-
1
-
-
33745951984
-
On the origin and functions of RNA-mediated silencing: from protists to man
-
Cerutti H, Casas-Mollano JA, (2006) On the origin and functions of RNA-mediated silencing: from protists to man. Curr Genet 50: 81-99.
-
(2006)
Curr Genet
, vol.50
, pp. 81-99
-
-
Cerutti, H.1
Casas-Mollano, J.A.2
-
3
-
-
5144225452
-
Biochemical identification of Argonaute 2 as the sole protein required for RNA-induced silencing complex activity
-
Rand TA, Ginalski K, Grishin NV, Wang X, (2004) Biochemical identification of Argonaute 2 as the sole protein required for RNA-induced silencing complex activity. Proc Natl Acad Sci U S A 101: 14385-14389.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 14385-14389
-
-
Rand, T.A.1
Ginalski, K.2
Grishin, N.V.3
Wang, X.4
-
4
-
-
0035942736
-
Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
-
Elbashir SM, Harborth J, Lendeckel W, Yalcin A, Weber K, et al. (2001) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411: 494-498.
-
(2001)
Nature
, vol.411
, pp. 494-498
-
-
Elbashir, S.M.1
Harborth, J.2
Lendeckel, W.3
Yalcin, A.4
Weber, K.5
-
5
-
-
83555173316
-
Antiviral RNAi: translating science towards therapeutic success
-
Shah PS, Schaffer DV, (2011) Antiviral RNAi: translating science towards therapeutic success. Pharm Res 28: 2966-2982.
-
(2011)
Pharm Res
, vol.28
, pp. 2966-2982
-
-
Shah, P.S.1
Schaffer, D.V.2
-
6
-
-
39549113714
-
Solid-phase synthesis of siRNA oligonucleotides
-
Beaucage SL, (2008) Solid-phase synthesis of siRNA oligonucleotides. Curr Opin Drug Discov Devel 11: 203-216.
-
(2008)
Curr Opin Drug Discov Devel
, vol.11
, pp. 203-216
-
-
Beaucage, S.L.1
-
7
-
-
33847330730
-
Large-scale production of dsRNA and siRNA pools for RNA interference utilizing bacteriophage f6 RNA-dependent RNA polymerase
-
Aalto AP, Sarin LP, van Dijk AA, Saarma M, Poranen MM, et al. (2007) Large-scale production of dsRNA and siRNA pools for RNA interference utilizing bacteriophage f6 RNA-dependent RNA polymerase. RNA 13: 422-429.
-
(2007)
RNA
, vol.13
, pp. 422-429
-
-
Aalto, A.P.1
Sarin, L.P.2
van Dijk, A.A.3
Saarma, M.4
Poranen, M.M.5
-
8
-
-
0012756249
-
RNA interference in mammalian cells using siRNAs synthesized with T7 RNA polymerase
-
Donze O, Picard D, (2002) RNA interference in mammalian cells using siRNAs synthesized with T7 RNA polymerase. Nucleic Acids Res 30: e46.
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Donze, O.1
Picard, D.2
-
9
-
-
0037335550
-
Recombinant Dicer efficiently converts large dsRNAs into siRNAs suitable for gene silencing
-
Myers JW, Jones JT, Meyer T, Ferrell JE Jr, (2003) Recombinant Dicer efficiently converts large dsRNAs into siRNAs suitable for gene silencing. Nat Biotechnol 21: 324-328.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 324-328
-
-
Myers, J.W.1
Jones, J.T.2
Meyer, T.3
Ferrell Jr., J.E.4
-
10
-
-
0037162522
-
Short RNA duplexes produced by hydrolysis with Escherichia coli RNase III mediate effective RNA interference in mammalian cells
-
Yang D, Buchholz F, Huang Z, Goga A, Chen CY, et al. (2002) Short RNA duplexes produced by hydrolysis with Escherichia coli RNase III mediate effective RNA interference in mammalian cells. Proc Natl Acad Sci U S A 99: 9942-9947.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 9942-9947
-
-
Yang, D.1
Buchholz, F.2
Huang, Z.3
Goga, A.4
Chen, C.Y.5
-
11
-
-
1542306855
-
Interferon induction by siRNAs and ssRNAs synthesized by phage polymerase
-
Kim DH, Longo M, Han Y, Lundberg P, Cantin E, et al. (2004) Interferon induction by siRNAs and ssRNAs synthesized by phage polymerase. Nat Biotechnol 22: 321-325.
-
(2004)
Nat Biotechnol
, vol.22
, pp. 321-325
-
-
Kim, D.H.1
Longo, M.2
Han, Y.3
Lundberg, P.4
Cantin, E.5
-
13
-
-
70350517279
-
Inhibition of coxsackievirus B3 and related enteroviruses by antiviral short interfering RNA pools produced using phi6 RNA-dependent RNA polymerase
-
Nygårdas M, Vuorinen T, Aalto AP, Bamford DH, Hukkanen V, (2009) Inhibition of coxsackievirus B3 and related enteroviruses by antiviral short interfering RNA pools produced using phi6 RNA-dependent RNA polymerase. J Gen Virol 90: 2468-2473.
-
(2009)
J Gen Virol
, vol.90
, pp. 2468-2473
-
-
Nygårdas, M.1
Vuorinen, T.2
Aalto, A.P.3
Bamford, D.H.4
Hukkanen, V.5
-
14
-
-
18744382144
-
Hepatitis C virus replicons escape RNA interference induced by a short interfering RNA directed against the NS5b coding region
-
Wilson JA, Richardson CD, (2005) Hepatitis C virus replicons escape RNA interference induced by a short interfering RNA directed against the NS5b coding region. J Virol 79: 7050-7058.
-
(2005)
J Virol
, vol.79
, pp. 7050-7058
-
-
Wilson, J.A.1
Richardson, C.D.2
-
15
-
-
33645720317
-
Postexposure protection of guinea pigs against a lethal ebola virus challenge is conferred by RNA interference
-
Geisbert TW, Hensley LE, Kagan E, Yu EZ, Geisbert JB, et al. (2006) Postexposure protection of guinea pigs against a lethal ebola virus challenge is conferred by RNA interference. J Infect Dis 193: 1650-1657.
-
(2006)
J Infect Dis
, vol.193
, pp. 1650-1657
-
-
Geisbert, T.W.1
Hensley, L.E.2
Kagan, E.3
Yu, E.Z.4
Geisbert, J.B.5
-
16
-
-
11144239376
-
Poliovirus escape from RNA interference: short interfering RNA-target recognition and implications for therapeutic approaches
-
Gitlin L, Stone JK, Andino R, (2005) Poliovirus escape from RNA interference: short interfering RNA-target recognition and implications for therapeutic approaches. J Virol 79: 1027-1035.
-
(2005)
J Virol
, vol.79
, pp. 1027-1035
-
-
Gitlin, L.1
Stone, J.K.2
Andino, R.3
-
17
-
-
33747762617
-
Enzymatically prepared RNAi libraries
-
Buchholz F, Kittler R, Slabicki M, Theis M, (2006) Enzymatically prepared RNAi libraries. Nat Methods 3: 696-700.
-
(2006)
Nat Methods
, vol.3
, pp. 696-700
-
-
Buchholz, F.1
Kittler, R.2
Slabicki, M.3
Theis, M.4
-
18
-
-
0036847540
-
Ribonuclease activity and RNA binding of recombinant human Dicer
-
Provost P, Dishart D, Doucet J, Frendewey D, Samuelsson B, et al. (2002) Ribonuclease activity and RNA binding of recombinant human Dicer. EMBO J 21: 5864-5874.
-
(2002)
EMBO J
, vol.21
, pp. 5864-5874
-
-
Provost, P.1
Dishart, D.2
Doucet, J.3
Frendewey, D.4
Samuelsson, B.5
-
19
-
-
0036845374
-
Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP
-
Zhang H, Kolb FA, Brondani V, Billy E, Filipowicz W, (2002) Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP. EMBO J 21: 5875-5885.
-
(2002)
EMBO J
, vol.21
, pp. 5875-5885
-
-
Zhang, H.1
Kolb, F.A.2
Brondani, V.3
Billy, E.4
Filipowicz, W.5
-
20
-
-
30844438338
-
Structural basis for double-stranded RNA processing by Dicer
-
MacRae IJ, Zhou K, Li F, Repic A, Brooks AN, et al. (2006) Structural basis for double-stranded RNA processing by Dicer. Science 311: 195-198.
-
(2006)
Science
, vol.311
, pp. 195-198
-
-
MacRae, I.J.1
Zhou, K.2
Li, F.3
Repic, A.4
Brooks, A.N.5
-
21
-
-
0038521255
-
The efficacy of small interfering RNAs targeted to the type 1 insulin-like growth factor receptor (IGF1R) is influenced by secondary structure in the IGF1R transcript
-
Bohula EA, Salisbury AJ, Sohail M, Playford MP, Riedemann J, et al. (2003) The efficacy of small interfering RNAs targeted to the type 1 insulin-like growth factor receptor (IGF1R) is influenced by secondary structure in the IGF1R transcript. J Biol Chem 278: 15991-15997.
-
(2003)
J Biol Chem
, vol.278
, pp. 15991-15997
-
-
Bohula, E.A.1
Salisbury, A.J.2
Sohail, M.3
Playford, M.P.4
Riedemann, J.5
-
22
-
-
0035859929
-
Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems
-
Caplen NJ, Parrish S, Imani F, Fire A, Morgan RA, (2001) Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems. Proc Natl Acad Sci U S A 98: 9742-9747.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 9742-9747
-
-
Caplen, N.J.1
Parrish, S.2
Imani, F.3
Fire, A.4
Morgan, R.A.5
-
23
-
-
84857375929
-
Comprehensive evaluation of canonical versus Dicer-substrate siRNA in vitro and in vivo
-
Foster DJ, Barros S, Duncan R, Shaikh S, Cantley W, et al. (2012) Comprehensive evaluation of canonical versus Dicer-substrate siRNA in vitro and in vivo. RNA 18: 557-568.
-
(2012)
RNA
, vol.18
, pp. 557-568
-
-
Foster, D.J.1
Barros, S.2
Duncan, R.3
Shaikh, S.4
Cantley, W.5
-
24
-
-
33646891110
-
Induction of the interferon response by siRNA is cell type- and duplex length-dependent
-
Reynolds A, Anderson EM, Vermeulen A, Fedorov Y, Robinson K, et al. (2006) Induction of the interferon response by siRNA is cell type- and duplex length-dependent. RNA 12: 988-993.
-
(2006)
RNA
, vol.12
, pp. 988-993
-
-
Reynolds, A.1
Anderson, E.M.2
Vermeulen, A.3
Fedorov, Y.4
Robinson, K.5
-
25
-
-
13844281898
-
Synthetic dsRNA Dicer substrates enhance RNAi potency and efficacy
-
Kim DH, Behlke MA, Rose SD, Chang MS, Choi S, et al. (2005) Synthetic dsRNA Dicer substrates enhance RNAi potency and efficacy. Nat Biotechnol 23: 222-226.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 222-226
-
-
Kim, D.H.1
Behlke, M.A.2
Rose, S.D.3
Chang, M.S.4
Choi, S.5
-
26
-
-
37349010387
-
Inhibition of herpes simplex virus type 1 by small interfering RNA
-
Zhang YQ, Lai W, Li H, Li G, (2008) Inhibition of herpes simplex virus type 1 by small interfering RNA. Clin Exp Dermatol 33: 56-61.
-
(2008)
Clin Exp Dermatol
, vol.33
, pp. 56-61
-
-
Zhang, Y.Q.1
Lai, W.2
Li, H.3
Li, G.4
-
27
-
-
4544368489
-
Short interfering RNA-mediated inhibition of herpes simplex virus type 1 gene expression and function during infection of human keratinocytes
-
Bhuyan PK, Kariko K, Capodici J, Lubinski J, Hook LM, et al. (2004) Short interfering RNA-mediated inhibition of herpes simplex virus type 1 gene expression and function during infection of human keratinocytes. J Virol 78: 10276-10281.
-
(2004)
J Virol
, vol.78
, pp. 10276-10281
-
-
Bhuyan, P.K.1
Kariko, K.2
Capodici, J.3
Lubinski, J.4
Hook, L.M.5
-
28
-
-
84858439631
-
Small interfering RNA targeting for infected-cell polypeptide 4 inhibits herpes simplex virus type 1 replication in retinal pigment epithelial cells
-
Duan F, Ni S, Nie Y, Huang Q, Wu K, (2012) Small interfering RNA targeting for infected-cell polypeptide 4 inhibits herpes simplex virus type 1 replication in retinal pigment epithelial cells. Clin Exp Ophthalmol 40: 195-204.
-
(2012)
Clin Exp Ophthalmol
, vol.40
, pp. 195-204
-
-
Duan, F.1
Ni, S.2
Nie, Y.3
Huang, Q.4
Wu, K.5
-
29
-
-
30144434185
-
An siRNA-based microbicide protects mice from lethal herpes simplex virus 2 infection
-
Palliser D, Chowdhury D, Wang QY, Lee SJ, Bronson RT, et al. (2006) An siRNA-based microbicide protects mice from lethal herpes simplex virus 2 infection. Nature 439: 89-94.
-
(2006)
Nature
, vol.439
, pp. 89-94
-
-
Palliser, D.1
Chowdhury, D.2
Wang, Q.Y.3
Lee, S.J.4
Bronson, R.T.5
-
30
-
-
0023852747
-
Normal keratinization in a spontaneously immortalized aneuploid human keratinocyte cell line
-
Boukamp P, Petrussevska RT, Breitkreutz D, Hornung J, Markham A, et al. (1988) Normal keratinization in a spontaneously immortalized aneuploid human keratinocyte cell line. J Cell Biol 106: 761-771.
-
(1988)
J Cell Biol
, vol.106
, pp. 761-771
-
-
Boukamp, P.1
Petrussevska, R.T.2
Breitkreutz, D.3
Hornung, J.4
Markham, A.5
-
31
-
-
0026560654
-
In vitro packaging and replication of individual genomic segments of bacteriophage f6 RNA
-
Gottlieb P, Strassman J, Qiao X, Frilander M, Frucht A, et al. (1992) In vitro packaging and replication of individual genomic segments of bacteriophage f6 RNA. J Virol 66: 2611-2616.
-
(1992)
J Virol
, vol.66
, pp. 2611-2616
-
-
Gottlieb, P.1
Strassman, J.2
Qiao, X.3
Frilander, M.4
Frucht, A.5
-
32
-
-
58149086118
-
Herpes simplex virus type 1 Us3 gene deletion influences toll-like receptor responses in cultured monocytic cells
-
Peri P, Mattila RK, Kantola H, Broberg E, Karttunen HS, et al. (2008) Herpes simplex virus type 1 Us3 gene deletion influences toll-like receptor responses in cultured monocytic cells. Virol J 5: 140.
-
(2008)
Virol J
, vol.5
, pp. 140
-
-
Peri, P.1
Mattila, R.K.2
Kantola, H.3
Broberg, E.4
Karttunen, H.S.5
-
33
-
-
79960122565
-
Treatment of experimental autoimmune encephalomyelitis in SJL/J mice with a replicative HSV-1 vector expressing interleukin-5
-
Nygårdas M, Aspelin C, Paavilainen H, Roytta M, Waris M, et al. (2011) Treatment of experimental autoimmune encephalomyelitis in SJL/J mice with a replicative HSV-1 vector expressing interleukin-5. Gene Ther 18: 646-655.
-
(2011)
Gene Ther
, vol.18
, pp. 646-655
-
-
Nygårdas, M.1
Aspelin, C.2
Paavilainen, H.3
Roytta, M.4
Waris, M.5
-
34
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
36
-
-
80051952088
-
Innate immune responses in human monocyte-derived dendritic cells are highly dependent on the size and the 5′ phosphorylation of RNA molecules
-
Jiang M, Osterlund P, Sarin LP, Poranen MM, Bamford DH, et al. (2011) Innate immune responses in human monocyte-derived dendritic cells are highly dependent on the size and the 5′ phosphorylation of RNA molecules. J Immunol 187: 1713-1721.
-
(2011)
J Immunol
, vol.187
, pp. 1713-1721
-
-
Jiang, M.1
Osterlund, P.2
Sarin, L.P.3
Poranen, M.M.4
Bamford, D.H.5
-
37
-
-
4544305449
-
Effects of length and location on the cellular response to double-stranded RNA
-
Wang Q, Carmichael GG, (2004) Effects of length and location on the cellular response to double-stranded RNA. Microbiol Mol Biol Rev 68: 432-452.
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 432-452
-
-
Wang, Q.1
Carmichael, G.G.2
-
38
-
-
34250643646
-
Structure of Dicer and mechanistic implications for RNAi
-
Macrae IJ, Li F, Zhou K, Cande WZ, Doudna JA, (2006) Structure of Dicer and mechanistic implications for RNAi. Cold Spring Harb Symp Quant Biol 71: 73-80.
-
(2006)
Cold Spring Harb Symp Quant Biol
, vol.71
, pp. 73-80
-
-
Macrae, I.J.1
Li, F.2
Zhou, K.3
Cande, W.Z.4
Doudna, J.A.5
-
39
-
-
22344454846
-
Sequence-dependent stimulation of the mammalian innate immune response by synthetic siRNA
-
Judge AD, Sood V, Shaw JR, Fang D, McClintock K, et al. (2005) Sequence-dependent stimulation of the mammalian innate immune response by synthetic siRNA. Nat Biotechnol 23: 457-462.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 457-462
-
-
Judge, A.D.1
Sood, V.2
Shaw, J.R.3
Fang, D.4
McClintock, K.5
-
40
-
-
22844448088
-
Functional polarity is introduced by Dicer processing of short substrate RNAs
-
Rose SD, Kim DH, Amarzguioui M, Heidel JD, Collingwood MA, et al. (2005) Functional polarity is introduced by Dicer processing of short substrate RNAs. Nucleic Acids Res 33: 4140-4156.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 4140-4156
-
-
Rose, S.D.1
Kim, D.H.2
Amarzguioui, M.3
Heidel, J.D.4
Collingwood, M.A.5
-
41
-
-
77954350917
-
Modified dsRNAs that are not processed by Dicer maintain potency and are incorporated into the RISC
-
Salomon W, Bulock K, Lapierre J, Pavco P, Woolf T, et al. (2010) Modified dsRNAs that are not processed by Dicer maintain potency and are incorporated into the RISC. Nucleic Acids Res 38: 3771-3779.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3771-3779
-
-
Salomon, W.1
Bulock, K.2
Lapierre, J.3
Pavco, P.4
Woolf, T.5
-
42
-
-
84055222215
-
Dicer is dispensable for asymmetric RISC loading in mammals
-
Betancur JG, Tomari Y, (2012) Dicer is dispensable for asymmetric RISC loading in mammals. RNA 18: 24-30.
-
(2012)
RNA
, vol.18
, pp. 24-30
-
-
Betancur, J.G.1
Tomari, Y.2
-
43
-
-
1542336952
-
Rational siRNA design for RNA interference
-
Reynolds A, Leake D, Boese Q, Scaringe S, Marshall WS, et al. (2004) Rational siRNA design for RNA interference. Nat Biotechnol 22: 326-330.
-
(2004)
Nat Biotechnol
, vol.22
, pp. 326-330
-
-
Reynolds, A.1
Leake, D.2
Boese, Q.3
Scaringe, S.4
Marshall, W.S.5
-
44
-
-
21844471799
-
Sequence characteristics of functional siRNAs
-
Jagla B, Aulner N, Kelly PD, Song D, Volchuk A, et al. (2005) Sequence characteristics of functional siRNAs. RNA 11: 864-872.
-
(2005)
RNA
, vol.11
, pp. 864-872
-
-
Jagla, B.1
Aulner, N.2
Kelly, P.D.3
Song, D.4
Volchuk, A.5
-
45
-
-
33745608078
-
Off-target effects by siRNA can induce toxic phenotype
-
Fedorov Y, Anderson EM, Birmingham A, Reynolds A, Karpilow J, et al. (2006) Off-target effects by siRNA can induce toxic phenotype. RNA 12: 1188-1196.
-
(2006)
RNA
, vol.12
, pp. 1188-1196
-
-
Fedorov, Y.1
Anderson, E.M.2
Birmingham, A.3
Reynolds, A.4
Karpilow, J.5
-
46
-
-
34247272091
-
Design of active small interfering RNAs
-
Peek AS, Behlke MA, (2007) Design of active small interfering RNAs. Curr Opin Mol Ther 9: 110-118.
-
(2007)
Curr Opin Mol Ther
, vol.9
, pp. 110-118
-
-
Peek, A.S.1
Behlke, M.A.2
|