 1209-1214
-
-
Petraki, C.1
Youssef, Y.M.2
Dubinski, W.3
Lichner, Z.4
-
67
-
-
80054044048
-
Integrated proteomic profiling of cell line conditioned media and pancreatic juice for the identification of pancreatic cancer biomarkers
-
[M111 008599]
-
Makawita S., Smith C., Batruch I., Zheng Y., et al. Integrated proteomic profiling of cell line conditioned media and pancreatic juice for the identification of pancreatic cancer biomarkers. Mol Cell Proteomics 2011, 10. [M111 008599].
-
(2011)
Mol Cell Proteomics
, vol.10
-
-
Makawita, S.1
Smith, C.2
Batruch, I.3
Zheng, Y.4
-
68
-
-
53049099609
-
Proteomic analysis of conditioned media from the PC3, LNCaP, and 22Rv1 prostate cancer cell lines: discovery and validation of candidate prostate cancer biomarkers
-
Sardana G., Jung K., Stephan C., Diamandis E.P. Proteomic analysis of conditioned media from the PC3, LNCaP, and 22Rv1 prostate cancer cell lines: discovery and validation of candidate prostate cancer biomarkers. J Proteome Res 2008, 7:3329-3338.
-
(2008)
J Proteome Res
, vol.7
, pp. 3329-3338
-
-
Sardana, G.1
Jung, K.2
Stephan, C.3
Diamandis, E.P.4
-
69
-
-
70349974679
-
Comprehensive analysis of conditioned media from ovarian cancer cell lines identifies novel candidate markers of epithelial ovarian cancer
-
Gunawardana C.G., Kuk C., Smith C.R., Batruch I., et al. Comprehensive analysis of conditioned media from ovarian cancer cell lines identifies novel candidate markers of epithelial ovarian cancer. J Proteome Res 2009, 8:4705-4713.
-
(2009)
J Proteome Res
, vol.8
, pp. 4705-4713
-
-
Gunawardana, C.G.1
Kuk, C.2
Smith, C.R.3
Batruch, I.4
-
70
-
-
36749068866
-
Proteomics analysis of conditioned media from three breast cancer cell lines: a mine for biomarkers and therapeutic targets
-
Kulasingam V., Diamandis E.P. Proteomics analysis of conditioned media from three breast cancer cell lines: a mine for biomarkers and therapeutic targets. Mol Cell Proteomics 1997-2011, 2007:6.
-
(1997)
Mol Cell Proteomics
, vol.2007
, pp. 6
-
-
Kulasingam, V.1
Diamandis, E.P.2
-
71
-
-
75149133225
-
Identification of five candidate lung cancer biomarkers by proteomics analysis of conditioned media of four lung cancer cell lines
-
Planque C., Kulasingam V., Smith C.R., Reckamp K., et al. Identification of five candidate lung cancer biomarkers by proteomics analysis of conditioned media of four lung cancer cell lines. Mol Cell Proteomics 2009, 8:2746-2758.
-
(2009)
Mol Cell Proteomics
, vol.8
, pp. 2746-2758
-
-
Planque, C.1
Kulasingam, V.2
Smith, C.R.3
Reckamp, K.4
-
72
-
-
84867257723
-
Proteomic profiling of androgen-independent prostate cancer cell lines reveals a role for protein S during the development of high grade and castration-resistant prostate cancer
-
Saraon P., Musrap N., Cretu D., Karagiannis G.S., et al. Proteomic profiling of androgen-independent prostate cancer cell lines reveals a role for protein S during the development of high grade and castration-resistant prostate cancer. J Biol Chem 2012, 287:34019-34031.
-
(2012)
J Biol Chem
, vol.287
, pp. 34019-34031
-
-
Saraon, P.1
Musrap, N.2
Cretu, D.3
Karagiannis, G.S.4
-
73
-
-
84875883379
-
Coupling proteomics and transcriptomics in the quest of subtype-specific proteins in breast cancer
-
Pavlou M.P., Dimitromanolakis A., Diamandis E.P. Coupling proteomics and transcriptomics in the quest of subtype-specific proteins in breast cancer. Proteomics 2013, 13:1083-1095.
-
(2013)
Proteomics
, vol.13
, pp. 1083-1095
-
-
Pavlou, M.P.1
Dimitromanolakis, A.2
Diamandis, E.P.3
-
74
-
-
84863932570
-
Proteomic signatures of the desmoplastic invasion front reveal collagen type XII as a marker of myofibroblastic differentiation during colorectal cancer metastasis
-
Karagiannis G.S., Petraki C., Prassas I., Saraon P., et al. Proteomic signatures of the desmoplastic invasion front reveal collagen type XII as a marker of myofibroblastic differentiation during colorectal cancer metastasis. Oncotarget 2012, 3:267-285.
-
(2012)
Oncotarget
, vol.3
, pp. 267-285
-
-
Karagiannis, G.S.1
Petraki, C.2
Prassas, I.3
Saraon, P.4
-
75
-
-
8144222388
-
The emerging roles of human tissue kallikreins in cancer
-
Borgono C.A., Diamandis E.P. The emerging roles of human tissue kallikreins in cancer. Nat Rev Cancer 2004, 4:876-890.
-
(2004)
Nat Rev Cancer
, vol.4
, pp. 876-890
-
-
Borgono, C.A.1
Diamandis, E.P.2
-
76
-
-
3543150203
-
Human tissue kallikreins: physiologic roles and applications in cancer
-
Borgono C.A., Michael I.P., Diamandis E.P. Human tissue kallikreins: physiologic roles and applications in cancer. Mol Cancer Res 2004, 2:257-280.
-
(2004)
Mol Cancer Res
, vol.2
, pp. 257-280
-
-
Borgono, C.A.1
Michael, I.P.2
Diamandis, E.P.3
-
77
-
-
84872175226
-
Integrative pathway dissection of molecular mechanisms of moxLDL-induced vascular smooth muscle phenotype transformation
-
Karagiannis G.S., Weile J., Bader G.D., Minta J. Integrative pathway dissection of molecular mechanisms of moxLDL-induced vascular smooth muscle phenotype transformation. BMC Cardiovasc Disord 2013, 13:4.
-
(2013)
BMC Cardiovasc Disord
, vol.13
, pp. 4
-
-
Karagiannis, G.S.1
Weile, J.2
Bader, G.D.3
Minta, J.4
-
78
-
-
79952284127
-
Hallmarks of cancer: the next generation
-
Hanahan D., Weinberg R.A. Hallmarks of cancer: the next generation. Cell 2011, 144:646-674.
-
(2011)
Cell
, vol.144
, pp. 646-674
-
-
Hanahan, D.1
Weinberg, R.A.2
-
79
-
-
84869225491
-
Cancer-associated fibroblasts drive the progression of metastasis through both paracrine and mechanical pressure on cancer tissue
-
Karagiannis G.S., Poutahidis T., Erdman S.E., Kirsch R., et al. Cancer-associated fibroblasts drive the progression of metastasis through both paracrine and mechanical pressure on cancer tissue. Mol Cancer Res 2012, 10:1403-1418.
-
(2012)
Mol Cancer Res
, vol.10
, pp. 1403-1418
-
-
Karagiannis, G.S.1
Poutahidis, T.2
Erdman, S.E.3
Kirsch, R.4
-
80
-
-
55049133250
-
Metadegradomics: toward in vivo quantitative degradomics of proteolytic post-translational modifications of the cancer proteome
-
Doucet A., Butler G.S., Rodriguez D., Prudova A., Overall C.M. Metadegradomics: toward in vivo quantitative degradomics of proteolytic post-translational modifications of the cancer proteome. Mol Cell Proteomics 2008, 7:1925-1951.
-
(2008)
Mol Cell Proteomics
, vol.7
, pp. 1925-1951
-
-
Doucet, A.1
Butler, G.S.2
Rodriguez, D.3
Prudova, A.4
Overall, C.M.5
-
81
-
-
52949151513
-
Protease proteomics: revealing protease in vivo functions using systems biology approaches
-
Doucet A., Overall C.M. Protease proteomics: revealing protease in vivo functions using systems biology approaches. Mol Aspects Med 2008, 29:339-358.
-
(2008)
Mol Aspects Med
, vol.29
, pp. 339-358
-
-
Doucet, A.1
Overall, C.M.2
-
82
-
-
0015226276
-
Specificity of the carcinoembryonic antigen (CEA)
-
Collins J.J., Black P.H. Specificity of the carcinoembryonic antigen (CEA). N Engl J Med 1971, 285:175-176.
-
(1971)
N Engl J Med
, vol.285
, pp. 175-176
-
-
Collins, J.J.1
Black, P.H.2
-
83
-
-
84861786167
-
Divergent roles of CD44 and carcinoembryonic antigen in colon cancer metastasis
-
Dallas M.R., Liu G., Chen W.C., Thomas S.N., et al. Divergent roles of CD44 and carcinoembryonic antigen in colon cancer metastasis. FASEB J 2012, 26:2648-2656.
-
(2012)
FASEB J
, vol.26
, pp. 2648-2656
-
-
Dallas, M.R.1
Liu, G.2
Chen, W.C.3
Thomas, S.N.4
-
84
-
-
47049127247
-
Carcinoembryonic antigen and CD44 variant isoforms cooperate to mediate colon carcinoma cell adhesion to E- and L-selectin in shear flow
-
Thomas S.N., Zhu F., Schnaar R.L., Alves C.S., Konstantopoulos K. Carcinoembryonic antigen and CD44 variant isoforms cooperate to mediate colon carcinoma cell adhesion to E- and L-selectin in shear flow. J Biol Chem 2008, 283:15647-15655.
-
(2008)
J Biol Chem
, vol.283
, pp. 15647-15655
-
-
Thomas, S.N.1
Zhu, F.2
Schnaar, R.L.3
Alves, C.S.4
Konstantopoulos, K.5
-
85
-
-
21044435933
-
Expression of von Hippel-Lindau tumor suppressor and tumor-associated carbonic anhydrases IX and XII in normal and neoplastic colorectal mucosa
-
Kivela A.J., Parkkila S., Saarnio J., Karttunen T.J., et al. Expression of von Hippel-Lindau tumor suppressor and tumor-associated carbonic anhydrases IX and XII in normal and neoplastic colorectal mucosa. World J Gastroenterol 2005, 11:2616-2625.
-
(2005)
World J Gastroenterol
, vol.11
, pp. 2616-2625
-
-
Kivela, A.J.1
Parkkila, S.2
Saarnio, J.3
Karttunen, T.J.4
-
86
-
-
50249122264
-
Poorer outcome in stromal HIF-2 alpha- and CA9-positive colorectal adenocarcinomas is associated with wild-type TP53 but not with BNIP3 promoter hypermethylation or apoptosis
-
Cleven A.H., Wouters B.G., Schutte B., Spiertz A.J., et al. Poorer outcome in stromal HIF-2 alpha- and CA9-positive colorectal adenocarcinomas is associated with wild-type TP53 but not with BNIP3 promoter hypermethylation or apoptosis. Br J Cancer 2008, 99:727-733.
-
(2008)
Br J Cancer
, vol.99
, pp. 727-733
-
-
Cleven, A.H.1
Wouters, B.G.2
Schutte, B.3
Spiertz, A.J.4
-
87
-
-
77449140110
-
Cyclooxygenase-2/carbonic anhydrase-IX up-regulation promotes invasive potential and hypoxia survival in colorectal cancer cells
-
Sansone P., Piazzi G., Paterini P., Strillacci A., et al. Cyclooxygenase-2/carbonic anhydrase-IX up-regulation promotes invasive potential and hypoxia survival in colorectal cancer cells. J Cell Mol Med 2009, 13:3876-3887.
-
(2009)
J Cell Mol Med
, vol.13
, pp. 3876-3887
-
-
Sansone, P.1
Piazzi, G.2
Paterini, P.3
Strillacci, A.4
-
88
-
-
77952554010
-
Carbonic anhydrase IX expression in prostate cancer
-
Smyth L.G., O'Hurley G., O'Grady A., Fitzpatrick J.M., et al. Carbonic anhydrase IX expression in prostate cancer. Prostate Cancer Prostatic Dis 2009, 13:178-181.
-
(2009)
Prostate Cancer Prostatic Dis
, vol.13
, pp. 178-181
-
-
Smyth, L.G.1
O'Hurley, G.2
O'Grady, A.3
Fitzpatrick, J.M.4
-
89
-
-
33846661209
-
Olfactomedin 4 promotes S-phase transition in proliferation of pancreatic cancer cells
-
Kobayashi D., Koshida S., Moriai R., Tsuji N., Watanabe N. Olfactomedin 4 promotes S-phase transition in proliferation of pancreatic cancer cells. Cancer Sci 2007, 98:334-340.
-
(2007)
Cancer Sci
, vol.98
, pp. 334-340
-
-
Kobayashi, D.1
Koshida, S.2
Moriai, R.3
Tsuji, N.4
Watanabe, N.5
-
90
-
-
34249063566
-
Lysyl oxidase-like 2 expression is increased in colon and esophageal tumors and associated with less differentiated colon tumors
-
Fong S.F., Dietzsch E., Fong K.S., Hollosi P., et al. Lysyl oxidase-like 2 expression is increased in colon and esophageal tumors and associated with less differentiated colon tumors. Genes Chromosomes Cancer 2007, 46:644-655.
-
(2007)
Genes Chromosomes Cancer
, vol.46
, pp. 644-655
-
-
Fong, S.F.1
Dietzsch, E.2
Fong, K.S.3
Hollosi, P.4
-
91
-
-
67449108314
-
Lysyl oxidase-like 2 promotes migration in noninvasive breast cancer cells but not in normal breast epithelial cells
-
Hollosi P., Yakushiji J.K., Fong K.S., Csiszar K., Fong S.F. Lysyl oxidase-like 2 promotes migration in noninvasive breast cancer cells but not in normal breast epithelial cells. Int J Cancer 2009, 125:318-327.
-
(2009)
Int J Cancer
, vol.125
, pp. 318-327
-
-
Hollosi, P.1
Yakushiji, J.K.2
Fong, K.S.3
Csiszar, K.4
Fong, S.F.5
-
92
-
-
29244463349
-
Switching on-off Snail: LOXL2 versus GSK3beta
-
Peinado H., Portillo F., Cano A. Switching on-off Snail: LOXL2 versus GSK3beta. Cell Cycle 2005, 4:1749-1752.
-
(2005)
Cell Cycle
, vol.4
, pp. 1749-1752
-
-
Peinado, H.1
Portillo, F.2
Cano, A.3
-
93
-
-
84864749532
-
Gremlin is overexpressed in lung adenocarcinoma and increases cell growth and proliferation in normal lung cells
-
Mulvihill M.S., Kwon Y.W., Lee S., Fang L.T., et al. Gremlin is overexpressed in lung adenocarcinoma and increases cell growth and proliferation in normal lung cells. PLoS One 2012, 7:e42264.
-
(2012)
PLoS One
, vol.7
-
-
Mulvihill, M.S.1
Kwon, Y.W.2
Lee, S.3
Fang, L.T.4
-
94
-
-
33749528535
-
Bone morphogenetic protein antagonist gremlin 1 is widely expressed by cancer-associated stromal cells and can promote tumor cell proliferation
-
Sneddon J.B., Zhen H.H., Montgomery K., van de Rijn M., et al. Bone morphogenetic protein antagonist gremlin 1 is widely expressed by cancer-associated stromal cells and can promote tumor cell proliferation. Proc Natl Acad Sci U S A 2006, 103:14842-14847.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 14842-14847
-
-
Sneddon, J.B.1
Zhen, H.H.2
Montgomery, K.3
van de Rijn, M.4
-
95
-
-
17444390881
-
Comparison of features of human breast cancer cell lines and their corresponding tumors
-
Wistuba I.I., Behrens C., Milchgrub S., Syed S., et al. Comparison of features of human breast cancer cell lines and their corresponding tumors. Clin Cancer Res 1998, 4:2931-2938.
-
(1998)
Clin Cancer Res
, vol.4
, pp. 2931-2938
-
-
Wistuba, I.I.1
Behrens, C.2
Milchgrub, S.3
Syed, S.4
-
96
-
-
0032900869
-
Comparison of features of human lung cancer cell lines and their corresponding tumors
-
Wistuba I.I., Bryant D., Behrens C., Milchgrub S., et al. Comparison of features of human lung cancer cell lines and their corresponding tumors. Clin Cancer Res 1999, 5:991-1000.
-
(1999)
Clin Cancer Res
, vol.5
, pp. 991-1000
-
-
Wistuba, I.I.1
Bryant, D.2
Behrens, C.3
Milchgrub, S.4
-
97
-
-
84878680914
-
Quantitative proteomics reveals that enzymes of the ketogenic pathway are associated with prostate cancer progression
-
Saraon P., Cretu D., Musrap N., Karagiannis G.S., et al. Quantitative proteomics reveals that enzymes of the ketogenic pathway are associated with prostate cancer progression. Mol Cell Proteomics 2013, 12:1589-1601.
-
(2013)
Mol Cell Proteomics
, vol.12
, pp. 1589-1601
-
-
Saraon, P.1
Cretu, D.2
Musrap, N.3
Karagiannis, G.S.4
-
98
-
-
84860315246
-
A framework for mapping, visualisation and automatic model creation of signal-transduction networks
-
Tiger C.F., Krause F., Cedersund G., Palmer R., et al. A framework for mapping, visualisation and automatic model creation of signal-transduction networks. Mol Syst Biol 2012, 8:578.
-
(2012)
Mol Syst Biol
, vol.8
, pp. 578
-
-
Tiger, C.F.1
Krause, F.2
Cedersund, G.3
Palmer, R.4
-
99
-
-
65249119617
-
Exploring clinical associations using '-omics' based enrichment analyses
-
Hanauer D.A., Rhodes D.R., Chinnaiyan A.M. Exploring clinical associations using '-omics' based enrichment analyses. PLoS One 2009, 4:e5203.
-
(2009)
PLoS One
, vol.4
-
-
Hanauer, D.A.1
Rhodes, D.R.2
Chinnaiyan, A.M.3
-
100
-
-
34249910312
-
Network analysis of protein dynamics
-
Bode C., Kovacs I.A., Szalay M.S., Palotai R., et al. Network analysis of protein dynamics. FEBS Lett 2007, 581:2776-2782.
-
(2007)
FEBS Lett
, vol.581
, pp. 2776-2782
-
-
Bode, C.1
Kovacs, I.A.2
Szalay, M.S.3
Palotai, R.4
-
101
-
-
48549092620
-
Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets
-
Chu L.H., Chen B.S. Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets. BMC Syst Biol 2008, 2:56.
-
(2008)
BMC Syst Biol
, vol.2
, pp. 56
-
-
Chu, L.H.1
Chen, B.S.2
-
102
-
-
52449111924
-
Systems biology of molecular chaperone networks
-
[discussion 54-48, 137-140]
-
Csermely P., Korcsmaros T., Kovacs I.A., Szalay M.S., Soti C. Systems biology of molecular chaperone networks. Novartis Found Symp 2008, 291:45-54. [discussion 54-48, 137-140].
-
(2008)
Novartis Found Symp
, vol.291
, pp. 45-54
-
-
Csermely, P.1
Korcsmaros, T.2
Kovacs, I.A.3
Szalay, M.S.4
Soti, C.5
-
103
-
-
33745712594
-
Why do hubs tend to be essential in protein networks?
-
He X., Zhang J. Why do hubs tend to be essential in protein networks?. PLoS Genet 2006, 2:e88.
-
(2006)
PLoS Genet
, vol.2
-
-
He, X.1
Zhang, J.2
-
104
-
-
56849091295
-
Network hubs buffer environmental variation in Saccharomyces cerevisiae
-
Levy S.F., Siegal M.L. Network hubs buffer environmental variation in Saccharomyces cerevisiae. PLoS Biol 2008, 6:e264.
-
(2008)
PLoS Biol
, vol.6
-
-
Levy, S.F.1
Siegal, M.L.2
-
105
-
-
69249154268
-
A network biology study on circadian rhythm by integrating various omics data
-
Wang Y., Zhang X.S., Chen L. A network biology study on circadian rhythm by integrating various omics data. OMICS 2009, 13:313-324.
-
(2009)
OMICS
, vol.13
, pp. 313-324
-
-
Wang, Y.1
Zhang, X.S.2
Chen, L.3
-
106
-
-
33745790302
-
Bone morphogenetic protein signaling and growth suppression in colon cancer
-
Beck S.E., Jung B.H., Fiorino A., Gomez J., et al. Bone morphogenetic protein signaling and growth suppression in colon cancer. Am J Physiol Gastrointest Liver Physiol 2006, 291:G135-G145.
-
(2006)
Am J Physiol Gastrointest Liver Physiol
, vol.291
-
-
Beck, S.E.1
Jung, B.H.2
Fiorino, A.3
Gomez, J.4
-
107
-
-
81055149905
-
Digitoxin-induced cytotoxicity in cancer cells is mediated through distinct kinase and interferon signaling networks
-
Prassas I., Karagiannis G.S., Batruch I., Dimitromanolakis A., et al. Digitoxin-induced cytotoxicity in cancer cells is mediated through distinct kinase and interferon signaling networks. Mol Cancer Ther 2011, 10:2083-2093.
-
(2011)
Mol Cancer Ther
, vol.10
, pp. 2083-2093
-
-
Prassas, I.1
Karagiannis, G.S.2
Batruch, I.3
Dimitromanolakis, A.4
-
108
-
-
0028158534
-
Isolation and characterization of the human genomic locus coding for the putative metastasis control gene nm23-H1
-
Dooley S., Seib T., Engel M., Theisinger B., et al. Isolation and characterization of the human genomic locus coding for the putative metastasis control gene nm23-H1. Hum Genet 1994, 93:63-66.
-
(1994)
Hum Genet
, vol.93
, pp. 63-66
-
-
Dooley, S.1
Seib, T.2
Engel, M.3
Theisinger, B.4
-
109
-
-
79959917001
-
The insulin-like growth factor binding proteins 3 and 7 are associated with colorectal cancer and liver metastasis
-
Georges R.B., Adwan H., Hamdi H., Hielscher T., et al. The insulin-like growth factor binding proteins 3 and 7 are associated with colorectal cancer and liver metastasis. Cancer Biol Ther 2011, 12:69-79.
-
(2011)
Cancer Biol Ther
, vol.12
, pp. 69-79
-
-
Georges, R.B.1
Adwan, H.2
Hamdi, H.3
Hielscher, T.4
-
110
-
-
34548241750
-
IGFBP7 plays a potential tumor suppressor role in colorectal carcinogenesis
-
Ruan W., Xu E., Xu F., Ma Y., et al. IGFBP7 plays a potential tumor suppressor role in colorectal carcinogenesis. Cancer Biol Ther 2007, 6:354-359.
-
(2007)
Cancer Biol Ther
, vol.6
, pp. 354-359
-
-
Ruan, W.1
Xu, E.2
Xu, F.3
Ma, Y.4
-
111
-
-
33846167174
-
IGFBP7 plays a potential tumor suppressor role against colorectal carcinogenesis with its expression associated with DNA hypomethylation of exon 1
-
Ruan W.J., Lin J., Xu E.P., Xu F.Y., et al. IGFBP7 plays a potential tumor suppressor role against colorectal carcinogenesis with its expression associated with DNA hypomethylation of exon 1. J Zhejiang Univ Sci B 2006, 7:929-932.
-
(2006)
J Zhejiang Univ Sci B
, vol.7
, pp. 929-932
-
-
Ruan, W.J.1
Lin, J.2
Xu, E.P.3
Xu, F.Y.4
-
112
-
-
39549085348
-
Elevated CAIX expression is associated with an increased risk of distant failure in early-stage cervical cancer
-
Kirkpatrick J.P., Rabbani Z.N., Bentley R.C., Hardee M.E., et al. Elevated CAIX expression is associated with an increased risk of distant failure in early-stage cervical cancer. Biomark Insights 2008, 3:45-55.
-
(2008)
Biomark Insights
, vol.3
, pp. 45-55
-
-
Kirkpatrick, J.P.1
Rabbani, Z.N.2
Bentley, R.C.3
Hardee, M.E.4
-
113
-
-
0024397823
-
Multiple domains of the large fibroblast proteoglycan, versican
-
Zimmermann D.R., Ruoslahti E. Multiple domains of the large fibroblast proteoglycan, versican. EMBO J 1989, 8:2975-2981.
-
(1989)
EMBO J
, vol.8
, pp. 2975-2981
-
-
Zimmermann, D.R.1
Ruoslahti, E.2
-
114
-
-
74549139060
-
Zinc-alpha2-glycoprotein in cachexia and obesity
-
Tisdale M.J. Zinc-alpha2-glycoprotein in cachexia and obesity. Curr Opin Support Palliat Care 2009, 3:288-293.
-
(2009)
Curr Opin Support Palliat Care
, vol.3
, pp. 288-293
-
-
Tisdale, M.J.1
-
115
-
-
50349095677
-
Zinc alpha 2-glycoprotein: a multidisciplinary protein
-
Hassan M.I., Waheed A., Yadav S., Singh T.P., Ahmad F. Zinc alpha 2-glycoprotein: a multidisciplinary protein. Mol Cancer Res 2008, 6:892-906.
-
(2008)
Mol Cancer Res
, vol.6
, pp. 892-906
-
-
Hassan, M.I.1
Waheed, A.2
Yadav, S.3
Singh, T.P.4
Ahmad, F.5
-
116
-
-
78649477258
-
Molecular networks implicated in speech-related disorders: FOXP2 regulates the SRPX2/uPAR complex
-
Roll P., Vernes S.C., Bruneau N., Cillario J., et al. Molecular networks implicated in speech-related disorders: FOXP2 regulates the SRPX2/uPAR complex. Hum Mol Genet 2010, 19:4848-4860.
-
(2010)
Hum Mol Genet
, vol.19
, pp. 4848-4860
-
-
Roll, P.1
Vernes, S.C.2
Bruneau, N.3
Cillario, J.4
-
117
-
-
58749111083
-
SRPX2 is overexpressed in gastric cancer and promotes cellular migration and adhesion
-
Tanaka K., Arao T., Maegawa M., Matsumoto K., et al. SRPX2 is overexpressed in gastric cancer and promotes cellular migration and adhesion. Int J Cancer 2009, 124:1072-1080.
-
(2009)
Int J Cancer
, vol.124
, pp. 1072-1080
-
-
Tanaka, K.1
Arao, T.2
Maegawa, M.3
Matsumoto, K.4
-
118
-
-
72749114558
-
Sushi repeat protein X-linked 2, a novel mediator of angiogenesis
-
Miljkovic-Licina M., Hammel P., Garrido-Urbani S., Bradfield P.F., et al. Sushi repeat protein X-linked 2, a novel mediator of angiogenesis. FASEB J 2009, 23:4105-4116.
-
(2009)
FASEB J
, vol.23
, pp. 4105-4116
-
-
Miljkovic-Licina, M.1
Hammel, P.2
Garrido-Urbani, S.3
Bradfield, P.F.4
-
119
-
-
84860168409
-
Olfactomedin-4 is a glycoprotein secreted into mucus in active IBD
-
Gersemann M., Becker S., Nuding S., Antoni L., et al. Olfactomedin-4 is a glycoprotein secreted into mucus in active IBD. J Crohns Colitis 2012, 6:425-434.
-
(2012)
J Crohns Colitis
, vol.6
, pp. 425-434
-
-
Gersemann, M.1
Becker, S.2
Nuding, S.3
Antoni, L.4
-
120
-
-
77954639610
-
Olfactomedin 4 down-regulates innate immunity against Helicobacter pylori infection
-
Liu W., Yan M., Liu Y., Wang R., et al. Olfactomedin 4 down-regulates innate immunity against Helicobacter pylori infection. Proc Natl Acad Sci U S A 2010, 107:11056-11061.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 11056-11061
-
-
Liu, W.1
Yan, M.2
Liu, Y.3
Wang, R.4
-
121
-
-
84883500763
-
Olfm4 deletion enhances defense against Staphylococcus aureus in chronic granulomatous disease
-
Liu W., Yan M., Sugui J.A., Li H., et al. Olfm4 deletion enhances defense against Staphylococcus aureus in chronic granulomatous disease. J Clin Invest 2013, 123:3751-3755.
-
(2013)
J Clin Invest
, vol.123
, pp. 3751-3755
-
-
Liu, W.1
Yan, M.2
Sugui, J.A.3
Li, H.4
-
122
-
-
79952202070
-
Stem cell marker olfactomedin 4: critical appraisal of its characteristics and role in tumorigenesis
-
Grover P.K., Hardingham J.E., Cummins A.G. Stem cell marker olfactomedin 4: critical appraisal of its characteristics and role in tumorigenesis. Cancer Metastasis Rev 2010, 29:761-775.
-
(2010)
Cancer Metastasis Rev
, vol.29
, pp. 761-775
-
-
Grover, P.K.1
Hardingham, J.E.2
Cummins, A.G.3
-
123
-
-
33846657603
-
Specific overexpression of OLFM4(GW112/HGC-1) mRNA in colon, breast and lung cancer tissues detected using quantitative analysis
-
Koshida S., Kobayashi D., Moriai R., Tsuji N., Watanabe N. Specific overexpression of OLFM4(GW112/HGC-1) mRNA in colon, breast and lung cancer tissues detected using quantitative analysis. Cancer Sci 2007, 98:315-320.
-
(2007)
Cancer Sci
, vol.98
, pp. 315-320
-
-
Koshida, S.1
Kobayashi, D.2
Moriai, R.3
Tsuji, N.4
Watanabe, N.5
-
124
-
-
84892412132
-
New molecular staging with G-factors (VEGF-C and Reg IV) by supplementing TNM classification in colorectal cancers
-
Sawada T., Yashiro M., Sentani K., Oue N., et al. New molecular staging with G-factors (VEGF-C and Reg IV) by supplementing TNM classification in colorectal cancers. Oncol Rep 2013, 30:2609-2616.
-
(2013)
Oncol Rep
, vol.30
, pp. 2609-2616
-
-
Sawada, T.1
Yashiro, M.2
Sentani, K.3
Oue, N.4
-
125
-
-
79961103406
-
Olfactomedin 4, a novel marker for the differentiation and progression of gastrointestinal cancers
-
Yu L., Wang L., Chen S. Olfactomedin 4, a novel marker for the differentiation and progression of gastrointestinal cancers. Neoplasma 2011, 58:9-13.
-
(2011)
Neoplasma
, vol.58
, pp. 9-13
-
-
Yu, L.1
Wang, L.2
Chen, S.3
-
126
-
-
83055168484
-
A quantitative proteomic approach of the different stages of colorectal cancer establishes OLFM4 as a new nonmetastatic tumor marker
-
[M111 009712]
-
Besson D., Pavageau A.H., Valo I., Bourreau A., et al. A quantitative proteomic approach of the different stages of colorectal cancer establishes OLFM4 as a new nonmetastatic tumor marker. Mol Cell Proteomics 2011, 10. [M111 009712].
-
(2011)
Mol Cell Proteomics
, vol.10
-
-
Besson, D.1
Pavageau, A.H.2
Valo, I.3
Bourreau, A.4
-
127
-
-
84857893767
-
Olfactomedin 4 defines a subset of human neutrophils
-
Clemmensen S.N., Bohr C.T., Rorvig S., Glenthoj A., et al. Olfactomedin 4 defines a subset of human neutrophils. J Leukoc Biol 2012, 91:495-500.
-
(2012)
J Leukoc Biol
, vol.91
, pp. 495-500
-
-
Clemmensen, S.N.1
Bohr, C.T.2
Rorvig, S.3
Glenthoj, A.4
-
128
-
-
70349880528
-
Serum olfactomedin 4 (GW112, hGC-1) in combination with Reg IV is a highly sensitive biomarker for gastric cancer patients
-
Oue N., Sentani K., Noguchi T., Ohara S., et al. Serum olfactomedin 4 (GW112, hGC-1) in combination with Reg IV is a highly sensitive biomarker for gastric cancer patients. Int J Cancer 2009, 125:2383-2392.
-
(2009)
Int J Cancer
, vol.125
, pp. 2383-2392
-
-
Oue, N.1
Sentani, K.2
Noguchi, T.3
Ohara, S.4
-
129
-
-
80054767272
-
OLFM4 is associated with lymph node metastasis and poor prognosis in patients with gastric cancer
-
Luo Z., Zhang Q., Zhao Z., Li B., et al. OLFM4 is associated with lymph node metastasis and poor prognosis in patients with gastric cancer. J Cancer Res Clin Oncol 2011, 137:1713-1720.
-
(2011)
J Cancer Res Clin Oncol
, vol.137
, pp. 1713-1720
-
-
Luo, Z.1
Zhang, Q.2
Zhao, Z.3
Li, B.4
-
130
-
-
79956085883
-
Olfactomedin 4 is a marker for progression of cervical neoplasia
-
Yu L., He M., Yang Z., Chen G., et al. Olfactomedin 4 is a marker for progression of cervical neoplasia. Int J Gynecol Cancer 2011, 21:367-372.
-
(2011)
Int J Gynecol Cancer
, vol.21
, pp. 367-372
-
-
Yu, L.1
He, M.2
Yang, Z.3
Chen, G.4
-
131
-
-
79955562722
-
Prognostic gene-expression signature of carcinoma-associated fibroblasts in non-small cell lung cancer
-
Navab R., Strumpf D., Bandarchi B., Zhu C.Q., et al. Prognostic gene-expression signature of carcinoma-associated fibroblasts in non-small cell lung cancer. Proc Natl Acad Sci U S A 2011, 108:7160-7165.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 7160-7165
-
-
Navab, R.1
Strumpf, D.2
Bandarchi, B.3
Zhu, C.Q.4
-
132
-
-
79960044517
-
Olfactomedin 4 suppresses prostate cancer cell growth and metastasis via negative interaction with cathepsin D and SDF-1
-
Chen L., Li H., Liu W., Zhu J., et al. Olfactomedin 4 suppresses prostate cancer cell growth and metastasis via negative interaction with cathepsin D and SDF-1. Carcinogenesis 2011, 32:986-994.
-
(2011)
Carcinogenesis
, vol.32
, pp. 986-994
-
-
Chen, L.1
Li, H.2
Liu, W.3
Zhu, J.4
-
133
-
-
85027955541
-
Olfactomedin 4 suppresses tumor growth and metastasis of mouse melanoma cells through downregulation of integrin and MMP genes
-
Park K.S., Kim K.K., Piao Z.H., Kim M.K., et al. Olfactomedin 4 suppresses tumor growth and metastasis of mouse melanoma cells through downregulation of integrin and MMP genes. Mol Cells 2012, 34:555-561.
-
(2012)
Mol Cells
, vol.34
, pp. 555-561
-
-
Park, K.S.1
Kim, K.K.2
Piao, Z.H.3
Kim, M.K.4
|