Molecular and biochemical responses to wounding in mesocarp of ripe peach (Prunus persica L. Batsch) fruit

Postharvest Biology and Technology

Volumn 90, Issue , 2014, Pages 40-51

  Tosetti, Roberta ^a   Tardelli, Francesca ^b   Tadiello, Alice ^c   Zaffalon, Valerio ^c   Giorgi, Federico M ^d   Guidi, Lucia ^b   Trainotti, Livio ^c   Bonghi, Claudio ^c   Tonutti, Pietro ^a  

^a SCUOLA SUPERIORE SANT ANNA   (Italy)

^b UNIVERSITY OF PISA   (Italy)

^c UNIVERSITY OF PADOVA   (Italy)

^d Columbia University ^*  (United States)

Author keywords

Mechanical stress; Microarray; Minimally processing; Postharvest physiology; Secondary metabolism; Transcription factors

Indexed keywords

EID: 84891350708     PISSN: 09255214     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.postharvbio.2013.12.001     Document Type: Article

References (76)

1. Akagi T., Ikegami A., Yonemori K. DkMyb2 wound-induced transcription factor of persimmon (Diospyros kaki Thunb.), contributes to proanthocyanidin regulation. Planta 2010, 232:1045-1059.
2. Apweiler R., Bairoch A., Wu C.H., Barker W.C., Boeckmann B., Ferro S., Gasteiger E., Huang H., Lopez R., Magrane M., Martin M.J., Natale D.A., O'Donovan C., Redaschi N., Yeh L.-L. UniProt: the universal protein knowledgebase. Nucl. Acids Res. 2004, 32:D115-D119.
3. Asahina M., Azuma K., Pitaksaringkarn W., Yamazaki T., Mitsuda N., Ohme-Takagi M., Yamaguchi S., Kamiya Y., Okada Y., Nishimura T., Koshiba T., Yokota T., Kamada H., Satoh S. Spatially selective hormonal control of RAP2.6L and ANAC071 transcription factors involved in tissue reunion in Arabidopsis. Proc. Natl. Acad. Sci. U. S. A. 2011, 108:16128-16132.
4. Ashburner M., Ball C.A., Blake J.A., Botstein D., Butler H., Cherry J.M., Davis A.P., Dolinski K., Dwight S.S., Eppig J.T., Harris M.A., Hill D.P., Issel-Tarver L., Kasarskis A., Lewis S., Matese J.C., Richardson J.E., Ringwald M., Rubin G.M., Sherlock G. Gene ontology: tool for the unification of biology. Nat. Genet. 2000, 25:25-29.
5. Bassi D., Monet R. Botany and taxonomy. The Peach: Botany, Production and Uses 2008, 1-36. CAB International, UK. D. Layne, D. Bassi (Eds.).
6. Basyuni M., Baba S., Kinjo Y., Putri L.A.P., Hakim L., Oku H. Salt-dependent increase in triterpenoids is reversible upon transfer to fresh water in mangrove plants Kandelia candel and Bruguiera gymnorrhiza. J. Plant Physiol. 2012, 169:1903-1908.
7. Begheldo M., Manganaris G.A., Bonghi C., Tonutti P. Different postharvest conditions modulate ripening and ethylene biosynthetic and signal transduction pathways in Stony Hard peaches. Postharvest Biol. Technol. 2008, 48:84-91.
8. Birkenmeier G.F., Ryan C.A. Wound signalling in tomato plants - evidence that ABA is not a primary signal for defense gene activation. Plant Physiol. 1998, 117:687-693.
9. Brecht J.K., Saltveit M.E., Talcott S.T., Schneider K.R., Felkey K., Bartz J.A. Fresh-cut vegetables and fruits. Hortic. Rev. 2004, 30:185-250.
10. Carbone K., Giannini B., Picchi V., Lo Scalzo R., Cecchini F. Phenolic composition and free radical scavenging activity of different apple varieties in relation to the cultivar, tissue type and storage. Food Chem. 2011, 127:493-500.
11. Chen J., He L., Jiang Y., Kuang J., Lu C., Joyce D., Macnish A., He Y., Lu W. Expression of PAL and HSPs in fresh-cut banana fruit. Environ. Exp. Bot. 2009, 66:31-37.
12. Chen L., Song Y., Li S., Zhang L., Zou C., Yu D. The role of WRKY transcription factors in plant abiotic stresses. Biochim. Biophys. Acta 2012, 1819:120-128.
13. Chen Y.Y., Wang L.F., Dai L.J., Yang S.G., Tian W.M. Characterization of HbEREBP1, a wound-responsive transcription factor gene in laticifers of Hevea brasiliensis Muell. Arg. Mol. Biol. Rep. 2012, 39:3713-3719.
14. Cheong Y.H., Chang H.S., Gupta R., Wang X., Zhou T., Luan S. Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis. Plant Physiol. 2002, 129:661-677.
15. Conesa A., Götz S. Blast2GO: a comprehensive suite for functional analysis in plant genomics. Int. J. Plant Genomics 2008, 2008:619832.
16. de Bruxelles G.L., Roberts M.R. Signals regulating multiple responses to wounding and herbivores. Crit. Rev. Plant Sci. 2001, 20:487-521.
17. Delessert C., Wilson I.W., Van Der Straeten D., Dennis E.S., Dolferus R. Spatial and temporal analysis of the local response to wounding in Arabidopsis leaves. Plant Mol. Biol. 2004, 55:165-181.
18. Dewanto V., Wu X.Z., Kafui K.A., Liu R.H. Thermal processing enhances the nutritional value of tomatoes by increasing total antioxidant activity. J. Agric. Food Chem. 2002, 50:3010-3014.
19. Du G., Li M., Ma F., Liang D. Antioxidant capacity and the relationship with polyphenol and Vitamin C in Actinidia fruits. Food Chem. 2009, 113:557-562.
20. Espin J.C., Morales M., Varon R., Tudela J., Garciacanovas F. A continuous spectrophotometric method for determining the monophenolase and diphenolase activities of apple polyphenol oxidase. Anal. Biochem. 1995, 231:237-246.
21. Espin J.C., Morales M., Garcia-Ruiz P.A., Tudela J., Garcia-Canovas F. Improvement of a continuous spectrophotometric method for determining the monophenolase and diphenolase activities of mushroom polyphenol oxidase. J. Agric. Food Chem. 1997, 45:1084-1090.
22. Ghiani A., Negrini N., Morgutti S., Baldin F., Nocito F.F., Spinardi A., Mignani I., Bassi D., Cocucci M. Melting of 'Big Top' nectarine fruit: some physiological, biochemical, and molecular aspects. J. Am. Soc. Hortic. Sci. 2011, 136:61-68.
23. Giorgi F.M., Del Fabbro C., Licausi F. Comparative study of RNAseq- and microarray-derived coexpression networks in Arabidopsis thaliana. Bioinformatics 2013, 29:717-724.
24. González-Buesa J., Arias E., Salvador M.L., Oria R., Ferrer-Mairal A. Suitability for minimal processing of non-melting clingstone peaches. Int. J. Food Sci. Technol. 2011, 46:819-826.
25. Han Y., Vimolmangkang S., Soria-Guerra R.E., Rosales-Mendoza S., Zheng D., Lygin A.V., Korban S.S. Ectopic expression of apple F3'H genes contributes to anthocyanin accumulation in the Arabidopsis tt7 mutant grown under nitrogen stress. Plant Physiol. 2010, 153:806-820.
26. Hara K., Yagi M., Kusano T., Sano S. Rapid systemic accumulation of transcripts encoding a tobacco WRKY transcription factor upon wounding. Mol. Genet. Genomics 2000, 263:30-37.
27. Hu Z.L., Bao J., Reecy J.M. CateGOrizer: a web-based program to batch analyze gene ontology classification categories. Online J. Bioinform. 2008, 9:108-112.
28. Illa E., Eduardo I., Audergon J.M., Barale F., Dirlewanger E., Li X., Moing A., Lambert P., Le Dantec L., Gao Z., Poëssel J.L., Pozzi C., Rossini L., Vecchietti A., Arús P., Howad W. Saturating the Prunus (stone fruits) genome with candidate genes for fruit quality. Mol. Breeding 2010, 28:667-682.
29. Kays S.J., Paull R.E. Stress in harvested products. Postharvest Biology 2004, 355-414. Exon Press, Athens. S.J. Kays, R.K. Paull (Eds.).
30. Koo A.J.K., Howea G.A. The wound hormone jasmonate. Phytochemistry 2009, 70:1571-1580.
31. Leide J., Hildebrandt U., Hartung W., Riederer M., Vogg G. Abscisic acid mediates the formation of a suberized stem scar tissue in tomato fruits. New Phytol. 2012, 194:402-415.
32. Licausi F., van Dongen J.T., Giuntoli B., Novi G., Santaniello A., Geigenberger P., Perata P. HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. Plant J. 2010, 62:302-315.
33. Loaiza-Velarde J.G., Tomás-Barberá F.A., Saltveit M.E. Effect of intensity and duration of heatshock treatments on wound-induced phenolic metabolism in Iceberg lettuce. J. Am. Soc. Hortic. Sci. 1997, 122:873-877.
34. Lohse M., Nunes-Nesi A., Krüger P., Nagel A., Hannemann J., Giorgi F.M., Childs L., Osorio S., Walther D., Selbig J., Sreenivasulu N., Stitt M., Fernie A.R., Usadel B. Robin: an intuitive wizard application for R-based expression microarray quality assessment and analysis. Plant Physiol. 2010, 153:642-651.
35. Manganaris G.A., Rasori A., Bassi D., Geuna F., Ramina A., Tonutti P., Bonghi C. Comparative transcript profiling of apricot (Prunus armeniaca L.) fruit development and on-tree ripening. Tree Genet. Genomes 2011, 7:609-616.
36. Martinez M.V., Whitaker J.R. The biochemistry and control of enzymatic browning. Trends Food Sci. Technol. 1995, 6:195-200.
37. Mitsuda N., Iwase A., Yamamoto H., Yoshida M., Seki M., Shinozaki K., Ohme-Takagia M. NAC transcription factors, NST1 and NST3, are key regulators of the formation of secondary walls in woody tissues of Arabidopsis. Plant Cell 2007, 19:270-280.
38. Mulas M., Lafuente M.T., Zacarias L. Lignin and gum deposition in wounded 'Oroval' clementines as affected by chilling and peel water content. Postharvest Biol. Technol. 1996, 7:243-251.
39. Nakamoto H., Vìgh L. The small heat shock proteins and their clients. Cell Mol. Life Sci. 2007, 64:294-306.
40. Niu Y., Figueroa P., Browse J. Characterization of JAZ-interacting bHLH transcription factors that regulate jasmonate responses in Arabidopsis. J. Exp. Bot. 2011, 62:2143-2154.
41. Park Y.-S., Leontowicz H., Leontowicz M., Namiesnik J., Suhaj M., Cvikrová M., Martincová O., Weisz M., Gorinstein S. Comparison of the contents of bioactive compounds and the level of antioxidant activity in different kiwifruit cultivars. J. Food Compos. Anal. 2010, 24:963-970.
42. Posé D., Castanedo I., Borsani O., Nieto B., Rosado A., Taconnat L., Ferrer A., Dolan L., Valpuesta V., Botella M.A. Identification of the Arabidopsis dry2/sqe1-5 mutant reveals a central role for sterols in drought tolerance and regulation of reactive oxygen species. Plant J. 2009, 59:63-76.
43. Prinsi B., Negri A.S., Fedeli C., Morgutti S., Negrini N., Cocucci M., Espen L. Peach fruit ripening: a proteomic comparative analysis of the mesocarp of two cultivars with different flesh firmness at two ripening stages. Phytochemistry 2011, 72:1251-1262.
44. Ramina A., Tonutti P., Mcglasson B. Ripening, nutrition and postharvest physiology. The Peach: Botany, Production and Uses 2008, 550-574. CAB International, UK. D. Layne, D. Bassi (Eds.).
45. Reyes L.F., Villarreal J.E., Cisneros-Zevallos L. The increase in antioxidant capacity after wounding depends on the type of fruit or vegetable tissue. Food Chem. 2006, 101:1254-1262.
46. Reymond P., Weber H., Damond M., Farmer E.E. Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis. Plant Cell 2000, 12:707-719.
47. Rodríguez-López J.N., Espín J.C., del Amor F., Tudela J., Martínez V., Cerdá A., García-Cánovas F. Purification and kinetic characterization of an anionic peroxidase from melon (Cucumis melo L.) cultivated under different salinity conditions. J. Agric. Food Chem. 2000, 48:1537-1541.
48. Ruiz K.B., Trainotti L., Bonghi C., Ziosi V., Costa G., Torrigiani P. Early methyl jasmonate application to peach delays fruit/seed development by altering the expression of multiple hormone-related genes. J. Plant Growth Regul. 2013, 10 1007/s00344-013-9351-7.
49. Sena G., Wang X., Liu H.Y., Hofhuis H., Birnbaum K.D. Organ regeneration does not require a functional stem cell niche in plants. Nature 2009, 457:1150-1153.
50. Shanker A.K., Venkateswarlu B. Abiotic Stress Response in Plants - Physiological, Biochemical and Genetic Perspectives 2011, Intech.
51. Sherf B.A., Kolattukudy P.E. Developmentally regulated expression of the wound-and pathogen-responsive tomato anionic peroxidase in green fruits. Plant J. 1993, 3:829-833.
52. Sila D.N., Van Buggenhout S., Duvetter T., Fraeye I., De Roeck A., Van Loey A., Hendrickx M. Pectins in processed fruits and vegetables: part II - structure-function relationships. Compr. Rev. Food Sci. Food Saf. 2009, 8:104-886.
53. Skibbe M., Qu N., Galis L., Baldwin I.T. Induced plant defenses in the natural environment: Nicotiana attenuata WRKY3 and WRKY6 coordinate responses to herbivory. Plant Cell 2008, 20:1984-2000.
54. Smyth J.K. Limma: linear models for microarray data. Bioinformatics and Computational Biology Solutions Using R and Bioconductor 2005, 397-420. Springer, New York. R. Gentleman (Ed.).
55. Spotts R.A., Sanderson P.G., Lennox C.L., Sugar D., Cervantes L.A. Wounding, wound healing and staining of mature pear fruit. Postharvest Biol. Technol. 1998, 13:27-36.
56. 2 and resistance to Botrytis cinerea decline with the ripening of apple fruit. Postharvest Biol. Technol. 2011, 62:64-70.
57. Szakiel A., Paczkowski C., Pensec F., Bertsch C. Fruit cuticular waxes as a source of biologically active triterpenoids. Phytochem. Rev. 2012, 11:263-284.
58. The International Peach Genome Initiative The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution. Nat. Genet. 2013, 45:487-494.
59. Toivonen P.M.A., Brummell D.A. Biochemical bases of appearance and texture changes in fresh-cut fruit and vegetables. Postharvest Biol. Technol. 2008, 48:1-14.
60. Tosetti R., Martinelli F., Tonutti P., Barupal D.K. Metabolomics approach to studying minimally processed peach (Prunus persica) fruit. Acta Hortic. 2012, 934:1017-1021.
61. Trainotti L., Cagnin S., Forcato C., Bonghi C., Dhingra A., Koepke T., Prat L., Maldonado J., Silva H. Functional genomics: transcriptomics. Genetics Genomics and Breed of Stone Fruits 2012, 292-322. CRC Press Book, Boca Raton, FL. C. Kole, A.G. Abbott (Eds.).
62. Trent J.D. A review of acquired thermotolerance, heat-shock proteins and molecular chaperones in Archaea. FEMS Microbiol. Rev. 1996, 18:249-258.
63. Trinidade I., Santos D., Dalmay T., Fevereiro P. Facing the environment: small RNAs and the regulation of gene expression under abiotic stress in plants. Abiotic Stress Response in Plants - Physiological, Biochemical and Genetic Perspectives 2011, 113-136. Intech. A.K. Shanker, B. Venkateswarlu (Eds.).
64. Untergasser A., Nijveen H., Rao X., Bisseling T., Geurts R., Leunissen J.A.M. Primer3Plus, an enhanced web interface to Primer3. Nucleic Acids Res. 2007, 35:W71-W74.
65. Usadel B., Poree F., Nagel A., Lohse M., Czedik-Eysenberg A., Stitt M. A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, maize. Plant Cell Environ. 2009, 32:1211-1229.
66. Usenik V., Stampara F., Kastelec D. Phytochemicals in fruits of two Prunus domestica L. plum cultivars during ripening. J. Sci. Food Agric. 2012, 93:681-692.
67. Vezzaro A., Krause S.T., Nonis A., Ramina A., Degenhardt J., Ruperti B. Isolation and characterization of terpene synthases potentially involved in flavor development of ripening olive (Olea europaea) fruits. J. Plant Physiol. 2012, 169:908-914.
68. Vishwanath K., Prasanna K.P.R., Pallvi H.M., Rajendra Prasad S., Ramegowda, Devaraju P.J., Ananthararayanan T.V. Identification of tomato (Lycopersicon esculentum) varieties through total soluble seed proteins. Res. J. Agric. Sci. 2011, 2:8-12.
69. Wasternack C., Hause B. Jasmonates: biosynthesis, perception, signal transduction and action in plant stress response, growth and development. An update to the 2007 review in Annals of Botany. Ann. Bot. 2013, 111:1021-1058.
70. Wang C.S., Vodkin L.O. Extraction of RNA from tissues containing high levels of procyanidins that bind RNA. Plant Mol. Biol. Rep. 1994, 12:132-145.
71. Yin X., Allan A., Xua Q., Burdon J., Dejnoprat S., Chena K., Ferguson I. Differential expression of kiwifruit ERF genes in response to postharvest abiotic stress. Postharvest Biol. Technol. 2012, 66:1-7.
72. Zhang Z.J., Huang R.F. Enhanced tolerance to freezing in tobacco and tomato overexpressing transcription factor TERF2/LeERF2 is modulated by ethylene biosynthesis. Plant Mol. Biol. 2010, 72:241-249.
73. Zhang H.W., Huang Z.J., Xie B.Y., Chen Q., Tian X., Zhang X.L., Zhang H.B., Lu X.Y., Huang D.F., Huang R.F. The ethylene-, jasmonate-, abscisic acid- and NaCl-responsive tomato transcription factor JERF1 modulates expression of GCC box-containing genes and salt tolerance in tobacco. Planta 2004, 220:262-270.
74. Zhang M., Leng P., Zhang G., Lib X. Cloning and functional analysis of 9-cis-epoxycarotenoid dioxygenase (NCED) genes encoding a key enzyme during abscisic acid biosynthesis from peach and grape fruits. J. Plant Physiol. 2009, 166:1241-1252.
75. Zhang C.H., Shangguan L.F., Ma R.F., Sun X., Tao R., Guo L., Korir N.H., Yu M.L. Genome-wide analysis of the AP2/ERF superfamily in peach (Prunus persica). Genet. Mol. Res. 2012, 11:4789-4809.
76. Zhou L., Thornburg R. Wound-inducible genes in plants. Inducible Gene Expression 1999, 127-156. CAB International, Wallingford, UK. P.H.S. Reynolds (Ed.).