-
1
-
-
0042768158
-
Genome-wide insertional mutagenesis of Arabidopsis thaliana
-
Alonso JM, Stepanova AN, Leisse TJ, Kim CJ, Chen H, Shinn P, Stevenson DK, Zimmerman J, Barajas P, Cheuk R, Gadrinab C, Heller C, Jeske A, Koesema E, Meyers CC, Parker H, Prednis L, Ansari Y, Choy N, Deen H, Geralt M, Hazari N, Hom E, Karnes M, Mulholland C, Ndubaku R, Schmidt I, Guzman P, Aguilar-Henonin L, Schmid M, Weigel D, Carter DE, Marchand T, Risseeuw E, Brogden D, Zeko A, Crosby WL, Berry CC, Ecker JR (2003) Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science 301:653-657
-
(2003)
Science
, vol.301
, pp. 653-657
-
-
Alonso, J.M.1
Stepanova, A.N.2
Leisse, T.J.3
Kim, C.J.4
Chen, H.5
Shinn, P.6
Stevenson, D.K.7
Zimmerman, J.8
Barajas, P.9
Cheuk, R.10
Gadrinab, C.11
Heller, C.12
Jeske, A.13
Koesema, E.14
Meyers, C.C.15
Parker, H.16
Prednis, L.17
Ansari, Y.18
Choy, N.19
Deen, H.20
Geralt, M.21
Hazari, N.22
Hom, E.23
Karnes, M.24
Mulholland, C.25
Ndubaku, R.26
Schmidt, I.27
Guzman, P.28
Aguilar-Henonin, L.29
Schmid, M.30
Weigel, D.31
Carter, D.E.32
Marchand, T.33
Risseeuw, E.34
Brogden, D.35
Zeko, A.36
Crosby, W.L.37
Berry, C.C.38
Ecker, J.R.39
more..
-
2
-
-
34347382316
-
Arabidopsis VIRE2 INTERACTING PROTEIN2 is required for Agrobacterium T-DNA integration in plants
-
Anand A, Krichevsky A, Schornack S, Lahaye T, Tz fira T, Tang Y, Citovsky V, Mysore KS (2007a) Arabidopsis VIRE2 INTERACTING PROTEIN2 is required for Agrobacterium T-DNA integration in plants. Plant Cell 19:1695-1708
-
(2007)
Plant Cell
, vol.19
, pp. 1695-1708
-
-
Anand, A.1
Krichevsky, A.2
Schornack, S.3
Lahaye, T.4
Tzfira, T.5
Tang, Y.6
Citovsky, V.7
Mysore, K.S.8
-
3
-
-
33845603601
-
Identification and characterization of plant genes involved in Agrobacterium-mediated plant transformation by virus-induced gene silencing
-
Anand A, Vaghchhipawala Z, Ryu CM, Kang L, Wang K, del-Pozo O, Martin GB, Mysore KS (2007b) Identification and characterization of plant genes involved in Agrobacterium-mediated plant transformation by virus-induced gene silencing. Mol Plant Microbe Interact 20:41-52
-
(2007)
Mol Plant Microbe Interact
, vol.20
, pp. 41-52
-
-
Anand, A.1
Vaghchhipawala, Z.2
Ryu, C.M.3
Kang, L.4
Wang Del-Pozo, K.O.5
Martin, G.B.6
Mysore, K.S.7
-
4
-
-
79953800166
-
Recent advances in plant transformation
-
Barampuram S, Zhang ZJ (2011) Recent advances in plant transformation. Methods Mol Biol 701:1-35
-
(2011)
Methods Mol Biol
, vol.701
, pp. 1-35
-
-
Barampuram, S.1
Zhang, Z.J.2
-
5
-
-
0025019538
-
Intermolecular homologous recombination in plants
-
Baur M, Potrykus I, Paszkowski J (1990) Intermolecular homologous recombination in plants. Mol Cell Biol 10:492-500
-
(1990)
Mol Cell Biol
, vol.10
, pp. 492-500
-
-
Baur, M.1
Potrykus, I.2
Paszkowski, J.3
-
6
-
-
0027435506
-
In planta Agrobacterium-mediated gene transfer by in filtration of adult Arabidopsis thaliana plants
-
Bechtold N, Ellis J, Pelletier G (1993) In planta Agrobacterium-mediated gene transfer by in filtration of adult Arabidopsis thaliana plants. C R Acad Sci Ser III Sci Vie Life Sci 316:1194-1199
-
(1993)
C R Acad Sci ser III Sci Vie Life Sci
, vol.316
, pp. 1194-1199
-
-
Bechtold, N.1
Ellis, J.2
Pelletier, G.3
-
7
-
-
0033587679
-
A tool for functional plant genomics: Chimeric RNA/DNA oligonucleotides cause in vivo gene-specific mutations
-
Beetham PR, Kipp PB, Sawycky XL, Arntzen CJ, May GD (1999) A tool for functional plant genomics: chimeric RNA/DNA oligonucleotides cause in vivo gene-specific mutations. Proc Natl Acad Sci USA 96:8774-8778
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 8774-8778
-
-
Beetham, P.R.1
Kipp, P.B.2
Sawycky, X.L.3
Arntzen, C.J.4
May, G.D.5
-
8
-
-
0036021389
-
Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases
-
Bibikova M, Golic M, Golic KG, Carroll D (2002) Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases. Genetics 161:1169-1175
-
(2002)
Genetics
, vol.161
, pp. 1169-1175
-
-
Bibikova, M.1
Golic, M.2
Golic, K.G.3
Carroll, D.4
-
9
-
-
0037510038
-
Enhancing gene targeting with designed zinc finger nucleases
-
Bibikova M, Beumer K, Trautman JK, Carroll D (2003) Enhancing gene targeting with designed zinc finger nucleases. Science 300:764
-
(2003)
Science
, vol.300
, pp. 764
-
-
Bibikova, M.1
Beumer, K.2
Trautman, J.K.3
Carroll, D.4
-
10
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
Boch J, Scholze H, Schornack S, Landgraf A, Hahn S, Kay S, Lahaye T, Nickstadt A, Bonas U (2009) Breaking the code of DNA binding specificity of TAL-type III effectors. Science 326:1509-1512
-
(2009)
Science
, vol.326
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
Landgraf, A.4
Hahn, S.5
Kay, S.6
Lahaye, T.7
Nickstadt, A.8
Bonas, U.9
-
12
-
-
0036958494
-
T-DNA integration into the Arabidopsis genome depends on sequences of pre-insertion sites
-
Brunaud V, Balzergue S, Dubreucq B, Aubourg S, Samson F, Chauvin S, Bechtold N, Cruaud C, DeRose R, Pelletier G, Lepiniec L, Caboche M, Lecharny A (2002) T-DNA integration into the Arabidopsis genome depends on sequences of pre-insertion sites. EMBO Rep 3:1152-1157
-
(2002)
EMBO Rep
, vol.3
, pp. 1152-1157
-
-
Brunaud, V.1
Balzergue, S.2
Dubreucq, B.3
Aubourg, S.4
Samson, F.5
Chauvin, S.6
Bechtold, N.7
Cruaud, C.8
Derose, R.9
Pelletier, G.10
Lepiniec, L.11
Caboche, M.12
Lecharny, A.13
-
13
-
-
61649085865
-
Targeted transgene integration in plant cells using designed zinc finger nucleases
-
Cai CQ, Doyon Y, Ainley WM, Miller JC, Dekelver RC, Moehle EA, Rock JM, Lee YL, Garrison R, Schulenberg L, Blue R, Worden A, Baker L, Faraji F, Zhang L, Holmes MC, Rebar EJ, Collingwood TN, Rubin-Wilson B, Gregory PD, Urnov FD, Petolino JF (2009) Targeted transgene integration in plant cells using designed zinc finger nucleases. Plant Mol Biol 69:699-709
-
(2009)
Plant Mol Biol
, vol.69
, pp. 699-709
-
-
Cai, C.Q.1
Doyon, Y.2
Ainley, W.M.3
Miller, J.C.4
Dekelver, R.C.5
Moehle, E.A.6
Rock, J.M.7
Lee, Y.L.8
Garrison, R.9
Schulenberg, L.10
Blue, R.11
Worden, A.12
Baker, L.13
Faraji, F.14
Zhang, L.15
Holmes, M.C.16
Rebar, E.J.17
Collingwood, T.N.18
Rubin-Wilson, B.19
Gregory, P.D.20
Urnov, F.D.21
Petolino, J.F.22
more..
-
14
-
-
0024328536
-
Altering the genome by homologous recombination
-
Capecchi MR (1989) Altering the genome by homologous recombination. Science 244:1288-1292
-
(1989)
Science
, vol.244
, pp. 1288-1292
-
-
Capecchi, M.R.1
-
15
-
-
79960064013
-
Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
-
Cermak T, Doyle EL, Christian M, Wang L, Zhang Y, Schmidt C, Baller JA, Somia NV, Bogdanove AJ, Voytas DF (2011) Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res 39(12):e82
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.12
-
-
Cermak, T.1
Doyle, E.L.2
Christian, M.3
Wang, L.4
Zhang, Y.5
Schmidt, C.6
Baller, J.A.7
Somia, N.V.8
Bogdanove, A.J.9
Voytas, D.F.10
-
16
-
-
78049475924
-
Xrcc1-dependent and Ku-dependent DNA double-strand break repair kinetics in Arabidopsis plants
-
Charbonnel C, Gallego ME, White CI (2010) Xrcc1-dependent and Ku-dependent DNA double-strand break repair kinetics in Arabidopsis plants. Plant J 64:280-290
-
(2010)
Plant J
, vol.64
, pp. 280-290
-
-
Charbonnel, C.1
Gallego, M.E.2
White, C.I.3
-
17
-
-
79957832472
-
Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis
-
Charbonnel C, Allain E, Gallego ME, White CI (2011) Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis. DNA Repair (Amst) 10(6):611-619
-
(2011)
DNA Repair (Amst)
, vol.10
, Issue.6
, pp. 611-619
-
-
Charbonnel, C.1
Allain, E.2
Gallego, M.E.3
White, C.I.4
-
18
-
-
78951479577
-
Targeting DNA double-strand breaks with TAL effector nucleases
-
Christian M, Cermak T, Doyle EL, Schmidt C, Zhang F, Hummel A, Bogdanove AJ, Voytas DF (2010) Targeting DNA double-strand breaks with TAL effector nucleases. Genetics 186:757-761
-
(2010)
Genetics
, vol.186
, pp. 757-761
-
-
Christian, M.1
Cermak, T.2
Doyle, E.L.3
Schmidt, C.4
Zhang, F.5
Hummel, A.6
Bogdanove, A.J.7
Voytas, D.F.8
-
19
-
-
0032447801
-
Floral dip: A simpli fied method for Agrobacterium-mediated transformation of Arabidopsis thaliana
-
Clough SJ, Bent AF (1998) Floral dip: a simpli fied method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16:735-743
-
(1998)
Plant J
, vol.16
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
20
-
-
35448970561
-
RNAi-mediated gene silencing reveals involvement of Arabidopsis chromatin-related genes in Agrobacterium-mediated root transformation
-
Crane YM, Gelvin SB (2007) RNAi-mediated gene silencing reveals involvement of Arabidopsis chromatin-related genes in Agrobacterium-mediated root transformation. Proc Natl Acad Sci USA 104:15156-15161
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 15156-15161
-
-
Crane, Y.M.1
Gelvin, S.B.2
-
21
-
-
79958065910
-
Targeted mutagenesis of duplicated genes in soybean with zinc finger nucleases
-
Curtin SJ, Zhang F, Sander JD, Haun WJ, Starker C, Baltes NJ, Reyon D, Dahlborg EJ, Goodwin MJ, Coffman AP, Dobbs D, Joung JK, Voytas DF, Stupar RM (2011) Targeted mutagenesis of duplicated genes in soybean with zinc finger nucleases. Plant Physiol 156(2):466-473
-
(2011)
Plant Physiol
, vol.156
, Issue.2
, pp. 466-473
-
-
Curtin, S.J.1
Zhang, F.2
Sander, J.D.3
Haun, W.J.4
Starker, C.5
Baltes, N.J.6
Reyon, D.7
Dahlborg, E.J.8
Goodwin, M.J.9
Coffman, A.P.10
Dobbs, D.11
Joung, J.K.12
Voytas, D.F.13
Stupar, R.M.14
-
22
-
-
0011879360
-
Expression of DNA coding for diphtheria toxin chain a is toxic to plant cells
-
Czako M, An G (1991) Expression of DNA coding for diphtheria toxin chain a is toxic to plant cells. Plant Physiol 95:687-692
-
(1991)
Plant Physiol
, vol.95
, pp. 687-692
-
-
Czako, M.1
An, G.2
-
23
-
-
36849074270
-
Homologous recombination: A basis for targeted genome optimization in crop species such as maize
-
D'Halluin K, Vanderstraeten C, Stals E, Cornelissen M, Ruiter R (2008) Homologous recombination: a basis for targeted genome optimization in crop species such as maize. Plant Biotechnol J 6:93-102
-
(2008)
Plant Biotechnol J
, vol.6
, pp. 93-102
-
-
D'Halluin, K.1
Vanderstraeten, C.2
Stals, E.3
Cornelissen, M.4
Ruiter, R.5
-
24
-
-
40649094952
-
The ongoing saga of Agrobacterium-host interactions
-
Dafny-Yelin M, Levy A, Tz fira T (2008) The ongoing saga of Agrobacterium-host interactions. Trends Plant Sci 13:102-105
-
(2008)
Trends Plant Sci
, vol.13
, pp. 102-105
-
-
Dafny-Yelin, M.1
Levy, A.2
Tzfira, T.3
-
25
-
-
70349519071
-
The T-DNA integration pattern in Arabidopsis transformants is highly determined by the transformed target cell
-
De Buck S, Podevin N, Nolf J, Jacobs A, Depicker A (2009) The T-DNA integration pattern in Arabidopsis transformants is highly determined by the transformed target cell. Plant J 60:134-145
-
(2009)
Plant J
, vol.60
, pp. 134-145
-
-
De Buck, S.1
Podevin, N.2
Nolf, J.3
Jacobs, A.4
Depicker, A.5
-
26
-
-
33947496985
-
An integrated view of gene expression and solute pro files of Arabidopsis tumors: A genome-wide approach
-
Deeken R, Engelmann JC, Efetova M, Czirjak T, Muller T, Kaiser WM, Tietz O, Krischke M, Mueller MJ, Palme K, Dandekar T, Hedrich R (2006) An integrated view of gene expression and solute pro files of Arabidopsis tumors: a genome-wide approach. Plant Cell 18:3617-3634
-
(2006)
Plant Cell
, vol.18
, pp. 3617-3634
-
-
Deeken, R.1
Engelmann, J.C.2
Efetova, M.3
Czirjak, T.4
Muller, T.5
Kaiser, W.M.6
Tietz, O.7
Krischke, M.8
Mueller, M.J.9
Palme, K.10
Dandekar, T.11
Hedrich, R.12
-
27
-
-
0026753186
-
Reexamination of gene targeting frequency as a function of the extent of homology between the targeting vector and the target locus
-
Deng C, Capecchi MR (1992) Reexamination of gene targeting frequency as a function of the extent of homology between the targeting vector and the target locus. Mol Cell Biol 12:3365-3371
-
(1992)
Mol Cell Biol
, vol.12
, pp. 3365-3371
-
-
Deng, C.1
Capecchi, M.R.2
-
28
-
-
33646863227
-
The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens
-
Ditt RF, Kerr KF, de Figueiredo P, Delrow J, Comai L, Nester EW (2006) The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. Mol Plant Microbe Interact 19:665-681
-
(2006)
Mol Plant Microbe Interact
, vol.19
, pp. 665-681
-
-
Ditt, R.F.1
Kerr, K.F.2
De Figueiredo, P.3
Delrow, J.4
Comai, L.5
Nester, E.W.6
-
29
-
-
33645957355
-
Oligonucleotide-directed gene repair in wheat using a transient plasmid gene repair assay system
-
Dong C, Beetham P, Vincent K, Sharp P (2006) Oligonucleotide-directed gene repair in wheat using a transient plasmid gene repair assay system. Plant Cell Rep 25:457-465
-
(2006)
Plant Cell Rep
, vol.25
, pp. 457-465
-
-
Dong, C.1
Beetham, P.2
Vincent, K.3
Sharp, P.4
-
30
-
-
0024446859
-
Group i introns as mobile genetic elements: Facts and mechanistic speculations -A review
-
Dujon B (1989) Group I introns as mobile genetic elements: facts and mechanistic speculations-a review. Gene 82:91-114
-
(1989)
Gene
, vol.82
, pp. 91-114
-
-
Dujon, B.1
-
31
-
-
27744530147
-
Zinc finger nucleases: Custom-designed molecular scissors for genome engineering of plant and mammalian cells
-
Durai S, Mani M, Kandavelou K, Wu J, Porteus MH, Chandrasegaran S (2005) Zinc finger nucleases: custom-designed molecular scissors for genome engineering of plant and mammalian cells. Nucleic Acids Res 33:5978-5990
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5978-5990
-
-
Durai, S.1
Mani, M.2
Kandavelou, K.3
Wu, J.4
Porteus, M.H.5
Chandrasegaran, S.6
-
32
-
-
33646185177
-
The role of AtMSH2 in homologous recombination in Arabidopsis thaliana
-
Emmanuel E, Yehuda E, Melamed-Bessudo C, Avivi-Ragolsky N, Levy AA (2006) The role of AtMSH2 in homologous recombination in Arabidopsis thaliana. EMBO Rep 7:100-105
-
(2006)
EMBO Rep
, vol.7
, pp. 100-105
-
-
Emmanuel, E.1
Yehuda, E.2
Melamed-Bessudo, C.3
Avivi-Ragolsky, N.4
Levy, A.A.5
-
33
-
-
33751581590
-
Increased frequency of homologous recombination and T-DNA integration in Arabidopsis CAF-1 mutants
-
Endo M, Ishikawa Y, Osakabe K, Nakayama S, Kaya H, Araki T, Shibahara K, Abe K, Ichikawa H, Valentine L, Hohn B, Toki S (2006a) Increased frequency of homologous recombination and T-DNA integration in Arabidopsis CAF-1 mutants. EMBO J 25:5579-5590
-
(2006)
EMBO J
, vol.25
, pp. 5579-5590
-
-
Endo, M.1
Ishikawa, Y.2
Osakabe, K.3
Nakayama, S.4
Kaya, H.5
Araki, T.6
Shibahara, K.7
Abe, K.8
Ichikawa, H.9
Valentine, L.10
Hohn, B.11
Toki, S.12
-
34
-
-
33645706715
-
Molecular characterization of true and ectopic gene targeting events at the acetolactate synthase gene in Arabidopsis
-
Endo M, Osakabe K, Ichikawa H, Toki S (2006b) Molecular characterization of true and ectopic gene targeting events at the acetolactate synthase gene in Arabidopsis. Plant Cell Physiol 47: 372-379
-
(2006)
Plant Cell Physiol
, vol.47
, pp. 372-379
-
-
Endo, M.1
Osakabe, K.2
Ichikawa, H.3
Toki, S.4
-
35
-
-
34748901919
-
Molecular breeding of a novel herbicide-tolerant rice by gene targeting
-
Endo M, Osakabe K, Ono K, Handa H, Shimizu T, Toki S (2007) Molecular breeding of a novel herbicide-tolerant rice by gene targeting. Plant J 52:157-166
-
(2007)
Plant J
, vol.52
, pp. 157-166
-
-
Endo, M.1
Osakabe, K.2
Ono, K.3
Handa, H.4
Shimizu, T.5
Toki, S.6
-
36
-
-
0037854725
-
Ku80-and DNA ligase IV-de ficient plants are sensitive to ionizing radiation and defective in T-DNA integration
-
Friesner J, Britt AB (2003) Ku80-and DNA ligase IV-de ficient plants are sensitive to ionizing radiation and defective in T-DNA integration. Plant J 34:427-440
-
(2003)
Plant J
, vol.34
, pp. 427-440
-
-
Friesner, J.1
Britt, A.B.2
-
37
-
-
8644273963
-
The INO80 protein controls homologous recombination in Arabidopsis thaliana
-
Fritsch O, Benvenuto G, Bowler C, Molinier J, Hohn B (2004) The INO80 protein controls homologous recombination in Arabidopsis thaliana. Mol Cell 16:479-485
-
(2004)
Mol Cell
, vol.16
, pp. 479-485
-
-
Fritsch, O.1
Benvenuto, G.2
Bowler, C.3
Molinier, J.4
Hohn, B.5
-
38
-
-
0032991835
-
Positive-negative selection and T-DNA stability in Arabidopsis transformation
-
Gallego ME, Sirand-Pugnet P, White CI (1999) Positive-negative selection and T-DNA stability in Arabidopsis transformation. Plant Mol Biol 39:83-93
-
(1999)
Plant Mol Biol
, vol.39
, pp. 83-93
-
-
Gallego, M.E.1
Sirand-Pugnet, P.2
White, C.I.3
-
39
-
-
0141681150
-
Ku80 plays a role in non-homologous recombination but is not required for T-DNA integration in Arabidopsis
-
Gallego ME, Bleuyard JY, Daoudal-Cotterell S, Jallut N, White CI (2003) Ku80 plays a role in non-homologous recombination but is not required for T-DNA integration in Arabidopsis. Plant J 35:557-565
-
(2003)
Plant J
, vol.35
, pp. 557-565
-
-
Gallego, M.E.1
Bleuyard, J.Y.2
Daoudal-Cotterell, S.3
Jallut, N.4
White, C.I.5
-
40
-
-
77954543556
-
Plant proteins involved in Agrobacterium-mediated genetic transformation
-
Gelvin SB (2010) Plant proteins involved in Agrobacterium-mediated genetic transformation. Annu Rev Phytopathol 48:45-68
-
(2010)
Annu Rev Phytopathol
, vol.48
, pp. 45-68
-
-
Gelvin, S.B.1
-
41
-
-
0035042256
-
Homologous recombination in planta is stimulated in the absence of Rad50
-
Gherbi H, Gallego ME, Jalut N, Lucht JM, Hohn B, White CI (2001) Homologous recombination in planta is stimulated in the absence of Rad50. EMBO Rep 2:287-291
-
(2001)
EMBO Rep
, vol.2
, pp. 287-291
-
-
Gherbi, H.1
Gallego, M.E.2
Jalut, N.3
Lucht, J.M.4
Hohn, B.5
White, C.I.6
-
42
-
-
0026073574
-
Illegitimate recombination in plants: A model for T-DNA integration
-
Gheysen G, Villarroel R, Van Montagu M (1991) Illegitimate recombination in plants: a model for T-DNA integration. Genes Dev 5:287-297
-
(1991)
Genes Dev
, vol.5
, pp. 287-297
-
-
Gheysen, G.1
Villarroel, R.2
Van Montagu, M.3
-
44
-
-
0033763414
-
Elevated levels of intrachromosomal homologous recombination in Arabidopsis overexpressing the MIM gene
-
Hanin M, Mengiste T, Bogucki A, Paszkowski J (2000) Elevated levels of intrachromosomal homologous recombination in Arabidopsis overexpressing the MIM gene. Plant J 24:183-189
-
(2000)
Plant J
, vol.24
, pp. 183-189
-
-
Hanin, M.1
Mengiste, T.2
Bogucki, A.3
Paszkowski, J.4
-
45
-
-
0035544402
-
Gene targeting in Arabidopsis
-
Hanin M, Volrath S, Bogucki A, Briker M, Ward E, Paszkowski J (2001) Gene targeting in Arabidopsis. Plant J 28:671-677
-
(2001)
Plant J
, vol.28
, pp. 671-677
-
-
Hanin, M.1
Volrath, S.2
Bogucki, A.3
Briker, M.4
Ward, E.5
Paszkowski, J.6
-
46
-
-
1642514502
-
An improved and highly standardised transformation procedure allows Efficient production of single and multiple targeted gene-knockouts in a moss, Physcomitrella patens
-
Hohe A, Egener T, Lucht JM, Holtorf H, Reinhard C, Schween G, Reski R (2004) An improved and highly standardised transformation procedure allows Efficient production of single and multiple targeted gene-knockouts in a moss, Physcomitrella patens. Curr Genet 44:339-347
-
(2004)
Curr Genet
, vol.44
, pp. 339-347
-
-
Hohe, A.1
Egener, T.2
Lucht, J.M.3
Holtorf, H.4
Reinhard, C.5
Schween, G.6
Reski, R.7
-
48
-
-
77955395955
-
A transient assay for monitoring zinc finger nuclease activity at endogenous plant gene targets
-
Hoshaw JP, Unger-Wallace E, Zhang F, Voytas DF (2010) A transient assay for monitoring zinc finger nuclease activity at endogenous plant gene targets. Methods Mol Biol 649:299-313
-
(2010)
Methods Mol Biol
, vol.649
, pp. 299-313
-
-
Hoshaw, J.P.1
Unger-Wallace, E.2
Zhang, F.3
Voytas, D.F.4
-
49
-
-
0013402003
-
Molecular characterisation of homologous recombination events in the moss Physcomitrella patens
-
Petch JC, Latché A, Bouzayen M (eds) SFPV-INRA, Toulouse
-
Houba-Hérin N, Reynolds S, Schaefer D, von Schwartzenberg K, Laloue M (1997) Molecular characterisation of homologous recombination events in the moss Physcomitrella patens. In: Petch JC, Latché A, Bouzayen M (eds) Plant Sciences, 3e Colloque général de la Société Française de Physiologie Végétale. SFPV-INRA, Toulouse, pp 22-23
-
(1997)
Plant Sciences, 3e Colloque Général de la Société Française de Physiologie Végétale
, pp. 22-23
-
-
Houba-Hérin, N.1
Reynolds, S.2
Schaefer, D.3
Von Schwartzenberg, K.4
Laloue, M.5
-
50
-
-
0028226641
-
High fidelity extrachromosomal recombination and gene targeting in plants
-
Hrouda M, Paszkowski J (1994) High fidelity extrachromosomal recombination and gene targeting in plants. Mol Gen Genet 243:106-111
-
(1994)
Mol Gen Genet
, vol.243
, pp. 106-111
-
-
Hrouda, M.1
Paszkowski, J.2
-
51
-
-
26444579290
-
Modification of endogenous natural genes by gene targeting in rice and other higher plants
-
Iida S, Terada R (2005) Modification of endogenous natural genes by gene targeting in rice and other higher plants. Plant Mol Biol 59:205-219
-
(2005)
Plant Mol Biol
, vol.59
, pp. 205-219
-
-
Iida, S.1
Terada, R.2
-
52
-
-
0022399493
-
An intron-encoded protein is active in a gene conversion process that spreads an intron into a mitochondrial gene
-
Jacquier A, Dujon B (1985) An intron-encoded protein is active in a gene conversion process that spreads an intron into a mitochondrial gene. Cell 41:383-394
-
(1985)
Cell
, vol.41
, pp. 383-394
-
-
Jacquier, A.1
Dujon, B.2
-
53
-
-
49249114175
-
Efficient transfer of base changes from a vector to the rice genome by homologous recombination: Involvement of heteroduplex formation and mismatch correction
-
Johzuka-Hisatomi Y, Terada R, Iida S (2008) Efficient transfer of base changes from a vector to the rice genome by homologous recombination: involvement of heteroduplex formation and mismatch correction. Nucleic Acids Res 36:4727-4735
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4727-4735
-
-
Johzuka-Hisatomi, Y.1
Terada, R.2
Iida, S.3
-
54
-
-
0030782702
-
Targeted disruption in Arabidopsis
-
Kempin SA, Liljegren SJ, Block LM, Rounsley SD, Yanofsky MF, Lam E (1997) Targeted disruption in Arabidopsis. Nature 389:802-803
-
(1997)
Nature
, vol.389
, pp. 802-803
-
-
Kempin, S.A.1
Liljegren, S.J.2
Block, L.M.3
Rounsley, S.D.4
Yanofsky, M.F.5
Lam, E.6
-
55
-
-
34548128408
-
Genome-wide analysis of Agrobacterium T-DNA integration sites in the Arabidopsis genome generated under non-selective conditions
-
Kim SI, Veena HJ, Gelvin SB (2007) Genome-wide analysis of Agrobacterium T-DNA integration sites in the Arabidopsis genome generated under non-selective conditions. Plant J 51:779-91
-
(2007)
Plant J
, vol.51
, pp. 779-791
-
-
Kim, S.I.1
Veena, H.J.2
Gelvin, S.B.3
-
56
-
-
77449139581
-
Genome editing with modularly assembled zinc-finger nucleases
-
author reply 91-2
-
Kim JS, Lee HJ, Carroll D (2010) Genome editing with modularly assembled zinc-finger nucleases. Nat Methods 7:91, author reply 91-2
-
(2010)
Nat Methods
, vol.7
, pp. 91
-
-
Kim, J.S.1
Lee, H.J.2
Carroll, D.3
-
58
-
-
45849091166
-
Functional conservation of the yeast and Arabidopsis RAD54-like genes
-
Klutstein M, Shaked H, Sherman A, Avivi-Ragolsky N, Shema E, Zenvirth D, Levy AA, Simchen G (2008) Functional conservation of the yeast and Arabidopsis RAD54-like genes. Genetics 178:2389-2397
-
(2008)
Genetics
, vol.178
, pp. 2389-2397
-
-
Klutstein, M.1
Shaked, H.2
Sherman, A.3
Avivi-Ragolsky, N.4
Shema, E.5
Zenvirth, D.6
Levy, A.A.7
Simchen, G.8
-
59
-
-
0037648962
-
Chimeric RNA/DNA oligonucleotide-based site-specific modification of the tobacco acetolactate syntase gene
-
Kochevenko A, Willmitzer L (2003) Chimeric RNA/DNA oligonucleotide-based site-specific modification of the tobacco acetolactate syntase gene. Plant Physiol 132:174-184
-
(2003)
Plant Physiol
, vol.132
, pp. 174-184
-
-
Kochevenko, A.1
Willmitzer, L.2
-
60
-
-
84865406232
-
Plant genome engineering using zinc finger nucleases
-
Jain SM, Brar DS (eds) Springer, New York
-
Kumar S, Thompson WF (2009) Plant genome engineering using zinc finger nucleases. In: Jain SM, Brar DS (eds) Molecular Techniques in Crop Improvement. Springer, New York, pp 579-590
-
(2009)
Molecular Techniques in Crop Improvement
, pp. 579-590
-
-
Kumar, S.1
Thompson, W.F.2
-
61
-
-
33749068301
-
Will you let me use your nucleus? How Agrobacterium gets its T-DNA expressed in the host plant cell
-
Lacroix B, Li J, Tz fira T, Citovsky V (2006) Will you let me use your nucleus? How Agrobacterium gets its T-DNA expressed in the host plant cell. Can J Physiol Pharmacol 84:333-345
-
(2006)
Can J Physiol Pharmacol
, vol.84
, pp. 333-345
-
-
Lacroix, B.1
Li, J.2
Tzfira, T.3
Citovsky, V.4
-
62
-
-
0025429006
-
Homologous recombination in plant cells after Agrobacterium-mediated transformation
-
Lee KY, Lund P, Lowe K, Dunsmuir P (1990) Homologous recombination in plant cells after Agrobacterium-mediated transformation. Plant Cell 2:415-425
-
(1990)
Plant Cell
, vol.2
, pp. 415-425
-
-
Lee, K.Y.1
Lund, P.2
Lowe, K.3
Dunsmuir, P.4
-
63
-
-
70849088705
-
Agrobacterium tumefaciens promotes tumor induction by modulating pathogen defense in Arabidopsis thaliana
-
Lee CW, Efetova M, Engelmann JC, Kramell R, Wasternack C, Ludwig-Muller J, Hedrich R, Deeken R (2009) Agrobacterium tumefaciens promotes tumor induction by modulating pathogen defense in Arabidopsis thaliana. Plant Cell 21:2948-2962
-
(2009)
Plant Cell
, vol.21
, pp. 2948-2962
-
-
Lee, C.W.1
Efetova, M.2
Engelmann, J.C.3
Kramell, R.4
Wasternack, C.5
Ludwig-Muller, J.6
Hedrich, R.7
Deeken, R.8
-
64
-
-
11144227419
-
A novel reporter for intrachromosomal homoeologous recombination in Arabidopsis thaliana
-
Li L, Santerre-Ayotte S, Boivin EB, Jean M, Belzile F (2004) A novel reporter for intrachromosomal homoeologous recombination in Arabidopsis thaliana. Plant J 40:1007-1015
-
(2004)
Plant J
, vol.40
, pp. 1007-1015
-
-
Li, L.1
Santerre-Ayotte, S.2
Boivin, E.B.3
Jean, M.4
Belzile, F.5
-
65
-
-
17644398436
-
Uncoupling of the functions of the Arabidopsis VIP1 protein in transient and stable plant genetic transformation by Agrobacterium
-
Li J, Krichevsky A, Vaidya M, Tz fira T, Citovsky V (2005a) Uncoupling of the functions of the Arabidopsis VIP1 protein in transient and stable plant genetic transformation by Agrobacterium. Proc Natl Acad Sci USA 102:5733-5738
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 5733-5738
-
-
Li, J.1
Krichevsky, A.2
Vaidya, M.3
Tzfira, T.4
Citovsky, V.5
-
66
-
-
30044440535
-
Involvement of KU80 in T-DNA integration in plant cells
-
Li J, Vaidya M, White C, Vainstein A, Citovsky V, Tz fira T (2005b) Involvement of KU80 in T-DNA integration in plant cells. Proc Natl Acad Sci USA 102:19231-19236
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 19231-19236
-
-
Li, J.1
Vaidya, M.2
White, C.3
Vainstein, A.4
Citovsky, V.5
Tzfira, T.6
-
67
-
-
33644757635
-
The impact of sequence divergence and DNA mismatch repair on homeologous recombination in Arabidopsis
-
Li L, Jean M, Belzile F (2006) The impact of sequence divergence and DNA mismatch repair on homeologous recombination in Arabidopsis. Plant J 45:908-916
-
(2006)
Plant J
, vol.45
, pp. 908-916
-
-
Li, L.1
Jean, M.2
Belzile, F.3
-
68
-
-
79953796527
-
Homologous recombination in plants: An antireview
-
Lieberman-Lazarovich M, Levy AA (2011) Homologous recombination in plants: an antireview. Methods Mol Biol 701:51-65
-
(2011)
Methods Mol Biol
, vol.701
, pp. 51-65
-
-
Lieberman-Lazarovich, M.1
Levy, A.A.2
-
70
-
-
47349097567
-
Rapid "open-source" engineering of customized zinc-finger nucleases for highly Efficient gene modification
-
Maeder ML, Thibodeau-Beganny S, Osiak A, Wright DA, Anthony RM, Eichtinger M, Jiang T, Foley JE, Winfrey RJ, Townsend JA, Unger-Wallace E, Sander JD, Muller-Lerch F, Fu F, Pearlberg J, Gobel C, Dassie JP, Pruett-Miller SM, Porteus MH, Sgroi DC, Iafrate AJ, Dobbs D, McCray PB Jr, Cathomen T, Voytas DF, Joung JK (2008) Rapid "open-source" engineering of customized zinc-finger nucleases for highly Efficient gene modification. Mol Cell 31: 294-301
-
(2008)
Mol Cell
, vol.31
, pp. 294-301
-
-
Maeder, M.L.1
Thibodeau-Beganny, S.2
Osiak, A.3
Wright, D.A.4
Anthony, R.M.5
Eichtinger, M.6
Jiang, T.7
Foley, J.E.8
Winfrey, R.J.9
Townsend, J.A.10
Unger-Wallace, E.11
Sander, J.D.12
Muller-Lerch, F.13
Fu, F.14
Pearlberg, J.15
Gobel, C.16
Dassie, J.P.17
Pruett-Miller, S.M.18
Porteus, M.H.19
Sgroi, D.C.20
Iafrate, A.J.21
Dobbs, D.22
McCray Jr., P.B.23
Cathomen, T.24
Voytas, D.F.25
Joung, J.K.26
more..
-
71
-
-
70349146995
-
Oligomerized pool engineering (OPEN): An 'open-source' protocol for making customized zinc-finger arrays
-
Maeder ML, Thibodeau-Beganny S, Sander JD, Voytas DF, Joung JK (2009) Oligomerized pool engineering (OPEN): an 'open-source' protocol for making customized zinc-finger arrays. Nat Protoc 4:1471-1501
-
(2009)
Nat Protoc
, vol.4
, pp. 1471-1501
-
-
Maeder, M.L.1
Thibodeau-Beganny, S.2
Sander, J.D.3
Voytas, D.F.4
Joung, J.K.5
-
72
-
-
79961209746
-
Epigenetic control of Agrobacterium T-DNA integration
-
Magori S, Citovsky V (2011) Epigenetic control of Agrobacterium T-DNA integration. Biochim Biophys Acta 1809(8):388-394
-
(2011)
Biochim Biophys Acta 1809
, Issue.8
, pp. 388-394
-
-
Magori, S.1
Citovsky, V.2
-
73
-
-
79952302385
-
De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks
-
Mahfouz MM, Li L, Shamimuzzaman M, Wibowo A, Fang X, Zhu JK (2011) De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks. Proc Natl Acad Sci USA 108:2623-2628
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 2623-2628
-
-
Mahfouz, M.M.1
Li, L.2
Shamimuzzaman, M.3
Wibowo, A.4
Fang, X.5
Zhu, J.K.6
-
74
-
-
0026096528
-
T-DNA integration: A mode of illegitimate recombination in plants
-
Mayerhofer R, Koncz-Kalman Z, Nawrath C, Bakkeren G, Crameri A, Angelis K, Redei GP, Schell J, Hohn B, Koncz C (1991) T-DNA integration: a mode of illegitimate recombination in plants. EMBO J 10:697-704
-
(1991)
EMBO J
, vol.10
, pp. 697-704
-
-
Mayerhofer, R.1
Koncz-Kalman, Z.2
Nawrath, C.3
Bakkeren, G.4
Crameri, A.5
Angelis, K.6
Redei, G.P.7
Schell, J.8
Hohn, B.9
Koncz, C.10
-
75
-
-
0032875939
-
Prospects for the precise engineering of plant genomes by homologous recombination
-
Mengiste T, Paszkowski J (1999) Prospects for the precise engineering of plant genomes by homologous recombination. Biol Chem 380:749-758
-
(1999)
Biol Chem
, vol.380
, pp. 749-758
-
-
Mengiste, T.1
Paszkowski, J.2
-
76
-
-
0029240445
-
Targeted disruption of the TGA3 locus in Arabidopsis thaliana
-
Miao ZH, Lam E (1995) Targeted disruption of the TGA3 locus in Arabidopsis thaliana. Plant J 7:359-365
-
(1995)
Plant J
, vol.7
, pp. 359-365
-
-
Zh, M.1
Lam, E.2
-
77
-
-
2942657727
-
CENTRIN2 modulates homologous recombination and nucleotide excision repair in Arabidopsis
-
Molinier J, Ramos C, Fritsch O, Hohn B (2004) CENTRIN2 modulates homologous recombination and nucleotide excision repair in Arabidopsis. Plant Cell 16:1633-1643
-
(2004)
Plant Cell
, vol.16
, pp. 1633-1643
-
-
Molinier, J.1
Ramos, C.2
Fritsch, O.3
Hohn, B.4
-
78
-
-
78650739853
-
Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors
-
Morbitzer R, Romer P, Boch J, Lahaye T (2010) Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors. Proc Natl Acad Sci USA 107:21617-21622
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 21617-21622
-
-
Morbitzer, R.1
Romer, P.2
Boch, J.3
Lahaye, T.4
-
79
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
Moscou MJ, Bogdanove AJ (2009) A simple cipher governs DNA recognition by TAL effectors. Science 326:1501
-
(2009)
Science
, vol.326
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
80
-
-
0034681132
-
An Arabidopsis histone H2A mutant is de ficient in Agrobacterium T-DNA integration
-
Mysore KS, Nam J, Gelvin SB (2000) An Arabidopsis histone H2A mutant is de ficient in Agrobacterium T-DNA integration. Proc Natl Acad Sci USA 97:948-953
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 948-953
-
-
Mysore, K.S.1
Nam, J.2
Gelvin, S.B.3
-
81
-
-
0031105076
-
Differences in susceptibility of Arabidopsis ecotypes to crown gall disease may result from a de ficiency in T-DNA integration
-
Nam J, Matthysse AG, Gelvin SB (1997) Differences in susceptibility of Arabidopsis ecotypes to crown gall disease may result from a de ficiency in T-DNA integration. Plant Cell 9:317-333
-
(1997)
Plant Cell
, vol.9
, pp. 317-333
-
-
Nam, J.1
Matthysse, A.G.2
Gelvin, S.B.3
-
82
-
-
0033005219
-
Identification of T-DNA tagged Arabidopsis mutants that are resistant to transformation by Agrobacterium
-
Nam J, Mysore KS, Zheng C, Knue MK, Matthysse AG, Gelvin SB (1999) Identification of T-DNA tagged Arabidopsis mutants that are resistant to transformation by Agrobacterium. Mol Gen Genet 261:429-438
-
(1999)
Mol Gen Genet
, vol.261
, pp. 429-438
-
-
Nam, J.1
Mysore, K.S.2
Zheng, C.3
Knue, M.K.4
Matthysse, A.G.5
Gelvin, S.B.6
-
83
-
-
0032167761
-
Genetic ablation of flowers in transgenic Arabidopsis
-
Nilsson O, Wu E, Wolfe DS, Weigel D (1998) Genetic ablation of flowers in transgenic Arabidopsis. Plant J 15:799-804
-
(1998)
Plant J
, vol.15
, pp. 799-804
-
-
Nilsson, O.1
Wu, E.2
Wolfe, D.S.3
Weigel, D.4
-
84
-
-
0025183234
-
Extrachromosomal homologous recombination and gene targeting in plant cells after Agrobacterium mediated transformation
-
Offringa R, de Groot MJ, Haagsman HJ, Does MP, van den Elzen PJ, Hooykaas PJ (1990) Extrachromosomal homologous recombination and gene targeting in plant cells after Agrobacterium mediated transformation. EMBO J 9:3077-3084
-
(1990)
EMBO J
, vol.9
, pp. 3077-3084
-
-
Offringa, R.1
De Groot, M.J.2
Haagsman, H.J.3
Does, M.P.4
Van Den Elzen, P.J.5
Hooykaas, P.J.6
-
85
-
-
0027208594
-
Nonreciprocal homologous recombination between Agrobacterium transferred DNA and a plant chromosomal locus
-
Offringa R, Franke-van Dijk ME, De Groot MJ, van den Elzen PJ, Hooykaas PJ (1993) Nonreciprocal homologous recombination between Agrobacterium transferred DNA and a plant chromosomal locus. Proc Natl Acad Sci USA 90:7346-7350
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 7346-7350
-
-
Offringa, R.1
Franke-Van Dijk, M.E.2
De Groot, M.J.3
Van Den Elzen, P.J.4
Hooykaas, P.J.5
-
86
-
-
0035313435
-
Oligonucleotide-directed plant gene targeting
-
Oh TJ, May GD (2001) Oligonucleotide-directed plant gene targeting. Curr Opin Biotechnol 12:169-172
-
(2001)
Curr Opin Biotechnol
, vol.12
, pp. 169-172
-
-
Oh, T.J.1
May, G.D.2
-
87
-
-
1242298958
-
Chimeric RNA/DNA oligonucleotide-directed gene targeting in rice
-
Okuzaki A, Toriyama K (2004) Chimeric RNA/DNA oligonucleotide-directed gene targeting in rice. Plant Cell Rep 22:509-512
-
(2004)
Plant Cell Rep
, vol.22
, pp. 509-512
-
-
Okuzaki, A.1
Toriyama, K.2
-
88
-
-
11244260476
-
The effect of sequence divergence on recombination between direct repeats in Arabidopsis
-
Opperman R, Emmanuel E, Levy AA (2004) The effect of sequence divergence on recombination between direct repeats in Arabidopsis. Genetics 168:2207-2215
-
(2004)
Genetics
, vol.168
, pp. 2207-2215
-
-
Opperman, R.1
Emmanuel, E.2
Levy, A.A.3
-
89
-
-
0141681133
-
Different pathways of homologous recombination are used for the repair of double-strand breaks within tandemly arranged sequences in the plant genome
-
Orel N, Kyryk A, Puchta H (2003) Different pathways of homologous recombination are used for the repair of double-strand breaks within tandemly arranged sequences in the plant genome. Plant J 35:604-612
-
(2003)
Plant J
, vol.35
, pp. 604-612
-
-
Orel, N.1
Kyryk, A.2
Puchta, H.3
-
90
-
-
33751581302
-
Isolation and characterization of the RAD54 gene from Arabidopsis thaliana
-
Osakabe K, Abe K, Yoshioka T, Osakabe Y, Todoriki S, Ichikawa H, Hohn B, Toki S (2006) Isolation and characterization of the RAD54 gene from Arabidopsis thaliana. Plant J 48:827-842
-
(2006)
Plant J
, vol.48
, pp. 827-842
-
-
Osakabe, K.1
Abe, K.2
Yoshioka, T.3
Osakabe, Y.4
Todoriki, S.5
Ichikawa, H.6
Hohn, B.7
Toki, S.8
-
91
-
-
0023669148
-
Cell lineage ablation in transgenic mice by cell-specific expression of a toxin gene
-
Palmiter RD, Behringer RR, Quaife CJ, Maxwell F, Maxwell IH, Brinster RL (1987) Cell lineage ablation in transgenic mice by cell-specific expression of a toxin gene. Cell 50:435-443
-
(1987)
Cell
, vol.50
, pp. 435-443
-
-
Palmiter, R.D.1
Behringer, R.R.2
Quaife, C.J.3
Maxwell, F.4
Maxwell, I.H.5
Brinster, R.L.6
-
94
-
-
77949570007
-
New insights into an old story: Agrobacterium-induced tumour formation in plants by plant transformation
-
Pitzschke A, Hirt H (2010) New insights into an old story: Agrobacterium-induced tumour formation in plants by plant transformation. EMBO J 29:1021-1032
-
(2010)
EMBO J
, vol.29
, pp. 1021-1032
-
-
Pitzschke, A.1
Hirt, H.2
-
95
-
-
0026573892
-
Site-specific recombination determined by I-SceI, a mitochondrial group i intron-encoded endonuclease expressed in the yeast nucleus
-
Plessis A, Perrin A, Haber JE, Dujon B (1992) Site-specific recombination determined by I-SceI, a mitochondrial group I intron-encoded endonuclease expressed in the yeast nucleus. Genetics 130:451-460
-
(1992)
Genetics
, vol.130
, pp. 451-460
-
-
Plessis, A.1
Perrin, A.2
Haber, J.E.3
Dujon, B.4
-
96
-
-
0038523969
-
Chimeric nucleases stimulate gene targeting in human cells
-
Porteus MH, Baltimore D (2003) Chimeric nucleases stimulate gene targeting in human cells. Science 300:763
-
(2003)
Science
, vol.300
, pp. 763
-
-
Porteus, M.H.1
Baltimore, D.2
-
97
-
-
0025893887
-
A transient assay in plant cells reveals a positive correlation between extrachromosomal recombination rates and length of homologous overlap
-
Puchta H, Hohn B (1991) A transient assay in plant cells reveals a positive correlation between extrachromosomal recombination rates and length of homologous overlap. Nucleic Acids Res 19:2693-2700
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 2693-2700
-
-
Puchta, H.1
Hohn, B.2
-
98
-
-
24744460053
-
Green light for gene targeting in plants
-
Puchta H, Hohn B (2005) Green light for gene targeting in plants. Proc Natl Acad Sci USA 102:11961-11962
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 11961-11962
-
-
Puchta, H.1
Hohn, B.2
-
99
-
-
0027384567
-
Homologous recombination in plant cells is enhanced by in vivo induction of double strand breaks into DNA by a site-specific endonuclease
-
Puchta H, Dujon B, Hohn B (1993) Homologous recombination in plant cells is enhanced by in vivo induction of double strand breaks into DNA by a site-specific endonuclease. Nucleic Acids Res 21:5034-5040
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 5034-5040
-
-
Puchta, H.1
Dujon, B.2
Hohn, B.3
-
100
-
-
0029946668
-
Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination
-
Puchta H, Dujon B, Hohn B (1996) Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination. Proc Natl Acad Sci USA 93:5055-5060
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 5055-5060
-
-
Puchta, H.1
Dujon, B.2
Hohn, B.3
-
102
-
-
0034724291
-
RecA stimulates sister chromatid exchange and the fidelity of double-strand break repair, but not gene targeting, in plants transformed by Agrobacterium
-
Reiss B, Schubert I, Kopchen K, Wendeler E, Schell J, Puchta H (2000) RecA stimulates sister chromatid exchange and the fidelity of double-strand break repair, but not gene targeting, in plants transformed by Agrobacterium. Proc Natl Acad Sci USA 97:3358-3363
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 3358-3363
-
-
Reiss, B.1
Schubert, I.2
Kopchen, K.3
Wendeler, E.4
Schell, J.5
Puchta, H.6
-
103
-
-
37849032457
-
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants
-
Rensing SA, Lang D, Zimmer AD, Terry A, Salamov A, Shapiro H, Nishiyama T, Perroud PF, Lindquist EA, Kamisugi Y, Tanahashi T, Sakakibara K, Fujita T, Oishi K, Shin IT, Kuroki Y, Toyoda A, Suzuki Y, Hashimoto S, Yamaguchi K, Sugano S, Kohara Y, Fujiyama A, Anterola A, Aoki S, Ashton N, Barbazuk WB, Barker E, Bennetzen JL, Blankenship R, Cho SH, Dutcher SK, Estelle M, Fawcett JA, Gundlach H, Hanada K, Heyl A, Hicks KA, Hughes J, Lohr M, Mayer K, Melkozernov A, Murata T, Nelson DR, Pils B, Prigge M, Reiss B, Renner T, Rombauts S, Rushton PJ, Sanderfoot A, Schween G, Shiu SH, Stueber K, Theodoulou FL, Tu H, Van de Peer Y, Verrier PJ, Waters E, Wood A, Yang L, Cove D, Cuming AC, Hasebe M, Lucas S, Mishler BD, Reski R, Grigoriev IV, Quatrano RS, Boore JL (2008) The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319:64-69
-
(2008)
Science
, vol.319
, pp. 64-69
-
-
Rensing, S.A.1
Lang, D.2
Zimmer, A.D.3
Terry, A.4
Salamov, A.5
Shapiro, H.6
Nishiyama, T.7
Perroud, P.F.8
Lindquist, E.A.9
Kamisugi, Y.10
Tanahashi, T.11
Sakakibara, K.12
Fujita, T.13
Oishi, K.14
Shin, I.T.15
Kuroki, Y.16
Toyoda, A.17
Suzuki, Y.18
Hashimoto, S.19
Yamaguchi, K.20
Sugano, S.21
Kohara, Y.22
Fujiyama, A.23
Anterola, A.24
Aoki, S.25
Ashton, N.26
Barbazuk, W.B.27
Barker, E.28
Bennetzen, J.L.29
Blankenship, R.30
Cho, S.H.31
Dutcher, S.K.32
Estelle, M.33
Fawcett, J.A.34
Gundlach, H.35
Hanada, K.36
Heyl, A.37
Hicks, K.A.38
Hughes, J.39
Lohr, M.40
Mayer, K.41
Melkozernov, A.42
Murata, T.43
Nelson, D.R.44
Pils, B.45
Prigge, M.46
Reiss, B.47
Renner, T.48
Rombauts, S.49
Rushton, P.J.50
Sanderfoot, A.51
Schween, G.52
Shiu, S.H.53
Stueber, K.54
Theodoulou, F.L.55
Tu, H.56
Van De Peer, Y.57
Verrier, P.J.58
Waters, E.59
Wood, A.60
Yang, L.61
Cove, D.62
Cuming, A.C.63
Hasebe, M.64
Lucas, S.65
Mishler, B.D.66
Reski, R.67
Grigoriev, I.V.68
Quatrano, R.S.69
Boore, J.L.70
more..
-
104
-
-
0034045767
-
Genetic repair of mutations in plant cell-free extracts directed by specific chimeric oligonucleotides
-
Rice MC, May GD, Kipp PB, Parekh H, Kmiec EB (2000) Genetic repair of mutations in plant cell-free extracts directed by specific chimeric oligonucleotides. Plant Physiol 123:427-438
-
(2000)
Plant Physiol
, vol.123
, pp. 427-438
-
-
Rice, M.C.1
May, G.D.2
Kipp, P.B.3
Parekh, H.4
Kmiec, E.B.5
-
105
-
-
0029107293
-
Targeted recombination in plants using Agrobacterium coincides with additional rearrangements at the target locus
-
Risseeuw E, Offringa R, Franke-van Dijk ME, Hooykaas PJ (1995) Targeted recombination in plants using Agrobacterium coincides with additional rearrangements at the target locus. Plant J 7:109-119
-
(1995)
Plant J
, vol.7
, pp. 109-119
-
-
Risseeuw, E.1
Offringa, R.2
Franke-Van Dijk, M.E.3
Hooykaas, P.J.4
-
106
-
-
1642465435
-
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics
-
Rosso MG, Li Y, Strizhov N, Reiss B, Dekker K, Weisshaar B (2003) An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics. Plant Mol Biol 53:247-259
-
(2003)
Plant Mol Biol
, vol.53
, pp. 247-259
-
-
Rosso, M.G.1
Li, Y.2
Strizhov, N.3
Reiss, B.4
Dekker, K.5
Weisshaar, B.6
-
107
-
-
0025979877
-
Targeting, disruption, replacement, and allele rescue: Integrative DNA transformation in yeast
-
Rothstein R (1991) Targeting, disruption, replacement, and allele rescue: integrative DNA transformation in yeast. Methods Enzymol 194:281-301
-
(1991)
Methods Enzymol
, vol.194
, pp. 281-301
-
-
Rothstein, R.1
-
108
-
-
79959933646
-
Application of gene targeting to designed mutation breeding of high-tryptophan rice
-
Saika H, Oikawa A, Matsuda F, Onodera H, Saito K, Toki S (2011) Application of gene targeting to designed mutation breeding of high-tryptophan rice. Plant Physiol 156(3):1269-1277
-
(2011)
Plant Physiol
, vol.156
, Issue.3
, pp. 1269-1277
-
-
Saika, H.1
Oikawa, A.2
Matsuda, F.3
Onodera, H.4
Saito, K.5
Toki, S.6
-
109
-
-
0032531757
-
Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells
-
Salomon S, Puchta H (1998) Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells. EMBO J 17:6086-6095
-
(1998)
EMBO J
, vol.17
, pp. 6086-6095
-
-
Salomon, S.1
Puchta, H.2
-
110
-
-
78650863981
-
Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA)
-
Sander JD, Dahlborg EJ, Goodwin MJ, Cade L, Zhang F, Cifuentes D, Curtin SJ, Blackburn JS, Thibodeau-Beganny S, Qi Y, Pierick CJ, Hoffman E, Maeder ML, Khayter C, Reyon D, Dobbs D, Langenau DM, Stupar RM, Giraldez AJ, Voytas DF, Peterson RT, Yeh JR, Joung JK (2011) Selection-free zinc-finger-nuclease engineering by context-dependent assembly (CoDA). Nat Methods 8:67-69
-
(2011)
Nat Methods
, vol.8
, pp. 67-69
-
-
Sander, J.D.1
Dahlborg, E.J.2
Goodwin, M.J.3
Cade, L.4
Zhang, F.5
Cifuentes, D.6
Curtin, S.J.7
Blackburn, J.S.8
Thibodeau-Beganny, S.9
Qi, Y.10
Pierick, C.J.11
Hoffman, E.12
Maeder, M.L.13
Khayter, C.14
Reyon, D.15
Dobbs, D.16
Langenau, D.M.17
Stupar, R.M.18
Giraldez, A.J.19
Voytas, D.F.20
Peterson, R.T.21
Yeh, J.R.22
Joung, J.K.23
more..
-
111
-
-
0035115728
-
Gene targeting in Physcomitrella patens
-
Schaefer DG (2001) Gene targeting in Physcomitrella patens. Curr Opin Plant Biol 4:143-150
-
(2001)
Curr Opin Plant Biol
, vol.4
, pp. 143-150
-
-
Schaefer, D.G.1
-
112
-
-
0037004346
-
A new moss genetics: Targeted mutagenesis in Physcomitrella patens
-
Schaefer DG (2002) A new moss genetics: targeted mutagenesis in Physcomitrella patens. Annu Rev Plant Biol 53:477-501
-
(2002)
Annu Rev Plant Biol
, vol.53
, pp. 477-501
-
-
Schaefer, D.G.1
-
113
-
-
0031170922
-
Efficient gene targeting in the moss Physcomitrella patens
-
Schaefer DG, Zryd JP (1997) Efficient gene targeting in the moss Physcomitrella patens. Plant J 11:1195-1206
-
(1997)
Plant J
, vol.11
, pp. 1195-1206
-
-
Schaefer, D.G.1
Zryd, J.P.2
-
114
-
-
85047684536
-
The moss Physcomitrella patens, now and then
-
Schaefer DG, Zryd JP (2001) The moss Physcomitrella patens, now and then. Plant Physiol 127:1430-1438
-
(2001)
Plant Physiol
, vol.127
, pp. 1430-1438
-
-
Schaefer, D.G.1
Zryd, J.P.2
-
116
-
-
77952323648
-
RAD51 loss of function abolishes gene targeting and de-represses illegitimate integration in the moss Physcomitrella patens
-
Schaefer DG, Delacote F, Charlot F, Vrielynck N, Guyon-Debast A, Le Guin S, Neuhaus JM, Doutriaux MP, Nogue F (2010) RAD51 loss of function abolishes gene targeting and de-represses illegitimate integration in the moss Physcomitrella patens. DNA Repair (Amst) 9:526-533
-
(2010)
DNA Repair (Amst)
, vol.9
, pp. 526-533
-
-
Schaefer, D.G.1
Delacote, F.2
Charlot, F.3
Vrielynck, N.4
Guyon-Debast, A.5
Le Guin, S.6
Neuhaus, J.M.7
Doutriaux, M.P.8
Nogue, F.9
-
117
-
-
0036910328
-
A high-throughput Arabidopsis reverse genetics system
-
Sessions A, Burke E, Presting G, Aux G, McElver J, Patton D, Dietrich B, Ho P, Bacwaden J, Ko C, Clarke JD, Cotton D, Bullis D, Snell J, Miguel T, Hutchison D, Kimmerly B, Mitzel T, Katagiri F, Glazebrook J, Law M, Goff SA (2002) A high-throughput Arabidopsis reverse genetics system. Plant Cell 14:2985-2994
-
(2002)
Plant Cell
, vol.14
, pp. 2985-2994
-
-
Sessions, A.1
Burke, E.2
Presting, G.3
Aux, G.4
McElver, J.5
Patton, D.6
Dietrich, B.7
Ho, P.8
Bacwaden, J.9
Ko, C.10
Clarke, J.D.11
Cotton, D.12
Bullis, D.13
Snell, J.14
Miguel, T.15
Hutchison, D.16
Kimmerly, B.17
Mitzel, T.18
Katagiri, F.19
Glazebrook, J.20
Law, M.21
Goff, S.A.22
more..
-
118
-
-
24744454355
-
High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene
-
Shaked H, Melamed-Bessudo C, Levy AA (2005) High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene. Proc Natl Acad Sci USA 102:12265-12269
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 12265-12269
-
-
Shaked, H.1
Melamed-Bessudo, C.2
Levy, A.A.3
-
119
-
-
33745351544
-
Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination
-
Shaked H, Avivi-Ragolsky N, Levy AA (2006) Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination. Genetics 173:985-994
-
(2006)
Genetics
, vol.173
, pp. 985-994
-
-
Shaked, H.1
Avivi-Ragolsky, N.2
Levy, A.A.3
-
120
-
-
0033595006
-
Stimulation of homologous recombination in plants by expression of the bacterial resolvase ruvC
-
Shalev G, Sitrit Y, Avivi-Ragolski N, Lichtenstein C, Levy AA (1999) Stimulation of homologous recombination in plants by expression of the bacterial resolvase ruvC. Proc Natl Acad Sci USA 96:7398-7402
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 7398-7402
-
-
Shalev, G.1
Sitrit, Y.2
Avivi-Ragolski, N.3
Lichtenstein, C.4
Levy, A.A.5
-
121
-
-
66249147273
-
Precise genome modification in the crop species Zea mays using zincfinger nucleases
-
Shukla VK, Doyon Y, Miller JC, DeKelver RC, Moehle EA, Worden SE, Mitchell JC, Arnold NL, Gopalan S, Meng X, Choi VM, Rock JM, Wu YY, Katibah GE, Zhifang G, McCaskill D, Simpson MA, Blakeslee B, Greenwalt SA, Butler HJ, Hinkley SJ, Zhang L, Rebar EJ, Gregory PD, Urnov FD (2009) Precise genome modification in the crop species Zea mays using zincfinger nucleases. Nature 459:437-441
-
(2009)
Nature
, vol.459
, pp. 437-441
-
-
Shukla, V.K.1
Doyon, Y.2
Miller, J.C.3
Dekelver, R.C.4
Moehle, E.A.5
Worden, S.E.6
Mitchell, J.C.7
Arnold, N.L.8
Gopalan, S.9
Meng, X.10
Choi, V.M.11
Rock, J.M.12
Wu, Y.Y.13
Katibah, G.E.14
Zhifang, G.15
McCaskill, D.16
Simpson, M.A.17
Blakeslee, B.18
Greenwalt, S.A.19
Butler, H.J.20
Hinkley, S.J.21
Zhang, L.22
Rebar, E.J.23
Gregory, P.D.24
Urnov, F.D.25
more..
-
122
-
-
11144358325
-
BRU1, a novel link between responses to DNA damage and epigenetic gene silencing in Arabidopsis
-
Takeda S, Tadele Z, Hofmann I, Probst AV, Angelis KJ, Kaya H, Araki T, Mengiste T, Mittelsten Scheid O, Shibahara K, Scheel D, Paszkowski J (2004) BRU1, a novel link between responses to DNA damage and epigenetic gene silencing in Arabidopsis. Genes Dev 18:782-793
-
(2004)
Genes Dev
, vol.18
, pp. 782-793
-
-
Takeda, S.1
Tadele, Z.2
Hofmann, I.3
Probst, A.V.4
Angelis, K.J.5
Kaya, H.6
Araki, T.7
Mengiste, T.8
Mittelsten Scheid, O.9
Shibahara, K.10
Scheel, D.11
Paszkowski, J.12
-
123
-
-
77952741351
-
High Efficient gene targeting on the AGAMOUS gene in an ArabidopsisAtLIG4 mutant
-
Tanaka S, Ishii C, Hatakeyama S, Inoue H (2010) High Efficient gene targeting on the AGAMOUS gene in an ArabidopsisAtLIG4 mutant. Biochem Biophys Res Commun 396:289-293
-
(2010)
Biochem Biophys Res Commun
, vol.396
, pp. 289-293
-
-
Tanaka, S.1
Ishii, C.2
Hatakeyama, S.3
Inoue, H.4
-
124
-
-
72049115218
-
Overexpression of several Arabidopsis histone genes increases agrobacterium-mediated transformation and transgene expression in plants
-
Tenea GN, Spantzel J, Lee LY, Zhu Y, Lin K, Johnson SJ, Gelvin SB (2009) Overexpression of several Arabidopsis histone genes increases agrobacterium-mediated transformation and transgene expression in plants. Plant Cell 21:3350-3367
-
(2009)
Plant Cell
, vol.21
, pp. 3350-3367
-
-
Tenea, G.N.1
Spantzel, J.2
Lee, L.Y.3
Zhu, Y.4
Lin, K.5
Johnson, S.J.6
Gelvin, S.B.7
-
125
-
-
0036787546
-
Efficient gene targeting by homologous recombination in rice
-
Terada R, Urawa H, Inagaki Y, Tsugane K, Iida S (2002) Efficient gene targeting by homologous recombination in rice. Nat Biotechnol 20:1030-1034
-
(2002)
Nat Biotechnol
, vol.20
, pp. 1030-1034
-
-
Terada, R.1
Urawa, H.2
Inagaki, Y.3
Tsugane, K.4
Iida, S.5
-
126
-
-
1842720144
-
A large-scale Agrobacterium-mediated transformation procedure with a strong positive-negative selection for gene targeting in rice (Oryza sativa L.)
-
Terada R, Asao H, Iida S (2004) A large-scale Agrobacterium-mediated transformation procedure with a strong positive-negative selection for gene targeting in rice (Oryza sativa L.). Plant Cell Rep 22:653-659
-
(2004)
Plant Cell Rep
, vol.22
, pp. 653-659
-
-
Terada, R.1
Asao, H.2
Iida, S.3
-
127
-
-
0026069345
-
A Brassica S-locus gene promoter targets toxic gene expression and cell death to the pistil and pollen of transgenic Nicotiana
-
Thorsness MK, Kandasamy MK, Nasrallah ME, Nasrallah JB (1991) A Brassica S-locus gene promoter targets toxic gene expression and cell death to the pistil and pollen of transgenic Nicotiana. Dev Biol 143:173-184
-
(1991)
Dev Biol
, vol.143
, pp. 173-184
-
-
Thorsness, M.K.1
Kandasamy, M.K.2
Nasrallah, M.E.3
Nasrallah, J.B.4
-
128
-
-
0031282664
-
Gene targeting approaches using positive-negative selection and large flanking regions
-
Thykjaer T, Finnemann J, Schauser L, Christensen L, Poulsen C, Stougaard J (1997) Gene targeting approaches using positive-negative selection and large flanking regions. Plant Mol Biol 35: 523-530
-
(1997)
Plant Mol Biol
, vol.35
, pp. 523-530
-
-
Thykjaer, T.1
Finnemann, J.2
Schauser, L.3
Christensen, L.4
Poulsen, C.5
Stougaard, J.6
-
129
-
-
0033213398
-
Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: A tool for functional genomics
-
Tissier AF, Marillonnet S, Klimyuk V, Patel K, Torres MA, Murphy G, Jones JD (1999) Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: a tool for functional genomics. Plant Cell 11:1841-1852
-
(1999)
Plant Cell
, vol.11
, pp. 1841-1852
-
-
Tissier, A.F.1
Marillonnet, S.2
Klimyuk, V.3
Patel, K.4
Torres, M.A.5
Murphy, G.6
Jones, J.D.7
-
130
-
-
66249093890
-
High-frequency modification of plant genes using engineered zinc-finger nucleases
-
Townsend JA, Wright DA, Winfrey RJ, Fu F, Maeder ML, Joung JK, Voytas DF (2009) High-frequency modification of plant genes using engineered zinc-finger nucleases. Nature 459:442-445
-
(2009)
Nature
, vol.459
, pp. 442-445
-
-
Townsend, J.A.1
Wright, D.A.2
Winfrey, R.J.3
Fu, F.4
Maeder, M.L.5
Joung, J.K.6
Voytas, D.F.7
-
131
-
-
31544454209
-
MSH2 is essential for the preservation of genome integrity and prevents homeologous recombination in the moss Physcomitrella patens
-
Trouiller B, Schaefer DG, Charlot F, Nogue F (2006) MSH2 is essential for the preservation of genome integrity and prevents homeologous recombination in the moss Physcomitrella patens. Nucleic Acids Res 34:232-242
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 232-242
-
-
Trouiller, B.1
Schaefer, D.G.2
Charlot, F.3
Nogue, F.4
-
132
-
-
34548139408
-
Comparison of gene targeting Efficiencies in two mosses suggests that it is a conserved feature of Bryophyte transformation
-
Trouiller B, Charlot F, Choinard S, Schaefer DG, Nogue F (2007) Comparison of gene targeting Efficiencies in two mosses suggests that it is a conserved feature of Bryophyte transformation. Biotechnol Lett 29:1591-1598
-
(2007)
Biotechnol Lett
, vol.29
, pp. 1591-1598
-
-
Trouiller, B.1
Charlot, F.2
Choinard, S.3
Schaefer, D.G.4
Nogue, F.5
-
133
-
-
33645945885
-
Agrobacterium-mediated genetic transformation of plants: Biology and biotechnology
-
Tzfira T, Citovsky V (2006) Agrobacterium-mediated genetic transformation of plants: biology and biotechnology. Curr Opin Biotechnol 17:147-154
-
(2006)
Curr Opin Biotechnol
, vol.17
, pp. 147-154
-
-
Tzfira, T.1
Citovsky, V.2
-
134
-
-
27944487465
-
Towards targeted mutagenesis and gene replacement in plants
-
Tzfira T, White C (2005) Towards targeted mutagenesis and gene replacement in plants. Trends Biotechnol 23:567-569
-
(2005)
Trends Biotechnol
, vol.23
, pp. 567-569
-
-
Tzfira, T.1
White, C.2
-
135
-
-
77955867185
-
Genome editing with engineered zinc finger nucleases
-
Urnov FD, Rebar EJ, Holmes MC, Zhang HS, Gregory PD (2010) Genome editing with engineered zinc finger nucleases. Nat Rev Genet 11:636-646
-
(2010)
Nat Rev Genet
, vol.11
, pp. 636-646
-
-
Urnov, F.D.1
Rebar, E.J.2
Holmes, M.C.3
Zhang, H.S.4
Gregory, P.D.5
-
136
-
-
0037329774
-
Genetic requirements for the targeted integration of Agrobacterium T-DNA in Saccharomyces cerevisiae
-
van Attikum H, Hooykaas PJ (2003) Genetic requirements for the targeted integration of Agrobacterium T-DNA in Saccharomyces cerevisiae. Nucleic Acids Res 31:826-832
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 826-832
-
-
Van Attikum, H.1
Hooykaas, P.J.2
-
137
-
-
0035890166
-
Non-homologous end-joining proteins are required for Agrobacterium T-DNA integration
-
van Attikum H, Bundock P, Hooykaas PJ (2001) Non-homologous end-joining proteins are required for Agrobacterium T-DNA integration. EMBO J 20:6550-6558
-
(2001)
EMBO J
, vol.20
, pp. 6550-6558
-
-
Van Attikum, H.1
Bundock, P.2
Hooykaas, P.J.3
-
138
-
-
0242349117
-
The Arabidopsis AtLIG4 gene is required for the repair of DNA damage, but not for the integration of Agrobacterium T-DNA
-
van Attikum H, Bundock P, Overmeer RM, Lee LY, Gelvin SB, Hooykaas PJ (2003) The Arabidopsis AtLIG4 gene is required for the repair of DNA damage, but not for the integration of Agrobacterium T-DNA. Nucleic Acids Res 31:4247-4255
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4247-4255
-
-
Van Attikum, H.1
Bundock, P.2
Overmeer, R.M.3
Lee, L.Y.4
Gelvin, S.B.5
Hooykaas, P.J.6
-
140
-
-
61349090428
-
Characterisation of a new reporter system allowing high throughput in planta screening for recombination events before and after controlled DNA double strand break induction
-
Wehrkamp-Richter S, Degroote F, Laffaire JB, Paul W, Perez P, Picard G (2009) Characterisation of a new reporter system allowing high throughput in planta screening for recombination events before and after controlled DNA double strand break induction. Plant Physiol Biochem 47:248-255
-
(2009)
Plant Physiol Biochem
, vol.47
, pp. 248-255
-
-
Wehrkamp-Richter, S.1
Degroote, F.2
Laffaire, J.B.3
Paul, W.4
Perez, P.5
Picard, G.6
-
142
-
-
33644693285
-
High-frequency homologous recombination in plants mediated by zinc-finger nucleases
-
Wright DA, Townsend JA, Winfrey RJ Jr, Irwin PA, Rajagopal J, Lonosky PM, Hall BD, Jondle MD, Voytas DF (2005) High-frequency homologous recombination in plants mediated by zinc-finger nucleases. Plant J 44:693-705
-
(2005)
Plant J
, vol.44
, pp. 693-705
-
-
Wright, D.A.1
Townsend, J.A.2
Winfrey Jr., R.J.3
Irwin, P.A.4
Rajagopal, J.5
Lonosky, P.M.6
Hall, B.D.7
Jondle, M.D.8
Voytas, D.F.9
-
143
-
-
34248220864
-
Standardized reagents and protocols for engineering zinc finger nucleases by modular assembly
-
Wright DA, Thibodeau-Beganny S, Sander JD, Winfrey RJ, Hirsh AS, Eichtinger M, Fu F, Porteus MH, Dobbs D, Voytas DF, Joung JK (2006) Standardized reagents and protocols for engineering zinc finger nucleases by modular assembly. Nat Protoc 1:1637-1652
-
(2006)
Nat Protoc
, vol.1
, pp. 1637-1652
-
-
Wright, D.A.1
Thibodeau-Beganny, S.2
Sander, J.D.3
Winfrey, R.J.4
Hirsh, A.S.5
Eichtinger, M.6
Fu, F.7
Porteus, M.H.8
Dobbs, D.9
Voytas, D.F.10
Joung, J.K.11
-
144
-
-
0035844993
-
Positive-Negative selection for homologous recombination in Arabidopsis
-
Xiaohui Wang H (2001) Positive-Negative selection for homologous recombination in Arabidopsis. Gene 272:249-255
-
(2001)
Gene
, vol.272
, pp. 249-255
-
-
Xiaohui Wang, H.1
-
145
-
-
70349868188
-
Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice
-
Yamauchi T, Johzuka-Hisatomi Y, Fukada-Tanaka S, Terada R, Nakamura I, Iida S (2009) Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice. Plant J 60:386-396
-
(2009)
Plant J
, vol.60
, pp. 386-396
-
-
Yamauchi, T.1
Johzuka-Hisatomi, Y.2
Fukada-Tanaka, S.3
Terada, R.4
Nakamura, I.5
Iida, S.6
-
146
-
-
33745793384
-
Constitutive expression exposes functional redundancy between the Arabidopsis histone H2A gene HTA1 and other H2A gene family members
-
Yi H, Sardesai N, Fujinuma T, Chan CW, Veena HJ, Gelvin SB (2006) Constitutive expression exposes functional redundancy between the Arabidopsis histone H2A gene HTA1 and other H2A gene family members. Plant Cell 18:1575-89
-
(2006)
Plant Cell
, vol.18
, pp. 1575-1589
-
-
Yi, H.1
Sardesai, N.2
Fujinuma, T.3
Chan, C.W.4
Veena, H.J.5
Gelvin, S.B.6
-
147
-
-
64749088622
-
Epigenetic regulation, somatic homologous recombination, and abscisic acid signaling are in fluenced by DNA polymerase epsilon mutation in Arabidopsis
-
Yin H, Zhang X, Liu J, Wang Y, He J, Yang T, Hong X, Yang Q, Gong Z (2009) Epigenetic regulation, somatic homologous recombination, and abscisic acid signaling are in fluenced by DNA polymerase epsilon mutation in Arabidopsis. Plant Cell 21:386-402
-
(2009)
Plant Cell
, vol.21
, pp. 386-402
-
-
Yin, H.1
Zhang, X.2
Liu, J.3
Wang, Y.4
He, J.5
Yang, T.6
Hong, X.7
Yang, Q.8
Gong, Z.9
-
148
-
-
79953783824
-
Targeted mutagenesis in Arabidopsis using zinc-finger nucleases
-
Zhang F, Voytas DF (2011) Targeted mutagenesis in Arabidopsis using zinc-finger nucleases. Methods Mol Biol 701:167-177
-
(2011)
Methods Mol Biol
, vol.701
, pp. 167-177
-
-
Zhang, F.1
Voytas, D.F.2
-
149
-
-
77955395799
-
High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases
-
Zhang F, Maeder ML, Unger-Wallace E, Hoshaw JP, Reyon D, Christian M, Li X, Pierick CJ, Dobbs D, Peterson T, Joung JK, Voytas DF (2010) High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases. Proc Natl Acad Sci USA 107:12028-12033
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 12028-12033
-
-
Zhang, F.1
Maeder, M.L.2
Unger-Wallace, E.3
Hoshaw, J.P.4
Reyon, D.5
Christian, M.6
Li, X.7
Pierick, C.J.8
Dobbs, D.9
Peterson, T.10
Joung, J.K.11
Voytas, D.F.12
-
150
-
-
79751487297
-
Efficient construction of sequencespecific TAL effectors for modulating mammalian transcription
-
Zhang F, Cong L, Lodato S, Kosuri S, Church GM, Arlotta P (2011) Efficient construction of sequencespecific TAL effectors for modulating mammalian transcription. Nat Biotechnol 29:149-153
-
(2011)
Nat Biotechnol
, vol.29
, pp. 149-153
-
-
Zhang, F.1
Cong, L.2
Lodato, S.3
Kosuri, S.4
Church, G.M.5
Arlotta, P.6
-
151
-
-
68449100993
-
Expression of the Arabidopsis thaliana histone gene AtHTA1 enhances rice transformation Efficiency
-
Zheng Y, He XW, Ying YH, Lu JF, Gelvin SB, Shou HX (2009) Expression of the Arabidopsis thaliana histone gene AtHTA1 enhances rice transformation Efficiency. Mol Plant 2:832-837
-
(2009)
Mol Plant
, vol.2
, pp. 832-837
-
-
Zheng, Y.1
He, X.W.2
Ying, Y.H.3
Lu, J.F.4
Gelvin, S.B.5
Shou, H.X.6
-
152
-
-
0033587695
-
Targeted manipulation of maize genes in vivo using chimeric RNA/DNA oligonucleotides
-
Zhu T, Peterson DJ, Tagliani L, St Clair G, Baszczynski CL, Bowen B (1999) Targeted manipulation of maize genes in vivo using chimeric RNA/DNA oligonucleotides. Proc Natl Acad Sci USA 96:8768-8773
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 8768-8773
-
-
Zhu, T.1
Peterson, D.J.2
Tagliani, L.3
St Clair, G.4
Baszczynski, C.L.5
Bowen, B.6
-
153
-
-
0034122866
-
Engineering herbicideresistant maize using chimeric RNA/DNA oligonucleotides
-
Zhu T, Mettenburg K, Peterson DJ, Tagliani L, Baszczynski CL (2000) Engineering herbicideresistant maize using chimeric RNA/DNA oligonucleotides. Nat Biotechnol 18:555-558
-
(2000)
Nat Biotechnol
, vol.18
, pp. 555-558
-
-
Zhu, T.1
Mettenburg, K.2
Peterson, D.J.3
Tagliani, L.4
Baszczynski, C.L.5
-
154
-
-
0037783253
-
Identification of Arabidopsis rat mutants
-
Zhu Y, Nam J, Humara JM, Mysore KS, Lee LY, Cao H, Valentine L, Li J, Kaiser AD, Kopecky AL, Hwang HH, Bhattacharjee S, Rao PK, Tzfira T, Rajagopal J, Yi H, Veena HJ, Yadav BS, Crane YM, Lin K, Larcher Y, Gelvin MJ, Knue M, Ramos C, Zhao X, Davis SJ, Kim SI, Ranjith-Kumar CT, Choi YJ, Hallan VK, Chattopadhyay S, Sui X, Ziemienowicz A, Matthysse AG, Citovsky V, Hohn B, Gelvin SB (2003) Identification of Arabidopsis rat mutants. Plant Physiol 132:494-505
-
(2003)
Plant Physiol
, vol.132
, pp. 494-505
-
-
Zhu, Y.1
Nam, J.2
Humara, J.M.3
Mysore, K.S.4
Lee, L.Y.5
Cao, H.6
Valentine, L.7
Li, J.8
Kaiser, A.D.9
Kopecky, A.L.10
Hwang, H.H.11
Bhattacharjee, S.12
Rao, P.K.13
Tzfira, T.14
Rajagopal, J.15
Yi, H.16
Veena, H.J.17
Yadav, B.S.18
Crane, Y.M.19
Lin, K.20
Larcher, Y.21
Gelvin, M.J.22
Knue, M.23
Ramos, C.24
Zhao, X.25
Davis, S.J.26
Kim, S.I.27
Ranjith-Kumar, C.T.28
Choi, Y.J.29
Hallan, V.K.30
Chattopadhyay, S.31
Sui, X.32
Ziemienowicz, A.33
Matthysse, A.G.34
Citovsky, V.35
Hohn, B.36
Gelvin, S.B.37
more..
-
155
-
-
0033842945
-
Plant enzymes but not Agrobacterium VirD2 mediate T-DNA ligation in vitro
-
Ziemienowicz A, Tinland B, Bryant J, Gloeckler V, Hohn B (2000) Plant enzymes but not Agrobacterium VirD2 mediate T-DNA ligation in vitro. Mol Cell Biol 20:6317-6322
-
(2000)
Mol Cell Biol
, vol.20
, pp. 6317-6322
-
-
Ziemienowicz, A.1
Tinland, B.2
Bryant, J.3
Gloeckler, V.4
Hohn, B.5
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